Multiple sequence alignment - TraesCS4A01G351900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G351900 chr4A 100.000 6352 0 0 1 6352 627521725 627515374 0.000000e+00 11731.0
1 TraesCS4A01G351900 chr4A 100.000 28 0 0 3628 3655 742155683 742155710 1.200000e-02 52.8
2 TraesCS4A01G351900 chr5D 94.733 3968 145 20 1975 5898 541608181 541612128 0.000000e+00 6111.0
3 TraesCS4A01G351900 chr5D 87.458 598 27 19 767 1330 541607359 541607942 0.000000e+00 645.0
4 TraesCS4A01G351900 chr5D 86.293 321 16 7 5918 6218 541612264 541612576 2.210000e-84 324.0
5 TraesCS4A01G351900 chr5D 100.000 151 0 0 618 768 276929083 276928933 4.850000e-71 279.0
6 TraesCS4A01G351900 chr5D 81.910 199 15 8 396 576 541607153 541607348 1.430000e-31 148.0
7 TraesCS4A01G351900 chr5D 93.750 48 2 1 252 298 541606933 541606980 3.180000e-08 71.3
8 TraesCS4A01G351900 chr5D 93.617 47 2 1 254 299 541598312 541598358 1.140000e-07 69.4
9 TraesCS4A01G351900 chr5B 93.194 3291 163 33 2129 5398 683516916 683520166 0.000000e+00 4780.0
10 TraesCS4A01G351900 chr5B 84.626 1405 89 55 767 2100 683515313 683516661 0.000000e+00 1280.0
11 TraesCS4A01G351900 chr5B 86.344 454 27 12 5918 6352 683520767 683521204 4.490000e-126 462.0
12 TraesCS4A01G351900 chr5B 89.170 277 16 7 5417 5683 683520220 683520492 3.670000e-87 333.0
13 TraesCS4A01G351900 chr5B 85.648 216 17 12 376 587 683515109 683515314 1.390000e-51 215.0
14 TraesCS4A01G351900 chr6B 86.006 1079 104 17 3668 4727 197772588 197771538 0.000000e+00 1112.0
15 TraesCS4A01G351900 chr7B 98.193 166 1 2 614 778 36653104 36653268 8.060000e-74 289.0
16 TraesCS4A01G351900 chr2B 100.000 151 0 0 618 768 551537873 551538023 4.850000e-71 279.0
17 TraesCS4A01G351900 chr2B 99.351 154 1 0 619 772 765462623 765462470 4.850000e-71 279.0
18 TraesCS4A01G351900 chr2B 92.973 185 10 3 70 252 184781753 184781936 3.780000e-67 267.0
19 TraesCS4A01G351900 chr2B 92.935 184 10 3 81 262 377538826 377539008 1.360000e-66 265.0
20 TraesCS4A01G351900 chrUn 93.923 181 9 2 80 258 324951180 324951000 8.110000e-69 272.0
21 TraesCS4A01G351900 chrUn 93.370 181 10 2 80 258 369819796 369819616 3.780000e-67 267.0
22 TraesCS4A01G351900 chr3B 93.923 181 9 2 80 258 815524853 815524673 8.110000e-69 272.0
23 TraesCS4A01G351900 chr3B 93.923 181 9 2 80 258 815527014 815526834 8.110000e-69 272.0
24 TraesCS4A01G351900 chr3B 93.923 181 9 2 80 258 815656830 815656650 8.110000e-69 272.0
25 TraesCS4A01G351900 chr3B 93.370 181 10 2 80 258 815560766 815560586 3.780000e-67 267.0
26 TraesCS4A01G351900 chr1B 94.828 174 9 0 79 252 622913999 622913826 8.110000e-69 272.0
27 TraesCS4A01G351900 chr5A 92.157 153 12 0 616 768 654424836 654424988 3.860000e-52 217.0
28 TraesCS4A01G351900 chr7A 92.793 111 8 0 626 736 19699171 19699061 1.830000e-35 161.0
29 TraesCS4A01G351900 chr4B 87.209 86 6 4 684 766 546139688 546139605 6.780000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G351900 chr4A 627515374 627521725 6351 True 11731.00 11731 100.0000 1 6352 1 chr4A.!!$R1 6351
1 TraesCS4A01G351900 chr5D 541606933 541612576 5643 False 1459.86 6111 88.8288 252 6218 5 chr5D.!!$F2 5966
2 TraesCS4A01G351900 chr5B 683515109 683521204 6095 False 1414.00 4780 87.7964 376 6352 5 chr5B.!!$F1 5976
3 TraesCS4A01G351900 chr6B 197771538 197772588 1050 True 1112.00 1112 86.0060 3668 4727 1 chr6B.!!$R1 1059
4 TraesCS4A01G351900 chr3B 815524673 815527014 2341 True 272.00 272 93.9230 80 258 2 chr3B.!!$R3 178

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.037697 TTTACCTGTGCGATGCGAGT 60.038 50.000 0.00 0.00 0.00 4.18 F
64 65 0.112412 TTGGCCAAAAGGAGAGGGTC 59.888 55.000 17.98 0.00 0.00 4.46 F
749 849 0.179184 GAGGTCGTGCGAGAAGAGTC 60.179 60.000 0.00 0.00 0.00 3.36 F
1956 2165 0.040958 GTTGCTCAACTTCAGCGTGG 60.041 55.000 5.56 0.00 40.01 4.94 F
2701 3158 0.178301 TGTACTGTGTGTTGCCGGAA 59.822 50.000 5.05 0.00 0.00 4.30 F
2787 3244 0.181350 GAAGGGGATGGCGATCTGTT 59.819 55.000 8.71 0.16 0.00 3.16 F
2832 3289 0.251474 AATTCAGGCAGGAGCAGCAA 60.251 50.000 0.00 0.00 44.61 3.91 F
3678 4138 0.382515 GCCACGTTTACAAGGCACAA 59.617 50.000 7.41 0.00 46.26 3.33 F
3930 4394 0.413434 CCCATCCCCAACCCTCTTTT 59.587 55.000 0.00 0.00 0.00 2.27 F
3931 4395 1.203300 CCCATCCCCAACCCTCTTTTT 60.203 52.381 0.00 0.00 0.00 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1707 1898 0.105593 ACGCTGGATGGATGCTACTG 59.894 55.000 0.00 0.0 0.00 2.74 R
1708 1899 0.105593 CACGCTGGATGGATGCTACT 59.894 55.000 0.00 0.0 0.00 2.57 R
2368 2810 0.250858 CATCACCACAGCCAGGAACA 60.251 55.000 0.00 0.0 0.00 3.18 R
2854 3311 0.032813 CCCCATCATCTTTGTGGCCT 60.033 55.000 3.32 0.0 0.00 5.19 R
3911 4375 0.413434 AAAAGAGGGTTGGGGATGGG 59.587 55.000 0.00 0.0 0.00 4.00 R
4038 4503 1.246649 GTGACACCACCATGATGCAA 58.753 50.000 0.00 0.0 37.33 4.08 R
4818 5609 3.961849 AGGAAAAGGGAAAGCAGATCTC 58.038 45.455 0.00 0.0 0.00 2.75 R
4941 5875 0.039617 GCGTCATCCTCTCCATCTCG 60.040 60.000 0.00 0.0 0.00 4.04 R
5009 5943 0.174845 ATGCGTTCTTACTAGCGGCA 59.825 50.000 1.45 0.0 0.00 5.69 R
5515 6573 0.388659 GCATCAGACATCTCTCGCCT 59.611 55.000 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.514003 TTTTTACCTGTGCGATGCGA 58.486 45.000 0.00 0.00 0.00 5.10
33 34 1.075542 TTTTACCTGTGCGATGCGAG 58.924 50.000 0.00 0.00 0.00 5.03
34 35 0.037697 TTTACCTGTGCGATGCGAGT 60.038 50.000 0.00 0.00 0.00 4.18
35 36 0.812549 TTACCTGTGCGATGCGAGTA 59.187 50.000 0.00 0.00 0.00 2.59
36 37 0.812549 TACCTGTGCGATGCGAGTAA 59.187 50.000 0.00 0.00 0.00 2.24
37 38 0.037697 ACCTGTGCGATGCGAGTAAA 60.038 50.000 0.00 0.00 0.00 2.01
38 39 1.075542 CCTGTGCGATGCGAGTAAAA 58.924 50.000 0.00 0.00 0.00 1.52
39 40 1.463056 CCTGTGCGATGCGAGTAAAAA 59.537 47.619 0.00 0.00 0.00 1.94
54 55 3.863407 AAAAAGCGGTTGGCCAAAA 57.137 42.105 22.47 0.00 45.17 2.44
55 56 1.662517 AAAAAGCGGTTGGCCAAAAG 58.337 45.000 22.47 18.02 45.17 2.27
56 57 0.179059 AAAAGCGGTTGGCCAAAAGG 60.179 50.000 22.47 13.40 45.17 3.11
57 58 1.045911 AAAGCGGTTGGCCAAAAGGA 61.046 50.000 22.47 0.00 45.17 3.36
58 59 1.463553 AAGCGGTTGGCCAAAAGGAG 61.464 55.000 22.47 10.89 45.17 3.69
59 60 1.901464 GCGGTTGGCCAAAAGGAGA 60.901 57.895 22.47 0.00 34.80 3.71
60 61 1.866853 GCGGTTGGCCAAAAGGAGAG 61.867 60.000 22.47 7.64 34.80 3.20
61 62 1.244019 CGGTTGGCCAAAAGGAGAGG 61.244 60.000 22.47 0.00 34.09 3.69
62 63 0.900182 GGTTGGCCAAAAGGAGAGGG 60.900 60.000 22.47 0.00 34.09 4.30
63 64 0.178961 GTTGGCCAAAAGGAGAGGGT 60.179 55.000 22.47 0.00 0.00 4.34
64 65 0.112412 TTGGCCAAAAGGAGAGGGTC 59.888 55.000 17.98 0.00 0.00 4.46
72 73 2.990479 GGAGAGGGTCCGCACATT 59.010 61.111 0.00 0.00 34.84 2.71
73 74 1.299976 GGAGAGGGTCCGCACATTT 59.700 57.895 0.00 0.00 34.84 2.32
74 75 0.539986 GGAGAGGGTCCGCACATTTA 59.460 55.000 0.00 0.00 34.84 1.40
75 76 1.653151 GAGAGGGTCCGCACATTTAC 58.347 55.000 0.00 0.00 0.00 2.01
76 77 0.252197 AGAGGGTCCGCACATTTACC 59.748 55.000 0.00 0.00 0.00 2.85
77 78 0.252197 GAGGGTCCGCACATTTACCT 59.748 55.000 0.00 0.00 32.38 3.08
78 79 0.696501 AGGGTCCGCACATTTACCTT 59.303 50.000 0.00 0.00 32.38 3.50
149 150 6.905736 TCACCTTTTATAGCCATTGGATGTA 58.094 36.000 6.95 0.00 0.00 2.29
150 151 7.526041 TCACCTTTTATAGCCATTGGATGTAT 58.474 34.615 6.95 2.67 0.00 2.29
160 161 7.838079 AGCCATTGGATGTATTGCTATAAAA 57.162 32.000 6.95 0.00 0.00 1.52
171 172 4.757799 TTGCTATAAAATGCGTGTGTGT 57.242 36.364 0.00 0.00 0.00 3.72
188 189 3.190535 GTGTGTTGATGTGGGTTGTATCC 59.809 47.826 0.00 0.00 0.00 2.59
293 295 5.240623 AGTGTGAATAAAAATCAGTCGGCAA 59.759 36.000 0.00 0.00 0.00 4.52
298 300 7.381139 GTGAATAAAAATCAGTCGGCAAAAAGA 59.619 33.333 0.00 0.00 0.00 2.52
299 301 7.381139 TGAATAAAAATCAGTCGGCAAAAAGAC 59.619 33.333 0.00 0.00 37.63 3.01
317 339 7.979444 AAAAGACTATCCAAGAAAATCGACA 57.021 32.000 0.00 0.00 0.00 4.35
320 342 7.778470 AGACTATCCAAGAAAATCGACATTC 57.222 36.000 4.29 4.29 0.00 2.67
321 343 7.560368 AGACTATCCAAGAAAATCGACATTCT 58.440 34.615 8.36 8.36 37.49 2.40
322 344 7.493971 AGACTATCCAAGAAAATCGACATTCTG 59.506 37.037 13.55 8.85 36.09 3.02
324 346 4.651778 TCCAAGAAAATCGACATTCTGGT 58.348 39.130 13.55 0.00 36.09 4.00
325 347 4.695455 TCCAAGAAAATCGACATTCTGGTC 59.305 41.667 13.55 0.00 36.09 4.02
327 349 3.610911 AGAAAATCGACATTCTGGTCCC 58.389 45.455 12.38 0.00 34.70 4.46
328 350 3.264450 AGAAAATCGACATTCTGGTCCCT 59.736 43.478 12.38 0.00 34.70 4.20
332 354 3.887621 TCGACATTCTGGTCCCTAAAG 57.112 47.619 0.00 0.00 34.24 1.85
335 357 4.285003 TCGACATTCTGGTCCCTAAAGAAA 59.715 41.667 0.00 0.00 33.86 2.52
336 358 4.631813 CGACATTCTGGTCCCTAAAGAAAG 59.368 45.833 0.00 0.00 33.86 2.62
337 359 5.568825 CGACATTCTGGTCCCTAAAGAAAGA 60.569 44.000 0.39 0.00 33.86 2.52
343 395 8.807948 TTCTGGTCCCTAAAGAAAGATTTATG 57.192 34.615 0.00 0.00 0.00 1.90
345 397 7.829211 TCTGGTCCCTAAAGAAAGATTTATGTG 59.171 37.037 0.00 0.00 0.00 3.21
350 402 6.238484 CCCTAAAGAAAGATTTATGTGCCTCG 60.238 42.308 0.00 0.00 0.00 4.63
366 418 0.868406 CTCGAAAGAAAAGCGGCACT 59.132 50.000 1.45 0.00 41.32 4.40
368 420 1.002900 TCGAAAGAAAAGCGGCACTTG 60.003 47.619 1.45 0.00 35.11 3.16
369 421 1.002900 CGAAAGAAAAGCGGCACTTGA 60.003 47.619 1.45 0.00 39.09 3.02
417 494 5.300792 TGAAGGAAAAATGGGTATATTCGGC 59.699 40.000 0.00 0.00 0.00 5.54
424 501 6.783708 AAATGGGTATATTCGGCAAGAAAA 57.216 33.333 0.00 0.00 42.91 2.29
495 583 0.840722 GGGGTGGGAGAGAGAAACCA 60.841 60.000 0.00 0.00 32.28 3.67
499 587 2.372172 GGTGGGAGAGAGAAACCAGAAA 59.628 50.000 0.00 0.00 32.84 2.52
500 588 3.558109 GGTGGGAGAGAGAAACCAGAAAG 60.558 52.174 0.00 0.00 32.84 2.62
503 591 3.333804 GGAGAGAGAAACCAGAAAGCAG 58.666 50.000 0.00 0.00 0.00 4.24
504 592 3.007398 GGAGAGAGAAACCAGAAAGCAGA 59.993 47.826 0.00 0.00 0.00 4.26
505 593 4.244862 GAGAGAGAAACCAGAAAGCAGAG 58.755 47.826 0.00 0.00 0.00 3.35
506 594 2.741517 GAGAGAAACCAGAAAGCAGAGC 59.258 50.000 0.00 0.00 0.00 4.09
509 597 0.185901 AAACCAGAAAGCAGAGCCCA 59.814 50.000 0.00 0.00 0.00 5.36
511 599 0.185901 ACCAGAAAGCAGAGCCCAAA 59.814 50.000 0.00 0.00 0.00 3.28
513 601 0.600057 CAGAAAGCAGAGCCCAAACC 59.400 55.000 0.00 0.00 0.00 3.27
514 602 0.185901 AGAAAGCAGAGCCCAAACCA 59.814 50.000 0.00 0.00 0.00 3.67
515 603 1.039856 GAAAGCAGAGCCCAAACCAA 58.960 50.000 0.00 0.00 0.00 3.67
516 604 1.412343 GAAAGCAGAGCCCAAACCAAA 59.588 47.619 0.00 0.00 0.00 3.28
520 608 1.118838 CAGAGCCCAAACCAAACCAA 58.881 50.000 0.00 0.00 0.00 3.67
618 718 1.490490 GGAGGAGAGAGAGAGAGAGCA 59.510 57.143 0.00 0.00 0.00 4.26
621 721 0.940126 GAGAGAGAGAGAGAGCAGCG 59.060 60.000 0.00 0.00 0.00 5.18
622 722 1.097547 AGAGAGAGAGAGAGCAGCGC 61.098 60.000 0.00 0.00 0.00 5.92
623 723 1.077501 AGAGAGAGAGAGCAGCGCT 60.078 57.895 2.64 2.64 43.88 5.92
635 735 1.920051 CAGCGCTGCTATACACACG 59.080 57.895 26.68 0.00 36.40 4.49
636 736 0.525455 CAGCGCTGCTATACACACGA 60.525 55.000 26.68 0.00 36.40 4.35
637 737 0.525668 AGCGCTGCTATACACACGAC 60.526 55.000 10.39 0.00 36.99 4.34
638 738 1.798368 GCGCTGCTATACACACGACG 61.798 60.000 0.00 0.00 0.00 5.12
639 739 0.247934 CGCTGCTATACACACGACGA 60.248 55.000 0.00 0.00 0.00 4.20
640 740 1.792632 CGCTGCTATACACACGACGAA 60.793 52.381 0.00 0.00 0.00 3.85
641 741 2.460918 GCTGCTATACACACGACGAAT 58.539 47.619 0.00 0.00 0.00 3.34
642 742 2.216488 GCTGCTATACACACGACGAATG 59.784 50.000 0.00 1.30 0.00 2.67
643 743 2.190161 TGCTATACACACGACGAATGC 58.810 47.619 0.00 0.00 0.00 3.56
644 744 1.187271 GCTATACACACGACGAATGCG 59.813 52.381 0.00 0.00 44.79 4.73
645 745 1.187271 CTATACACACGACGAATGCGC 59.813 52.381 0.00 0.00 42.48 6.09
646 746 1.739093 ATACACACGACGAATGCGCG 61.739 55.000 0.00 0.00 42.48 6.86
647 747 4.483683 CACACGACGAATGCGCGG 62.484 66.667 8.83 0.00 42.48 6.46
665 765 3.640000 CCGATGCCCGCACGATTC 61.640 66.667 11.47 0.00 36.84 2.52
666 766 3.988385 CGATGCCCGCACGATTCG 61.988 66.667 4.14 4.14 0.00 3.34
667 767 2.890474 GATGCCCGCACGATTCGT 60.890 61.111 5.75 5.75 42.36 3.85
668 768 1.590525 GATGCCCGCACGATTCGTA 60.591 57.895 11.99 0.00 38.32 3.43
669 769 1.818221 GATGCCCGCACGATTCGTAC 61.818 60.000 11.99 5.28 38.32 3.67
670 770 3.613702 GCCCGCACGATTCGTACG 61.614 66.667 21.68 21.68 44.69 3.67
671 771 2.202518 CCCGCACGATTCGTACGT 60.203 61.111 25.13 0.00 43.78 3.57
676 776 4.470876 ACGATTCGTACGTGGCAG 57.529 55.556 16.05 7.02 42.37 4.85
677 777 1.804326 ACGATTCGTACGTGGCAGC 60.804 57.895 16.05 0.16 42.37 5.25
678 778 2.845739 CGATTCGTACGTGGCAGCG 61.846 63.158 16.05 8.75 37.94 5.18
679 779 3.139118 GATTCGTACGTGGCAGCGC 62.139 63.158 16.05 0.00 34.88 5.92
680 780 3.925362 ATTCGTACGTGGCAGCGCA 62.925 57.895 16.05 0.00 34.88 6.09
681 781 4.649310 TCGTACGTGGCAGCGCAA 62.649 61.111 16.05 0.00 34.88 4.85
682 782 4.134187 CGTACGTGGCAGCGCAAG 62.134 66.667 11.47 2.01 43.44 4.01
704 804 1.801332 CAAGAGTGCATGCAGGAGC 59.199 57.895 23.41 9.52 42.57 4.70
705 805 1.744368 AAGAGTGCATGCAGGAGCG 60.744 57.895 23.41 0.00 46.23 5.03
706 806 3.873883 GAGTGCATGCAGGAGCGC 61.874 66.667 23.41 8.26 46.23 5.92
708 808 4.175489 GTGCATGCAGGAGCGCAG 62.175 66.667 23.41 0.00 46.99 5.18
709 809 4.710167 TGCATGCAGGAGCGCAGT 62.710 61.111 18.46 0.00 46.99 4.40
710 810 3.437795 GCATGCAGGAGCGCAGTT 61.438 61.111 14.21 0.00 46.99 3.16
711 811 2.483745 CATGCAGGAGCGCAGTTG 59.516 61.111 11.47 5.33 46.99 3.16
712 812 2.749044 ATGCAGGAGCGCAGTTGG 60.749 61.111 11.47 0.00 46.99 3.77
715 815 4.020617 CAGGAGCGCAGTTGGGGA 62.021 66.667 11.47 0.00 0.00 4.81
716 816 3.710722 AGGAGCGCAGTTGGGGAG 61.711 66.667 11.47 0.00 0.00 4.30
717 817 4.785453 GGAGCGCAGTTGGGGAGG 62.785 72.222 11.47 0.00 0.00 4.30
722 822 4.666253 GCAGTTGGGGAGGCAGCA 62.666 66.667 0.00 0.00 0.00 4.41
723 823 2.357836 CAGTTGGGGAGGCAGCAT 59.642 61.111 0.00 0.00 0.00 3.79
724 824 1.751927 CAGTTGGGGAGGCAGCATC 60.752 63.158 0.00 0.00 0.00 3.91
725 825 2.825836 GTTGGGGAGGCAGCATCG 60.826 66.667 0.00 0.00 0.00 3.84
726 826 3.329889 TTGGGGAGGCAGCATCGT 61.330 61.111 0.00 0.00 0.00 3.73
727 827 2.905996 TTGGGGAGGCAGCATCGTT 61.906 57.895 0.00 0.00 0.00 3.85
728 828 2.514824 GGGGAGGCAGCATCGTTC 60.515 66.667 0.00 0.00 0.00 3.95
729 829 2.892425 GGGAGGCAGCATCGTTCG 60.892 66.667 0.00 0.00 0.00 3.95
730 830 2.892425 GGAGGCAGCATCGTTCGG 60.892 66.667 0.00 0.00 0.00 4.30
731 831 2.184322 GAGGCAGCATCGTTCGGA 59.816 61.111 0.00 0.00 0.00 4.55
732 832 1.880340 GAGGCAGCATCGTTCGGAG 60.880 63.158 0.00 0.00 0.00 4.63
733 833 2.892425 GGCAGCATCGTTCGGAGG 60.892 66.667 0.00 0.00 0.00 4.30
734 834 2.125512 GCAGCATCGTTCGGAGGT 60.126 61.111 0.00 0.00 0.00 3.85
735 835 2.167861 GCAGCATCGTTCGGAGGTC 61.168 63.158 0.00 0.00 0.00 3.85
736 836 1.874019 CAGCATCGTTCGGAGGTCG 60.874 63.158 0.00 0.00 40.90 4.79
737 837 2.181021 GCATCGTTCGGAGGTCGT 59.819 61.111 0.00 0.00 40.32 4.34
738 838 2.158959 GCATCGTTCGGAGGTCGTG 61.159 63.158 0.00 0.00 40.32 4.35
739 839 2.158959 CATCGTTCGGAGGTCGTGC 61.159 63.158 0.00 0.00 40.32 5.34
740 840 3.678717 ATCGTTCGGAGGTCGTGCG 62.679 63.158 0.00 0.00 42.36 5.34
744 844 2.670592 TCGGAGGTCGTGCGAGAA 60.671 61.111 4.96 0.00 45.12 2.87
745 845 2.202492 CGGAGGTCGTGCGAGAAG 60.202 66.667 0.00 0.00 44.08 2.85
746 846 2.687805 CGGAGGTCGTGCGAGAAGA 61.688 63.158 0.00 0.00 44.08 2.87
747 847 1.137825 GGAGGTCGTGCGAGAAGAG 59.862 63.158 0.00 0.00 0.00 2.85
748 848 1.587933 GGAGGTCGTGCGAGAAGAGT 61.588 60.000 0.00 0.00 0.00 3.24
749 849 0.179184 GAGGTCGTGCGAGAAGAGTC 60.179 60.000 0.00 0.00 0.00 3.36
750 850 1.512310 GGTCGTGCGAGAAGAGTCG 60.512 63.158 0.00 0.00 43.08 4.18
751 851 1.207085 GTCGTGCGAGAAGAGTCGT 59.793 57.895 0.00 0.00 42.17 4.34
752 852 0.790124 GTCGTGCGAGAAGAGTCGTC 60.790 60.000 0.00 0.00 42.17 4.20
753 853 0.949588 TCGTGCGAGAAGAGTCGTCT 60.950 55.000 8.43 8.43 42.17 4.18
754 854 0.791238 CGTGCGAGAAGAGTCGTCTG 60.791 60.000 13.64 7.14 42.17 3.51
755 855 0.238817 GTGCGAGAAGAGTCGTCTGT 59.761 55.000 13.64 0.00 42.17 3.41
756 856 0.238553 TGCGAGAAGAGTCGTCTGTG 59.761 55.000 13.64 6.90 42.17 3.66
757 857 0.517755 GCGAGAAGAGTCGTCTGTGA 59.482 55.000 13.64 0.00 42.17 3.58
758 858 1.069159 GCGAGAAGAGTCGTCTGTGAA 60.069 52.381 13.64 0.00 42.17 3.18
759 859 2.845486 CGAGAAGAGTCGTCTGTGAAG 58.155 52.381 13.64 0.00 35.14 3.02
760 860 2.591133 GAGAAGAGTCGTCTGTGAAGC 58.409 52.381 13.64 0.00 31.37 3.86
761 861 1.957177 AGAAGAGTCGTCTGTGAAGCA 59.043 47.619 7.86 0.00 31.37 3.91
762 862 2.030363 AGAAGAGTCGTCTGTGAAGCAG 60.030 50.000 7.86 0.00 46.34 4.24
763 863 1.323412 AGAGTCGTCTGTGAAGCAGT 58.677 50.000 0.00 0.00 45.23 4.40
764 864 1.683917 AGAGTCGTCTGTGAAGCAGTT 59.316 47.619 0.00 0.00 45.23 3.16
765 865 2.101582 AGAGTCGTCTGTGAAGCAGTTT 59.898 45.455 0.00 0.00 45.23 2.66
766 866 2.473235 GAGTCGTCTGTGAAGCAGTTTC 59.527 50.000 0.00 0.00 45.23 2.78
767 867 1.190323 GTCGTCTGTGAAGCAGTTTCG 59.810 52.381 0.00 0.00 45.23 3.46
768 868 0.508641 CGTCTGTGAAGCAGTTTCGG 59.491 55.000 0.00 0.00 45.23 4.30
769 869 1.865865 GTCTGTGAAGCAGTTTCGGA 58.134 50.000 0.00 0.00 45.23 4.55
770 870 1.795286 GTCTGTGAAGCAGTTTCGGAG 59.205 52.381 0.00 0.00 45.23 4.63
771 871 1.686587 TCTGTGAAGCAGTTTCGGAGA 59.313 47.619 0.00 0.00 45.23 3.71
772 872 2.064762 CTGTGAAGCAGTTTCGGAGAG 58.935 52.381 0.00 0.00 40.27 3.20
773 873 1.686587 TGTGAAGCAGTTTCGGAGAGA 59.313 47.619 0.00 0.00 38.71 3.10
774 874 2.288457 TGTGAAGCAGTTTCGGAGAGAG 60.288 50.000 0.00 0.00 38.71 3.20
775 875 2.029828 GTGAAGCAGTTTCGGAGAGAGA 60.030 50.000 0.00 0.00 38.71 3.10
776 876 2.230025 TGAAGCAGTTTCGGAGAGAGAG 59.770 50.000 0.00 0.00 38.71 3.20
777 877 2.208132 AGCAGTTTCGGAGAGAGAGA 57.792 50.000 0.00 0.00 38.43 3.10
778 878 2.091541 AGCAGTTTCGGAGAGAGAGAG 58.908 52.381 0.00 0.00 38.43 3.20
779 879 2.088423 GCAGTTTCGGAGAGAGAGAGA 58.912 52.381 0.00 0.00 38.43 3.10
780 880 2.097466 GCAGTTTCGGAGAGAGAGAGAG 59.903 54.545 0.00 0.00 38.43 3.20
781 881 3.605634 CAGTTTCGGAGAGAGAGAGAGA 58.394 50.000 0.00 0.00 38.43 3.10
782 882 3.374058 CAGTTTCGGAGAGAGAGAGAGAC 59.626 52.174 0.00 0.00 38.43 3.36
783 883 3.008594 AGTTTCGGAGAGAGAGAGAGACA 59.991 47.826 0.00 0.00 38.43 3.41
784 884 3.704800 TTCGGAGAGAGAGAGAGACAA 57.295 47.619 0.00 0.00 38.43 3.18
785 885 3.260475 TCGGAGAGAGAGAGAGACAAG 57.740 52.381 0.00 0.00 0.00 3.16
786 886 2.093181 TCGGAGAGAGAGAGAGACAAGG 60.093 54.545 0.00 0.00 0.00 3.61
787 887 2.654863 GGAGAGAGAGAGAGACAAGGG 58.345 57.143 0.00 0.00 0.00 3.95
788 888 2.024414 GAGAGAGAGAGAGACAAGGGC 58.976 57.143 0.00 0.00 0.00 5.19
789 889 1.111277 GAGAGAGAGAGACAAGGGCC 58.889 60.000 0.00 0.00 0.00 5.80
790 890 0.682855 AGAGAGAGAGACAAGGGCCG 60.683 60.000 0.00 0.00 0.00 6.13
791 891 2.185608 GAGAGAGACAAGGGCCGC 59.814 66.667 0.00 0.00 0.00 6.53
792 892 2.604686 AGAGAGACAAGGGCCGCA 60.605 61.111 0.00 0.00 0.00 5.69
831 931 2.954611 GGAACAAAGAGGCACGGC 59.045 61.111 0.00 0.00 0.00 5.68
892 992 1.707200 GAGAGGGAGGGAGGAACCT 59.293 63.158 0.00 0.00 45.57 3.50
961 1078 3.877450 GGCTCGGGCATCCATGGA 61.877 66.667 18.88 18.88 40.87 3.41
1066 1222 1.383803 GAGGAGGAGGCCATGGACT 60.384 63.158 23.88 23.88 35.26 3.85
1067 1223 0.985490 GAGGAGGAGGCCATGGACTT 60.985 60.000 24.53 6.51 30.74 3.01
1068 1224 1.225704 GGAGGAGGCCATGGACTTG 59.774 63.158 24.53 0.00 30.74 3.16
1325 1481 1.332997 GGGATTCTGCAATCTCAAGCG 59.667 52.381 0.00 0.00 39.14 4.68
1330 1486 0.674581 CTGCAATCTCAAGCGGGTCA 60.675 55.000 0.00 0.00 33.53 4.02
1332 1488 1.986575 GCAATCTCAAGCGGGTCAGC 61.987 60.000 0.00 0.00 37.41 4.26
1351 1525 1.458927 CCCCTCCCTTTTCAACCGT 59.541 57.895 0.00 0.00 0.00 4.83
1392 1566 1.985622 AAGGAGTTGGATGGATGGGA 58.014 50.000 0.00 0.00 0.00 4.37
1417 1592 3.312718 GCCATTGGCCAGCAACCA 61.313 61.111 17.28 0.00 44.06 3.67
1434 1609 0.542702 CCAAGCATGTGAACCCCCTT 60.543 55.000 0.00 0.00 0.00 3.95
1441 1616 4.995058 TGAACCCCCTTCCGGCCT 62.995 66.667 0.00 0.00 0.00 5.19
1452 1627 0.922243 TTCCGGCCTTCCCCCTTTAT 60.922 55.000 0.00 0.00 0.00 1.40
1455 1630 0.551396 CGGCCTTCCCCCTTTATTCT 59.449 55.000 0.00 0.00 0.00 2.40
1476 1651 1.363807 GCCCGCCATTAATTGCTCC 59.636 57.895 9.59 0.00 0.00 4.70
1482 1657 3.144506 CGCCATTAATTGCTCCATCTCT 58.855 45.455 9.59 0.00 0.00 3.10
1483 1658 3.567164 CGCCATTAATTGCTCCATCTCTT 59.433 43.478 9.59 0.00 0.00 2.85
1503 1681 7.727181 TCTCTTGGAGCAGTAGTATAATTTCC 58.273 38.462 0.00 0.00 0.00 3.13
1532 1722 1.545841 GGCTCGGAGGTTTGGATTTT 58.454 50.000 7.20 0.00 0.00 1.82
1540 1730 5.595133 TCGGAGGTTTGGATTTTAACAACTT 59.405 36.000 0.00 0.00 0.00 2.66
1543 1733 7.042992 CGGAGGTTTGGATTTTAACAACTTTTC 60.043 37.037 0.00 0.00 0.00 2.29
1550 1740 8.850454 TGGATTTTAACAACTTTTCTTCTTCG 57.150 30.769 0.00 0.00 0.00 3.79
1564 1754 1.883084 CTTCGGCGATTCTTCCGGG 60.883 63.158 11.76 0.00 45.31 5.73
1565 1755 2.573609 CTTCGGCGATTCTTCCGGGT 62.574 60.000 11.76 0.00 45.31 5.28
1595 1786 3.313526 CACCCAAAATGCTATCTTCTCGG 59.686 47.826 0.00 0.00 0.00 4.63
1615 1806 2.297033 GGCTGATTTCTTGGCTTCAACA 59.703 45.455 0.00 0.00 0.00 3.33
1617 1808 4.562143 GGCTGATTTCTTGGCTTCAACAAT 60.562 41.667 0.00 0.00 0.00 2.71
1630 1821 5.065731 GGCTTCAACAATAGATTCTCCACAG 59.934 44.000 0.00 0.00 0.00 3.66
1638 1829 7.278875 ACAATAGATTCTCCACAGAAATCTCC 58.721 38.462 0.43 0.00 42.14 3.71
1650 1841 2.848694 AGAAATCTCCTCTCCATGCCAA 59.151 45.455 0.00 0.00 0.00 4.52
1662 1853 1.135024 CCATGCCAAGTTGGATTTCCG 60.135 52.381 26.52 6.64 40.96 4.30
1675 1866 0.323451 ATTTCCGGGGGCTGTTCTTC 60.323 55.000 0.00 0.00 0.00 2.87
1688 1879 3.321968 GCTGTTCTTCCTCCACCATTTTT 59.678 43.478 0.00 0.00 0.00 1.94
1698 1889 7.219601 TCCTCCACCATTTTTGGATCTATTA 57.780 36.000 0.00 0.00 42.43 0.98
1701 1892 7.094634 CCTCCACCATTTTTGGATCTATTATCG 60.095 40.741 0.00 0.00 42.43 2.92
1706 1897 9.712305 ACCATTTTTGGATCTATTATCGACTAG 57.288 33.333 0.00 0.00 0.00 2.57
1707 1898 8.660373 CCATTTTTGGATCTATTATCGACTAGC 58.340 37.037 0.00 0.00 0.00 3.42
1708 1899 9.208022 CATTTTTGGATCTATTATCGACTAGCA 57.792 33.333 0.00 0.00 0.00 3.49
1709 1900 8.818141 TTTTTGGATCTATTATCGACTAGCAG 57.182 34.615 0.00 0.00 0.00 4.24
1713 1904 6.316640 TGGATCTATTATCGACTAGCAGTAGC 59.683 42.308 0.00 0.00 42.56 3.58
1730 1921 2.512286 CATCCATCCAGCGTGCGT 60.512 61.111 0.00 0.00 0.00 5.24
1731 1922 1.227234 CATCCATCCAGCGTGCGTA 60.227 57.895 0.00 0.00 0.00 4.42
1732 1923 0.809636 CATCCATCCAGCGTGCGTAA 60.810 55.000 0.00 0.00 0.00 3.18
1733 1924 0.106708 ATCCATCCAGCGTGCGTAAT 59.893 50.000 0.00 0.00 0.00 1.89
1734 1925 0.529773 TCCATCCAGCGTGCGTAATC 60.530 55.000 0.00 0.00 0.00 1.75
1735 1926 1.559814 CATCCAGCGTGCGTAATCG 59.440 57.895 0.00 0.00 40.37 3.34
1818 2020 7.199167 TCATTCTCATGGATTTCCTTCTGTA 57.801 36.000 0.00 0.00 36.82 2.74
1819 2021 7.632861 TCATTCTCATGGATTTCCTTCTGTAA 58.367 34.615 0.00 0.00 36.82 2.41
1820 2022 8.108999 TCATTCTCATGGATTTCCTTCTGTAAA 58.891 33.333 0.00 0.00 36.82 2.01
1821 2023 8.742777 CATTCTCATGGATTTCCTTCTGTAAAA 58.257 33.333 0.00 0.00 36.82 1.52
1822 2024 8.704849 TTCTCATGGATTTCCTTCTGTAAAAA 57.295 30.769 0.00 0.00 36.82 1.94
1823 2025 8.884124 TCTCATGGATTTCCTTCTGTAAAAAT 57.116 30.769 0.00 0.00 36.82 1.82
1824 2026 9.973661 TCTCATGGATTTCCTTCTGTAAAAATA 57.026 29.630 0.00 0.00 36.82 1.40
1912 2115 1.359848 CGGTTACCACACTGATCTGC 58.640 55.000 1.13 0.00 0.00 4.26
1935 2138 4.523083 TGGTGAATTTGCCATCTAGTACC 58.477 43.478 0.00 0.00 0.00 3.34
1956 2165 0.040958 GTTGCTCAACTTCAGCGTGG 60.041 55.000 5.56 0.00 40.01 4.94
2110 2322 1.372087 CCAAGAGGAAGCGCACCATC 61.372 60.000 21.98 14.34 36.89 3.51
2205 2643 2.291540 ACCCAATCATTACCACCCACTG 60.292 50.000 0.00 0.00 0.00 3.66
2207 2645 3.016736 CCAATCATTACCACCCACTGTC 58.983 50.000 0.00 0.00 0.00 3.51
2224 2666 3.029074 CTGTCGTTGAACTTTTGCTTCG 58.971 45.455 0.00 0.00 0.00 3.79
2226 2668 2.031191 GTCGTTGAACTTTTGCTTCGGA 59.969 45.455 0.00 0.00 0.00 4.55
2227 2669 2.875933 TCGTTGAACTTTTGCTTCGGAT 59.124 40.909 0.00 0.00 0.00 4.18
2228 2670 3.314080 TCGTTGAACTTTTGCTTCGGATT 59.686 39.130 0.00 0.00 0.00 3.01
2229 2671 3.664025 CGTTGAACTTTTGCTTCGGATTC 59.336 43.478 0.00 0.00 0.00 2.52
2232 2674 5.452078 TGAACTTTTGCTTCGGATTCATT 57.548 34.783 0.00 0.00 0.00 2.57
2245 2687 1.672881 GATTCATTTGCCAGGTCCTCG 59.327 52.381 0.00 0.00 0.00 4.63
2251 2693 4.803426 GCCAGGTCCTCGCTGTCG 62.803 72.222 0.47 0.00 0.00 4.35
2329 2771 1.432251 CGGCAAGATCGTCTACCGT 59.568 57.895 15.14 0.00 39.84 4.83
2368 2810 4.778143 GGCAAGGTGTCGGCGGAT 62.778 66.667 7.21 0.00 0.00 4.18
2376 2818 2.511600 GTCGGCGGATGTTCCTGG 60.512 66.667 7.21 0.00 33.30 4.45
2432 2874 2.592993 GGTGCCAGTCAGCAGGGTA 61.593 63.158 0.00 0.00 45.14 3.69
2539 2993 2.027377 CAGTCAGCCAGAGGAAGAACAT 60.027 50.000 0.00 0.00 0.00 2.71
2555 3009 0.897621 ACATCAGCCATCGAGTGTGA 59.102 50.000 0.00 0.00 0.00 3.58
2567 3021 1.269778 CGAGTGTGAAACCTGCTGAGA 60.270 52.381 0.00 0.00 34.36 3.27
2572 3026 2.079925 GTGAAACCTGCTGAGATGTCC 58.920 52.381 0.00 0.00 0.00 4.02
2577 3031 1.812922 CTGCTGAGATGTCCACGGC 60.813 63.158 0.00 0.00 36.58 5.68
2578 3032 2.887568 GCTGAGATGTCCACGGCG 60.888 66.667 4.80 4.80 0.00 6.46
2579 3033 2.202797 CTGAGATGTCCACGGCGG 60.203 66.667 13.24 0.00 0.00 6.13
2580 3034 2.678580 TGAGATGTCCACGGCGGA 60.679 61.111 13.24 0.00 43.61 5.54
2634 3091 4.580167 CAGGAACAAAGAGTCAACAATGGA 59.420 41.667 0.00 0.00 0.00 3.41
2689 3146 0.532862 GTGCCAGTGTGCTGTACTGT 60.533 55.000 12.34 0.00 43.05 3.55
2701 3158 0.178301 TGTACTGTGTGTTGCCGGAA 59.822 50.000 5.05 0.00 0.00 4.30
2745 3202 2.457366 ACTTCGAGTCGGCAAGAAAT 57.543 45.000 17.91 0.00 0.00 2.17
2761 3218 2.300152 AGAAATTGACTCGACTGAGCCA 59.700 45.455 0.00 0.00 46.69 4.75
2787 3244 0.181350 GAAGGGGATGGCGATCTGTT 59.819 55.000 8.71 0.16 0.00 3.16
2788 3245 0.625849 AAGGGGATGGCGATCTGTTT 59.374 50.000 8.71 0.00 0.00 2.83
2803 3260 0.605589 TGTTTTGCTTATTGCCCCCG 59.394 50.000 0.00 0.00 42.00 5.73
2806 3263 0.682855 TTTGCTTATTGCCCCCGAGG 60.683 55.000 0.00 0.00 42.00 4.63
2832 3289 0.251474 AATTCAGGCAGGAGCAGCAA 60.251 50.000 0.00 0.00 44.61 3.91
2848 3305 3.601356 CAGCAATGATTCTAAGCGTTCG 58.399 45.455 0.00 0.00 0.00 3.95
2850 3307 3.553511 AGCAATGATTCTAAGCGTTCGAG 59.446 43.478 0.00 0.00 0.00 4.04
2854 3311 4.168922 TGATTCTAAGCGTTCGAGTTCA 57.831 40.909 0.00 0.00 0.00 3.18
2855 3312 4.166523 TGATTCTAAGCGTTCGAGTTCAG 58.833 43.478 0.00 0.00 0.00 3.02
2857 3314 0.992802 CTAAGCGTTCGAGTTCAGGC 59.007 55.000 0.00 0.00 0.00 4.85
2938 3395 3.344137 TTCTGGGGGATCCAAGCGC 62.344 63.158 15.23 0.00 46.51 5.92
3079 3536 0.942410 CCGAACGTTCTTCTTCCGCA 60.942 55.000 24.80 0.00 0.00 5.69
3088 3545 4.438336 CGTTCTTCTTCCGCAGTATCTACA 60.438 45.833 0.00 0.00 0.00 2.74
3115 3572 4.309933 CTGAGGATTTGCAAAAGGAAACC 58.690 43.478 17.19 12.15 0.00 3.27
3534 3991 6.624352 TTCTATTTGGCATCTACATTGCTC 57.376 37.500 0.00 0.00 40.03 4.26
3536 3993 7.066307 TCTATTTGGCATCTACATTGCTCTA 57.934 36.000 0.00 0.00 40.03 2.43
3581 4041 3.827722 ACTGGAACCCGATTTTCTTTCA 58.172 40.909 0.00 0.00 0.00 2.69
3610 4070 8.942338 ATACAGATATGTTTTCTGCGAAACTA 57.058 30.769 0.00 2.12 43.57 2.24
3678 4138 0.382515 GCCACGTTTACAAGGCACAA 59.617 50.000 7.41 0.00 46.26 3.33
3753 4213 4.933400 GCACTTCAGGAGTTTATTACGGAA 59.067 41.667 0.00 0.00 36.10 4.30
3816 4276 4.228210 TCACTAAGGGGATTCAGCTTTGAT 59.772 41.667 0.00 0.00 0.00 2.57
3911 4375 5.161358 TCATGATGAAATACGCGACCTATC 58.839 41.667 15.93 9.31 0.00 2.08
3929 4393 0.479589 TCCCATCCCCAACCCTCTTT 60.480 55.000 0.00 0.00 0.00 2.52
3930 4394 0.413434 CCCATCCCCAACCCTCTTTT 59.587 55.000 0.00 0.00 0.00 2.27
3931 4395 1.203300 CCCATCCCCAACCCTCTTTTT 60.203 52.381 0.00 0.00 0.00 1.94
3936 4400 3.839778 TCCCCAACCCTCTTTTTAAGTG 58.160 45.455 0.00 0.00 0.00 3.16
3975 4440 1.265365 GTTCTTCAGGCAAGTGTGAGC 59.735 52.381 0.00 0.00 33.27 4.26
4038 4503 2.237393 TGCAAAGGCGCTTGAATTTT 57.763 40.000 13.07 0.17 45.35 1.82
4267 4748 3.953612 TGATGGATGAATTGTGGTTAGCC 59.046 43.478 0.00 0.00 0.00 3.93
4407 5030 2.958355 ACATCACAGGAACTTTTGGGTG 59.042 45.455 0.00 0.00 34.60 4.61
4724 5515 5.255710 TGCTCTGAGAACAAGATAGTAGC 57.744 43.478 9.28 0.00 0.00 3.58
4818 5609 1.280746 CTCTTGCGGTGCACAAGTG 59.719 57.895 20.43 10.76 43.97 3.16
4923 5857 2.514824 GTGGATTCGGCTCTGGGC 60.515 66.667 0.00 0.00 40.90 5.36
4941 5875 1.993370 GGCAACGACTATGACTGTGAC 59.007 52.381 0.00 0.00 0.00 3.67
4965 5899 2.026879 GAGAGGATGACGCTCGCC 59.973 66.667 0.00 0.00 36.29 5.54
4986 5920 4.700365 TCGCTGTGCACGAGGACG 62.700 66.667 13.13 11.01 45.75 4.79
5123 6134 3.264947 CAGGTGCTGAAGCTGCTG 58.735 61.111 1.35 0.00 46.71 4.41
5135 6146 2.765807 CTGCTGGAGGGGGACGAT 60.766 66.667 0.00 0.00 0.00 3.73
5141 6152 1.381327 GGAGGGGGACGATGAGACA 60.381 63.158 0.00 0.00 0.00 3.41
5228 6239 1.180029 GCTCAAACATGCAGTCCCAT 58.820 50.000 0.00 0.00 0.00 4.00
5257 6268 4.783621 GCTGCTGGGCGTGGATGA 62.784 66.667 0.00 0.00 0.00 2.92
5258 6269 2.513204 CTGCTGGGCGTGGATGAG 60.513 66.667 0.00 0.00 0.00 2.90
5259 6270 4.100084 TGCTGGGCGTGGATGAGG 62.100 66.667 0.00 0.00 0.00 3.86
5515 6573 1.704387 CTGCTCGTGTGTGTGTGCAA 61.704 55.000 0.00 0.00 0.00 4.08
5518 6576 2.024588 CGTGTGTGTGTGCAAGGC 59.975 61.111 0.00 0.00 0.00 4.35
5666 6731 9.645128 ATTATGAGGAATGAATGTATGGTTTCA 57.355 29.630 0.00 0.00 36.38 2.69
5677 6742 3.695556 TGTATGGTTTCATGGTGCATCAG 59.304 43.478 5.59 0.00 34.96 2.90
5791 6860 0.036875 GCACTGTTTACCTGCCCTCT 59.963 55.000 0.00 0.00 0.00 3.69
5793 6862 1.625818 CACTGTTTACCTGCCCTCTCT 59.374 52.381 0.00 0.00 0.00 3.10
5794 6863 1.903183 ACTGTTTACCTGCCCTCTCTC 59.097 52.381 0.00 0.00 0.00 3.20
5878 6954 9.243637 CTGTAGAGAAGAACAGTTCATTATAGC 57.756 37.037 15.85 1.97 38.62 2.97
5999 7243 1.153509 GTGGAGCATGCATTTGGGC 60.154 57.895 21.98 0.00 39.99 5.36
6089 7412 2.901042 GATCCCACGAGGTGTCCC 59.099 66.667 0.00 0.00 36.75 4.46
6090 7413 1.987855 GATCCCACGAGGTGTCCCA 60.988 63.158 0.00 0.00 36.75 4.37
6092 7415 3.238497 CCCACGAGGTGTCCCACA 61.238 66.667 0.00 0.00 35.86 4.17
6101 7424 4.498346 TGTCCCACACAGCCAATG 57.502 55.556 0.00 0.00 0.00 2.82
6102 7425 1.536180 TGTCCCACACAGCCAATGT 59.464 52.632 0.00 0.00 45.43 2.71
6110 7433 2.965805 ACAGCCAATGTGATGTGGG 58.034 52.632 0.00 0.00 41.91 4.61
6165 7488 3.781307 TCGGCCGGGGTTGATGAG 61.781 66.667 27.83 0.00 0.00 2.90
6209 7532 1.217511 CCAGACGTCTGATGCTGCT 59.782 57.895 40.21 4.63 46.59 4.24
6210 7533 0.805322 CCAGACGTCTGATGCTGCTC 60.805 60.000 40.21 0.27 46.59 4.26
6269 7594 8.990163 TTGTTGATTATATAGAGAAAACCCCC 57.010 34.615 0.00 0.00 0.00 5.40
6270 7595 8.108378 TGTTGATTATATAGAGAAAACCCCCA 57.892 34.615 0.00 0.00 0.00 4.96
6273 7598 2.994186 TATAGAGAAAACCCCCACGC 57.006 50.000 0.00 0.00 0.00 5.34
6275 7600 1.474332 TAGAGAAAACCCCCACGCGT 61.474 55.000 5.58 5.58 0.00 6.01
6277 7602 2.125202 GAGAAAACCCCCACGCGTTG 62.125 60.000 10.22 6.05 0.00 4.10
6278 7603 3.834447 GAAAACCCCCACGCGTTGC 62.834 63.158 10.22 0.00 0.00 4.17
6287 7612 4.388499 ACGCGTTGCTCCCGGAAT 62.388 61.111 5.58 0.00 0.00 3.01
6288 7613 3.564027 CGCGTTGCTCCCGGAATC 61.564 66.667 0.73 0.00 0.00 2.52
6334 7659 7.253422 ACTTGATTGTATGAAACTTGCATAGC 58.747 34.615 0.00 0.00 0.00 2.97
6336 7661 8.504812 TTGATTGTATGAAACTTGCATAGCTA 57.495 30.769 0.00 0.00 0.00 3.32
6337 7662 8.146479 TGATTGTATGAAACTTGCATAGCTAG 57.854 34.615 0.00 0.00 37.42 3.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.463056 CTCGCATCGCACAGGTAAAAA 59.537 47.619 0.00 0.00 0.00 1.94
14 15 1.075542 CTCGCATCGCACAGGTAAAA 58.924 50.000 0.00 0.00 0.00 1.52
15 16 0.037697 ACTCGCATCGCACAGGTAAA 60.038 50.000 0.00 0.00 0.00 2.01
16 17 0.812549 TACTCGCATCGCACAGGTAA 59.187 50.000 0.00 0.00 0.00 2.85
17 18 0.812549 TTACTCGCATCGCACAGGTA 59.187 50.000 0.00 0.00 0.00 3.08
18 19 0.037697 TTTACTCGCATCGCACAGGT 60.038 50.000 0.00 0.00 0.00 4.00
19 20 1.075542 TTTTACTCGCATCGCACAGG 58.924 50.000 0.00 0.00 0.00 4.00
20 21 2.873170 TTTTTACTCGCATCGCACAG 57.127 45.000 0.00 0.00 0.00 3.66
36 37 1.662517 CTTTTGGCCAACCGCTTTTT 58.337 45.000 20.35 0.00 39.70 1.94
37 38 0.179059 CCTTTTGGCCAACCGCTTTT 60.179 50.000 20.35 0.00 39.70 2.27
38 39 1.045911 TCCTTTTGGCCAACCGCTTT 61.046 50.000 20.35 0.00 39.70 3.51
39 40 1.456705 TCCTTTTGGCCAACCGCTT 60.457 52.632 20.35 0.00 39.70 4.68
40 41 1.903404 CTCCTTTTGGCCAACCGCT 60.903 57.895 20.35 0.00 39.70 5.52
41 42 1.866853 CTCTCCTTTTGGCCAACCGC 61.867 60.000 20.35 0.00 39.70 5.68
42 43 1.244019 CCTCTCCTTTTGGCCAACCG 61.244 60.000 20.35 12.03 39.70 4.44
43 44 0.900182 CCCTCTCCTTTTGGCCAACC 60.900 60.000 20.35 0.00 40.12 3.77
44 45 0.178961 ACCCTCTCCTTTTGGCCAAC 60.179 55.000 20.35 0.00 40.12 3.77
45 46 0.112412 GACCCTCTCCTTTTGGCCAA 59.888 55.000 16.05 16.05 40.12 4.52
46 47 1.767692 GACCCTCTCCTTTTGGCCA 59.232 57.895 0.00 0.00 40.12 5.36
47 48 1.000771 GGACCCTCTCCTTTTGGCC 60.001 63.158 0.00 0.00 40.12 5.36
48 49 1.377333 CGGACCCTCTCCTTTTGGC 60.377 63.158 0.00 0.00 40.12 4.52
49 50 1.377333 GCGGACCCTCTCCTTTTGG 60.377 63.158 0.00 0.00 36.80 3.28
50 51 0.955919 GTGCGGACCCTCTCCTTTTG 60.956 60.000 0.00 0.00 36.80 2.44
51 52 1.375326 GTGCGGACCCTCTCCTTTT 59.625 57.895 0.00 0.00 36.80 2.27
52 53 1.201429 ATGTGCGGACCCTCTCCTTT 61.201 55.000 4.04 0.00 36.80 3.11
53 54 1.201429 AATGTGCGGACCCTCTCCTT 61.201 55.000 4.04 0.00 36.80 3.36
54 55 1.201429 AAATGTGCGGACCCTCTCCT 61.201 55.000 4.04 0.00 36.80 3.69
55 56 0.539986 TAAATGTGCGGACCCTCTCC 59.460 55.000 4.04 0.00 35.33 3.71
56 57 1.653151 GTAAATGTGCGGACCCTCTC 58.347 55.000 4.04 0.00 0.00 3.20
57 58 0.252197 GGTAAATGTGCGGACCCTCT 59.748 55.000 4.04 0.00 0.00 3.69
58 59 0.252197 AGGTAAATGTGCGGACCCTC 59.748 55.000 4.04 0.00 31.93 4.30
59 60 0.696501 AAGGTAAATGTGCGGACCCT 59.303 50.000 4.04 0.00 31.93 4.34
60 61 2.011947 GTAAGGTAAATGTGCGGACCC 58.988 52.381 4.04 0.00 31.93 4.46
61 62 2.702261 TGTAAGGTAAATGTGCGGACC 58.298 47.619 4.04 0.00 0.00 4.46
62 63 4.957759 ATTGTAAGGTAAATGTGCGGAC 57.042 40.909 0.00 0.00 0.00 4.79
63 64 5.968528 AAATTGTAAGGTAAATGTGCGGA 57.031 34.783 0.00 0.00 0.00 5.54
64 65 5.164002 GCAAAATTGTAAGGTAAATGTGCGG 60.164 40.000 0.00 0.00 0.00 5.69
65 66 5.633182 AGCAAAATTGTAAGGTAAATGTGCG 59.367 36.000 0.00 0.00 34.87 5.34
66 67 8.026607 TCTAGCAAAATTGTAAGGTAAATGTGC 58.973 33.333 0.00 0.00 32.08 4.57
67 68 9.906660 TTCTAGCAAAATTGTAAGGTAAATGTG 57.093 29.630 0.00 0.00 0.00 3.21
68 69 9.908152 GTTCTAGCAAAATTGTAAGGTAAATGT 57.092 29.630 0.00 0.00 0.00 2.71
71 72 9.344772 TGAGTTCTAGCAAAATTGTAAGGTAAA 57.655 29.630 0.00 0.00 0.00 2.01
72 73 8.911918 TGAGTTCTAGCAAAATTGTAAGGTAA 57.088 30.769 0.00 0.00 0.00 2.85
73 74 9.162764 GATGAGTTCTAGCAAAATTGTAAGGTA 57.837 33.333 0.00 0.00 0.00 3.08
74 75 7.885399 AGATGAGTTCTAGCAAAATTGTAAGGT 59.115 33.333 0.00 0.00 30.96 3.50
75 76 8.273780 AGATGAGTTCTAGCAAAATTGTAAGG 57.726 34.615 0.00 0.00 30.96 2.69
104 105 7.875041 AGGTGAATGAGACCAAATTATATCTCG 59.125 37.037 0.00 0.00 40.45 4.04
149 150 5.309323 ACACACACGCATTTTATAGCAAT 57.691 34.783 0.00 0.00 0.00 3.56
150 151 4.757799 ACACACACGCATTTTATAGCAA 57.242 36.364 0.00 0.00 0.00 3.91
159 160 1.001487 CCACATCAACACACACGCATT 60.001 47.619 0.00 0.00 0.00 3.56
160 161 0.592637 CCACATCAACACACACGCAT 59.407 50.000 0.00 0.00 0.00 4.73
171 172 3.008594 AGAACGGATACAACCCACATCAA 59.991 43.478 0.00 0.00 0.00 2.57
188 189 6.966632 TCTCATTCACTTTGAAAACAAGAACG 59.033 34.615 0.00 0.00 40.12 3.95
249 250 6.648310 CACACTACTTTCTGCAGATATATGGG 59.352 42.308 19.04 11.74 0.00 4.00
293 295 7.979444 TGTCGATTTTCTTGGATAGTCTTTT 57.021 32.000 0.00 0.00 0.00 2.27
298 300 6.540189 CCAGAATGTCGATTTTCTTGGATAGT 59.460 38.462 9.39 0.00 29.85 2.12
299 301 6.540189 ACCAGAATGTCGATTTTCTTGGATAG 59.460 38.462 21.51 9.15 29.85 2.08
300 302 6.414732 ACCAGAATGTCGATTTTCTTGGATA 58.585 36.000 21.51 0.00 29.85 2.59
317 339 9.413734 CATAAATCTTTCTTTAGGGACCAGAAT 57.586 33.333 0.00 0.00 0.00 2.40
320 342 7.415653 GCACATAAATCTTTCTTTAGGGACCAG 60.416 40.741 0.00 0.00 29.11 4.00
321 343 6.377146 GCACATAAATCTTTCTTTAGGGACCA 59.623 38.462 0.00 0.00 29.11 4.02
322 344 6.183360 GGCACATAAATCTTTCTTTAGGGACC 60.183 42.308 0.00 0.00 29.11 4.46
324 346 6.731467 AGGCACATAAATCTTTCTTTAGGGA 58.269 36.000 0.00 0.00 29.11 4.20
325 347 6.238484 CGAGGCACATAAATCTTTCTTTAGGG 60.238 42.308 0.00 0.00 29.11 3.53
327 349 7.539712 TCGAGGCACATAAATCTTTCTTTAG 57.460 36.000 0.00 0.00 0.00 1.85
328 350 7.915293 TTCGAGGCACATAAATCTTTCTTTA 57.085 32.000 0.00 0.00 0.00 1.85
332 354 6.422776 TCTTTCGAGGCACATAAATCTTTC 57.577 37.500 0.00 0.00 0.00 2.62
335 357 6.623767 GCTTTTCTTTCGAGGCACATAAATCT 60.624 38.462 0.00 0.00 0.00 2.40
336 358 5.513141 GCTTTTCTTTCGAGGCACATAAATC 59.487 40.000 0.00 0.00 0.00 2.17
337 359 5.402398 GCTTTTCTTTCGAGGCACATAAAT 58.598 37.500 0.00 0.00 0.00 1.40
343 395 0.110192 CCGCTTTTCTTTCGAGGCAC 60.110 55.000 0.00 0.00 0.00 5.01
345 397 1.154207 GCCGCTTTTCTTTCGAGGC 60.154 57.895 0.00 0.00 36.51 4.70
350 402 2.774439 TCAAGTGCCGCTTTTCTTTC 57.226 45.000 0.00 0.00 34.69 2.62
394 457 5.300792 TGCCGAATATACCCATTTTTCCTTC 59.699 40.000 0.00 0.00 0.00 3.46
417 494 6.366061 CCGCTCTTTTTATTTCCCTTTTCTTG 59.634 38.462 0.00 0.00 0.00 3.02
424 501 2.755103 CTGCCGCTCTTTTTATTTCCCT 59.245 45.455 0.00 0.00 0.00 4.20
456 536 4.638865 CCCCACCATTTGTTTAGTACTAGC 59.361 45.833 2.23 1.54 0.00 3.42
458 538 5.515184 CCACCCCACCATTTGTTTAGTACTA 60.515 44.000 0.00 0.00 0.00 1.82
459 539 4.403734 CACCCCACCATTTGTTTAGTACT 58.596 43.478 0.00 0.00 0.00 2.73
460 540 3.508402 CCACCCCACCATTTGTTTAGTAC 59.492 47.826 0.00 0.00 0.00 2.73
495 583 0.185901 TGGTTTGGGCTCTGCTTTCT 59.814 50.000 0.00 0.00 0.00 2.52
499 587 1.115326 GGTTTGGTTTGGGCTCTGCT 61.115 55.000 0.00 0.00 0.00 4.24
500 588 1.367471 GGTTTGGTTTGGGCTCTGC 59.633 57.895 0.00 0.00 0.00 4.26
503 591 0.105964 GGTTGGTTTGGTTTGGGCTC 59.894 55.000 0.00 0.00 0.00 4.70
504 592 1.341913 GGGTTGGTTTGGTTTGGGCT 61.342 55.000 0.00 0.00 0.00 5.19
505 593 1.147376 GGGTTGGTTTGGTTTGGGC 59.853 57.895 0.00 0.00 0.00 5.36
506 594 0.179234 GTGGGTTGGTTTGGTTTGGG 59.821 55.000 0.00 0.00 0.00 4.12
509 597 0.533032 CGTGTGGGTTGGTTTGGTTT 59.467 50.000 0.00 0.00 0.00 3.27
511 599 1.755008 CCGTGTGGGTTGGTTTGGT 60.755 57.895 0.00 0.00 0.00 3.67
513 601 2.415426 GCCGTGTGGGTTGGTTTG 59.585 61.111 0.00 0.00 38.44 2.93
514 602 2.835895 GGCCGTGTGGGTTGGTTT 60.836 61.111 0.00 0.00 38.44 3.27
515 603 4.130554 TGGCCGTGTGGGTTGGTT 62.131 61.111 0.00 0.00 38.44 3.67
516 604 4.887190 GTGGCCGTGTGGGTTGGT 62.887 66.667 0.00 0.00 38.44 3.67
592 692 4.144727 TCTCTCTCCTCCGGGGGC 62.145 72.222 18.55 0.00 35.33 5.80
593 693 2.197324 CTCTCTCTCCTCCGGGGG 59.803 72.222 16.89 16.89 35.33 5.40
594 694 1.150536 CTCTCTCTCTCCTCCGGGG 59.849 68.421 0.00 0.00 0.00 5.73
618 718 0.525668 GTCGTGTGTATAGCAGCGCT 60.526 55.000 2.64 2.64 43.41 5.92
621 721 1.904144 TTCGTCGTGTGTATAGCAGC 58.096 50.000 0.00 0.00 0.00 5.25
622 722 2.216488 GCATTCGTCGTGTGTATAGCAG 59.784 50.000 0.00 0.00 0.00 4.24
623 723 2.190161 GCATTCGTCGTGTGTATAGCA 58.810 47.619 0.00 0.00 0.00 3.49
625 725 1.187271 GCGCATTCGTCGTGTGTATAG 59.813 52.381 0.30 0.00 38.14 1.31
626 726 1.193644 GCGCATTCGTCGTGTGTATA 58.806 50.000 0.30 0.00 38.14 1.47
627 727 1.739093 CGCGCATTCGTCGTGTGTAT 61.739 55.000 8.75 0.00 38.14 2.29
628 728 2.430146 CGCGCATTCGTCGTGTGTA 61.430 57.895 8.75 0.00 38.14 2.90
629 729 3.762992 CGCGCATTCGTCGTGTGT 61.763 61.111 8.75 0.00 38.14 3.72
630 730 4.483683 CCGCGCATTCGTCGTGTG 62.484 66.667 8.75 0.00 38.14 3.82
648 748 3.640000 GAATCGTGCGGGCATCGG 61.640 66.667 12.95 0.93 39.69 4.18
649 749 3.988385 CGAATCGTGCGGGCATCG 61.988 66.667 0.00 3.13 42.76 3.84
650 750 1.590525 TACGAATCGTGCGGGCATC 60.591 57.895 19.42 0.00 41.39 3.91
651 751 1.881252 GTACGAATCGTGCGGGCAT 60.881 57.895 19.42 0.00 41.39 4.40
652 752 2.507547 GTACGAATCGTGCGGGCA 60.508 61.111 19.42 0.00 41.39 5.36
659 759 1.804326 GCTGCCACGTACGAATCGT 60.804 57.895 24.41 14.28 44.35 3.73
660 760 2.845739 CGCTGCCACGTACGAATCG 61.846 63.158 24.41 11.76 0.00 3.34
661 761 2.995482 CGCTGCCACGTACGAATC 59.005 61.111 24.41 10.14 0.00 2.52
662 762 3.186047 GCGCTGCCACGTACGAAT 61.186 61.111 24.41 0.00 34.88 3.34
663 763 4.649310 TGCGCTGCCACGTACGAA 62.649 61.111 24.41 3.43 34.88 3.85
664 764 4.649310 TTGCGCTGCCACGTACGA 62.649 61.111 24.41 0.00 34.88 3.43
665 765 4.134187 CTTGCGCTGCCACGTACG 62.134 66.667 15.01 15.01 34.88 3.67
666 766 4.445545 GCTTGCGCTGCCACGTAC 62.446 66.667 9.73 0.00 34.88 3.67
667 767 4.978863 TGCTTGCGCTGCCACGTA 62.979 61.111 19.73 2.03 36.97 3.57
674 774 2.176055 CTCTTGCTGCTTGCGCTG 59.824 61.111 9.73 2.28 46.63 5.18
675 775 2.281345 ACTCTTGCTGCTTGCGCT 60.281 55.556 9.73 0.00 46.63 5.92
676 776 2.126965 CACTCTTGCTGCTTGCGC 60.127 61.111 0.00 0.00 46.63 6.09
677 777 2.126965 GCACTCTTGCTGCTTGCG 60.127 61.111 0.00 0.00 46.17 4.85
685 785 2.267681 GCTCCTGCATGCACTCTTGC 62.268 60.000 18.46 12.83 43.50 4.01
686 786 1.801332 GCTCCTGCATGCACTCTTG 59.199 57.895 18.46 6.59 39.41 3.02
687 787 1.744368 CGCTCCTGCATGCACTCTT 60.744 57.895 18.46 0.00 39.64 2.85
688 788 2.125229 CGCTCCTGCATGCACTCT 60.125 61.111 18.46 0.00 39.64 3.24
689 789 3.873883 GCGCTCCTGCATGCACTC 61.874 66.667 18.46 5.02 39.64 3.51
690 790 4.710167 TGCGCTCCTGCATGCACT 62.710 61.111 18.46 0.00 40.62 4.40
691 791 4.175489 CTGCGCTCCTGCATGCAC 62.175 66.667 18.46 6.53 45.26 4.57
692 792 4.710167 ACTGCGCTCCTGCATGCA 62.710 61.111 21.29 21.29 45.26 3.96
693 793 3.437795 AACTGCGCTCCTGCATGC 61.438 61.111 11.82 11.82 45.26 4.06
694 794 2.483745 CAACTGCGCTCCTGCATG 59.516 61.111 9.73 0.00 45.26 4.06
695 795 2.749044 CCAACTGCGCTCCTGCAT 60.749 61.111 9.73 0.00 45.26 3.96
698 798 3.965539 CTCCCCAACTGCGCTCCTG 62.966 68.421 9.73 2.30 0.00 3.86
699 799 3.710722 CTCCCCAACTGCGCTCCT 61.711 66.667 9.73 0.00 0.00 3.69
700 800 4.785453 CCTCCCCAACTGCGCTCC 62.785 72.222 9.73 0.00 0.00 4.70
705 805 3.951769 ATGCTGCCTCCCCAACTGC 62.952 63.158 0.00 0.00 0.00 4.40
706 806 1.751927 GATGCTGCCTCCCCAACTG 60.752 63.158 0.00 0.00 0.00 3.16
707 807 2.679716 GATGCTGCCTCCCCAACT 59.320 61.111 0.00 0.00 0.00 3.16
708 808 2.825836 CGATGCTGCCTCCCCAAC 60.826 66.667 0.00 0.00 0.00 3.77
709 809 2.819984 GAACGATGCTGCCTCCCCAA 62.820 60.000 0.00 0.00 0.00 4.12
710 810 3.329542 GAACGATGCTGCCTCCCCA 62.330 63.158 0.00 0.00 0.00 4.96
711 811 2.514824 GAACGATGCTGCCTCCCC 60.515 66.667 0.00 0.00 0.00 4.81
712 812 2.892425 CGAACGATGCTGCCTCCC 60.892 66.667 0.00 0.00 0.00 4.30
713 813 2.892425 CCGAACGATGCTGCCTCC 60.892 66.667 0.00 0.00 0.00 4.30
714 814 1.880340 CTCCGAACGATGCTGCCTC 60.880 63.158 0.00 0.00 0.00 4.70
715 815 2.185350 CTCCGAACGATGCTGCCT 59.815 61.111 0.00 0.00 0.00 4.75
716 816 2.892425 CCTCCGAACGATGCTGCC 60.892 66.667 0.00 0.00 0.00 4.85
717 817 2.125512 ACCTCCGAACGATGCTGC 60.126 61.111 0.00 0.00 0.00 5.25
718 818 1.874019 CGACCTCCGAACGATGCTG 60.874 63.158 0.00 0.00 41.76 4.41
719 819 2.341101 ACGACCTCCGAACGATGCT 61.341 57.895 0.00 0.00 41.76 3.79
720 820 2.158959 CACGACCTCCGAACGATGC 61.159 63.158 0.00 0.00 41.76 3.91
721 821 2.158959 GCACGACCTCCGAACGATG 61.159 63.158 0.00 0.00 41.76 3.84
722 822 2.181021 GCACGACCTCCGAACGAT 59.819 61.111 0.00 0.00 41.76 3.73
723 823 4.394078 CGCACGACCTCCGAACGA 62.394 66.667 0.00 0.00 40.50 3.85
724 824 4.394078 TCGCACGACCTCCGAACG 62.394 66.667 0.00 0.00 41.76 3.95
725 825 2.467946 TTCTCGCACGACCTCCGAAC 62.468 60.000 0.00 0.00 41.76 3.95
726 826 2.196382 CTTCTCGCACGACCTCCGAA 62.196 60.000 0.00 0.00 41.76 4.30
727 827 2.670592 TTCTCGCACGACCTCCGA 60.671 61.111 0.00 0.00 41.76 4.55
728 828 2.202492 CTTCTCGCACGACCTCCG 60.202 66.667 0.00 0.00 45.44 4.63
729 829 1.137825 CTCTTCTCGCACGACCTCC 59.862 63.158 0.00 0.00 0.00 4.30
730 830 0.179184 GACTCTTCTCGCACGACCTC 60.179 60.000 0.00 0.00 0.00 3.85
731 831 1.877367 GACTCTTCTCGCACGACCT 59.123 57.895 0.00 0.00 0.00 3.85
732 832 1.512310 CGACTCTTCTCGCACGACC 60.512 63.158 0.00 0.00 0.00 4.79
733 833 0.790124 GACGACTCTTCTCGCACGAC 60.790 60.000 0.00 0.00 37.15 4.34
734 834 0.949588 AGACGACTCTTCTCGCACGA 60.950 55.000 0.00 0.00 37.15 4.35
735 835 0.791238 CAGACGACTCTTCTCGCACG 60.791 60.000 0.00 0.00 37.15 5.34
736 836 0.238817 ACAGACGACTCTTCTCGCAC 59.761 55.000 0.00 0.00 37.15 5.34
737 837 0.238553 CACAGACGACTCTTCTCGCA 59.761 55.000 0.00 0.00 37.15 5.10
738 838 0.517755 TCACAGACGACTCTTCTCGC 59.482 55.000 0.00 0.00 37.15 5.03
739 839 2.845486 CTTCACAGACGACTCTTCTCG 58.155 52.381 0.00 0.00 39.68 4.04
740 840 2.030717 TGCTTCACAGACGACTCTTCTC 60.031 50.000 0.00 0.00 0.00 2.87
741 841 1.957177 TGCTTCACAGACGACTCTTCT 59.043 47.619 0.00 0.00 0.00 2.85
742 842 2.423926 TGCTTCACAGACGACTCTTC 57.576 50.000 0.00 0.00 0.00 2.87
753 853 1.686587 TCTCTCCGAAACTGCTTCACA 59.313 47.619 0.00 0.00 33.17 3.58
754 854 2.029828 TCTCTCTCCGAAACTGCTTCAC 60.030 50.000 0.00 0.00 33.17 3.18
755 855 2.230025 CTCTCTCTCCGAAACTGCTTCA 59.770 50.000 0.00 0.00 33.17 3.02
756 856 2.490115 TCTCTCTCTCCGAAACTGCTTC 59.510 50.000 0.00 0.00 0.00 3.86
757 857 2.491693 CTCTCTCTCTCCGAAACTGCTT 59.508 50.000 0.00 0.00 0.00 3.91
758 858 2.091541 CTCTCTCTCTCCGAAACTGCT 58.908 52.381 0.00 0.00 0.00 4.24
759 859 2.088423 TCTCTCTCTCTCCGAAACTGC 58.912 52.381 0.00 0.00 0.00 4.40
760 860 3.374058 GTCTCTCTCTCTCTCCGAAACTG 59.626 52.174 0.00 0.00 0.00 3.16
761 861 3.008594 TGTCTCTCTCTCTCTCCGAAACT 59.991 47.826 0.00 0.00 0.00 2.66
762 862 3.340034 TGTCTCTCTCTCTCTCCGAAAC 58.660 50.000 0.00 0.00 0.00 2.78
763 863 3.704800 TGTCTCTCTCTCTCTCCGAAA 57.295 47.619 0.00 0.00 0.00 3.46
764 864 3.605634 CTTGTCTCTCTCTCTCTCCGAA 58.394 50.000 0.00 0.00 0.00 4.30
765 865 2.093181 CCTTGTCTCTCTCTCTCTCCGA 60.093 54.545 0.00 0.00 0.00 4.55
766 866 2.288666 CCTTGTCTCTCTCTCTCTCCG 58.711 57.143 0.00 0.00 0.00 4.63
767 867 2.654863 CCCTTGTCTCTCTCTCTCTCC 58.345 57.143 0.00 0.00 0.00 3.71
768 868 2.024414 GCCCTTGTCTCTCTCTCTCTC 58.976 57.143 0.00 0.00 0.00 3.20
769 869 1.341976 GGCCCTTGTCTCTCTCTCTCT 60.342 57.143 0.00 0.00 0.00 3.10
770 870 1.111277 GGCCCTTGTCTCTCTCTCTC 58.889 60.000 0.00 0.00 0.00 3.20
771 871 0.682855 CGGCCCTTGTCTCTCTCTCT 60.683 60.000 0.00 0.00 0.00 3.10
772 872 1.813192 CGGCCCTTGTCTCTCTCTC 59.187 63.158 0.00 0.00 0.00 3.20
773 873 2.355193 GCGGCCCTTGTCTCTCTCT 61.355 63.158 0.00 0.00 0.00 3.10
774 874 2.185608 GCGGCCCTTGTCTCTCTC 59.814 66.667 0.00 0.00 0.00 3.20
775 875 2.604686 TGCGGCCCTTGTCTCTCT 60.605 61.111 0.00 0.00 0.00 3.10
776 876 2.435059 GTGCGGCCCTTGTCTCTC 60.435 66.667 0.00 0.00 0.00 3.20
777 877 4.021925 GGTGCGGCCCTTGTCTCT 62.022 66.667 0.00 0.00 0.00 3.10
840 940 2.363018 TCCTCCCTCTCGCTGTGG 60.363 66.667 0.00 0.00 0.00 4.17
841 941 1.379176 TCTCCTCCCTCTCGCTGTG 60.379 63.158 0.00 0.00 0.00 3.66
842 942 1.379309 GTCTCCTCCCTCTCGCTGT 60.379 63.158 0.00 0.00 0.00 4.40
845 945 3.213402 CCGTCTCCTCCCTCTCGC 61.213 72.222 0.00 0.00 0.00 5.03
846 946 1.378778 AACCGTCTCCTCCCTCTCG 60.379 63.158 0.00 0.00 0.00 4.04
847 947 1.950973 GCAACCGTCTCCTCCCTCTC 61.951 65.000 0.00 0.00 0.00 3.20
848 948 1.985116 GCAACCGTCTCCTCCCTCT 60.985 63.158 0.00 0.00 0.00 3.69
1046 1199 3.554342 CCATGGCCTCCTCCTCCG 61.554 72.222 3.32 0.00 0.00 4.63
1048 1201 0.985490 AAGTCCATGGCCTCCTCCTC 60.985 60.000 6.96 0.00 0.00 3.71
1308 1464 1.340405 ACCCGCTTGAGATTGCAGAAT 60.340 47.619 0.00 0.00 0.00 2.40
1330 1486 1.465172 GTTGAAAAGGGAGGGGGCT 59.535 57.895 0.00 0.00 0.00 5.19
1332 1488 1.304134 CGGTTGAAAAGGGAGGGGG 60.304 63.158 0.00 0.00 0.00 5.40
1337 1511 1.407258 CAAGCAACGGTTGAAAAGGGA 59.593 47.619 24.20 0.00 42.72 4.20
1362 1536 1.069227 CCAACTCCTTTTACAGCGCAC 60.069 52.381 11.47 0.00 0.00 5.34
1417 1592 0.251787 GGAAGGGGGTTCACATGCTT 60.252 55.000 0.00 0.00 36.82 3.91
1434 1609 0.922243 AATAAAGGGGGAAGGCCGGA 60.922 55.000 5.05 0.00 33.83 5.14
1441 1616 1.064240 GGGCGAAGAATAAAGGGGGAA 60.064 52.381 0.00 0.00 0.00 3.97
1452 1627 1.403679 CAATTAATGGCGGGCGAAGAA 59.596 47.619 0.00 0.00 0.00 2.52
1455 1630 1.034838 AGCAATTAATGGCGGGCGAA 61.035 50.000 9.20 0.00 34.54 4.70
1476 1651 9.202273 GAAATTATACTACTGCTCCAAGAGATG 57.798 37.037 0.00 0.00 0.00 2.90
1482 1657 7.047891 CACAGGAAATTATACTACTGCTCCAA 58.952 38.462 0.00 0.00 0.00 3.53
1483 1658 6.408092 CCACAGGAAATTATACTACTGCTCCA 60.408 42.308 0.00 0.00 0.00 3.86
1485 1660 5.992217 CCCACAGGAAATTATACTACTGCTC 59.008 44.000 0.00 0.00 33.47 4.26
1517 1707 5.447624 AGTTGTTAAAATCCAAACCTCCG 57.552 39.130 0.00 0.00 0.00 4.63
1520 1710 9.378551 GAAGAAAAGTTGTTAAAATCCAAACCT 57.621 29.630 0.00 0.00 0.00 3.50
1525 1715 7.918562 CCGAAGAAGAAAAGTTGTTAAAATCCA 59.081 33.333 0.00 0.00 0.00 3.41
1532 1722 4.121317 TCGCCGAAGAAGAAAAGTTGTTA 58.879 39.130 0.00 0.00 0.00 2.41
1540 1730 3.000727 GGAAGAATCGCCGAAGAAGAAA 58.999 45.455 0.00 0.00 0.00 2.52
1550 1740 3.202706 GCACCCGGAAGAATCGCC 61.203 66.667 0.73 0.00 0.00 5.54
1595 1786 3.648339 TGTTGAAGCCAAGAAATCAGC 57.352 42.857 0.00 0.00 32.06 4.26
1615 1806 7.568366 AGAGGAGATTTCTGTGGAGAATCTATT 59.432 37.037 0.00 0.00 38.05 1.73
1617 1808 6.439487 AGAGGAGATTTCTGTGGAGAATCTA 58.561 40.000 0.00 0.00 38.05 1.98
1630 1821 3.212685 CTTGGCATGGAGAGGAGATTTC 58.787 50.000 0.00 0.00 0.00 2.17
1638 1829 3.963733 TCCAACTTGGCATGGAGAG 57.036 52.632 4.20 0.00 40.74 3.20
1650 1841 2.238701 AGCCCCCGGAAATCCAACT 61.239 57.895 0.73 0.00 35.14 3.16
1662 1853 2.231380 TGGAGGAAGAACAGCCCCC 61.231 63.158 0.00 0.00 0.00 5.40
1688 1879 6.316640 GCTACTGCTAGTCGATAATAGATCCA 59.683 42.308 6.49 0.00 36.03 3.41
1698 1889 2.587522 TGGATGCTACTGCTAGTCGAT 58.412 47.619 0.00 0.00 40.48 3.59
1701 1892 2.630098 TGGATGGATGCTACTGCTAGTC 59.370 50.000 0.00 0.00 40.48 2.59
1706 1897 1.226686 CGCTGGATGGATGCTACTGC 61.227 60.000 0.00 0.00 40.20 4.40
1707 1898 0.105593 ACGCTGGATGGATGCTACTG 59.894 55.000 0.00 0.00 0.00 2.74
1708 1899 0.105593 CACGCTGGATGGATGCTACT 59.894 55.000 0.00 0.00 0.00 2.57
1709 1900 1.502163 GCACGCTGGATGGATGCTAC 61.502 60.000 0.00 0.00 33.44 3.58
1713 1904 0.809636 TTACGCACGCTGGATGGATG 60.810 55.000 0.00 0.00 0.00 3.51
1730 1921 6.321848 TCTGATTAGAATACACCGCGATTA 57.678 37.500 8.23 0.00 0.00 1.75
1731 1922 5.196341 TCTGATTAGAATACACCGCGATT 57.804 39.130 8.23 0.00 0.00 3.34
1732 1923 4.848562 TCTGATTAGAATACACCGCGAT 57.151 40.909 8.23 0.00 0.00 4.58
1733 1924 4.612939 CGATCTGATTAGAATACACCGCGA 60.613 45.833 8.23 0.00 36.32 5.87
1734 1925 3.604198 CGATCTGATTAGAATACACCGCG 59.396 47.826 0.00 0.00 36.32 6.46
1735 1926 4.547532 ACGATCTGATTAGAATACACCGC 58.452 43.478 0.00 0.00 36.32 5.68
1736 1927 6.003234 AGACGATCTGATTAGAATACACCG 57.997 41.667 0.00 0.00 36.32 4.94
1737 1928 7.380065 GTCAAGACGATCTGATTAGAATACACC 59.620 40.741 0.00 0.00 36.32 4.16
1738 1929 7.380065 GGTCAAGACGATCTGATTAGAATACAC 59.620 40.741 0.00 0.00 36.32 2.90
1739 1930 7.426410 GGTCAAGACGATCTGATTAGAATACA 58.574 38.462 0.00 0.00 36.32 2.29
1740 1931 6.864165 GGGTCAAGACGATCTGATTAGAATAC 59.136 42.308 0.00 0.00 36.32 1.89
1863 2065 2.352715 CGGAACAGGGGCAAAAATTCTC 60.353 50.000 0.00 0.00 0.00 2.87
1912 2115 4.576463 GGTACTAGATGGCAAATTCACCAG 59.424 45.833 0.00 0.00 39.88 4.00
1956 2165 1.534163 GCACAAGGGGAAGTTCGTTAC 59.466 52.381 0.00 0.00 0.00 2.50
1961 2170 0.804989 CATCGCACAAGGGGAAGTTC 59.195 55.000 0.00 0.00 42.27 3.01
1999 2211 2.353109 GCCCTTGCAAATCTTCACCTTC 60.353 50.000 0.00 0.00 37.47 3.46
2205 2643 2.031191 TCCGAAGCAAAAGTTCAACGAC 59.969 45.455 0.00 0.00 0.00 4.34
2207 2645 2.748461 TCCGAAGCAAAAGTTCAACG 57.252 45.000 0.00 0.00 0.00 4.10
2224 2666 2.027385 GAGGACCTGGCAAATGAATCC 58.973 52.381 0.00 0.00 0.00 3.01
2226 2668 1.755179 CGAGGACCTGGCAAATGAAT 58.245 50.000 0.00 0.00 0.00 2.57
2227 2669 0.960364 GCGAGGACCTGGCAAATGAA 60.960 55.000 22.39 0.00 35.33 2.57
2228 2670 1.377202 GCGAGGACCTGGCAAATGA 60.377 57.895 22.39 0.00 35.33 2.57
2229 2671 1.377725 AGCGAGGACCTGGCAAATG 60.378 57.895 27.81 0.00 37.67 2.32
2232 2674 3.240134 GACAGCGAGGACCTGGCAA 62.240 63.158 27.81 0.00 38.25 4.52
2245 2687 0.602905 AGTACTTGGCAACCGACAGC 60.603 55.000 0.00 0.00 0.00 4.40
2251 2693 2.561373 GCGCAGTACTTGGCAACC 59.439 61.111 0.30 0.00 0.00 3.77
2329 2771 3.003793 CGGAGTGAGCATTCGATTCTCTA 59.996 47.826 9.49 0.00 0.00 2.43
2368 2810 0.250858 CATCACCACAGCCAGGAACA 60.251 55.000 0.00 0.00 0.00 3.18
2376 2818 2.915349 ACATCTCATCATCACCACAGC 58.085 47.619 0.00 0.00 0.00 4.40
2420 2862 3.511477 TCTCTTCTTTACCCTGCTGACT 58.489 45.455 0.00 0.00 0.00 3.41
2432 2874 1.802069 GGCAACTCGCTCTCTTCTTT 58.198 50.000 0.00 0.00 41.91 2.52
2539 2993 1.608025 GGTTTCACACTCGATGGCTGA 60.608 52.381 0.00 0.00 0.00 4.26
2555 3009 1.609061 CGTGGACATCTCAGCAGGTTT 60.609 52.381 0.00 0.00 0.00 3.27
2572 3026 2.280524 TGAACCTGTTCCGCCGTG 60.281 61.111 7.51 0.00 38.77 4.94
2577 3031 2.408050 CTTCAGTCTGAACCTGTTCCG 58.592 52.381 11.36 1.65 38.77 4.30
2578 3032 2.147150 GCTTCAGTCTGAACCTGTTCC 58.853 52.381 11.36 0.00 38.77 3.62
2579 3033 2.805099 CTGCTTCAGTCTGAACCTGTTC 59.195 50.000 11.36 3.07 39.91 3.18
2580 3034 2.435805 TCTGCTTCAGTCTGAACCTGTT 59.564 45.455 11.36 0.00 32.21 3.16
2581 3035 2.042464 TCTGCTTCAGTCTGAACCTGT 58.958 47.619 11.36 0.00 32.21 4.00
2615 3072 4.277476 TGGTCCATTGTTGACTCTTTGTT 58.723 39.130 0.00 0.00 33.22 2.83
2634 3091 0.321653 GGCGACCACATCTTTCTGGT 60.322 55.000 0.00 0.00 43.86 4.00
2689 3146 0.817634 CACTCCTTTCCGGCAACACA 60.818 55.000 0.00 0.00 0.00 3.72
2701 3158 2.158623 TGCAACTGAATGGTCACTCCTT 60.159 45.455 0.00 0.00 37.07 3.36
2761 3218 3.411517 CCATCCCCTTCGGCTGGT 61.412 66.667 0.00 0.00 0.00 4.00
2803 3260 2.692041 CCTGCCTGAATTTCCATTCCTC 59.308 50.000 0.00 0.00 38.50 3.71
2806 3263 2.100418 GCTCCTGCCTGAATTTCCATTC 59.900 50.000 0.00 0.00 39.58 2.67
2832 3289 4.744570 TGAACTCGAACGCTTAGAATCAT 58.255 39.130 0.00 0.00 0.00 2.45
2848 3305 2.783135 TCATCTTTGTGGCCTGAACTC 58.217 47.619 3.32 0.00 0.00 3.01
2850 3307 2.165030 CCATCATCTTTGTGGCCTGAAC 59.835 50.000 3.32 0.00 0.00 3.18
2854 3311 0.032813 CCCCATCATCTTTGTGGCCT 60.033 55.000 3.32 0.00 0.00 5.19
2855 3312 0.033208 TCCCCATCATCTTTGTGGCC 60.033 55.000 0.00 0.00 0.00 5.36
2857 3314 3.220110 CAGATCCCCATCATCTTTGTGG 58.780 50.000 0.00 0.00 0.00 4.17
2938 3395 4.442706 ACACACTTCTTACACCAACAGAG 58.557 43.478 0.00 0.00 0.00 3.35
3079 3536 6.407525 GCAAATCCTCAGGTTCTGTAGATACT 60.408 42.308 0.00 0.00 32.61 2.12
3088 3545 3.575687 CCTTTTGCAAATCCTCAGGTTCT 59.424 43.478 13.65 0.00 0.00 3.01
3115 3572 5.068460 CAGAGACATTGGAGAACTAGTAGGG 59.932 48.000 0.00 0.00 0.00 3.53
3567 4027 7.843490 TCTGTATTAGTGAAAGAAAATCGGG 57.157 36.000 0.00 0.00 0.00 5.14
3581 4041 8.942338 TTCGCAGAAAACATATCTGTATTAGT 57.058 30.769 5.54 0.00 45.90 2.24
3610 4070 9.798994 CATATCTGCAAAAGAAGATTAGCTTTT 57.201 29.630 0.00 0.00 43.07 2.27
3678 4138 5.599656 AGCATACAAGGTGCCATCATTTAAT 59.400 36.000 0.00 0.00 43.50 1.40
3753 4213 3.503748 GCAAGCTGGTTACAGTCTCAATT 59.496 43.478 0.00 0.00 46.62 2.32
3816 4276 5.362105 ACACCAACACAAGGAAGTAGTTA 57.638 39.130 0.00 0.00 0.00 2.24
3911 4375 0.413434 AAAAGAGGGTTGGGGATGGG 59.587 55.000 0.00 0.00 0.00 4.00
3936 4400 9.871238 TGAAGAACAGTTACAGAATATTAGTCC 57.129 33.333 0.00 0.00 0.00 3.85
4038 4503 1.246649 GTGACACCACCATGATGCAA 58.753 50.000 0.00 0.00 37.33 4.08
4267 4748 6.369005 CAGAGCAGAATTTGACAAGTTACAG 58.631 40.000 0.00 0.00 0.00 2.74
4724 5515 9.345517 GTGCCATTTTTATATATGTATGTGCAG 57.654 33.333 0.00 0.00 0.00 4.41
4818 5609 3.961849 AGGAAAAGGGAAAGCAGATCTC 58.038 45.455 0.00 0.00 0.00 2.75
4923 5857 3.120304 TCTCGTCACAGTCATAGTCGTTG 60.120 47.826 0.00 0.00 0.00 4.10
4941 5875 0.039617 GCGTCATCCTCTCCATCTCG 60.040 60.000 0.00 0.00 0.00 4.04
5004 5938 2.927477 CGTTCTTACTAGCGGCATTTCA 59.073 45.455 1.45 0.00 0.00 2.69
5009 5943 0.174845 ATGCGTTCTTACTAGCGGCA 59.825 50.000 1.45 0.00 0.00 5.69
5057 6062 0.697079 AGATATCTGGGGCAGCATGG 59.303 55.000 3.89 0.00 35.86 3.66
5123 6134 1.381327 TGTCTCATCGTCCCCCTCC 60.381 63.158 0.00 0.00 0.00 4.30
5135 6146 1.191489 TCGCCCATTGGACTGTCTCA 61.191 55.000 3.62 1.44 0.00 3.27
5141 6152 2.990479 GACCTCGCCCATTGGACT 59.010 61.111 3.62 0.00 0.00 3.85
5228 6239 3.630013 AGCAGCGCCAGGTTCAGA 61.630 61.111 2.29 0.00 0.00 3.27
5257 6268 1.979693 GACAGCGTGTCCTCCTCCT 60.980 63.158 6.82 0.00 41.37 3.69
5258 6269 2.574399 GACAGCGTGTCCTCCTCC 59.426 66.667 6.82 0.00 41.37 4.30
5259 6270 2.179517 CGACAGCGTGTCCTCCTC 59.820 66.667 11.01 0.00 44.20 3.71
5515 6573 0.388659 GCATCAGACATCTCTCGCCT 59.611 55.000 0.00 0.00 0.00 5.52
5518 6576 2.858941 CAACAGCATCAGACATCTCTCG 59.141 50.000 0.00 0.00 0.00 4.04
5666 6731 2.832643 TTCCAATCCTGATGCACCAT 57.167 45.000 0.00 0.00 0.00 3.55
5677 6742 5.009410 AGAGCAATCGATTTCATTCCAATCC 59.991 40.000 8.21 0.00 0.00 3.01
5791 6860 4.041567 ACTTCAGTGTCAGAGAGAGAGAGA 59.958 45.833 0.00 0.00 0.00 3.10
5793 6862 4.041567 AGACTTCAGTGTCAGAGAGAGAGA 59.958 45.833 0.00 0.00 39.27 3.10
5794 6863 4.154737 CAGACTTCAGTGTCAGAGAGAGAG 59.845 50.000 0.00 0.00 39.27 3.20
5999 7243 1.077930 CTGCTCTGGTGTCCCCATG 60.078 63.158 0.00 0.00 44.15 3.66
6001 7245 1.229625 ATCTGCTCTGGTGTCCCCA 60.230 57.895 0.00 0.00 42.51 4.96
6092 7415 1.252904 GCCCACATCACATTGGCTGT 61.253 55.000 0.00 0.00 39.05 4.40
6093 7416 1.252215 TGCCCACATCACATTGGCTG 61.252 55.000 0.00 0.00 42.62 4.85
6094 7417 1.077086 TGCCCACATCACATTGGCT 59.923 52.632 0.00 0.00 42.62 4.75
6095 7418 1.216178 GTGCCCACATCACATTGGC 59.784 57.895 0.00 0.00 42.49 4.52
6097 7420 1.200716 GTCAGTGCCCACATCACATTG 59.799 52.381 0.82 0.00 36.93 2.82
6098 7421 1.538047 GTCAGTGCCCACATCACATT 58.462 50.000 0.82 0.00 36.93 2.71
6099 7422 0.674581 CGTCAGTGCCCACATCACAT 60.675 55.000 0.82 0.00 36.93 3.21
6100 7423 1.301637 CGTCAGTGCCCACATCACA 60.302 57.895 0.82 0.00 36.93 3.58
6101 7424 2.034879 CCGTCAGTGCCCACATCAC 61.035 63.158 0.82 0.00 34.80 3.06
6102 7425 2.347114 CCGTCAGTGCCCACATCA 59.653 61.111 0.82 0.00 0.00 3.07
6103 7426 3.127533 GCCGTCAGTGCCCACATC 61.128 66.667 0.82 0.00 0.00 3.06
6104 7427 2.769652 AATGCCGTCAGTGCCCACAT 62.770 55.000 0.82 0.00 0.00 3.21
6105 7428 3.490031 AATGCCGTCAGTGCCCACA 62.490 57.895 0.82 0.00 0.00 4.17
6106 7429 2.672996 AATGCCGTCAGTGCCCAC 60.673 61.111 0.00 0.00 0.00 4.61
6165 7488 3.435186 GACCAGAAAGCAGCGGGC 61.435 66.667 0.00 0.00 45.30 6.13
6167 7490 2.747855 GGGACCAGAAAGCAGCGG 60.748 66.667 0.00 0.00 0.00 5.52
6209 7532 1.269361 ACACATACACACGAGCAACGA 60.269 47.619 10.05 0.00 45.77 3.85
6256 7581 1.294138 CGCGTGGGGGTTTTCTCTA 59.706 57.895 0.00 0.00 0.00 2.43
6259 7584 2.190841 CAACGCGTGGGGGTTTTCT 61.191 57.895 14.98 0.00 45.91 2.52
6273 7598 0.810031 AATCGATTCCGGGAGCAACG 60.810 55.000 4.39 0.00 36.24 4.10
6275 7600 1.095228 GCAATCGATTCCGGGAGCAA 61.095 55.000 7.92 0.00 36.24 3.91
6277 7602 1.095228 TTGCAATCGATTCCGGGAGC 61.095 55.000 7.92 8.27 36.24 4.70
6278 7603 1.265095 CATTGCAATCGATTCCGGGAG 59.735 52.381 9.53 0.00 36.24 4.30
6281 7606 4.488126 AATACATTGCAATCGATTCCGG 57.512 40.909 9.53 0.00 36.24 5.14
6282 7607 5.509771 TGAAATACATTGCAATCGATTCCG 58.490 37.500 9.53 0.00 37.07 4.30
6284 7609 7.164826 GTCACTGAAATACATTGCAATCGATTC 59.835 37.037 9.53 11.89 0.00 2.52
6285 7610 6.968904 GTCACTGAAATACATTGCAATCGATT 59.031 34.615 9.53 4.39 0.00 3.34
6286 7611 6.317140 AGTCACTGAAATACATTGCAATCGAT 59.683 34.615 9.53 2.74 0.00 3.59
6287 7612 5.643348 AGTCACTGAAATACATTGCAATCGA 59.357 36.000 9.53 0.02 0.00 3.59
6288 7613 5.872635 AGTCACTGAAATACATTGCAATCG 58.127 37.500 9.53 8.06 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.