Multiple sequence alignment - TraesCS4A01G354000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G354000 chr4A 100.000 3196 0 0 1 3196 628700736 628697541 0.000000e+00 5903
1 TraesCS4A01G354000 chr4A 95.652 345 13 2 1 344 15970326 15969983 1.300000e-153 553
2 TraesCS4A01G354000 chr4A 95.376 346 15 1 1 345 513081989 513082334 1.680000e-152 549
3 TraesCS4A01G354000 chr4A 86.435 317 33 3 1117 1432 628698739 628699046 3.950000e-89 339
4 TraesCS4A01G354000 chr4A 80.201 298 52 6 1696 1989 703336050 703335756 1.930000e-52 217
5 TraesCS4A01G354000 chr7B 91.531 862 73 0 1128 1989 356763362 356762501 0.000000e+00 1188
6 TraesCS4A01G354000 chr5B 91.096 876 59 8 1125 1986 642693035 642693905 0.000000e+00 1168
7 TraesCS4A01G354000 chr5B 88.657 335 21 10 793 1111 681700045 681699712 2.990000e-105 392
8 TraesCS4A01G354000 chr5B 85.209 311 34 4 1689 1990 642693341 642693034 3.100000e-80 309
9 TraesCS4A01G354000 chr5B 86.111 180 21 4 1124 1301 78742385 78742208 1.170000e-44 191
10 TraesCS4A01G354000 chr5B 77.929 367 39 18 2103 2433 681699529 681699169 1.170000e-44 191
11 TraesCS4A01G354000 chr5B 76.897 290 51 15 1123 1403 256597434 256597152 1.990000e-32 150
12 TraesCS4A01G354000 chr5B 89.076 119 13 0 638 756 435066154 435066036 7.140000e-32 148
13 TraesCS4A01G354000 chr1B 90.794 869 48 10 1125 1992 648024969 648024132 0.000000e+00 1133
14 TraesCS4A01G354000 chr1B 81.481 243 39 6 1752 1991 482482928 482482689 9.050000e-46 195
15 TraesCS4A01G354000 chr6B 88.188 872 85 10 1125 1986 511426060 511426923 0.000000e+00 1024
16 TraesCS4A01G354000 chr6B 85.852 311 33 4 1689 1989 511426369 511426060 1.430000e-83 320
17 TraesCS4A01G354000 chr6B 81.633 245 36 7 1751 1990 696293047 696292807 9.050000e-46 195
18 TraesCS4A01G354000 chr5D 88.690 840 58 15 2391 3196 539721048 539721884 0.000000e+00 990
19 TraesCS4A01G354000 chr5D 87.382 531 28 19 1347 1838 299933999 299934529 9.940000e-160 573
20 TraesCS4A01G354000 chr5D 87.356 435 21 13 1990 2396 539718426 539718854 4.830000e-128 468
21 TraesCS4A01G354000 chr5D 90.173 346 30 3 1 344 412201419 412201762 6.290000e-122 448
22 TraesCS4A01G354000 chr5D 82.026 306 27 10 1127 1432 299934650 299934373 5.330000e-58 235
23 TraesCS4A01G354000 chr5D 94.702 151 5 1 964 1111 539718257 539718407 6.890000e-57 231
24 TraesCS4A01G354000 chr2B 98.956 383 3 1 1608 1990 600483326 600482945 0.000000e+00 684
25 TraesCS4A01G354000 chr2B 80.201 298 54 5 1128 1423 741233283 741232989 5.370000e-53 219
26 TraesCS4A01G354000 chr2B 79.153 307 56 8 1128 1430 741203566 741203264 4.180000e-49 206
27 TraesCS4A01G354000 chr1A 88.023 526 51 6 1477 1992 300002198 300001675 2.110000e-171 612
28 TraesCS4A01G354000 chr1A 97.674 344 8 0 1 344 490889875 490889532 2.750000e-165 592
29 TraesCS4A01G354000 chr1A 95.072 345 16 1 1 344 508121445 508121101 2.800000e-150 542
30 TraesCS4A01G354000 chr1A 95.072 345 16 1 1 344 586664078 586663734 2.800000e-150 542
31 TraesCS4A01G354000 chr1A 84.713 157 13 6 1689 1835 300002561 300002716 2.570000e-31 147
32 TraesCS4A01G354000 chr5A 97.093 344 10 0 1 344 459344789 459345132 5.940000e-162 580
33 TraesCS4A01G354000 chr2A 96.286 350 13 0 1 350 61815871 61815522 2.760000e-160 575
34 TraesCS4A01G354000 chr2A 95.429 350 15 1 2 350 59987081 59986732 1.000000e-154 556
35 TraesCS4A01G354000 chr7A 78.125 320 48 17 1121 1429 85439885 85440193 1.960000e-42 183


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G354000 chr4A 628697541 628700736 3195 True 5903.0 5903 100.000000 1 3196 1 chr4A.!!$R2 3195
1 TraesCS4A01G354000 chr7B 356762501 356763362 861 True 1188.0 1188 91.531000 1128 1989 1 chr7B.!!$R1 861
2 TraesCS4A01G354000 chr5B 642693035 642693905 870 False 1168.0 1168 91.096000 1125 1986 1 chr5B.!!$F1 861
3 TraesCS4A01G354000 chr5B 681699169 681700045 876 True 291.5 392 83.293000 793 2433 2 chr5B.!!$R5 1640
4 TraesCS4A01G354000 chr1B 648024132 648024969 837 True 1133.0 1133 90.794000 1125 1992 1 chr1B.!!$R2 867
5 TraesCS4A01G354000 chr6B 511426060 511426923 863 False 1024.0 1024 88.188000 1125 1986 1 chr6B.!!$F1 861
6 TraesCS4A01G354000 chr5D 299933999 299934529 530 False 573.0 573 87.382000 1347 1838 1 chr5D.!!$F1 491
7 TraesCS4A01G354000 chr5D 539718257 539721884 3627 False 563.0 990 90.249333 964 3196 3 chr5D.!!$F3 2232
8 TraesCS4A01G354000 chr1A 300001675 300002198 523 True 612.0 612 88.023000 1477 1992 1 chr1A.!!$R1 515


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 345 0.105401 TATGTATGGACCGGCCCTGA 60.105 55.0 8.77 0.0 34.97 3.86 F
569 570 0.106769 TGGCACAAGTTCCAAGAGCA 60.107 50.0 0.00 0.0 31.92 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2095 2170 0.243365 TTTTCCAATTCGCAGCGCAT 59.757 45.0 10.87 0.56 0.0 4.73 R
2478 4856 0.586802 GAACGGACCACTTGCAGTTC 59.413 55.0 0.00 0.00 0.0 3.01 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.685276 TTTGGTGATATGTCTTCTGAAATATGT 57.315 29.630 0.00 0.00 34.23 2.29
31 32 9.685276 TTGGTGATATGTCTTCTGAAATATGTT 57.315 29.630 0.00 0.00 34.23 2.71
32 33 9.685276 TGGTGATATGTCTTCTGAAATATGTTT 57.315 29.630 0.00 0.00 34.23 2.83
40 41 9.942850 TGTCTTCTGAAATATGTTTATCAGTGA 57.057 29.630 0.00 0.00 0.00 3.41
53 54 8.731275 TGTTTATCAGTGAGAAAAGAAAGTGA 57.269 30.769 14.22 0.00 0.00 3.41
54 55 9.173021 TGTTTATCAGTGAGAAAAGAAAGTGAA 57.827 29.630 14.22 0.00 0.00 3.18
57 58 9.613428 TTATCAGTGAGAAAAGAAAGTGAAAGA 57.387 29.630 0.00 0.00 0.00 2.52
58 59 7.921786 TCAGTGAGAAAAGAAAGTGAAAGAA 57.078 32.000 0.00 0.00 0.00 2.52
59 60 8.335532 TCAGTGAGAAAAGAAAGTGAAAGAAA 57.664 30.769 0.00 0.00 0.00 2.52
60 61 8.792633 TCAGTGAGAAAAGAAAGTGAAAGAAAA 58.207 29.630 0.00 0.00 0.00 2.29
61 62 9.410556 CAGTGAGAAAAGAAAGTGAAAGAAAAA 57.589 29.630 0.00 0.00 0.00 1.94
62 63 9.411801 AGTGAGAAAAGAAAGTGAAAGAAAAAC 57.588 29.630 0.00 0.00 0.00 2.43
63 64 9.191995 GTGAGAAAAGAAAGTGAAAGAAAAACA 57.808 29.630 0.00 0.00 0.00 2.83
64 65 9.410556 TGAGAAAAGAAAGTGAAAGAAAAACAG 57.589 29.630 0.00 0.00 0.00 3.16
65 66 9.411801 GAGAAAAGAAAGTGAAAGAAAAACAGT 57.588 29.630 0.00 0.00 0.00 3.55
90 91 9.760660 GTATATTATTGCTACTTTATGCACTGC 57.239 33.333 0.00 0.00 39.05 4.40
91 92 3.680642 ATTGCTACTTTATGCACTGCG 57.319 42.857 0.00 0.00 39.05 5.18
92 93 2.378445 TGCTACTTTATGCACTGCGA 57.622 45.000 0.00 0.00 33.94 5.10
93 94 2.694213 TGCTACTTTATGCACTGCGAA 58.306 42.857 0.00 0.00 33.94 4.70
94 95 3.070748 TGCTACTTTATGCACTGCGAAA 58.929 40.909 0.00 0.00 33.94 3.46
95 96 3.125146 TGCTACTTTATGCACTGCGAAAG 59.875 43.478 19.47 19.47 38.88 2.62
96 97 3.370978 GCTACTTTATGCACTGCGAAAGA 59.629 43.478 24.56 13.21 37.46 2.52
97 98 4.142902 GCTACTTTATGCACTGCGAAAGAA 60.143 41.667 24.56 0.30 37.46 2.52
98 99 4.829064 ACTTTATGCACTGCGAAAGAAA 57.171 36.364 24.56 7.15 37.46 2.52
99 100 5.181690 ACTTTATGCACTGCGAAAGAAAA 57.818 34.783 24.56 7.99 37.46 2.29
100 101 5.772521 ACTTTATGCACTGCGAAAGAAAAT 58.227 33.333 24.56 8.37 37.46 1.82
101 102 6.215845 ACTTTATGCACTGCGAAAGAAAATT 58.784 32.000 24.56 8.11 37.46 1.82
102 103 6.701400 ACTTTATGCACTGCGAAAGAAAATTT 59.299 30.769 24.56 7.60 37.46 1.82
103 104 4.977741 ATGCACTGCGAAAGAAAATTTG 57.022 36.364 0.00 0.00 0.00 2.32
104 105 3.122297 TGCACTGCGAAAGAAAATTTGG 58.878 40.909 0.00 0.00 0.00 3.28
105 106 3.181482 TGCACTGCGAAAGAAAATTTGGA 60.181 39.130 0.00 0.00 0.00 3.53
106 107 3.989817 GCACTGCGAAAGAAAATTTGGAT 59.010 39.130 0.00 0.00 0.00 3.41
107 108 4.143263 GCACTGCGAAAGAAAATTTGGATG 60.143 41.667 0.00 0.00 0.00 3.51
108 109 5.221880 CACTGCGAAAGAAAATTTGGATGA 58.778 37.500 0.00 0.00 0.00 2.92
109 110 5.691305 CACTGCGAAAGAAAATTTGGATGAA 59.309 36.000 0.00 0.00 0.00 2.57
110 111 6.200665 CACTGCGAAAGAAAATTTGGATGAAA 59.799 34.615 0.00 0.00 0.00 2.69
111 112 6.930722 ACTGCGAAAGAAAATTTGGATGAAAT 59.069 30.769 0.00 0.00 35.65 2.17
112 113 8.087750 ACTGCGAAAGAAAATTTGGATGAAATA 58.912 29.630 0.00 0.00 32.76 1.40
113 114 8.824159 TGCGAAAGAAAATTTGGATGAAATAA 57.176 26.923 0.00 0.00 32.76 1.40
114 115 9.265901 TGCGAAAGAAAATTTGGATGAAATAAA 57.734 25.926 0.00 0.00 32.76 1.40
126 127 8.821686 TTGGATGAAATAAATACTGATGTGGT 57.178 30.769 0.00 0.00 0.00 4.16
127 128 8.821686 TGGATGAAATAAATACTGATGTGGTT 57.178 30.769 0.00 0.00 0.00 3.67
128 129 8.685427 TGGATGAAATAAATACTGATGTGGTTG 58.315 33.333 0.00 0.00 0.00 3.77
129 130 8.686334 GGATGAAATAAATACTGATGTGGTTGT 58.314 33.333 0.00 0.00 0.00 3.32
131 132 9.859427 ATGAAATAAATACTGATGTGGTTGTTG 57.141 29.630 0.00 0.00 0.00 3.33
132 133 9.072375 TGAAATAAATACTGATGTGGTTGTTGA 57.928 29.630 0.00 0.00 0.00 3.18
133 134 9.341899 GAAATAAATACTGATGTGGTTGTTGAC 57.658 33.333 0.00 0.00 0.00 3.18
134 135 5.356882 AAATACTGATGTGGTTGTTGACG 57.643 39.130 0.00 0.00 0.00 4.35
135 136 2.613026 ACTGATGTGGTTGTTGACGA 57.387 45.000 0.00 0.00 0.00 4.20
136 137 2.210116 ACTGATGTGGTTGTTGACGAC 58.790 47.619 0.00 0.00 37.48 4.34
137 138 2.158957 ACTGATGTGGTTGTTGACGACT 60.159 45.455 0.00 0.00 37.79 4.18
138 139 2.872245 CTGATGTGGTTGTTGACGACTT 59.128 45.455 0.00 0.00 37.79 3.01
139 140 3.275143 TGATGTGGTTGTTGACGACTTT 58.725 40.909 0.00 0.00 37.79 2.66
140 141 3.692101 TGATGTGGTTGTTGACGACTTTT 59.308 39.130 0.00 0.00 37.79 2.27
141 142 3.750639 TGTGGTTGTTGACGACTTTTC 57.249 42.857 0.00 0.00 37.79 2.29
142 143 3.340034 TGTGGTTGTTGACGACTTTTCT 58.660 40.909 0.00 0.00 37.79 2.52
143 144 3.754323 TGTGGTTGTTGACGACTTTTCTT 59.246 39.130 0.00 0.00 37.79 2.52
144 145 4.142773 TGTGGTTGTTGACGACTTTTCTTC 60.143 41.667 0.00 0.00 37.79 2.87
145 146 3.375922 TGGTTGTTGACGACTTTTCTTCC 59.624 43.478 0.00 0.00 0.00 3.46
146 147 3.375922 GGTTGTTGACGACTTTTCTTCCA 59.624 43.478 0.00 0.00 0.00 3.53
147 148 4.495844 GGTTGTTGACGACTTTTCTTCCAG 60.496 45.833 0.00 0.00 0.00 3.86
148 149 4.131649 TGTTGACGACTTTTCTTCCAGA 57.868 40.909 0.00 0.00 0.00 3.86
149 150 4.509616 TGTTGACGACTTTTCTTCCAGAA 58.490 39.130 0.00 0.00 31.28 3.02
150 151 4.938832 TGTTGACGACTTTTCTTCCAGAAA 59.061 37.500 0.00 0.00 42.00 2.52
151 152 5.588648 TGTTGACGACTTTTCTTCCAGAAAT 59.411 36.000 0.00 0.00 43.06 2.17
152 153 5.673337 TGACGACTTTTCTTCCAGAAATG 57.327 39.130 9.46 9.46 43.06 2.32
153 154 4.024048 TGACGACTTTTCTTCCAGAAATGC 60.024 41.667 10.51 5.07 43.06 3.56
154 155 4.137543 ACGACTTTTCTTCCAGAAATGCT 58.862 39.130 10.51 1.69 43.06 3.79
155 156 5.305585 ACGACTTTTCTTCCAGAAATGCTA 58.694 37.500 10.51 0.00 43.06 3.49
156 157 5.409826 ACGACTTTTCTTCCAGAAATGCTAG 59.590 40.000 10.51 4.00 43.06 3.42
157 158 5.163814 CGACTTTTCTTCCAGAAATGCTAGG 60.164 44.000 10.51 0.00 43.06 3.02
158 159 5.880901 ACTTTTCTTCCAGAAATGCTAGGA 58.119 37.500 10.51 0.00 43.06 2.94
159 160 5.942826 ACTTTTCTTCCAGAAATGCTAGGAG 59.057 40.000 10.51 2.62 43.06 3.69
160 161 5.762179 TTTCTTCCAGAAATGCTAGGAGA 57.238 39.130 0.00 0.00 39.13 3.71
161 162 5.762179 TTCTTCCAGAAATGCTAGGAGAA 57.238 39.130 0.00 0.00 29.99 2.87
162 163 5.762179 TCTTCCAGAAATGCTAGGAGAAA 57.238 39.130 0.00 0.00 0.00 2.52
163 164 6.319048 TCTTCCAGAAATGCTAGGAGAAAT 57.681 37.500 0.00 0.00 0.00 2.17
164 165 7.437713 TCTTCCAGAAATGCTAGGAGAAATA 57.562 36.000 0.00 0.00 0.00 1.40
165 166 7.861629 TCTTCCAGAAATGCTAGGAGAAATAA 58.138 34.615 0.00 0.00 0.00 1.40
166 167 7.770897 TCTTCCAGAAATGCTAGGAGAAATAAC 59.229 37.037 0.00 0.00 0.00 1.89
167 168 6.957631 TCCAGAAATGCTAGGAGAAATAACA 58.042 36.000 0.00 0.00 0.00 2.41
168 169 7.402054 TCCAGAAATGCTAGGAGAAATAACAA 58.598 34.615 0.00 0.00 0.00 2.83
169 170 7.554118 TCCAGAAATGCTAGGAGAAATAACAAG 59.446 37.037 0.00 0.00 0.00 3.16
170 171 7.554118 CCAGAAATGCTAGGAGAAATAACAAGA 59.446 37.037 0.00 0.00 0.00 3.02
171 172 9.118300 CAGAAATGCTAGGAGAAATAACAAGAT 57.882 33.333 0.00 0.00 0.00 2.40
172 173 9.336171 AGAAATGCTAGGAGAAATAACAAGATC 57.664 33.333 0.00 0.00 0.00 2.75
173 174 9.336171 GAAATGCTAGGAGAAATAACAAGATCT 57.664 33.333 0.00 0.00 0.00 2.75
174 175 8.674263 AATGCTAGGAGAAATAACAAGATCTG 57.326 34.615 0.00 0.00 0.00 2.90
175 176 6.051717 TGCTAGGAGAAATAACAAGATCTGC 58.948 40.000 0.00 0.00 0.00 4.26
176 177 6.051717 GCTAGGAGAAATAACAAGATCTGCA 58.948 40.000 0.00 0.00 33.26 4.41
177 178 6.709846 GCTAGGAGAAATAACAAGATCTGCAT 59.290 38.462 0.00 0.00 33.26 3.96
178 179 6.939132 AGGAGAAATAACAAGATCTGCATG 57.061 37.500 0.00 0.00 33.26 4.06
179 180 6.421485 AGGAGAAATAACAAGATCTGCATGT 58.579 36.000 0.00 0.00 33.26 3.21
180 181 6.318144 AGGAGAAATAACAAGATCTGCATGTG 59.682 38.462 0.00 0.00 33.26 3.21
181 182 6.094603 GGAGAAATAACAAGATCTGCATGTGT 59.905 38.462 0.00 0.00 31.43 3.72
182 183 7.362401 GGAGAAATAACAAGATCTGCATGTGTT 60.362 37.037 12.93 12.93 36.45 3.32
183 184 7.889469 AGAAATAACAAGATCTGCATGTGTTT 58.111 30.769 13.45 10.58 34.43 2.83
184 185 8.362639 AGAAATAACAAGATCTGCATGTGTTTT 58.637 29.630 13.45 9.47 34.43 2.43
185 186 8.891671 AAATAACAAGATCTGCATGTGTTTTT 57.108 26.923 13.45 9.93 34.43 1.94
201 202 2.727103 TTTTTCACCTCCCTTGCGG 58.273 52.632 0.00 0.00 0.00 5.69
202 203 0.106419 TTTTTCACCTCCCTTGCGGT 60.106 50.000 0.00 0.00 0.00 5.68
203 204 0.106419 TTTTCACCTCCCTTGCGGTT 60.106 50.000 0.00 0.00 0.00 4.44
204 205 0.106419 TTTCACCTCCCTTGCGGTTT 60.106 50.000 0.00 0.00 0.00 3.27
205 206 0.106419 TTCACCTCCCTTGCGGTTTT 60.106 50.000 0.00 0.00 0.00 2.43
206 207 0.766131 TCACCTCCCTTGCGGTTTTA 59.234 50.000 0.00 0.00 0.00 1.52
207 208 1.165270 CACCTCCCTTGCGGTTTTAG 58.835 55.000 0.00 0.00 0.00 1.85
208 209 0.769247 ACCTCCCTTGCGGTTTTAGT 59.231 50.000 0.00 0.00 0.00 2.24
209 210 1.144298 ACCTCCCTTGCGGTTTTAGTT 59.856 47.619 0.00 0.00 0.00 2.24
210 211 1.810755 CCTCCCTTGCGGTTTTAGTTC 59.189 52.381 0.00 0.00 0.00 3.01
211 212 2.500229 CTCCCTTGCGGTTTTAGTTCA 58.500 47.619 0.00 0.00 0.00 3.18
212 213 2.882137 CTCCCTTGCGGTTTTAGTTCAA 59.118 45.455 0.00 0.00 0.00 2.69
213 214 3.288964 TCCCTTGCGGTTTTAGTTCAAA 58.711 40.909 0.00 0.00 0.00 2.69
214 215 3.316868 TCCCTTGCGGTTTTAGTTCAAAG 59.683 43.478 0.00 0.00 0.00 2.77
215 216 3.067601 CCCTTGCGGTTTTAGTTCAAAGT 59.932 43.478 0.00 0.00 0.00 2.66
216 217 4.287720 CCTTGCGGTTTTAGTTCAAAGTC 58.712 43.478 0.00 0.00 0.00 3.01
217 218 3.974871 TGCGGTTTTAGTTCAAAGTCC 57.025 42.857 0.00 0.00 0.00 3.85
218 219 3.280295 TGCGGTTTTAGTTCAAAGTCCA 58.720 40.909 0.00 0.00 0.00 4.02
219 220 3.314080 TGCGGTTTTAGTTCAAAGTCCAG 59.686 43.478 0.00 0.00 0.00 3.86
220 221 3.852205 GCGGTTTTAGTTCAAAGTCCAGC 60.852 47.826 0.00 0.00 0.00 4.85
221 222 3.314080 CGGTTTTAGTTCAAAGTCCAGCA 59.686 43.478 0.00 0.00 0.00 4.41
222 223 4.554723 CGGTTTTAGTTCAAAGTCCAGCAG 60.555 45.833 0.00 0.00 0.00 4.24
223 224 4.338400 GGTTTTAGTTCAAAGTCCAGCAGT 59.662 41.667 0.00 0.00 0.00 4.40
224 225 5.505819 GGTTTTAGTTCAAAGTCCAGCAGTC 60.506 44.000 0.00 0.00 0.00 3.51
225 226 4.689612 TTAGTTCAAAGTCCAGCAGTCT 57.310 40.909 0.00 0.00 0.00 3.24
226 227 5.801531 TTAGTTCAAAGTCCAGCAGTCTA 57.198 39.130 0.00 0.00 0.00 2.59
227 228 4.899352 AGTTCAAAGTCCAGCAGTCTAT 57.101 40.909 0.00 0.00 0.00 1.98
228 229 4.573900 AGTTCAAAGTCCAGCAGTCTATG 58.426 43.478 0.00 0.00 0.00 2.23
252 253 8.755696 TGCTTGTATTTACTAAATTGCTTTGG 57.244 30.769 0.00 0.00 32.38 3.28
253 254 8.580720 TGCTTGTATTTACTAAATTGCTTTGGA 58.419 29.630 0.00 0.00 32.38 3.53
254 255 8.860128 GCTTGTATTTACTAAATTGCTTTGGAC 58.140 33.333 0.00 0.00 32.38 4.02
255 256 9.906660 CTTGTATTTACTAAATTGCTTTGGACA 57.093 29.630 0.00 0.00 32.38 4.02
270 271 9.625747 TTGCTTTGGACATACAATATATTCTGA 57.374 29.630 0.00 0.00 0.00 3.27
271 272 9.625747 TGCTTTGGACATACAATATATTCTGAA 57.374 29.630 0.00 0.00 0.00 3.02
291 292 9.703892 TTCTGAATTTTTATTTGTACACATGGG 57.296 29.630 4.73 0.00 0.00 4.00
292 293 8.865090 TCTGAATTTTTATTTGTACACATGGGT 58.135 29.630 5.60 5.60 0.00 4.51
293 294 9.139174 CTGAATTTTTATTTGTACACATGGGTC 57.861 33.333 2.35 0.00 0.00 4.46
294 295 8.091449 TGAATTTTTATTTGTACACATGGGTCC 58.909 33.333 2.35 0.00 0.00 4.46
295 296 5.986501 TTTTATTTGTACACATGGGTCCC 57.013 39.130 2.35 0.00 0.00 4.46
296 297 4.659529 TTATTTGTACACATGGGTCCCA 57.340 40.909 14.64 14.64 38.19 4.37
297 298 3.756082 ATTTGTACACATGGGTCCCAT 57.244 42.857 18.56 18.56 46.37 4.00
298 299 3.534357 TTTGTACACATGGGTCCCATT 57.466 42.857 21.76 9.75 42.23 3.16
299 300 3.534357 TTGTACACATGGGTCCCATTT 57.466 42.857 21.76 12.67 42.23 2.32
300 301 3.534357 TGTACACATGGGTCCCATTTT 57.466 42.857 21.76 8.33 42.23 1.82
301 302 3.161067 TGTACACATGGGTCCCATTTTG 58.839 45.455 21.76 21.43 42.23 2.44
302 303 2.397044 ACACATGGGTCCCATTTTGT 57.603 45.000 21.76 22.06 42.23 2.83
303 304 2.247358 ACACATGGGTCCCATTTTGTC 58.753 47.619 21.76 0.00 42.23 3.18
304 305 1.202114 CACATGGGTCCCATTTTGTCG 59.798 52.381 21.76 11.18 42.23 4.35
305 306 1.203001 ACATGGGTCCCATTTTGTCGT 60.203 47.619 21.76 11.85 42.23 4.34
306 307 1.472480 CATGGGTCCCATTTTGTCGTC 59.528 52.381 21.76 0.00 42.23 4.20
307 308 0.250989 TGGGTCCCATTTTGTCGTCC 60.251 55.000 6.47 0.00 0.00 4.79
308 309 0.963856 GGGTCCCATTTTGTCGTCCC 60.964 60.000 1.78 0.00 0.00 4.46
309 310 0.250989 GGTCCCATTTTGTCGTCCCA 60.251 55.000 0.00 0.00 0.00 4.37
310 311 0.879090 GTCCCATTTTGTCGTCCCAC 59.121 55.000 0.00 0.00 0.00 4.61
311 312 0.250989 TCCCATTTTGTCGTCCCACC 60.251 55.000 0.00 0.00 0.00 4.61
312 313 1.582610 CCCATTTTGTCGTCCCACCG 61.583 60.000 0.00 0.00 0.00 4.94
313 314 1.209127 CATTTTGTCGTCCCACCGC 59.791 57.895 0.00 0.00 0.00 5.68
314 315 1.228003 ATTTTGTCGTCCCACCGCA 60.228 52.632 0.00 0.00 0.00 5.69
315 316 1.234615 ATTTTGTCGTCCCACCGCAG 61.235 55.000 0.00 0.00 0.00 5.18
328 329 2.669569 CGCAGGGCCCCGAATATG 60.670 66.667 21.43 10.58 0.00 1.78
329 330 2.515901 GCAGGGCCCCGAATATGT 59.484 61.111 21.43 0.00 0.00 2.29
330 331 1.758592 GCAGGGCCCCGAATATGTA 59.241 57.895 21.43 0.00 0.00 2.29
331 332 0.328258 GCAGGGCCCCGAATATGTAT 59.672 55.000 21.43 0.00 0.00 2.29
332 333 1.950484 GCAGGGCCCCGAATATGTATG 60.950 57.143 21.43 7.12 0.00 2.39
333 334 0.991920 AGGGCCCCGAATATGTATGG 59.008 55.000 21.43 0.00 0.00 2.74
334 335 0.988832 GGGCCCCGAATATGTATGGA 59.011 55.000 12.23 0.00 0.00 3.41
335 336 1.339727 GGGCCCCGAATATGTATGGAC 60.340 57.143 12.23 0.00 0.00 4.02
336 337 1.339727 GGCCCCGAATATGTATGGACC 60.340 57.143 0.00 0.00 0.00 4.46
337 338 1.674817 GCCCCGAATATGTATGGACCG 60.675 57.143 0.00 0.00 0.00 4.79
338 339 1.066430 CCCCGAATATGTATGGACCGG 60.066 57.143 0.00 0.00 35.68 5.28
339 340 1.674817 CCCGAATATGTATGGACCGGC 60.675 57.143 0.00 0.00 34.69 6.13
340 341 1.674817 CCGAATATGTATGGACCGGCC 60.675 57.143 0.00 4.32 37.10 6.13
341 342 1.674817 CGAATATGTATGGACCGGCCC 60.675 57.143 0.00 0.00 34.97 5.80
342 343 1.628846 GAATATGTATGGACCGGCCCT 59.371 52.381 8.77 3.11 34.97 5.19
343 344 0.984230 ATATGTATGGACCGGCCCTG 59.016 55.000 8.77 0.00 34.97 4.45
344 345 0.105401 TATGTATGGACCGGCCCTGA 60.105 55.000 8.77 0.00 34.97 3.86
345 346 0.986019 ATGTATGGACCGGCCCTGAA 60.986 55.000 8.77 0.00 34.97 3.02
346 347 1.202099 TGTATGGACCGGCCCTGAAA 61.202 55.000 8.77 0.00 34.97 2.69
347 348 0.463833 GTATGGACCGGCCCTGAAAG 60.464 60.000 8.77 0.00 34.97 2.62
367 368 9.219603 CTGAAAGGAGTGAGAAATATTAACACA 57.780 33.333 16.28 5.82 34.47 3.72
368 369 9.567776 TGAAAGGAGTGAGAAATATTAACACAA 57.432 29.630 16.28 0.00 34.47 3.33
369 370 9.827411 GAAAGGAGTGAGAAATATTAACACAAC 57.173 33.333 16.28 10.88 34.47 3.32
370 371 7.923414 AGGAGTGAGAAATATTAACACAACC 57.077 36.000 16.28 16.65 34.47 3.77
371 372 6.594159 AGGAGTGAGAAATATTAACACAACCG 59.406 38.462 16.28 0.00 36.35 4.44
372 373 6.592607 GGAGTGAGAAATATTAACACAACCGA 59.407 38.462 16.28 0.00 34.47 4.69
373 374 7.280205 GGAGTGAGAAATATTAACACAACCGAT 59.720 37.037 16.28 1.86 34.47 4.18
374 375 9.309516 GAGTGAGAAATATTAACACAACCGATA 57.690 33.333 16.28 0.00 34.47 2.92
375 376 9.661563 AGTGAGAAATATTAACACAACCGATAA 57.338 29.630 16.28 0.00 34.47 1.75
385 386 9.751542 ATTAACACAACCGATAAAAACAATTGA 57.248 25.926 13.59 0.00 0.00 2.57
386 387 9.751542 TTAACACAACCGATAAAAACAATTGAT 57.248 25.926 13.59 0.00 0.00 2.57
387 388 8.655651 AACACAACCGATAAAAACAATTGATT 57.344 26.923 13.59 3.30 0.00 2.57
388 389 8.655651 ACACAACCGATAAAAACAATTGATTT 57.344 26.923 13.59 10.35 0.00 2.17
389 390 9.103861 ACACAACCGATAAAAACAATTGATTTT 57.896 25.926 24.19 24.19 34.93 1.82
390 391 9.928236 CACAACCGATAAAAACAATTGATTTTT 57.072 25.926 25.41 23.95 41.11 1.94
407 408 3.974871 TTTTTAACACTCGGCCACTTC 57.025 42.857 2.24 0.00 0.00 3.01
408 409 2.922740 TTTAACACTCGGCCACTTCT 57.077 45.000 2.24 0.00 0.00 2.85
409 410 2.922740 TTAACACTCGGCCACTTCTT 57.077 45.000 2.24 0.00 0.00 2.52
410 411 4.339872 TTTAACACTCGGCCACTTCTTA 57.660 40.909 2.24 0.00 0.00 2.10
411 412 2.457366 AACACTCGGCCACTTCTTAG 57.543 50.000 2.24 0.00 0.00 2.18
412 413 1.339097 ACACTCGGCCACTTCTTAGT 58.661 50.000 2.24 0.00 34.00 2.24
413 414 1.692519 ACACTCGGCCACTTCTTAGTT 59.307 47.619 2.24 0.00 30.26 2.24
414 415 2.895404 ACACTCGGCCACTTCTTAGTTA 59.105 45.455 2.24 0.00 30.26 2.24
415 416 3.514309 ACACTCGGCCACTTCTTAGTTAT 59.486 43.478 2.24 0.00 30.26 1.89
416 417 4.113354 CACTCGGCCACTTCTTAGTTATC 58.887 47.826 2.24 0.00 30.26 1.75
417 418 3.181489 ACTCGGCCACTTCTTAGTTATCG 60.181 47.826 2.24 0.00 30.26 2.92
418 419 3.018856 TCGGCCACTTCTTAGTTATCGA 58.981 45.455 2.24 0.00 30.26 3.59
419 420 3.635373 TCGGCCACTTCTTAGTTATCGAT 59.365 43.478 2.24 2.16 30.26 3.59
420 421 3.736252 CGGCCACTTCTTAGTTATCGATG 59.264 47.826 8.54 0.00 30.26 3.84
421 422 4.499188 CGGCCACTTCTTAGTTATCGATGA 60.499 45.833 8.54 0.00 30.26 2.92
422 423 5.357257 GGCCACTTCTTAGTTATCGATGAA 58.643 41.667 8.54 0.68 30.26 2.57
423 424 5.815740 GGCCACTTCTTAGTTATCGATGAAA 59.184 40.000 8.54 0.00 30.26 2.69
424 425 6.315393 GGCCACTTCTTAGTTATCGATGAAAA 59.685 38.462 8.54 0.00 30.26 2.29
425 426 7.148306 GGCCACTTCTTAGTTATCGATGAAAAA 60.148 37.037 8.54 0.00 30.26 1.94
426 427 7.692705 GCCACTTCTTAGTTATCGATGAAAAAC 59.307 37.037 8.54 4.34 30.26 2.43
427 428 8.717821 CCACTTCTTAGTTATCGATGAAAAACA 58.282 33.333 8.54 0.00 30.26 2.83
428 429 9.530129 CACTTCTTAGTTATCGATGAAAAACAC 57.470 33.333 8.54 0.00 30.26 3.32
429 430 9.268268 ACTTCTTAGTTATCGATGAAAAACACA 57.732 29.630 8.54 0.00 0.00 3.72
435 436 8.547967 AGTTATCGATGAAAAACACATACAGT 57.452 30.769 8.54 0.00 0.00 3.55
436 437 9.647797 AGTTATCGATGAAAAACACATACAGTA 57.352 29.630 8.54 0.00 0.00 2.74
440 441 8.996988 TCGATGAAAAACACATACAGTAAAAC 57.003 30.769 0.00 0.00 0.00 2.43
441 442 8.613482 TCGATGAAAAACACATACAGTAAAACA 58.387 29.630 0.00 0.00 0.00 2.83
442 443 9.227490 CGATGAAAAACACATACAGTAAAACAA 57.773 29.630 0.00 0.00 0.00 2.83
478 479 7.817910 TTTAAGGTAGACTGAATTAAGGGGA 57.182 36.000 0.00 0.00 0.00 4.81
479 480 8.401955 TTTAAGGTAGACTGAATTAAGGGGAT 57.598 34.615 0.00 0.00 0.00 3.85
480 481 6.910259 AAGGTAGACTGAATTAAGGGGATT 57.090 37.500 0.00 0.00 0.00 3.01
481 482 6.253946 AGGTAGACTGAATTAAGGGGATTG 57.746 41.667 0.00 0.00 0.00 2.67
482 483 5.132816 AGGTAGACTGAATTAAGGGGATTGG 59.867 44.000 0.00 0.00 0.00 3.16
483 484 5.104067 GGTAGACTGAATTAAGGGGATTGGT 60.104 44.000 0.00 0.00 0.00 3.67
484 485 6.100714 GGTAGACTGAATTAAGGGGATTGGTA 59.899 42.308 0.00 0.00 0.00 3.25
485 486 6.848562 AGACTGAATTAAGGGGATTGGTAT 57.151 37.500 0.00 0.00 0.00 2.73
486 487 7.226059 AGACTGAATTAAGGGGATTGGTATT 57.774 36.000 0.00 0.00 0.00 1.89
487 488 8.344939 AGACTGAATTAAGGGGATTGGTATTA 57.655 34.615 0.00 0.00 0.00 0.98
488 489 8.787818 AGACTGAATTAAGGGGATTGGTATTAA 58.212 33.333 0.00 0.00 0.00 1.40
489 490 8.762481 ACTGAATTAAGGGGATTGGTATTAAC 57.238 34.615 0.00 0.00 0.00 2.01
490 491 7.783119 ACTGAATTAAGGGGATTGGTATTAACC 59.217 37.037 0.00 0.00 46.98 2.85
491 492 7.889178 TGAATTAAGGGGATTGGTATTAACCT 58.111 34.615 0.00 0.00 46.91 3.50
492 493 9.016243 TGAATTAAGGGGATTGGTATTAACCTA 57.984 33.333 0.00 0.00 46.91 3.08
493 494 9.871175 GAATTAAGGGGATTGGTATTAACCTAA 57.129 33.333 0.00 0.00 46.91 2.69
496 497 7.966339 AAGGGGATTGGTATTAACCTAAAAC 57.034 36.000 0.00 0.00 46.91 2.43
497 498 7.046891 AGGGGATTGGTATTAACCTAAAACA 57.953 36.000 0.00 0.00 46.91 2.83
498 499 7.658260 AGGGGATTGGTATTAACCTAAAACAT 58.342 34.615 0.00 0.00 46.91 2.71
499 500 7.563556 AGGGGATTGGTATTAACCTAAAACATG 59.436 37.037 0.00 0.00 46.91 3.21
500 501 7.562088 GGGGATTGGTATTAACCTAAAACATGA 59.438 37.037 0.00 0.00 46.91 3.07
501 502 8.973182 GGGATTGGTATTAACCTAAAACATGAA 58.027 33.333 0.00 0.00 46.91 2.57
541 542 4.559153 ACTTGCATGTTTTCAAGGTATGC 58.441 39.130 13.27 0.00 42.82 3.14
542 543 7.525194 ATAACTTGCATGTTTTCAAGGTATGCA 60.525 33.333 21.44 6.14 45.95 3.96
545 546 4.808558 GCATGTTTTCAAGGTATGCAAGA 58.191 39.130 0.00 0.00 42.63 3.02
546 547 5.229423 GCATGTTTTCAAGGTATGCAAGAA 58.771 37.500 0.00 0.00 42.63 2.52
547 548 5.695816 GCATGTTTTCAAGGTATGCAAGAAA 59.304 36.000 0.00 0.00 42.63 2.52
548 549 6.202570 GCATGTTTTCAAGGTATGCAAGAAAA 59.797 34.615 0.00 0.00 42.63 2.29
549 550 7.254727 GCATGTTTTCAAGGTATGCAAGAAAAA 60.255 33.333 0.00 0.00 42.63 1.94
550 551 8.776470 CATGTTTTCAAGGTATGCAAGAAAAAT 58.224 29.630 0.00 0.00 39.15 1.82
551 552 8.140677 TGTTTTCAAGGTATGCAAGAAAAATG 57.859 30.769 0.00 0.00 39.15 2.32
552 553 7.226325 TGTTTTCAAGGTATGCAAGAAAAATGG 59.774 33.333 0.00 0.00 39.15 3.16
553 554 4.819769 TCAAGGTATGCAAGAAAAATGGC 58.180 39.130 0.00 0.00 0.00 4.40
554 555 4.282957 TCAAGGTATGCAAGAAAAATGGCA 59.717 37.500 0.00 0.00 41.00 4.92
555 556 4.192429 AGGTATGCAAGAAAAATGGCAC 57.808 40.909 0.00 0.00 39.34 5.01
568 569 2.719376 TGGCACAAGTTCCAAGAGC 58.281 52.632 0.00 0.00 31.92 4.09
569 570 0.106769 TGGCACAAGTTCCAAGAGCA 60.107 50.000 0.00 0.00 31.92 4.26
570 571 1.032014 GGCACAAGTTCCAAGAGCAA 58.968 50.000 0.00 0.00 0.00 3.91
571 572 1.408702 GGCACAAGTTCCAAGAGCAAA 59.591 47.619 0.00 0.00 0.00 3.68
572 573 2.159114 GGCACAAGTTCCAAGAGCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
573 574 3.118542 GCACAAGTTCCAAGAGCAAAAG 58.881 45.455 0.00 0.00 0.00 2.27
574 575 3.118542 CACAAGTTCCAAGAGCAAAAGC 58.881 45.455 0.00 0.00 0.00 3.51
575 576 3.026694 ACAAGTTCCAAGAGCAAAAGCT 58.973 40.909 0.00 0.00 0.00 3.74
576 577 3.181483 ACAAGTTCCAAGAGCAAAAGCTG 60.181 43.478 0.00 0.00 0.00 4.24
577 578 2.936202 AGTTCCAAGAGCAAAAGCTGA 58.064 42.857 0.00 0.00 0.00 4.26
578 579 3.290710 AGTTCCAAGAGCAAAAGCTGAA 58.709 40.909 0.00 0.00 0.00 3.02
579 580 3.893813 AGTTCCAAGAGCAAAAGCTGAAT 59.106 39.130 0.00 0.00 0.00 2.57
580 581 3.928727 TCCAAGAGCAAAAGCTGAATG 57.071 42.857 0.00 0.00 0.00 2.67
581 582 2.029649 TCCAAGAGCAAAAGCTGAATGC 60.030 45.455 9.87 9.87 43.29 3.56
582 583 2.288579 CCAAGAGCAAAAGCTGAATGCA 60.289 45.455 17.65 0.00 45.94 3.96
583 584 2.719426 AGAGCAAAAGCTGAATGCAC 57.281 45.000 17.65 12.67 45.94 4.57
584 585 1.958579 AGAGCAAAAGCTGAATGCACA 59.041 42.857 17.65 0.00 45.94 4.57
585 586 2.056577 GAGCAAAAGCTGAATGCACAC 58.943 47.619 17.65 7.64 45.94 3.82
586 587 1.409790 AGCAAAAGCTGAATGCACACA 59.590 42.857 17.65 0.00 45.94 3.72
587 588 2.036733 AGCAAAAGCTGAATGCACACAT 59.963 40.909 17.65 0.00 45.94 3.21
589 590 3.989167 GCAAAAGCTGAATGCACACATTA 59.011 39.130 12.31 0.00 46.59 1.90
590 591 4.448395 GCAAAAGCTGAATGCACACATTAA 59.552 37.500 12.31 0.00 46.59 1.40
591 592 5.389098 GCAAAAGCTGAATGCACACATTAAG 60.389 40.000 12.31 0.00 46.59 1.85
592 593 5.458041 AAAGCTGAATGCACACATTAAGT 57.542 34.783 5.30 0.00 46.59 2.24
593 594 5.458041 AAGCTGAATGCACACATTAAGTT 57.542 34.783 5.30 0.00 46.59 2.66
594 595 5.458041 AGCTGAATGCACACATTAAGTTT 57.542 34.783 5.30 0.00 46.59 2.66
595 596 5.464168 AGCTGAATGCACACATTAAGTTTC 58.536 37.500 5.30 0.00 46.59 2.78
596 597 4.321745 GCTGAATGCACACATTAAGTTTCG 59.678 41.667 5.30 0.00 46.59 3.46
597 598 5.431420 TGAATGCACACATTAAGTTTCGT 57.569 34.783 0.00 0.00 46.59 3.85
598 599 5.211454 TGAATGCACACATTAAGTTTCGTG 58.789 37.500 0.00 0.00 46.59 4.35
599 600 5.008118 TGAATGCACACATTAAGTTTCGTGA 59.992 36.000 0.00 0.00 46.59 4.35
600 601 4.203950 TGCACACATTAAGTTTCGTGAC 57.796 40.909 0.00 0.00 33.56 3.67
601 602 3.874543 TGCACACATTAAGTTTCGTGACT 59.125 39.130 0.00 0.00 33.56 3.41
602 603 5.051153 TGCACACATTAAGTTTCGTGACTA 58.949 37.500 0.00 0.00 33.56 2.59
603 604 5.524281 TGCACACATTAAGTTTCGTGACTAA 59.476 36.000 0.00 0.00 33.56 2.24
604 605 6.037281 TGCACACATTAAGTTTCGTGACTAAA 59.963 34.615 0.00 0.00 33.56 1.85
605 606 6.573725 GCACACATTAAGTTTCGTGACTAAAG 59.426 38.462 0.00 0.00 33.56 1.85
606 607 7.517734 GCACACATTAAGTTTCGTGACTAAAGA 60.518 37.037 0.00 0.00 33.56 2.52
607 608 8.495949 CACACATTAAGTTTCGTGACTAAAGAT 58.504 33.333 0.00 0.00 33.56 2.40
608 609 9.701098 ACACATTAAGTTTCGTGACTAAAGATA 57.299 29.630 0.00 0.00 33.56 1.98
612 613 8.937634 TTAAGTTTCGTGACTAAAGATATCCC 57.062 34.615 0.00 0.00 0.00 3.85
613 614 5.915175 AGTTTCGTGACTAAAGATATCCCC 58.085 41.667 0.00 0.00 0.00 4.81
614 615 5.424252 AGTTTCGTGACTAAAGATATCCCCA 59.576 40.000 0.00 0.00 0.00 4.96
615 616 6.099845 AGTTTCGTGACTAAAGATATCCCCAT 59.900 38.462 0.00 0.00 0.00 4.00
616 617 5.723672 TCGTGACTAAAGATATCCCCATC 57.276 43.478 0.00 0.00 0.00 3.51
617 618 4.217767 TCGTGACTAAAGATATCCCCATCG 59.782 45.833 0.00 0.00 0.00 3.84
618 619 4.022242 CGTGACTAAAGATATCCCCATCGT 60.022 45.833 0.00 0.00 0.00 3.73
619 620 5.182570 CGTGACTAAAGATATCCCCATCGTA 59.817 44.000 0.00 0.00 0.00 3.43
620 621 6.388278 GTGACTAAAGATATCCCCATCGTAC 58.612 44.000 0.00 0.00 0.00 3.67
621 622 6.015688 GTGACTAAAGATATCCCCATCGTACA 60.016 42.308 0.00 0.00 0.00 2.90
622 623 6.551975 TGACTAAAGATATCCCCATCGTACAA 59.448 38.462 0.00 0.00 0.00 2.41
623 624 6.994221 ACTAAAGATATCCCCATCGTACAAG 58.006 40.000 0.00 0.00 0.00 3.16
624 625 6.781014 ACTAAAGATATCCCCATCGTACAAGA 59.219 38.462 0.00 0.00 0.00 3.02
625 626 5.730296 AAGATATCCCCATCGTACAAGAG 57.270 43.478 0.00 0.00 0.00 2.85
626 627 4.999310 AGATATCCCCATCGTACAAGAGA 58.001 43.478 0.00 0.00 0.00 3.10
627 628 5.394738 AGATATCCCCATCGTACAAGAGAA 58.605 41.667 0.00 0.00 0.00 2.87
628 629 5.839063 AGATATCCCCATCGTACAAGAGAAA 59.161 40.000 0.00 0.00 0.00 2.52
629 630 4.837093 ATCCCCATCGTACAAGAGAAAA 57.163 40.909 0.00 0.00 0.00 2.29
630 631 4.627284 TCCCCATCGTACAAGAGAAAAA 57.373 40.909 0.00 0.00 0.00 1.94
677 678 9.927668 ATTAAATAATACAAAAAGCAGTGCACT 57.072 25.926 15.25 15.25 0.00 4.40
678 679 9.757227 TTAAATAATACAAAAAGCAGTGCACTT 57.243 25.926 18.94 7.29 0.00 3.16
679 680 7.873739 AATAATACAAAAAGCAGTGCACTTC 57.126 32.000 18.94 13.50 0.00 3.01
680 681 2.193306 ACAAAAAGCAGTGCACTTCG 57.807 45.000 18.94 8.39 0.00 3.79
681 682 1.742831 ACAAAAAGCAGTGCACTTCGA 59.257 42.857 18.94 0.00 0.00 3.71
682 683 2.163412 ACAAAAAGCAGTGCACTTCGAA 59.837 40.909 18.94 0.00 0.00 3.71
683 684 2.763249 AAAAGCAGTGCACTTCGAAG 57.237 45.000 23.43 23.43 0.00 3.79
684 685 1.953559 AAAGCAGTGCACTTCGAAGA 58.046 45.000 31.08 6.55 0.00 2.87
685 686 1.953559 AAGCAGTGCACTTCGAAGAA 58.046 45.000 31.08 13.31 45.90 2.52
686 687 1.221414 AGCAGTGCACTTCGAAGAAC 58.779 50.000 31.08 22.78 45.90 3.01
687 688 0.937304 GCAGTGCACTTCGAAGAACA 59.063 50.000 31.08 23.13 45.90 3.18
688 689 1.532868 GCAGTGCACTTCGAAGAACAT 59.467 47.619 31.08 14.13 45.90 2.71
689 690 2.736721 GCAGTGCACTTCGAAGAACATA 59.263 45.455 31.08 9.77 45.90 2.29
690 691 3.186409 GCAGTGCACTTCGAAGAACATAA 59.814 43.478 31.08 7.76 45.90 1.90
691 692 4.667668 GCAGTGCACTTCGAAGAACATAAG 60.668 45.833 31.08 19.15 45.90 1.73
692 693 4.449068 CAGTGCACTTCGAAGAACATAAGT 59.551 41.667 31.08 4.05 45.90 2.24
712 713 9.606631 CATAAGTGAAATTATATCTCCTAGGGC 57.393 37.037 9.46 0.00 0.00 5.19
713 714 7.633018 AAGTGAAATTATATCTCCTAGGGCA 57.367 36.000 9.46 0.00 0.00 5.36
714 715 7.633018 AGTGAAATTATATCTCCTAGGGCAA 57.367 36.000 9.46 0.00 0.00 4.52
715 716 8.045720 AGTGAAATTATATCTCCTAGGGCAAA 57.954 34.615 9.46 0.00 0.00 3.68
716 717 8.502738 AGTGAAATTATATCTCCTAGGGCAAAA 58.497 33.333 9.46 0.00 0.00 2.44
717 718 9.131791 GTGAAATTATATCTCCTAGGGCAAAAA 57.868 33.333 9.46 0.00 0.00 1.94
718 719 9.881773 TGAAATTATATCTCCTAGGGCAAAAAT 57.118 29.630 9.46 0.00 0.00 1.82
720 721 9.881773 AAATTATATCTCCTAGGGCAAAAATCA 57.118 29.630 9.46 0.00 0.00 2.57
724 725 8.870075 ATATCTCCTAGGGCAAAAATCATAAC 57.130 34.615 9.46 0.00 0.00 1.89
725 726 6.327386 TCTCCTAGGGCAAAAATCATAACT 57.673 37.500 9.46 0.00 0.00 2.24
726 727 7.446106 TCTCCTAGGGCAAAAATCATAACTA 57.554 36.000 9.46 0.00 0.00 2.24
727 728 8.045720 TCTCCTAGGGCAAAAATCATAACTAT 57.954 34.615 9.46 0.00 0.00 2.12
728 729 8.502738 TCTCCTAGGGCAAAAATCATAACTATT 58.497 33.333 9.46 0.00 0.00 1.73
729 730 8.463930 TCCTAGGGCAAAAATCATAACTATTG 57.536 34.615 9.46 0.00 0.00 1.90
730 731 8.058847 TCCTAGGGCAAAAATCATAACTATTGT 58.941 33.333 9.46 0.00 0.00 2.71
731 732 9.349713 CCTAGGGCAAAAATCATAACTATTGTA 57.650 33.333 0.00 0.00 0.00 2.41
734 735 8.567948 AGGGCAAAAATCATAACTATTGTATCG 58.432 33.333 0.00 0.00 0.00 2.92
735 736 8.564574 GGGCAAAAATCATAACTATTGTATCGA 58.435 33.333 0.00 0.00 0.00 3.59
736 737 9.944663 GGCAAAAATCATAACTATTGTATCGAA 57.055 29.630 0.00 0.00 0.00 3.71
763 764 8.870160 TGTTTTCACAAATCAATACTCCAAAG 57.130 30.769 0.00 0.00 0.00 2.77
764 765 7.437862 TGTTTTCACAAATCAATACTCCAAAGC 59.562 33.333 0.00 0.00 0.00 3.51
765 766 6.647334 TTCACAAATCAATACTCCAAAGCA 57.353 33.333 0.00 0.00 0.00 3.91
766 767 6.012658 TCACAAATCAATACTCCAAAGCAC 57.987 37.500 0.00 0.00 0.00 4.40
767 768 5.534278 TCACAAATCAATACTCCAAAGCACA 59.466 36.000 0.00 0.00 0.00 4.57
768 769 6.040278 TCACAAATCAATACTCCAAAGCACAA 59.960 34.615 0.00 0.00 0.00 3.33
769 770 6.144402 CACAAATCAATACTCCAAAGCACAAC 59.856 38.462 0.00 0.00 0.00 3.32
770 771 6.040842 ACAAATCAATACTCCAAAGCACAACT 59.959 34.615 0.00 0.00 0.00 3.16
771 772 7.230510 ACAAATCAATACTCCAAAGCACAACTA 59.769 33.333 0.00 0.00 0.00 2.24
772 773 6.743575 ATCAATACTCCAAAGCACAACTAC 57.256 37.500 0.00 0.00 0.00 2.73
773 774 5.865085 TCAATACTCCAAAGCACAACTACT 58.135 37.500 0.00 0.00 0.00 2.57
774 775 5.932303 TCAATACTCCAAAGCACAACTACTC 59.068 40.000 0.00 0.00 0.00 2.59
775 776 3.127425 ACTCCAAAGCACAACTACTCC 57.873 47.619 0.00 0.00 0.00 3.85
776 777 2.438021 ACTCCAAAGCACAACTACTCCA 59.562 45.455 0.00 0.00 0.00 3.86
777 778 3.070018 CTCCAAAGCACAACTACTCCAG 58.930 50.000 0.00 0.00 0.00 3.86
778 779 1.537202 CCAAAGCACAACTACTCCAGC 59.463 52.381 0.00 0.00 0.00 4.85
779 780 2.498167 CAAAGCACAACTACTCCAGCT 58.502 47.619 0.00 0.00 0.00 4.24
780 781 3.557054 CCAAAGCACAACTACTCCAGCTA 60.557 47.826 0.00 0.00 0.00 3.32
781 782 4.256920 CAAAGCACAACTACTCCAGCTAT 58.743 43.478 0.00 0.00 0.00 2.97
782 783 5.419542 CAAAGCACAACTACTCCAGCTATA 58.580 41.667 0.00 0.00 0.00 1.31
783 784 5.878406 AAGCACAACTACTCCAGCTATAT 57.122 39.130 0.00 0.00 0.00 0.86
784 785 6.978674 AAGCACAACTACTCCAGCTATATA 57.021 37.500 0.00 0.00 0.00 0.86
785 786 6.582677 AGCACAACTACTCCAGCTATATAG 57.417 41.667 5.30 5.30 0.00 1.31
786 787 6.307776 AGCACAACTACTCCAGCTATATAGA 58.692 40.000 14.16 0.00 0.00 1.98
787 788 6.432783 AGCACAACTACTCCAGCTATATAGAG 59.567 42.308 14.16 4.71 0.00 2.43
788 789 6.431543 GCACAACTACTCCAGCTATATAGAGA 59.568 42.308 14.16 5.79 0.00 3.10
789 790 7.574217 GCACAACTACTCCAGCTATATAGAGAC 60.574 44.444 14.16 0.00 0.00 3.36
790 791 7.445707 CACAACTACTCCAGCTATATAGAGACA 59.554 40.741 14.16 0.00 0.00 3.41
791 792 8.167392 ACAACTACTCCAGCTATATAGAGACAT 58.833 37.037 14.16 0.00 0.00 3.06
833 835 3.917300 AGACAAGATACCGATTCCTCCT 58.083 45.455 0.00 0.00 0.00 3.69
840 842 4.830600 AGATACCGATTCCTCCTCTTCTTC 59.169 45.833 0.00 0.00 0.00 2.87
848 850 2.096248 CCTCCTCTTCTTCGCTACACT 58.904 52.381 0.00 0.00 0.00 3.55
850 852 3.428316 CCTCCTCTTCTTCGCTACACTTC 60.428 52.174 0.00 0.00 0.00 3.01
851 853 3.154710 TCCTCTTCTTCGCTACACTTCA 58.845 45.455 0.00 0.00 0.00 3.02
852 854 3.764434 TCCTCTTCTTCGCTACACTTCAT 59.236 43.478 0.00 0.00 0.00 2.57
858 874 2.230940 CGCTACACTTCATCCGCCG 61.231 63.158 0.00 0.00 0.00 6.46
863 879 0.319083 ACACTTCATCCGCCGTTACA 59.681 50.000 0.00 0.00 0.00 2.41
864 880 1.066430 ACACTTCATCCGCCGTTACAT 60.066 47.619 0.00 0.00 0.00 2.29
869 885 3.462483 TCATCCGCCGTTACATACAAT 57.538 42.857 0.00 0.00 0.00 2.71
879 895 5.336134 GCCGTTACATACAATCAAAACCCTT 60.336 40.000 0.00 0.00 0.00 3.95
881 897 7.575343 GCCGTTACATACAATCAAAACCCTTAA 60.575 37.037 0.00 0.00 0.00 1.85
882 898 7.751793 CCGTTACATACAATCAAAACCCTTAAC 59.248 37.037 0.00 0.00 0.00 2.01
883 899 8.508875 CGTTACATACAATCAAAACCCTTAACT 58.491 33.333 0.00 0.00 0.00 2.24
888 904 8.893727 CATACAATCAAAACCCTTAACTAGAGG 58.106 37.037 0.00 0.00 0.00 3.69
899 915 0.322277 AACTAGAGGACTCGTGCCGA 60.322 55.000 0.00 0.00 34.09 5.54
915 931 0.534427 CCGAGCTGTCCATGCATCAT 60.534 55.000 0.00 0.00 0.00 2.45
933 949 1.408702 CATTCCCCGGCCTTGTATTTG 59.591 52.381 0.00 0.00 0.00 2.32
941 957 2.298610 GGCCTTGTATTTGTAGGGAGC 58.701 52.381 0.00 0.00 0.00 4.70
975 991 2.542907 GGGAACACACACACCGCAG 61.543 63.158 0.00 0.00 0.00 5.18
999 1018 8.313931 CAGCAAAGAAACTAAGAAAGAAAAACG 58.686 33.333 0.00 0.00 0.00 3.60
1103 1122 1.302271 GTCCACCGGTTTCCACTCC 60.302 63.158 2.97 0.00 0.00 3.85
1111 1130 3.936203 TTTCCACTCCGCCGCACT 61.936 61.111 0.00 0.00 0.00 4.40
1112 1131 4.680237 TTCCACTCCGCCGCACTG 62.680 66.667 0.00 0.00 0.00 3.66
1538 1596 1.001860 AGACTCAGACAAGCCAGCTTC 59.998 52.381 0.90 0.00 33.42 3.86
1548 1606 1.008538 GCCAGCTTCCACACAAACG 60.009 57.895 0.00 0.00 0.00 3.60
1549 1607 1.444119 GCCAGCTTCCACACAAACGA 61.444 55.000 0.00 0.00 0.00 3.85
1550 1608 1.021202 CCAGCTTCCACACAAACGAA 58.979 50.000 0.00 0.00 0.00 3.85
1650 1709 5.119931 TGGGATCAATTAATAATGCGCAC 57.880 39.130 14.90 0.00 0.00 5.34
1753 1817 3.687321 ATACAGTGCTGCCGCCAGG 62.687 63.158 0.00 0.00 39.54 4.45
1939 2013 3.380393 TGTCAATTTATCTCGGAGGGGA 58.620 45.455 4.96 0.00 0.00 4.81
2085 2160 4.445452 AACGGCTTCGACTTACTAATCA 57.555 40.909 0.00 0.00 37.63 2.57
2095 2170 7.165460 TCGACTTACTAATCATCCAGTTTCA 57.835 36.000 0.00 0.00 0.00 2.69
2115 2241 0.387112 TGCGCTGCGAATTGGAAAAG 60.387 50.000 28.07 0.00 0.00 2.27
2116 2242 0.109781 GCGCTGCGAATTGGAAAAGA 60.110 50.000 28.07 0.00 0.00 2.52
2118 2244 1.978782 CGCTGCGAATTGGAAAAGAAC 59.021 47.619 18.66 0.00 0.00 3.01
2120 2246 3.120338 CGCTGCGAATTGGAAAAGAACTA 60.120 43.478 18.66 0.00 0.00 2.24
2121 2247 4.159120 GCTGCGAATTGGAAAAGAACTAC 58.841 43.478 0.00 0.00 0.00 2.73
2125 2251 6.228258 TGCGAATTGGAAAAGAACTACTAGT 58.772 36.000 0.00 0.00 0.00 2.57
2148 2274 3.446873 TGCACTCATCTTGTTTGTTTGGT 59.553 39.130 0.00 0.00 0.00 3.67
2154 2280 8.729756 CACTCATCTTGTTTGTTTGGTATGATA 58.270 33.333 0.00 0.00 0.00 2.15
2155 2281 9.466497 ACTCATCTTGTTTGTTTGGTATGATAT 57.534 29.630 0.00 0.00 0.00 1.63
2254 2387 1.133792 CCGCCCAAATCCACCTAATCT 60.134 52.381 0.00 0.00 0.00 2.40
2260 2393 3.251729 CCAAATCCACCTAATCTCATGCG 59.748 47.826 0.00 0.00 0.00 4.73
2261 2394 2.175878 ATCCACCTAATCTCATGCGC 57.824 50.000 0.00 0.00 0.00 6.09
2262 2395 0.106708 TCCACCTAATCTCATGCGCC 59.893 55.000 4.18 0.00 0.00 6.53
2264 2397 1.544093 CCACCTAATCTCATGCGCCAT 60.544 52.381 4.18 0.00 0.00 4.40
2265 2398 1.534163 CACCTAATCTCATGCGCCATG 59.466 52.381 4.18 9.25 42.60 3.66
2266 2399 0.520404 CCTAATCTCATGCGCCATGC 59.480 55.000 4.18 0.00 41.18 4.06
2295 2428 3.204827 CAGCCATGCAGTACGGGC 61.205 66.667 7.74 7.74 46.77 6.13
2316 2475 6.030228 GGGCGTGATTTTGAGAAGAATAAAG 58.970 40.000 0.00 0.00 0.00 1.85
2376 2551 2.881074 CTGTGTTACCATGGAGAGACG 58.119 52.381 21.47 7.59 0.00 4.18
2389 2564 2.824341 GGAGAGACGGGAAGTTGTAAGA 59.176 50.000 0.00 0.00 0.00 2.10
2427 4801 9.915629 GATCAATAATTACGAATCTACACTCCT 57.084 33.333 0.00 0.00 0.00 3.69
2478 4856 2.030274 TCATCGGTACATAGATGCCACG 60.030 50.000 15.87 0.00 42.76 4.94
2507 4885 2.235402 AGTGGTCCGTTCGGTGATATTT 59.765 45.455 11.04 0.00 0.00 1.40
2508 4886 3.004862 GTGGTCCGTTCGGTGATATTTT 58.995 45.455 11.04 0.00 0.00 1.82
2543 4921 3.190535 GCGCCTGATTTTGTCCTTCTTAA 59.809 43.478 0.00 0.00 0.00 1.85
2564 4942 0.603569 TCTTTGTCAGAGTCGGAGCC 59.396 55.000 0.00 0.00 0.00 4.70
2588 4966 2.979676 TTTGGTCGCAGCTGGCTG 60.980 61.111 17.12 17.16 46.15 4.85
2597 4975 1.796617 CGCAGCTGGCTGAATTTTAGC 60.797 52.381 24.40 4.66 46.30 3.09
2598 4976 1.203052 GCAGCTGGCTGAATTTTAGCA 59.797 47.619 24.40 1.46 46.30 3.49
2599 4977 2.872370 CAGCTGGCTGAATTTTAGCAC 58.128 47.619 16.59 5.40 46.30 4.40
2608 4986 5.160641 GCTGAATTTTAGCACGGATTTTCA 58.839 37.500 8.19 0.00 40.81 2.69
2616 4994 4.946784 AGCACGGATTTTCATACAACTC 57.053 40.909 0.00 0.00 0.00 3.01
2619 4997 4.006989 CACGGATTTTCATACAACTCCCA 58.993 43.478 0.00 0.00 0.00 4.37
2635 5013 2.232452 CTCCCAATGGCCTCTATAGTCG 59.768 54.545 3.32 0.00 0.00 4.18
2642 5020 2.225041 TGGCCTCTATAGTCGCCTACAT 60.225 50.000 24.04 0.00 42.15 2.29
2672 5050 1.142262 AGTGTTTGCTCGGGGTTTAGT 59.858 47.619 0.00 0.00 0.00 2.24
2685 5063 3.537580 GGGTTTAGTAATGGCGATGACA 58.462 45.455 0.00 0.00 0.00 3.58
2717 5095 3.253955 GTGACAACGATGGCGCTT 58.746 55.556 7.64 0.00 42.08 4.68
2725 5103 2.482374 GATGGCGCTTGTGTCTGC 59.518 61.111 7.64 0.00 0.00 4.26
2731 5109 2.221676 CGCTTGTGTCTGCGTGTTA 58.778 52.632 0.00 0.00 46.09 2.41
2750 5128 2.262774 ATCTTGGCGAGCCCCTCTTG 62.263 60.000 12.05 0.00 34.56 3.02
2762 5140 2.571548 CCTCTTGGGAATGGTGTGC 58.428 57.895 0.00 0.00 37.23 4.57
2763 5141 0.251297 CCTCTTGGGAATGGTGTGCA 60.251 55.000 0.00 0.00 37.23 4.57
2767 5145 0.975135 TTGGGAATGGTGTGCATTGG 59.025 50.000 0.00 0.00 0.00 3.16
2781 5159 2.819019 TGCATTGGGTATCTTGTGTGTG 59.181 45.455 0.00 0.00 0.00 3.82
2785 5163 0.321298 GGGTATCTTGTGTGTGCCGT 60.321 55.000 0.00 0.00 0.00 5.68
2789 5167 1.229428 ATCTTGTGTGTGCCGTTCAG 58.771 50.000 0.00 0.00 0.00 3.02
2790 5168 0.107897 TCTTGTGTGTGCCGTTCAGT 60.108 50.000 0.00 0.00 0.00 3.41
2796 5174 1.202710 TGTGTGCCGTTCAGTGGTTAT 60.203 47.619 0.00 0.00 0.00 1.89
2879 5261 9.231297 TCGATTGACCAATTTTCTTCTTCTTAT 57.769 29.630 0.00 0.00 0.00 1.73
2905 5287 2.487762 TGCAGAAATCCCGACATTTCAC 59.512 45.455 16.66 10.94 42.86 3.18
2910 5292 5.630680 CAGAAATCCCGACATTTCACAAAAG 59.369 40.000 16.66 2.11 42.86 2.27
2917 5299 4.041723 CGACATTTCACAAAAGGAACCAC 58.958 43.478 0.00 0.00 30.85 4.16
2920 5302 4.709397 ACATTTCACAAAAGGAACCACTGA 59.291 37.500 0.00 0.00 30.85 3.41
2940 5322 3.539338 AAAAAGAAGGTGCTGGGCT 57.461 47.368 0.00 0.00 0.00 5.19
2976 5358 0.666577 GTCTCCACGGACAAACCTCG 60.667 60.000 0.00 0.00 36.35 4.63
2990 5397 0.031414 ACCTCGGCCCAGTACCTATT 60.031 55.000 0.00 0.00 0.00 1.73
2996 5403 1.844497 GGCCCAGTACCTATTGACCTT 59.156 52.381 0.00 0.00 0.00 3.50
2998 5405 2.158798 GCCCAGTACCTATTGACCTTCC 60.159 54.545 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.685276 ACATATTTCAGAAGACATATCACCAAA 57.315 29.630 0.00 0.00 27.33 3.28
5 6 9.685276 AACATATTTCAGAAGACATATCACCAA 57.315 29.630 0.00 0.00 27.33 3.67
6 7 9.685276 AAACATATTTCAGAAGACATATCACCA 57.315 29.630 0.00 0.00 27.33 4.17
14 15 9.942850 TCACTGATAAACATATTTCAGAAGACA 57.057 29.630 5.84 0.00 0.00 3.41
27 28 9.342308 TCACTTTCTTTTCTCACTGATAAACAT 57.658 29.630 0.00 0.00 0.00 2.71
28 29 8.731275 TCACTTTCTTTTCTCACTGATAAACA 57.269 30.769 0.00 0.00 0.00 2.83
31 32 9.613428 TCTTTCACTTTCTTTTCTCACTGATAA 57.387 29.630 0.00 0.00 0.00 1.75
32 33 9.613428 TTCTTTCACTTTCTTTTCTCACTGATA 57.387 29.630 0.00 0.00 0.00 2.15
33 34 8.511604 TTCTTTCACTTTCTTTTCTCACTGAT 57.488 30.769 0.00 0.00 0.00 2.90
34 35 7.921786 TTCTTTCACTTTCTTTTCTCACTGA 57.078 32.000 0.00 0.00 0.00 3.41
35 36 8.970691 TTTTCTTTCACTTTCTTTTCTCACTG 57.029 30.769 0.00 0.00 0.00 3.66
36 37 9.411801 GTTTTTCTTTCACTTTCTTTTCTCACT 57.588 29.630 0.00 0.00 0.00 3.41
37 38 9.191995 TGTTTTTCTTTCACTTTCTTTTCTCAC 57.808 29.630 0.00 0.00 0.00 3.51
38 39 9.410556 CTGTTTTTCTTTCACTTTCTTTTCTCA 57.589 29.630 0.00 0.00 0.00 3.27
39 40 9.411801 ACTGTTTTTCTTTCACTTTCTTTTCTC 57.588 29.630 0.00 0.00 0.00 2.87
64 65 9.760660 GCAGTGCATAAAGTAGCAATAATATAC 57.239 33.333 11.09 0.00 43.20 1.47
65 66 8.655970 CGCAGTGCATAAAGTAGCAATAATATA 58.344 33.333 16.83 0.00 43.20 0.86
66 67 7.387673 TCGCAGTGCATAAAGTAGCAATAATAT 59.612 33.333 16.83 0.00 43.20 1.28
67 68 6.704050 TCGCAGTGCATAAAGTAGCAATAATA 59.296 34.615 16.83 0.00 43.20 0.98
68 69 5.527214 TCGCAGTGCATAAAGTAGCAATAAT 59.473 36.000 16.83 0.00 43.20 1.28
69 70 4.873259 TCGCAGTGCATAAAGTAGCAATAA 59.127 37.500 16.83 0.00 43.20 1.40
70 71 4.438148 TCGCAGTGCATAAAGTAGCAATA 58.562 39.130 16.83 0.00 43.20 1.90
71 72 3.270027 TCGCAGTGCATAAAGTAGCAAT 58.730 40.909 16.83 0.00 43.20 3.56
72 73 2.694213 TCGCAGTGCATAAAGTAGCAA 58.306 42.857 16.83 0.00 43.20 3.91
73 74 2.378445 TCGCAGTGCATAAAGTAGCA 57.622 45.000 16.83 0.00 38.65 3.49
74 75 3.370978 TCTTTCGCAGTGCATAAAGTAGC 59.629 43.478 26.74 0.00 34.73 3.58
75 76 5.530519 TTCTTTCGCAGTGCATAAAGTAG 57.469 39.130 26.74 12.56 34.73 2.57
76 77 5.933187 TTTCTTTCGCAGTGCATAAAGTA 57.067 34.783 26.74 19.97 34.73 2.24
77 78 4.829064 TTTCTTTCGCAGTGCATAAAGT 57.171 36.364 26.74 0.00 34.73 2.66
78 79 6.695292 AATTTTCTTTCGCAGTGCATAAAG 57.305 33.333 24.15 24.15 34.55 1.85
79 80 6.073873 CCAAATTTTCTTTCGCAGTGCATAAA 60.074 34.615 16.83 13.42 0.00 1.40
80 81 5.404968 CCAAATTTTCTTTCGCAGTGCATAA 59.595 36.000 16.83 5.83 0.00 1.90
81 82 4.922692 CCAAATTTTCTTTCGCAGTGCATA 59.077 37.500 16.83 0.00 0.00 3.14
82 83 3.742369 CCAAATTTTCTTTCGCAGTGCAT 59.258 39.130 16.83 0.00 0.00 3.96
83 84 3.122297 CCAAATTTTCTTTCGCAGTGCA 58.878 40.909 16.83 0.00 0.00 4.57
84 85 3.380142 TCCAAATTTTCTTTCGCAGTGC 58.620 40.909 4.58 4.58 0.00 4.40
85 86 5.221880 TCATCCAAATTTTCTTTCGCAGTG 58.778 37.500 0.00 0.00 0.00 3.66
86 87 5.452078 TCATCCAAATTTTCTTTCGCAGT 57.548 34.783 0.00 0.00 0.00 4.40
87 88 6.768029 TTTCATCCAAATTTTCTTTCGCAG 57.232 33.333 0.00 0.00 0.00 5.18
88 89 8.824159 TTATTTCATCCAAATTTTCTTTCGCA 57.176 26.923 0.00 0.00 36.09 5.10
100 101 9.253832 ACCACATCAGTATTTATTTCATCCAAA 57.746 29.630 0.00 0.00 0.00 3.28
101 102 8.821686 ACCACATCAGTATTTATTTCATCCAA 57.178 30.769 0.00 0.00 0.00 3.53
102 103 8.685427 CAACCACATCAGTATTTATTTCATCCA 58.315 33.333 0.00 0.00 0.00 3.41
103 104 8.686334 ACAACCACATCAGTATTTATTTCATCC 58.314 33.333 0.00 0.00 0.00 3.51
105 106 9.859427 CAACAACCACATCAGTATTTATTTCAT 57.141 29.630 0.00 0.00 0.00 2.57
106 107 9.072375 TCAACAACCACATCAGTATTTATTTCA 57.928 29.630 0.00 0.00 0.00 2.69
107 108 9.341899 GTCAACAACCACATCAGTATTTATTTC 57.658 33.333 0.00 0.00 0.00 2.17
108 109 8.020819 CGTCAACAACCACATCAGTATTTATTT 58.979 33.333 0.00 0.00 0.00 1.40
109 110 7.389330 TCGTCAACAACCACATCAGTATTTATT 59.611 33.333 0.00 0.00 0.00 1.40
110 111 6.876789 TCGTCAACAACCACATCAGTATTTAT 59.123 34.615 0.00 0.00 0.00 1.40
111 112 6.146510 GTCGTCAACAACCACATCAGTATTTA 59.853 38.462 0.00 0.00 0.00 1.40
112 113 5.049680 GTCGTCAACAACCACATCAGTATTT 60.050 40.000 0.00 0.00 0.00 1.40
113 114 4.451096 GTCGTCAACAACCACATCAGTATT 59.549 41.667 0.00 0.00 0.00 1.89
114 115 3.994392 GTCGTCAACAACCACATCAGTAT 59.006 43.478 0.00 0.00 0.00 2.12
115 116 3.069016 AGTCGTCAACAACCACATCAGTA 59.931 43.478 0.00 0.00 0.00 2.74
116 117 2.158957 AGTCGTCAACAACCACATCAGT 60.159 45.455 0.00 0.00 0.00 3.41
117 118 2.483876 AGTCGTCAACAACCACATCAG 58.516 47.619 0.00 0.00 0.00 2.90
118 119 2.613026 AGTCGTCAACAACCACATCA 57.387 45.000 0.00 0.00 0.00 3.07
119 120 3.963383 AAAGTCGTCAACAACCACATC 57.037 42.857 0.00 0.00 0.00 3.06
120 121 3.945285 AGAAAAGTCGTCAACAACCACAT 59.055 39.130 0.00 0.00 0.00 3.21
121 122 3.340034 AGAAAAGTCGTCAACAACCACA 58.660 40.909 0.00 0.00 0.00 4.17
122 123 4.340263 GAAGAAAAGTCGTCAACAACCAC 58.660 43.478 0.00 0.00 32.98 4.16
123 124 3.375922 GGAAGAAAAGTCGTCAACAACCA 59.624 43.478 0.00 0.00 34.27 3.67
124 125 3.375922 TGGAAGAAAAGTCGTCAACAACC 59.624 43.478 0.00 0.00 34.27 3.77
125 126 4.331717 TCTGGAAGAAAAGTCGTCAACAAC 59.668 41.667 0.00 0.00 42.31 3.32
126 127 4.509616 TCTGGAAGAAAAGTCGTCAACAA 58.490 39.130 0.00 0.00 42.31 2.83
127 128 4.131649 TCTGGAAGAAAAGTCGTCAACA 57.868 40.909 0.00 0.00 42.31 3.33
140 141 5.762179 TTTCTCCTAGCATTTCTGGAAGA 57.238 39.130 0.00 0.00 44.68 2.87
141 142 7.554118 TGTTATTTCTCCTAGCATTTCTGGAAG 59.446 37.037 0.00 0.00 0.00 3.46
142 143 7.402054 TGTTATTTCTCCTAGCATTTCTGGAA 58.598 34.615 0.00 0.00 0.00 3.53
143 144 6.957631 TGTTATTTCTCCTAGCATTTCTGGA 58.042 36.000 0.00 0.00 0.00 3.86
144 145 7.554118 TCTTGTTATTTCTCCTAGCATTTCTGG 59.446 37.037 0.00 0.00 0.00 3.86
145 146 8.498054 TCTTGTTATTTCTCCTAGCATTTCTG 57.502 34.615 0.00 0.00 0.00 3.02
146 147 9.336171 GATCTTGTTATTTCTCCTAGCATTTCT 57.664 33.333 0.00 0.00 0.00 2.52
147 148 9.336171 AGATCTTGTTATTTCTCCTAGCATTTC 57.664 33.333 0.00 0.00 0.00 2.17
148 149 9.118300 CAGATCTTGTTATTTCTCCTAGCATTT 57.882 33.333 0.00 0.00 0.00 2.32
149 150 7.228308 GCAGATCTTGTTATTTCTCCTAGCATT 59.772 37.037 0.00 0.00 0.00 3.56
150 151 6.709846 GCAGATCTTGTTATTTCTCCTAGCAT 59.290 38.462 0.00 0.00 0.00 3.79
151 152 6.051717 GCAGATCTTGTTATTTCTCCTAGCA 58.948 40.000 0.00 0.00 0.00 3.49
152 153 6.051717 TGCAGATCTTGTTATTTCTCCTAGC 58.948 40.000 0.00 0.00 0.00 3.42
153 154 7.714377 ACATGCAGATCTTGTTATTTCTCCTAG 59.286 37.037 0.00 0.00 29.82 3.02
154 155 7.496920 CACATGCAGATCTTGTTATTTCTCCTA 59.503 37.037 0.00 0.00 31.52 2.94
155 156 6.318144 CACATGCAGATCTTGTTATTTCTCCT 59.682 38.462 0.00 0.00 31.52 3.69
156 157 6.094603 ACACATGCAGATCTTGTTATTTCTCC 59.905 38.462 0.00 0.00 31.52 3.71
157 158 7.081526 ACACATGCAGATCTTGTTATTTCTC 57.918 36.000 0.00 0.00 31.52 2.87
158 159 7.458409 AACACATGCAGATCTTGTTATTTCT 57.542 32.000 7.76 0.00 31.52 2.52
159 160 8.524870 AAAACACATGCAGATCTTGTTATTTC 57.475 30.769 9.55 0.00 31.52 2.17
160 161 8.891671 AAAAACACATGCAGATCTTGTTATTT 57.108 26.923 9.55 9.40 31.52 1.40
195 196 4.201970 TGGACTTTGAACTAAAACCGCAAG 60.202 41.667 0.00 0.00 31.57 4.01
196 197 3.695060 TGGACTTTGAACTAAAACCGCAA 59.305 39.130 0.00 0.00 31.57 4.85
197 198 3.280295 TGGACTTTGAACTAAAACCGCA 58.720 40.909 0.00 0.00 31.57 5.69
198 199 3.852205 GCTGGACTTTGAACTAAAACCGC 60.852 47.826 0.00 0.00 31.57 5.68
199 200 3.314080 TGCTGGACTTTGAACTAAAACCG 59.686 43.478 0.00 0.00 31.57 4.44
200 201 4.338400 ACTGCTGGACTTTGAACTAAAACC 59.662 41.667 0.00 0.00 0.00 3.27
201 202 5.297029 AGACTGCTGGACTTTGAACTAAAAC 59.703 40.000 0.00 0.00 0.00 2.43
202 203 5.437060 AGACTGCTGGACTTTGAACTAAAA 58.563 37.500 0.00 0.00 0.00 1.52
203 204 5.036117 AGACTGCTGGACTTTGAACTAAA 57.964 39.130 0.00 0.00 0.00 1.85
204 205 4.689612 AGACTGCTGGACTTTGAACTAA 57.310 40.909 0.00 0.00 0.00 2.24
205 206 5.724328 CATAGACTGCTGGACTTTGAACTA 58.276 41.667 0.00 0.00 0.00 2.24
206 207 4.573900 CATAGACTGCTGGACTTTGAACT 58.426 43.478 0.00 0.00 0.00 3.01
207 208 4.935885 CATAGACTGCTGGACTTTGAAC 57.064 45.455 0.00 0.00 0.00 3.18
226 227 9.369904 CCAAAGCAATTTAGTAAATACAAGCAT 57.630 29.630 8.54 2.39 0.00 3.79
227 228 8.580720 TCCAAAGCAATTTAGTAAATACAAGCA 58.419 29.630 8.54 0.00 0.00 3.91
228 229 8.860128 GTCCAAAGCAATTTAGTAAATACAAGC 58.140 33.333 8.54 10.26 0.00 4.01
229 230 9.906660 TGTCCAAAGCAATTTAGTAAATACAAG 57.093 29.630 8.54 1.76 0.00 3.16
244 245 9.625747 TCAGAATATATTGTATGTCCAAAGCAA 57.374 29.630 1.78 0.00 0.00 3.91
245 246 9.625747 TTCAGAATATATTGTATGTCCAAAGCA 57.374 29.630 1.78 0.00 0.00 3.91
265 266 9.703892 CCCATGTGTACAAATAAAAATTCAGAA 57.296 29.630 0.00 0.00 0.00 3.02
266 267 8.865090 ACCCATGTGTACAAATAAAAATTCAGA 58.135 29.630 0.00 0.00 0.00 3.27
267 268 9.139174 GACCCATGTGTACAAATAAAAATTCAG 57.861 33.333 0.00 0.00 0.00 3.02
268 269 8.091449 GGACCCATGTGTACAAATAAAAATTCA 58.909 33.333 0.00 0.00 0.00 2.57
269 270 7.547722 GGGACCCATGTGTACAAATAAAAATTC 59.452 37.037 5.33 0.00 0.00 2.17
270 271 7.016661 TGGGACCCATGTGTACAAATAAAAATT 59.983 33.333 9.95 0.00 0.00 1.82
271 272 6.498651 TGGGACCCATGTGTACAAATAAAAAT 59.501 34.615 9.95 0.00 0.00 1.82
272 273 5.839063 TGGGACCCATGTGTACAAATAAAAA 59.161 36.000 9.95 0.00 0.00 1.94
273 274 5.394738 TGGGACCCATGTGTACAAATAAAA 58.605 37.500 9.95 0.00 0.00 1.52
274 275 4.999310 TGGGACCCATGTGTACAAATAAA 58.001 39.130 9.95 0.00 0.00 1.40
275 276 4.659529 TGGGACCCATGTGTACAAATAA 57.340 40.909 9.95 0.00 0.00 1.40
276 277 4.871871 ATGGGACCCATGTGTACAAATA 57.128 40.909 25.99 0.00 43.39 1.40
277 278 3.756082 ATGGGACCCATGTGTACAAAT 57.244 42.857 25.99 0.00 43.39 2.32
278 279 3.534357 AATGGGACCCATGTGTACAAA 57.466 42.857 27.21 0.00 44.40 2.83
279 280 3.534357 AAATGGGACCCATGTGTACAA 57.466 42.857 27.21 0.00 44.40 2.41
280 281 3.161067 CAAAATGGGACCCATGTGTACA 58.839 45.455 27.21 0.00 44.40 2.90
281 282 3.161866 ACAAAATGGGACCCATGTGTAC 58.838 45.455 29.47 0.00 44.40 2.90
282 283 3.426615 GACAAAATGGGACCCATGTGTA 58.573 45.455 30.13 5.84 44.40 2.90
283 284 2.247358 GACAAAATGGGACCCATGTGT 58.753 47.619 30.35 30.35 44.40 3.72
284 285 1.202114 CGACAAAATGGGACCCATGTG 59.798 52.381 27.21 26.41 44.40 3.21
285 286 1.203001 ACGACAAAATGGGACCCATGT 60.203 47.619 27.21 21.54 44.40 3.21
286 287 1.472480 GACGACAAAATGGGACCCATG 59.528 52.381 27.21 18.31 44.40 3.66
288 289 0.250989 GGACGACAAAATGGGACCCA 60.251 55.000 17.73 17.73 38.19 4.51
289 290 0.963856 GGGACGACAAAATGGGACCC 60.964 60.000 2.45 2.45 0.00 4.46
290 291 0.250989 TGGGACGACAAAATGGGACC 60.251 55.000 0.00 0.00 0.00 4.46
291 292 0.879090 GTGGGACGACAAAATGGGAC 59.121 55.000 0.00 0.00 0.00 4.46
292 293 0.250989 GGTGGGACGACAAAATGGGA 60.251 55.000 0.00 0.00 0.00 4.37
293 294 1.582610 CGGTGGGACGACAAAATGGG 61.583 60.000 0.00 0.00 35.47 4.00
294 295 1.873165 CGGTGGGACGACAAAATGG 59.127 57.895 0.00 0.00 35.47 3.16
295 296 1.209127 GCGGTGGGACGACAAAATG 59.791 57.895 0.00 0.00 35.47 2.32
296 297 1.228003 TGCGGTGGGACGACAAAAT 60.228 52.632 0.00 0.00 35.47 1.82
297 298 1.890041 CTGCGGTGGGACGACAAAA 60.890 57.895 0.00 0.00 35.47 2.44
298 299 2.280524 CTGCGGTGGGACGACAAA 60.281 61.111 0.00 0.00 35.47 2.83
299 300 4.308458 CCTGCGGTGGGACGACAA 62.308 66.667 0.00 0.00 35.47 3.18
310 311 3.953775 ATATTCGGGGCCCTGCGG 61.954 66.667 27.42 10.99 0.00 5.69
311 312 2.107041 TACATATTCGGGGCCCTGCG 62.107 60.000 27.42 20.16 0.00 5.18
312 313 0.328258 ATACATATTCGGGGCCCTGC 59.672 55.000 27.42 6.89 0.00 4.85
313 314 1.340017 CCATACATATTCGGGGCCCTG 60.340 57.143 26.30 26.30 0.00 4.45
314 315 0.991920 CCATACATATTCGGGGCCCT 59.008 55.000 24.38 3.55 0.00 5.19
315 316 0.988832 TCCATACATATTCGGGGCCC 59.011 55.000 15.76 15.76 0.00 5.80
316 317 1.339727 GGTCCATACATATTCGGGGCC 60.340 57.143 0.00 0.00 36.03 5.80
317 318 1.674817 CGGTCCATACATATTCGGGGC 60.675 57.143 0.00 0.00 0.00 5.80
318 319 1.066430 CCGGTCCATACATATTCGGGG 60.066 57.143 0.00 0.00 33.27 5.73
319 320 1.674817 GCCGGTCCATACATATTCGGG 60.675 57.143 1.90 0.00 36.87 5.14
320 321 1.674817 GGCCGGTCCATACATATTCGG 60.675 57.143 1.90 0.00 39.07 4.30
321 322 1.674817 GGGCCGGTCCATACATATTCG 60.675 57.143 23.50 0.00 36.21 3.34
322 323 1.628846 AGGGCCGGTCCATACATATTC 59.371 52.381 30.48 0.00 36.21 1.75
323 324 1.351017 CAGGGCCGGTCCATACATATT 59.649 52.381 30.48 0.00 36.21 1.28
324 325 0.984230 CAGGGCCGGTCCATACATAT 59.016 55.000 30.48 0.00 36.21 1.78
325 326 0.105401 TCAGGGCCGGTCCATACATA 60.105 55.000 30.48 1.97 36.21 2.29
326 327 0.986019 TTCAGGGCCGGTCCATACAT 60.986 55.000 30.48 1.79 36.21 2.29
327 328 1.202099 TTTCAGGGCCGGTCCATACA 61.202 55.000 30.48 5.23 36.21 2.29
328 329 0.463833 CTTTCAGGGCCGGTCCATAC 60.464 60.000 30.48 0.00 36.21 2.39
329 330 1.632018 CCTTTCAGGGCCGGTCCATA 61.632 60.000 30.48 12.30 36.21 2.74
330 331 2.677228 CTTTCAGGGCCGGTCCAT 59.323 61.111 30.48 12.53 36.21 3.41
331 332 3.646715 CCTTTCAGGGCCGGTCCA 61.647 66.667 30.48 3.77 36.21 4.02
332 333 3.327404 TCCTTTCAGGGCCGGTCC 61.327 66.667 20.43 20.43 35.59 4.46
333 334 2.269241 CTCCTTTCAGGGCCGGTC 59.731 66.667 1.90 0.00 35.59 4.79
334 335 2.529389 ACTCCTTTCAGGGCCGGT 60.529 61.111 1.90 0.00 35.59 5.28
335 336 2.045926 CACTCCTTTCAGGGCCGG 60.046 66.667 0.00 0.00 35.59 6.13
336 337 1.078848 CTCACTCCTTTCAGGGCCG 60.079 63.158 0.00 0.00 35.59 6.13
337 338 0.693049 TTCTCACTCCTTTCAGGGCC 59.307 55.000 0.00 0.00 35.59 5.80
338 339 2.568623 TTTCTCACTCCTTTCAGGGC 57.431 50.000 0.00 0.00 35.59 5.19
339 340 7.829211 TGTTAATATTTCTCACTCCTTTCAGGG 59.171 37.037 0.00 0.00 35.59 4.45
340 341 8.669243 GTGTTAATATTTCTCACTCCTTTCAGG 58.331 37.037 0.00 0.00 36.46 3.86
341 342 9.219603 TGTGTTAATATTTCTCACTCCTTTCAG 57.780 33.333 14.03 0.00 0.00 3.02
342 343 9.567776 TTGTGTTAATATTTCTCACTCCTTTCA 57.432 29.630 14.03 0.00 0.00 2.69
343 344 9.827411 GTTGTGTTAATATTTCTCACTCCTTTC 57.173 33.333 14.03 0.00 0.00 2.62
344 345 8.793592 GGTTGTGTTAATATTTCTCACTCCTTT 58.206 33.333 14.03 0.00 0.00 3.11
345 346 7.119262 CGGTTGTGTTAATATTTCTCACTCCTT 59.881 37.037 14.03 0.00 0.00 3.36
346 347 6.594159 CGGTTGTGTTAATATTTCTCACTCCT 59.406 38.462 14.03 0.00 0.00 3.69
347 348 6.592607 TCGGTTGTGTTAATATTTCTCACTCC 59.407 38.462 14.03 13.97 0.00 3.85
348 349 7.591006 TCGGTTGTGTTAATATTTCTCACTC 57.409 36.000 14.03 9.47 0.00 3.51
349 350 9.661563 TTATCGGTTGTGTTAATATTTCTCACT 57.338 29.630 14.03 2.10 0.00 3.41
359 360 9.751542 TCAATTGTTTTTATCGGTTGTGTTAAT 57.248 25.926 5.13 0.00 0.00 1.40
360 361 9.751542 ATCAATTGTTTTTATCGGTTGTGTTAA 57.248 25.926 5.13 0.00 0.00 2.01
361 362 9.751542 AATCAATTGTTTTTATCGGTTGTGTTA 57.248 25.926 5.13 0.00 0.00 2.41
362 363 8.655651 AATCAATTGTTTTTATCGGTTGTGTT 57.344 26.923 5.13 0.00 0.00 3.32
363 364 8.655651 AAATCAATTGTTTTTATCGGTTGTGT 57.344 26.923 5.13 0.00 0.00 3.72
364 365 9.928236 AAAAATCAATTGTTTTTATCGGTTGTG 57.072 25.926 21.61 0.00 37.09 3.33
387 388 3.547746 AGAAGTGGCCGAGTGTTAAAAA 58.452 40.909 0.00 0.00 0.00 1.94
388 389 3.202829 AGAAGTGGCCGAGTGTTAAAA 57.797 42.857 0.00 0.00 0.00 1.52
389 390 2.922740 AGAAGTGGCCGAGTGTTAAA 57.077 45.000 0.00 0.00 0.00 1.52
390 391 2.922740 AAGAAGTGGCCGAGTGTTAA 57.077 45.000 0.00 0.00 0.00 2.01
391 392 2.895404 ACTAAGAAGTGGCCGAGTGTTA 59.105 45.455 0.00 0.00 33.57 2.41
392 393 1.692519 ACTAAGAAGTGGCCGAGTGTT 59.307 47.619 0.00 0.00 33.57 3.32
393 394 1.339097 ACTAAGAAGTGGCCGAGTGT 58.661 50.000 0.00 0.00 33.57 3.55
394 395 2.457366 AACTAAGAAGTGGCCGAGTG 57.543 50.000 0.00 0.00 35.62 3.51
395 396 3.181489 CGATAACTAAGAAGTGGCCGAGT 60.181 47.826 0.00 0.00 35.62 4.18
396 397 3.066342 TCGATAACTAAGAAGTGGCCGAG 59.934 47.826 0.00 0.00 35.62 4.63
397 398 3.018856 TCGATAACTAAGAAGTGGCCGA 58.981 45.455 0.00 0.00 35.62 5.54
398 399 3.431922 TCGATAACTAAGAAGTGGCCG 57.568 47.619 0.00 0.00 35.62 6.13
399 400 4.945246 TCATCGATAACTAAGAAGTGGCC 58.055 43.478 0.00 0.00 35.62 5.36
400 401 6.903883 TTTCATCGATAACTAAGAAGTGGC 57.096 37.500 0.00 0.00 35.62 5.01
401 402 8.717821 TGTTTTTCATCGATAACTAAGAAGTGG 58.282 33.333 0.00 0.00 35.62 4.00
402 403 9.530129 GTGTTTTTCATCGATAACTAAGAAGTG 57.470 33.333 0.00 0.00 35.62 3.16
403 404 9.268268 TGTGTTTTTCATCGATAACTAAGAAGT 57.732 29.630 0.00 0.00 37.65 3.01
409 410 9.647797 ACTGTATGTGTTTTTCATCGATAACTA 57.352 29.630 0.00 0.00 0.00 2.24
410 411 8.547967 ACTGTATGTGTTTTTCATCGATAACT 57.452 30.769 0.00 0.00 0.00 2.24
414 415 9.607285 GTTTTACTGTATGTGTTTTTCATCGAT 57.393 29.630 0.00 0.00 0.00 3.59
415 416 8.613482 TGTTTTACTGTATGTGTTTTTCATCGA 58.387 29.630 0.00 0.00 0.00 3.59
416 417 8.775220 TGTTTTACTGTATGTGTTTTTCATCG 57.225 30.769 0.00 0.00 0.00 3.84
452 453 9.510062 TCCCCTTAATTCAGTCTACCTTAAATA 57.490 33.333 0.00 0.00 0.00 1.40
453 454 8.401955 TCCCCTTAATTCAGTCTACCTTAAAT 57.598 34.615 0.00 0.00 0.00 1.40
454 455 7.817910 TCCCCTTAATTCAGTCTACCTTAAA 57.182 36.000 0.00 0.00 0.00 1.52
455 456 8.272173 CAATCCCCTTAATTCAGTCTACCTTAA 58.728 37.037 0.00 0.00 0.00 1.85
456 457 7.147373 CCAATCCCCTTAATTCAGTCTACCTTA 60.147 40.741 0.00 0.00 0.00 2.69
457 458 6.353951 CCAATCCCCTTAATTCAGTCTACCTT 60.354 42.308 0.00 0.00 0.00 3.50
458 459 5.132816 CCAATCCCCTTAATTCAGTCTACCT 59.867 44.000 0.00 0.00 0.00 3.08
459 460 5.104067 ACCAATCCCCTTAATTCAGTCTACC 60.104 44.000 0.00 0.00 0.00 3.18
460 461 6.002653 ACCAATCCCCTTAATTCAGTCTAC 57.997 41.667 0.00 0.00 0.00 2.59
461 462 7.947782 ATACCAATCCCCTTAATTCAGTCTA 57.052 36.000 0.00 0.00 0.00 2.59
462 463 6.848562 ATACCAATCCCCTTAATTCAGTCT 57.151 37.500 0.00 0.00 0.00 3.24
463 464 8.847196 GTTAATACCAATCCCCTTAATTCAGTC 58.153 37.037 0.00 0.00 0.00 3.51
464 465 7.783119 GGTTAATACCAATCCCCTTAATTCAGT 59.217 37.037 0.00 0.00 44.36 3.41
465 466 8.178313 GGTTAATACCAATCCCCTTAATTCAG 57.822 38.462 0.00 0.00 44.36 3.02
515 516 7.973388 GCATACCTTGAAAACATGCAAGTTATA 59.027 33.333 7.88 0.00 41.25 0.98
516 517 6.813152 GCATACCTTGAAAACATGCAAGTTAT 59.187 34.615 7.88 3.57 41.25 1.89
517 518 6.155827 GCATACCTTGAAAACATGCAAGTTA 58.844 36.000 7.88 1.68 41.25 2.24
518 519 4.990426 GCATACCTTGAAAACATGCAAGTT 59.010 37.500 0.51 0.51 41.25 2.66
519 520 4.039004 TGCATACCTTGAAAACATGCAAGT 59.961 37.500 5.15 0.00 46.47 3.16
520 521 4.558178 TGCATACCTTGAAAACATGCAAG 58.442 39.130 5.15 0.00 46.47 4.01
521 522 4.597404 TGCATACCTTGAAAACATGCAA 57.403 36.364 5.15 0.00 46.47 4.08
523 524 4.808558 TCTTGCATACCTTGAAAACATGC 58.191 39.130 0.00 0.00 41.81 4.06
524 525 7.712264 TTTTCTTGCATACCTTGAAAACATG 57.288 32.000 0.00 0.00 33.48 3.21
525 526 8.776470 CATTTTTCTTGCATACCTTGAAAACAT 58.224 29.630 0.00 0.00 36.68 2.71
526 527 7.226325 CCATTTTTCTTGCATACCTTGAAAACA 59.774 33.333 0.00 0.00 36.68 2.83
527 528 7.575365 CCATTTTTCTTGCATACCTTGAAAAC 58.425 34.615 0.00 0.00 36.68 2.43
528 529 6.204495 GCCATTTTTCTTGCATACCTTGAAAA 59.796 34.615 0.00 0.00 35.63 2.29
529 530 5.700373 GCCATTTTTCTTGCATACCTTGAAA 59.300 36.000 0.00 0.00 0.00 2.69
530 531 5.221601 TGCCATTTTTCTTGCATACCTTGAA 60.222 36.000 0.00 0.00 0.00 2.69
531 532 4.282957 TGCCATTTTTCTTGCATACCTTGA 59.717 37.500 0.00 0.00 0.00 3.02
532 533 4.389687 GTGCCATTTTTCTTGCATACCTTG 59.610 41.667 0.00 0.00 35.96 3.61
533 534 4.040217 TGTGCCATTTTTCTTGCATACCTT 59.960 37.500 0.00 0.00 35.96 3.50
534 535 3.577848 TGTGCCATTTTTCTTGCATACCT 59.422 39.130 0.00 0.00 35.96 3.08
535 536 3.924144 TGTGCCATTTTTCTTGCATACC 58.076 40.909 0.00 0.00 35.96 2.73
536 537 4.990426 ACTTGTGCCATTTTTCTTGCATAC 59.010 37.500 0.00 0.00 35.96 2.39
537 538 5.212532 ACTTGTGCCATTTTTCTTGCATA 57.787 34.783 0.00 0.00 35.96 3.14
538 539 4.075963 ACTTGTGCCATTTTTCTTGCAT 57.924 36.364 0.00 0.00 35.96 3.96
539 540 3.540314 ACTTGTGCCATTTTTCTTGCA 57.460 38.095 0.00 0.00 0.00 4.08
540 541 3.248363 GGAACTTGTGCCATTTTTCTTGC 59.752 43.478 0.00 0.00 0.00 4.01
541 542 4.440880 TGGAACTTGTGCCATTTTTCTTG 58.559 39.130 0.00 0.00 0.00 3.02
542 543 4.751767 TGGAACTTGTGCCATTTTTCTT 57.248 36.364 0.00 0.00 0.00 2.52
543 544 4.405358 TCTTGGAACTTGTGCCATTTTTCT 59.595 37.500 0.64 0.00 33.46 2.52
544 545 4.692228 TCTTGGAACTTGTGCCATTTTTC 58.308 39.130 0.64 0.00 33.46 2.29
545 546 4.696455 CTCTTGGAACTTGTGCCATTTTT 58.304 39.130 0.64 0.00 33.46 1.94
546 547 3.493176 GCTCTTGGAACTTGTGCCATTTT 60.493 43.478 0.64 0.00 33.46 1.82
547 548 2.036346 GCTCTTGGAACTTGTGCCATTT 59.964 45.455 0.64 0.00 33.46 2.32
548 549 1.615392 GCTCTTGGAACTTGTGCCATT 59.385 47.619 0.64 0.00 33.46 3.16
549 550 1.251251 GCTCTTGGAACTTGTGCCAT 58.749 50.000 0.64 0.00 33.46 4.40
550 551 0.106769 TGCTCTTGGAACTTGTGCCA 60.107 50.000 0.00 0.00 0.00 4.92
551 552 1.032014 TTGCTCTTGGAACTTGTGCC 58.968 50.000 0.00 0.00 0.00 5.01
552 553 2.869233 TTTGCTCTTGGAACTTGTGC 57.131 45.000 0.00 0.00 0.00 4.57
553 554 3.118542 GCTTTTGCTCTTGGAACTTGTG 58.881 45.455 0.00 0.00 43.35 3.33
554 555 3.443099 GCTTTTGCTCTTGGAACTTGT 57.557 42.857 0.00 0.00 43.35 3.16
563 564 7.469039 ATGTGTGCATTCAGCTTTTGCTCTT 62.469 40.000 12.13 1.89 42.98 2.85
564 565 6.062446 ATGTGTGCATTCAGCTTTTGCTCT 62.062 41.667 12.13 0.00 42.98 4.09
565 566 3.859627 ATGTGTGCATTCAGCTTTTGCTC 60.860 43.478 12.13 9.58 42.98 4.26
566 567 2.036733 ATGTGTGCATTCAGCTTTTGCT 59.963 40.909 12.13 0.00 44.74 3.91
567 568 1.855513 TGTGTGCATTCAGCTTTTGC 58.144 45.000 5.54 5.54 45.94 3.68
568 569 5.693104 ACTTAATGTGTGCATTCAGCTTTTG 59.307 36.000 0.00 0.00 43.61 2.44
569 570 5.846203 ACTTAATGTGTGCATTCAGCTTTT 58.154 33.333 0.00 0.00 43.61 2.27
570 571 5.458041 ACTTAATGTGTGCATTCAGCTTT 57.542 34.783 0.00 0.00 43.61 3.51
571 572 5.458041 AACTTAATGTGTGCATTCAGCTT 57.542 34.783 0.00 0.00 43.61 3.74
572 573 5.458041 AAACTTAATGTGTGCATTCAGCT 57.542 34.783 0.00 0.00 43.61 4.24
573 574 4.321745 CGAAACTTAATGTGTGCATTCAGC 59.678 41.667 0.00 0.00 43.61 4.26
574 575 5.340403 CACGAAACTTAATGTGTGCATTCAG 59.660 40.000 0.00 0.00 43.61 3.02
575 576 5.008118 TCACGAAACTTAATGTGTGCATTCA 59.992 36.000 0.00 0.00 43.61 2.57
576 577 5.339611 GTCACGAAACTTAATGTGTGCATTC 59.660 40.000 0.00 0.00 43.61 2.67
577 578 5.008613 AGTCACGAAACTTAATGTGTGCATT 59.991 36.000 0.00 0.00 46.14 3.56
578 579 4.515191 AGTCACGAAACTTAATGTGTGCAT 59.485 37.500 0.00 0.00 36.80 3.96
579 580 3.874543 AGTCACGAAACTTAATGTGTGCA 59.125 39.130 0.00 0.00 34.08 4.57
580 581 4.468095 AGTCACGAAACTTAATGTGTGC 57.532 40.909 0.00 0.00 34.08 4.57
581 582 7.847487 TCTTTAGTCACGAAACTTAATGTGTG 58.153 34.615 0.00 0.00 34.08 3.82
582 583 8.603242 ATCTTTAGTCACGAAACTTAATGTGT 57.397 30.769 0.00 0.00 34.08 3.72
586 587 9.543783 GGGATATCTTTAGTCACGAAACTTAAT 57.456 33.333 2.05 0.00 0.00 1.40
587 588 7.983484 GGGGATATCTTTAGTCACGAAACTTAA 59.017 37.037 2.05 0.00 0.00 1.85
588 589 7.124599 TGGGGATATCTTTAGTCACGAAACTTA 59.875 37.037 2.05 0.00 0.00 2.24
589 590 6.070424 TGGGGATATCTTTAGTCACGAAACTT 60.070 38.462 2.05 0.00 0.00 2.66
590 591 5.424252 TGGGGATATCTTTAGTCACGAAACT 59.576 40.000 2.05 0.00 0.00 2.66
591 592 5.667466 TGGGGATATCTTTAGTCACGAAAC 58.333 41.667 2.05 0.00 0.00 2.78
592 593 5.943349 TGGGGATATCTTTAGTCACGAAA 57.057 39.130 2.05 0.00 0.00 3.46
593 594 5.278808 CGATGGGGATATCTTTAGTCACGAA 60.279 44.000 2.05 0.00 0.00 3.85
594 595 4.217767 CGATGGGGATATCTTTAGTCACGA 59.782 45.833 2.05 0.00 0.00 4.35
595 596 4.022242 ACGATGGGGATATCTTTAGTCACG 60.022 45.833 2.05 0.00 0.00 4.35
596 597 5.470047 ACGATGGGGATATCTTTAGTCAC 57.530 43.478 2.05 0.00 0.00 3.67
597 598 6.072649 TGTACGATGGGGATATCTTTAGTCA 58.927 40.000 2.05 0.00 0.00 3.41
598 599 6.585695 TGTACGATGGGGATATCTTTAGTC 57.414 41.667 2.05 0.00 0.00 2.59
599 600 6.781014 TCTTGTACGATGGGGATATCTTTAGT 59.219 38.462 2.05 0.00 0.00 2.24
600 601 7.176865 TCTCTTGTACGATGGGGATATCTTTAG 59.823 40.741 2.05 0.00 0.00 1.85
601 602 7.008332 TCTCTTGTACGATGGGGATATCTTTA 58.992 38.462 2.05 0.00 0.00 1.85
602 603 5.839063 TCTCTTGTACGATGGGGATATCTTT 59.161 40.000 2.05 0.00 0.00 2.52
603 604 5.394738 TCTCTTGTACGATGGGGATATCTT 58.605 41.667 2.05 0.00 0.00 2.40
604 605 4.999310 TCTCTTGTACGATGGGGATATCT 58.001 43.478 2.05 0.00 0.00 1.98
605 606 5.723672 TTCTCTTGTACGATGGGGATATC 57.276 43.478 0.00 0.00 0.00 1.63
606 607 6.494666 TTTTCTCTTGTACGATGGGGATAT 57.505 37.500 0.00 0.00 0.00 1.63
607 608 5.943349 TTTTCTCTTGTACGATGGGGATA 57.057 39.130 0.00 0.00 0.00 2.59
608 609 4.837093 TTTTCTCTTGTACGATGGGGAT 57.163 40.909 0.00 0.00 0.00 3.85
609 610 4.627284 TTTTTCTCTTGTACGATGGGGA 57.373 40.909 0.00 0.00 0.00 4.81
651 652 9.927668 AGTGCACTGCTTTTTGTATTATTTAAT 57.072 25.926 20.97 0.00 0.00 1.40
652 653 9.757227 AAGTGCACTGCTTTTTGTATTATTTAA 57.243 25.926 22.49 0.00 0.00 1.52
653 654 9.405587 GAAGTGCACTGCTTTTTGTATTATTTA 57.594 29.630 22.49 0.00 0.00 1.40
654 655 7.114811 CGAAGTGCACTGCTTTTTGTATTATTT 59.885 33.333 22.49 0.00 0.00 1.40
655 656 6.582295 CGAAGTGCACTGCTTTTTGTATTATT 59.418 34.615 22.49 0.00 0.00 1.40
656 657 6.072728 TCGAAGTGCACTGCTTTTTGTATTAT 60.073 34.615 22.49 0.00 0.00 1.28
657 658 5.237561 TCGAAGTGCACTGCTTTTTGTATTA 59.762 36.000 22.49 0.00 0.00 0.98
658 659 4.036262 TCGAAGTGCACTGCTTTTTGTATT 59.964 37.500 22.49 0.00 0.00 1.89
659 660 3.563808 TCGAAGTGCACTGCTTTTTGTAT 59.436 39.130 22.49 0.00 0.00 2.29
660 661 2.939756 TCGAAGTGCACTGCTTTTTGTA 59.060 40.909 22.49 0.00 0.00 2.41
661 662 1.742831 TCGAAGTGCACTGCTTTTTGT 59.257 42.857 22.49 0.61 0.00 2.83
662 663 2.473530 TCGAAGTGCACTGCTTTTTG 57.526 45.000 22.49 8.31 0.00 2.44
663 664 2.682856 TCTTCGAAGTGCACTGCTTTTT 59.317 40.909 22.49 2.42 0.00 1.94
664 665 2.288666 TCTTCGAAGTGCACTGCTTTT 58.711 42.857 22.49 3.33 0.00 2.27
665 666 1.953559 TCTTCGAAGTGCACTGCTTT 58.046 45.000 22.49 3.80 0.00 3.51
666 667 1.599542 GTTCTTCGAAGTGCACTGCTT 59.400 47.619 22.49 4.26 0.00 3.91
667 668 1.221414 GTTCTTCGAAGTGCACTGCT 58.779 50.000 22.49 5.18 0.00 4.24
668 669 0.937304 TGTTCTTCGAAGTGCACTGC 59.063 50.000 22.49 18.89 0.00 4.40
669 670 4.449068 ACTTATGTTCTTCGAAGTGCACTG 59.551 41.667 22.49 9.21 31.05 3.66
670 671 4.449068 CACTTATGTTCTTCGAAGTGCACT 59.551 41.667 23.85 15.25 41.52 4.40
671 672 4.447724 TCACTTATGTTCTTCGAAGTGCAC 59.552 41.667 23.85 18.25 45.42 4.57
672 673 4.627058 TCACTTATGTTCTTCGAAGTGCA 58.373 39.130 23.85 21.73 45.42 4.57
673 674 5.591643 TTCACTTATGTTCTTCGAAGTGC 57.408 39.130 23.85 17.37 45.42 4.40
686 687 9.606631 GCCCTAGGAGATATAATTTCACTTATG 57.393 37.037 11.48 0.00 0.00 1.90
687 688 9.338968 TGCCCTAGGAGATATAATTTCACTTAT 57.661 33.333 11.48 0.00 0.00 1.73
688 689 8.736097 TGCCCTAGGAGATATAATTTCACTTA 57.264 34.615 11.48 0.00 0.00 2.24
689 690 7.633018 TGCCCTAGGAGATATAATTTCACTT 57.367 36.000 11.48 0.00 0.00 3.16
690 691 7.633018 TTGCCCTAGGAGATATAATTTCACT 57.367 36.000 11.48 0.00 0.00 3.41
691 692 8.691661 TTTTGCCCTAGGAGATATAATTTCAC 57.308 34.615 11.48 0.00 0.00 3.18
692 693 9.881773 ATTTTTGCCCTAGGAGATATAATTTCA 57.118 29.630 11.48 0.00 0.00 2.69
694 695 9.881773 TGATTTTTGCCCTAGGAGATATAATTT 57.118 29.630 11.48 0.00 0.00 1.82
698 699 9.959721 GTTATGATTTTTGCCCTAGGAGATATA 57.040 33.333 11.48 0.00 0.00 0.86
699 700 8.673251 AGTTATGATTTTTGCCCTAGGAGATAT 58.327 33.333 11.48 0.00 0.00 1.63
700 701 8.045720 AGTTATGATTTTTGCCCTAGGAGATA 57.954 34.615 11.48 0.00 0.00 1.98
701 702 6.915786 AGTTATGATTTTTGCCCTAGGAGAT 58.084 36.000 11.48 0.00 0.00 2.75
702 703 6.327386 AGTTATGATTTTTGCCCTAGGAGA 57.673 37.500 11.48 0.00 0.00 3.71
703 704 8.571336 CAATAGTTATGATTTTTGCCCTAGGAG 58.429 37.037 11.48 1.06 0.00 3.69
704 705 8.058847 ACAATAGTTATGATTTTTGCCCTAGGA 58.941 33.333 11.48 0.00 0.00 2.94
705 706 8.237811 ACAATAGTTATGATTTTTGCCCTAGG 57.762 34.615 0.06 0.06 0.00 3.02
708 709 8.567948 CGATACAATAGTTATGATTTTTGCCCT 58.432 33.333 0.00 0.00 0.00 5.19
709 710 8.564574 TCGATACAATAGTTATGATTTTTGCCC 58.435 33.333 0.00 0.00 0.00 5.36
710 711 9.944663 TTCGATACAATAGTTATGATTTTTGCC 57.055 29.630 0.00 0.00 0.00 4.52
721 722 9.478768 TGTGAAAACACTTCGATACAATAGTTA 57.521 29.630 0.00 0.00 0.00 2.24
722 723 8.373048 TGTGAAAACACTTCGATACAATAGTT 57.627 30.769 0.00 0.00 0.00 2.24
723 724 7.956420 TGTGAAAACACTTCGATACAATAGT 57.044 32.000 0.00 0.00 0.00 2.12
724 725 9.825972 ATTTGTGAAAACACTTCGATACAATAG 57.174 29.630 0.00 0.00 0.00 1.73
725 726 9.820229 GATTTGTGAAAACACTTCGATACAATA 57.180 29.630 0.00 0.00 0.00 1.90
726 727 8.349245 TGATTTGTGAAAACACTTCGATACAAT 58.651 29.630 0.00 0.00 0.00 2.71
727 728 7.698628 TGATTTGTGAAAACACTTCGATACAA 58.301 30.769 0.00 0.00 0.00 2.41
728 729 7.252965 TGATTTGTGAAAACACTTCGATACA 57.747 32.000 0.00 0.00 0.00 2.29
729 730 8.728088 ATTGATTTGTGAAAACACTTCGATAC 57.272 30.769 0.00 0.00 0.00 2.24
730 731 9.820229 GTATTGATTTGTGAAAACACTTCGATA 57.180 29.630 0.00 0.00 0.00 2.92
731 732 8.567948 AGTATTGATTTGTGAAAACACTTCGAT 58.432 29.630 0.00 0.00 0.00 3.59
732 733 7.925993 AGTATTGATTTGTGAAAACACTTCGA 58.074 30.769 0.00 0.00 0.00 3.71
733 734 7.323656 GGAGTATTGATTTGTGAAAACACTTCG 59.676 37.037 0.00 0.00 0.00 3.79
734 735 8.134895 TGGAGTATTGATTTGTGAAAACACTTC 58.865 33.333 0.00 0.00 0.00 3.01
735 736 8.006298 TGGAGTATTGATTTGTGAAAACACTT 57.994 30.769 0.00 0.00 0.00 3.16
736 737 7.581213 TGGAGTATTGATTTGTGAAAACACT 57.419 32.000 0.00 0.00 0.00 3.55
737 738 8.641499 TTTGGAGTATTGATTTGTGAAAACAC 57.359 30.769 0.00 0.00 0.00 3.32
738 739 7.437862 GCTTTGGAGTATTGATTTGTGAAAACA 59.562 33.333 0.00 0.00 0.00 2.83
739 740 7.437862 TGCTTTGGAGTATTGATTTGTGAAAAC 59.562 33.333 0.00 0.00 0.00 2.43
740 741 7.437862 GTGCTTTGGAGTATTGATTTGTGAAAA 59.562 33.333 0.00 0.00 0.00 2.29
741 742 6.922957 GTGCTTTGGAGTATTGATTTGTGAAA 59.077 34.615 0.00 0.00 0.00 2.69
742 743 6.040278 TGTGCTTTGGAGTATTGATTTGTGAA 59.960 34.615 0.00 0.00 0.00 3.18
743 744 5.534278 TGTGCTTTGGAGTATTGATTTGTGA 59.466 36.000 0.00 0.00 0.00 3.58
744 745 5.771469 TGTGCTTTGGAGTATTGATTTGTG 58.229 37.500 0.00 0.00 0.00 3.33
745 746 6.040842 AGTTGTGCTTTGGAGTATTGATTTGT 59.959 34.615 0.00 0.00 0.00 2.83
746 747 6.449698 AGTTGTGCTTTGGAGTATTGATTTG 58.550 36.000 0.00 0.00 0.00 2.32
747 748 6.655078 AGTTGTGCTTTGGAGTATTGATTT 57.345 33.333 0.00 0.00 0.00 2.17
748 749 6.942576 AGTAGTTGTGCTTTGGAGTATTGATT 59.057 34.615 0.00 0.00 0.00 2.57
749 750 6.476378 AGTAGTTGTGCTTTGGAGTATTGAT 58.524 36.000 0.00 0.00 0.00 2.57
750 751 5.865085 AGTAGTTGTGCTTTGGAGTATTGA 58.135 37.500 0.00 0.00 0.00 2.57
751 752 5.122396 GGAGTAGTTGTGCTTTGGAGTATTG 59.878 44.000 0.00 0.00 0.00 1.90
752 753 5.221843 TGGAGTAGTTGTGCTTTGGAGTATT 60.222 40.000 0.00 0.00 0.00 1.89
753 754 4.286032 TGGAGTAGTTGTGCTTTGGAGTAT 59.714 41.667 0.00 0.00 0.00 2.12
754 755 3.644265 TGGAGTAGTTGTGCTTTGGAGTA 59.356 43.478 0.00 0.00 0.00 2.59
755 756 2.438021 TGGAGTAGTTGTGCTTTGGAGT 59.562 45.455 0.00 0.00 0.00 3.85
756 757 3.070018 CTGGAGTAGTTGTGCTTTGGAG 58.930 50.000 0.00 0.00 0.00 3.86
757 758 2.810400 GCTGGAGTAGTTGTGCTTTGGA 60.810 50.000 0.00 0.00 0.00 3.53
758 759 1.537202 GCTGGAGTAGTTGTGCTTTGG 59.463 52.381 0.00 0.00 0.00 3.28
759 760 2.498167 AGCTGGAGTAGTTGTGCTTTG 58.502 47.619 0.00 0.00 0.00 2.77
760 761 2.938956 AGCTGGAGTAGTTGTGCTTT 57.061 45.000 0.00 0.00 0.00 3.51
761 762 5.878406 ATATAGCTGGAGTAGTTGTGCTT 57.122 39.130 0.00 0.00 32.72 3.91
762 763 6.307776 TCTATATAGCTGGAGTAGTTGTGCT 58.692 40.000 4.75 0.00 34.92 4.40
763 764 6.431543 TCTCTATATAGCTGGAGTAGTTGTGC 59.568 42.308 4.75 0.00 0.00 4.57
764 765 7.445707 TGTCTCTATATAGCTGGAGTAGTTGTG 59.554 40.741 4.75 0.00 0.00 3.33
765 766 7.519057 TGTCTCTATATAGCTGGAGTAGTTGT 58.481 38.462 4.75 0.00 0.00 3.32
766 767 7.987750 TGTCTCTATATAGCTGGAGTAGTTG 57.012 40.000 4.75 0.00 0.00 3.16
767 768 9.899661 CTATGTCTCTATATAGCTGGAGTAGTT 57.100 37.037 4.75 0.00 0.00 2.24
768 769 9.274354 TCTATGTCTCTATATAGCTGGAGTAGT 57.726 37.037 4.75 0.00 29.36 2.73
769 770 9.764363 CTCTATGTCTCTATATAGCTGGAGTAG 57.236 40.741 4.75 8.24 29.36 2.57
770 771 9.274354 ACTCTATGTCTCTATATAGCTGGAGTA 57.726 37.037 4.75 0.75 29.36 2.59
771 772 8.046708 CACTCTATGTCTCTATATAGCTGGAGT 58.953 40.741 4.75 8.15 29.36 3.85
772 773 7.012327 GCACTCTATGTCTCTATATAGCTGGAG 59.988 44.444 4.75 7.64 29.36 3.86
773 774 6.826231 GCACTCTATGTCTCTATATAGCTGGA 59.174 42.308 4.75 1.11 29.36 3.86
774 775 6.828273 AGCACTCTATGTCTCTATATAGCTGG 59.172 42.308 4.75 0.00 29.36 4.85
775 776 7.201723 CCAGCACTCTATGTCTCTATATAGCTG 60.202 44.444 4.75 0.00 29.36 4.24
776 777 6.828273 CCAGCACTCTATGTCTCTATATAGCT 59.172 42.308 4.75 0.00 29.36 3.32
777 778 6.459573 GCCAGCACTCTATGTCTCTATATAGC 60.460 46.154 4.75 0.00 29.36 2.97
778 779 6.828273 AGCCAGCACTCTATGTCTCTATATAG 59.172 42.308 3.10 3.10 0.00 1.31
779 780 6.726379 AGCCAGCACTCTATGTCTCTATATA 58.274 40.000 0.00 0.00 0.00 0.86
780 781 5.579047 AGCCAGCACTCTATGTCTCTATAT 58.421 41.667 0.00 0.00 0.00 0.86
781 782 4.991776 AGCCAGCACTCTATGTCTCTATA 58.008 43.478 0.00 0.00 0.00 1.31
782 783 3.843422 AGCCAGCACTCTATGTCTCTAT 58.157 45.455 0.00 0.00 0.00 1.98
783 784 3.304911 AGCCAGCACTCTATGTCTCTA 57.695 47.619 0.00 0.00 0.00 2.43
784 785 2.157640 AGCCAGCACTCTATGTCTCT 57.842 50.000 0.00 0.00 0.00 3.10
785 786 2.955660 ACTAGCCAGCACTCTATGTCTC 59.044 50.000 0.00 0.00 0.00 3.36
786 787 2.955660 GACTAGCCAGCACTCTATGTCT 59.044 50.000 0.00 0.00 0.00 3.41
787 788 2.035321 GGACTAGCCAGCACTCTATGTC 59.965 54.545 0.00 0.00 36.34 3.06
788 789 2.035632 GGACTAGCCAGCACTCTATGT 58.964 52.381 0.00 0.00 36.34 2.29
789 790 1.000827 CGGACTAGCCAGCACTCTATG 60.001 57.143 0.00 0.00 35.94 2.23
790 791 1.323412 CGGACTAGCCAGCACTCTAT 58.677 55.000 0.00 0.00 35.94 1.98
791 792 1.384989 GCGGACTAGCCAGCACTCTA 61.385 60.000 0.00 0.00 36.57 2.43
833 835 3.427638 CGGATGAAGTGTAGCGAAGAAGA 60.428 47.826 0.00 0.00 0.00 2.87
840 842 2.230940 CGGCGGATGAAGTGTAGCG 61.231 63.158 0.00 0.00 0.00 4.26
848 850 2.963548 TGTATGTAACGGCGGATGAA 57.036 45.000 13.24 0.00 0.00 2.57
850 852 3.127589 TGATTGTATGTAACGGCGGATG 58.872 45.455 13.24 0.00 0.00 3.51
851 853 3.462483 TGATTGTATGTAACGGCGGAT 57.538 42.857 13.24 1.55 0.00 4.18
852 854 2.963548 TGATTGTATGTAACGGCGGA 57.036 45.000 13.24 0.00 0.00 5.54
863 879 8.832735 TCCTCTAGTTAAGGGTTTTGATTGTAT 58.167 33.333 0.00 0.00 34.46 2.29
864 880 8.098912 GTCCTCTAGTTAAGGGTTTTGATTGTA 58.901 37.037 0.00 0.00 34.46 2.41
869 885 5.047519 CGAGTCCTCTAGTTAAGGGTTTTGA 60.048 44.000 0.00 0.00 34.46 2.69
899 915 1.688772 GGAATGATGCATGGACAGCT 58.311 50.000 2.46 0.00 0.00 4.24
915 931 0.406361 ACAAATACAAGGCCGGGGAA 59.594 50.000 2.18 0.00 0.00 3.97
933 949 0.178068 TCGATGCTTTGGCTCCCTAC 59.822 55.000 0.00 0.00 39.59 3.18
941 957 0.181114 TCCCCTCATCGATGCTTTGG 59.819 55.000 20.81 17.27 0.00 3.28
975 991 8.389586 TCGTTTTTCTTTCTTAGTTTCTTTGC 57.610 30.769 0.00 0.00 0.00 3.68
1030 1049 0.459237 CCTGCGAGCAGTACAAGGAG 60.459 60.000 21.73 2.34 42.15 3.69
1111 1130 0.832983 AAAAATCCTGGCCAGCAGCA 60.833 50.000 28.39 10.74 46.50 4.41
1112 1131 1.977685 AAAAATCCTGGCCAGCAGC 59.022 52.632 28.39 0.00 42.60 5.25
1231 1251 3.043713 CATGTGCCACGTGTCGCT 61.044 61.111 15.65 0.00 30.72 4.93
1305 1325 1.659098 GGCTCGTTGATTCCTGTTACG 59.341 52.381 0.00 0.00 0.00 3.18
1538 1596 1.544686 GTGCACTTTCGTTTGTGTGG 58.455 50.000 10.32 0.00 36.63 4.17
1548 1606 5.116882 AGATTAATAGGTCCGTGCACTTTC 58.883 41.667 16.19 4.45 0.00 2.62
1549 1607 5.099042 AGATTAATAGGTCCGTGCACTTT 57.901 39.130 16.19 0.00 0.00 2.66
1550 1608 4.755266 AGATTAATAGGTCCGTGCACTT 57.245 40.909 16.19 2.75 0.00 3.16
1561 1619 4.336889 TGCTCGGGTCAAGATTAATAGG 57.663 45.455 0.00 0.00 0.00 2.57
1650 1709 4.508128 AGGCGGCATGTACGTCCG 62.508 66.667 13.08 16.78 45.46 4.79
1939 2013 5.163713 GCCGAACAGAATTGCTAGAAAAGAT 60.164 40.000 0.00 0.00 0.00 2.40
1977 2052 0.825425 TGGCCAGCGAATTTTGGTCA 60.825 50.000 0.00 7.53 46.21 4.02
1981 2056 1.446618 GCCTGGCCAGCGAATTTTG 60.447 57.895 28.39 12.08 0.00 2.44
2070 2145 7.608153 TGAAACTGGATGATTAGTAAGTCGAA 58.392 34.615 0.00 0.00 0.00 3.71
2073 2148 7.517417 CGCATGAAACTGGATGATTAGTAAGTC 60.517 40.741 0.00 0.00 0.00 3.01
2085 2160 1.805254 GCAGCGCATGAAACTGGAT 59.195 52.632 11.47 0.00 31.94 3.41
2095 2170 0.243365 TTTTCCAATTCGCAGCGCAT 59.757 45.000 10.87 0.56 0.00 4.73
2125 2251 4.081752 ACCAAACAAACAAGATGAGTGCAA 60.082 37.500 0.00 0.00 0.00 4.08
2154 2280 9.621239 TTTCCTCACCTTCTCCTGATATATTAT 57.379 33.333 0.00 0.00 0.00 1.28
2155 2281 9.447279 TTTTCCTCACCTTCTCCTGATATATTA 57.553 33.333 0.00 0.00 0.00 0.98
2156 2282 7.937700 TTTCCTCACCTTCTCCTGATATATT 57.062 36.000 0.00 0.00 0.00 1.28
2214 2340 1.152963 ATAACCGGCACCCTCATGC 60.153 57.895 0.00 0.00 45.34 4.06
2260 2393 3.204827 CACGCCCTACTGCATGGC 61.205 66.667 6.62 6.62 41.85 4.40
2261 2394 3.204827 GCACGCCCTACTGCATGG 61.205 66.667 0.00 0.00 33.31 3.66
2262 2395 2.436469 TGCACGCCCTACTGCATG 60.436 61.111 0.00 0.00 38.49 4.06
2284 2417 0.604243 AAAATCACGCCCGTACTGCA 60.604 50.000 5.29 0.00 0.00 4.41
2287 2420 1.274167 TCTCAAAATCACGCCCGTACT 59.726 47.619 0.00 0.00 0.00 2.73
2289 2422 2.028839 TCTTCTCAAAATCACGCCCGTA 60.029 45.455 0.00 0.00 0.00 4.02
2291 2424 1.438651 TCTTCTCAAAATCACGCCCG 58.561 50.000 0.00 0.00 0.00 6.13
2292 2425 5.560966 TTATTCTTCTCAAAATCACGCCC 57.439 39.130 0.00 0.00 0.00 6.13
2293 2426 6.612306 ACTTTATTCTTCTCAAAATCACGCC 58.388 36.000 0.00 0.00 0.00 5.68
2294 2427 8.443937 ACTACTTTATTCTTCTCAAAATCACGC 58.556 33.333 0.00 0.00 0.00 5.34
2331 2490 3.614616 CAGCACACGAGTTATTCTTCTCC 59.385 47.826 0.00 0.00 0.00 3.71
2343 2502 1.431488 AACACAGCACAGCACACGAG 61.431 55.000 0.00 0.00 0.00 4.18
2376 2551 6.763610 CCATCACTTAGATCTTACAACTTCCC 59.236 42.308 0.00 0.00 33.72 3.97
2478 4856 0.586802 GAACGGACCACTTGCAGTTC 59.413 55.000 0.00 0.00 0.00 3.01
2528 4906 9.971922 CTGACAAAGAATTAAGAAGGACAAAAT 57.028 29.630 0.00 0.00 0.00 1.82
2543 4921 2.354203 GGCTCCGACTCTGACAAAGAAT 60.354 50.000 0.00 0.00 33.37 2.40
2564 4942 4.368808 CTGCGACCAAACGGTGCG 62.369 66.667 0.00 0.00 36.70 5.34
2578 4956 1.203052 TGCTAAAATTCAGCCAGCTGC 59.797 47.619 14.86 3.91 43.31 5.25
2588 4966 8.583765 GTTGTATGAAAATCCGTGCTAAAATTC 58.416 33.333 0.00 0.00 0.00 2.17
2597 4975 4.006989 TGGGAGTTGTATGAAAATCCGTG 58.993 43.478 3.52 0.00 43.63 4.94
2598 4976 4.295141 TGGGAGTTGTATGAAAATCCGT 57.705 40.909 3.52 0.00 43.63 4.69
2599 4977 5.450412 CCATTGGGAGTTGTATGAAAATCCG 60.450 44.000 0.00 0.00 43.63 4.18
2608 4986 2.208872 AGAGGCCATTGGGAGTTGTAT 58.791 47.619 5.01 0.00 35.59 2.29
2616 4994 1.338200 GCGACTATAGAGGCCATTGGG 60.338 57.143 5.01 0.00 37.18 4.12
2635 5013 2.101582 ACACTCCAATCTCGATGTAGGC 59.898 50.000 0.00 0.00 0.00 3.93
2642 5020 2.688507 GAGCAAACACTCCAATCTCGA 58.311 47.619 0.00 0.00 0.00 4.04
2672 5050 3.562182 TCTAGAGGTGTCATCGCCATTA 58.438 45.455 0.00 0.00 45.81 1.90
2716 5094 2.805671 CCAAGATAACACGCAGACACAA 59.194 45.455 0.00 0.00 0.00 3.33
2717 5095 2.412870 CCAAGATAACACGCAGACACA 58.587 47.619 0.00 0.00 0.00 3.72
2725 5103 1.429148 GGGCTCGCCAAGATAACACG 61.429 60.000 10.51 0.00 37.98 4.49
2729 5107 0.691078 AGAGGGGCTCGCCAAGATAA 60.691 55.000 10.51 0.00 37.98 1.75
2731 5109 1.997874 AAGAGGGGCTCGCCAAGAT 60.998 57.895 10.51 0.00 37.98 2.40
2750 5128 0.904394 ACCCAATGCACACCATTCCC 60.904 55.000 0.00 0.00 42.15 3.97
2754 5132 3.025978 CAAGATACCCAATGCACACCAT 58.974 45.455 0.00 0.00 35.06 3.55
2758 5136 2.819019 CACACAAGATACCCAATGCACA 59.181 45.455 0.00 0.00 0.00 4.57
2762 5140 2.164219 GGCACACACAAGATACCCAATG 59.836 50.000 0.00 0.00 0.00 2.82
2763 5141 2.446435 GGCACACACAAGATACCCAAT 58.554 47.619 0.00 0.00 0.00 3.16
2767 5145 1.463444 GAACGGCACACACAAGATACC 59.537 52.381 0.00 0.00 0.00 2.73
2781 5159 0.802494 CACCATAACCACTGAACGGC 59.198 55.000 0.00 0.00 0.00 5.68
2785 5163 4.339814 GTGAAAACCACCATAACCACTGAA 59.660 41.667 0.00 0.00 39.86 3.02
2868 5250 7.225538 GGATTTCTGCATTCGATAAGAAGAAGA 59.774 37.037 0.00 0.00 42.92 2.87
2879 5261 1.066502 TGTCGGGATTTCTGCATTCGA 60.067 47.619 0.00 0.00 0.00 3.71
2976 5358 1.508256 AGGTCAATAGGTACTGGGCC 58.492 55.000 0.00 0.00 41.52 5.80



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.