Multiple sequence alignment - TraesCS4A01G350600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G350600 chr4A 100.000 2549 0 0 1 2549 626934817 626932269 0.000000e+00 4708.0
1 TraesCS4A01G350600 chr6A 97.029 1986 53 5 568 2549 200078195 200080178 0.000000e+00 3336.0
2 TraesCS4A01G350600 chr6A 97.455 275 6 1 161 435 574265189 574265462 3.840000e-128 468.0
3 TraesCS4A01G350600 chr6A 96.774 279 9 0 159 437 542791836 542792114 1.380000e-127 466.0
4 TraesCS4A01G350600 chr7A 97.025 1983 51 6 572 2549 689996369 689994390 0.000000e+00 3328.0
5 TraesCS4A01G350600 chr7A 96.727 1986 59 4 568 2549 150203042 150201059 0.000000e+00 3302.0
6 TraesCS4A01G350600 chr7A 98.208 279 5 0 159 437 188896745 188896467 2.950000e-134 488.0
7 TraesCS4A01G350600 chr7A 96.774 279 9 0 159 437 118092815 118093093 1.380000e-127 466.0
8 TraesCS4A01G350600 chr5A 96.474 1985 62 5 572 2549 14186781 14184798 0.000000e+00 3271.0
9 TraesCS4A01G350600 chr5A 96.470 1983 63 6 570 2549 90997656 90999634 0.000000e+00 3267.0
10 TraesCS4A01G350600 chr5A 96.123 1986 67 6 570 2549 91049245 91051226 0.000000e+00 3232.0
11 TraesCS4A01G350600 chr5A 96.774 279 9 0 159 437 408534416 408534694 1.380000e-127 466.0
12 TraesCS4A01G350600 chr5A 96.774 279 9 0 159 437 574986948 574986670 1.380000e-127 466.0
13 TraesCS4A01G350600 chr3A 96.367 1982 64 7 572 2549 617401023 617403000 0.000000e+00 3254.0
14 TraesCS4A01G350600 chr3A 96.117 1983 69 5 571 2549 735555340 735557318 0.000000e+00 3229.0
15 TraesCS4A01G350600 chr3A 96.774 279 9 0 159 437 728960453 728960731 1.380000e-127 466.0
16 TraesCS4A01G350600 chr6B 96.266 1982 67 5 572 2549 660437743 660435765 0.000000e+00 3243.0
17 TraesCS4A01G350600 chr5B 97.091 275 8 0 161 435 403876060 403875786 4.970000e-127 464.0
18 TraesCS4A01G350600 chr1A 96.429 280 10 0 159 438 460283665 460283386 1.790000e-126 462.0
19 TraesCS4A01G350600 chr7B 92.135 89 7 0 440 528 316437982 316438070 2.660000e-25 126.0
20 TraesCS4A01G350600 chr4B 80.508 118 20 3 436 552 20686836 20686951 1.260000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G350600 chr4A 626932269 626934817 2548 True 4708 4708 100.000 1 2549 1 chr4A.!!$R1 2548
1 TraesCS4A01G350600 chr6A 200078195 200080178 1983 False 3336 3336 97.029 568 2549 1 chr6A.!!$F1 1981
2 TraesCS4A01G350600 chr7A 689994390 689996369 1979 True 3328 3328 97.025 572 2549 1 chr7A.!!$R3 1977
3 TraesCS4A01G350600 chr7A 150201059 150203042 1983 True 3302 3302 96.727 568 2549 1 chr7A.!!$R1 1981
4 TraesCS4A01G350600 chr5A 14184798 14186781 1983 True 3271 3271 96.474 572 2549 1 chr5A.!!$R1 1977
5 TraesCS4A01G350600 chr5A 90997656 90999634 1978 False 3267 3267 96.470 570 2549 1 chr5A.!!$F1 1979
6 TraesCS4A01G350600 chr5A 91049245 91051226 1981 False 3232 3232 96.123 570 2549 1 chr5A.!!$F2 1979
7 TraesCS4A01G350600 chr3A 617401023 617403000 1977 False 3254 3254 96.367 572 2549 1 chr3A.!!$F1 1977
8 TraesCS4A01G350600 chr3A 735555340 735557318 1978 False 3229 3229 96.117 571 2549 1 chr3A.!!$F3 1978
9 TraesCS4A01G350600 chr6B 660435765 660437743 1978 True 3243 3243 96.266 572 2549 1 chr6B.!!$R1 1977

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 504 0.038744 CCAGTCCCAATCTGCCAAGT 59.961 55.0 0.0 0.0 0.0 3.16 F
507 508 0.322816 TCCCAATCTGCCAAGTGAGC 60.323 55.0 0.0 0.0 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1349 1357 0.456221 TTCTTCCGGAGCTCGTGATC 59.544 55.0 3.34 0.0 37.11 2.92 R
1761 1773 0.962356 ACGCTCTGAATTTGGCCCAG 60.962 55.0 0.00 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.801114 AAAAGCAAACAGGAGTTGGTC 57.199 42.857 0.00 0.00 38.17 4.02
31 32 2.435372 AAGCAAACAGGAGTTGGTCA 57.565 45.000 0.00 0.00 38.17 4.02
32 33 1.680338 AGCAAACAGGAGTTGGTCAC 58.320 50.000 0.00 0.00 38.17 3.67
33 34 1.212935 AGCAAACAGGAGTTGGTCACT 59.787 47.619 0.00 0.00 38.17 3.41
34 35 2.024414 GCAAACAGGAGTTGGTCACTT 58.976 47.619 0.00 0.00 38.17 3.16
35 36 3.118038 AGCAAACAGGAGTTGGTCACTTA 60.118 43.478 0.00 0.00 38.17 2.24
36 37 3.003378 GCAAACAGGAGTTGGTCACTTAC 59.997 47.826 0.00 0.00 38.17 2.34
37 38 4.196193 CAAACAGGAGTTGGTCACTTACA 58.804 43.478 0.00 0.00 38.17 2.41
38 39 3.470645 ACAGGAGTTGGTCACTTACAC 57.529 47.619 0.00 0.00 35.01 2.90
39 40 2.769663 ACAGGAGTTGGTCACTTACACA 59.230 45.455 0.00 0.00 35.01 3.72
40 41 3.199071 ACAGGAGTTGGTCACTTACACAA 59.801 43.478 0.00 0.00 35.01 3.33
41 42 4.196193 CAGGAGTTGGTCACTTACACAAA 58.804 43.478 0.00 0.00 35.01 2.83
42 43 4.638421 CAGGAGTTGGTCACTTACACAAAA 59.362 41.667 0.00 0.00 35.01 2.44
43 44 5.124776 CAGGAGTTGGTCACTTACACAAAAA 59.875 40.000 0.00 0.00 35.01 1.94
71 72 4.394729 GGAAGTACCCTGACACAAAATCA 58.605 43.478 0.00 0.00 0.00 2.57
72 73 4.455877 GGAAGTACCCTGACACAAAATCAG 59.544 45.833 0.00 0.00 42.79 2.90
73 74 3.412386 AGTACCCTGACACAAAATCAGC 58.588 45.455 0.00 0.00 41.97 4.26
74 75 2.363306 ACCCTGACACAAAATCAGCA 57.637 45.000 0.00 0.00 41.97 4.41
75 76 2.880443 ACCCTGACACAAAATCAGCAT 58.120 42.857 0.00 0.00 41.97 3.79
76 77 4.032960 ACCCTGACACAAAATCAGCATA 57.967 40.909 0.00 0.00 41.97 3.14
77 78 3.758554 ACCCTGACACAAAATCAGCATAC 59.241 43.478 0.00 0.00 41.97 2.39
78 79 3.758023 CCCTGACACAAAATCAGCATACA 59.242 43.478 0.00 0.00 41.97 2.29
79 80 4.400251 CCCTGACACAAAATCAGCATACAT 59.600 41.667 0.00 0.00 41.97 2.29
80 81 5.589855 CCCTGACACAAAATCAGCATACATA 59.410 40.000 0.00 0.00 41.97 2.29
81 82 6.095300 CCCTGACACAAAATCAGCATACATAA 59.905 38.462 0.00 0.00 41.97 1.90
82 83 7.362834 CCCTGACACAAAATCAGCATACATAAA 60.363 37.037 0.00 0.00 41.97 1.40
83 84 7.485913 CCTGACACAAAATCAGCATACATAAAC 59.514 37.037 0.00 0.00 41.97 2.01
84 85 7.020602 TGACACAAAATCAGCATACATAAACG 58.979 34.615 0.00 0.00 0.00 3.60
85 86 5.799936 ACACAAAATCAGCATACATAAACGC 59.200 36.000 0.00 0.00 0.00 4.84
86 87 6.029607 CACAAAATCAGCATACATAAACGCT 58.970 36.000 0.00 0.00 34.29 5.07
87 88 7.148323 ACACAAAATCAGCATACATAAACGCTA 60.148 33.333 0.00 0.00 32.29 4.26
88 89 7.696035 CACAAAATCAGCATACATAAACGCTAA 59.304 33.333 0.00 0.00 32.29 3.09
89 90 7.910162 ACAAAATCAGCATACATAAACGCTAAG 59.090 33.333 0.00 0.00 32.29 2.18
90 91 6.545504 AATCAGCATACATAAACGCTAAGG 57.454 37.500 0.00 0.00 32.29 2.69
91 92 3.807622 TCAGCATACATAAACGCTAAGGC 59.192 43.478 0.00 0.00 32.29 4.35
92 93 3.058914 CAGCATACATAAACGCTAAGGCC 60.059 47.826 0.00 0.00 32.29 5.19
93 94 2.875933 GCATACATAAACGCTAAGGCCA 59.124 45.455 5.01 0.00 34.44 5.36
94 95 3.303791 GCATACATAAACGCTAAGGCCAC 60.304 47.826 5.01 0.00 34.44 5.01
95 96 2.483014 ACATAAACGCTAAGGCCACA 57.517 45.000 5.01 0.00 34.44 4.17
96 97 2.081462 ACATAAACGCTAAGGCCACAC 58.919 47.619 5.01 0.00 34.44 3.82
97 98 1.400494 CATAAACGCTAAGGCCACACC 59.600 52.381 5.01 0.00 39.61 4.16
98 99 0.397187 TAAACGCTAAGGCCACACCA 59.603 50.000 5.01 0.00 43.14 4.17
99 100 0.466555 AAACGCTAAGGCCACACCAA 60.467 50.000 5.01 0.00 43.14 3.67
100 101 0.466555 AACGCTAAGGCCACACCAAA 60.467 50.000 5.01 0.00 43.14 3.28
101 102 0.466555 ACGCTAAGGCCACACCAAAA 60.467 50.000 5.01 0.00 43.14 2.44
102 103 0.039527 CGCTAAGGCCACACCAAAAC 60.040 55.000 5.01 0.00 43.14 2.43
103 104 1.036707 GCTAAGGCCACACCAAAACA 58.963 50.000 5.01 0.00 43.14 2.83
104 105 1.269569 GCTAAGGCCACACCAAAACAC 60.270 52.381 5.01 0.00 43.14 3.32
105 106 1.339929 CTAAGGCCACACCAAAACACC 59.660 52.381 5.01 0.00 43.14 4.16
106 107 0.616111 AAGGCCACACCAAAACACCA 60.616 50.000 5.01 0.00 43.14 4.17
107 108 0.616111 AGGCCACACCAAAACACCAA 60.616 50.000 5.01 0.00 43.14 3.67
108 109 0.461163 GGCCACACCAAAACACCAAC 60.461 55.000 0.00 0.00 38.86 3.77
109 110 0.247736 GCCACACCAAAACACCAACA 59.752 50.000 0.00 0.00 0.00 3.33
110 111 1.738700 GCCACACCAAAACACCAACAG 60.739 52.381 0.00 0.00 0.00 3.16
111 112 1.639280 CACACCAAAACACCAACAGC 58.361 50.000 0.00 0.00 0.00 4.40
112 113 1.204467 CACACCAAAACACCAACAGCT 59.796 47.619 0.00 0.00 0.00 4.24
113 114 2.425312 CACACCAAAACACCAACAGCTA 59.575 45.455 0.00 0.00 0.00 3.32
114 115 3.093057 ACACCAAAACACCAACAGCTAA 58.907 40.909 0.00 0.00 0.00 3.09
115 116 3.704061 ACACCAAAACACCAACAGCTAAT 59.296 39.130 0.00 0.00 0.00 1.73
116 117 4.161377 ACACCAAAACACCAACAGCTAATT 59.839 37.500 0.00 0.00 0.00 1.40
117 118 5.361285 ACACCAAAACACCAACAGCTAATTA 59.639 36.000 0.00 0.00 0.00 1.40
118 119 6.127310 ACACCAAAACACCAACAGCTAATTAA 60.127 34.615 0.00 0.00 0.00 1.40
119 120 6.420604 CACCAAAACACCAACAGCTAATTAAG 59.579 38.462 0.00 0.00 0.00 1.85
120 121 6.322712 ACCAAAACACCAACAGCTAATTAAGA 59.677 34.615 0.00 0.00 0.00 2.10
121 122 7.147811 ACCAAAACACCAACAGCTAATTAAGAA 60.148 33.333 0.00 0.00 0.00 2.52
122 123 7.708752 CCAAAACACCAACAGCTAATTAAGAAA 59.291 33.333 0.00 0.00 0.00 2.52
123 124 9.260002 CAAAACACCAACAGCTAATTAAGAAAT 57.740 29.630 0.00 0.00 0.00 2.17
124 125 9.830975 AAAACACCAACAGCTAATTAAGAAATT 57.169 25.926 0.00 0.00 38.80 1.82
125 126 9.830975 AAACACCAACAGCTAATTAAGAAATTT 57.169 25.926 0.00 0.00 36.67 1.82
126 127 8.816640 ACACCAACAGCTAATTAAGAAATTTG 57.183 30.769 0.00 0.00 36.67 2.32
127 128 8.637986 ACACCAACAGCTAATTAAGAAATTTGA 58.362 29.630 0.00 0.00 36.67 2.69
128 129 8.915654 CACCAACAGCTAATTAAGAAATTTGAC 58.084 33.333 0.00 0.00 36.67 3.18
129 130 8.088365 ACCAACAGCTAATTAAGAAATTTGACC 58.912 33.333 0.00 0.00 36.67 4.02
130 131 8.306761 CCAACAGCTAATTAAGAAATTTGACCT 58.693 33.333 0.00 0.00 36.67 3.85
134 135 9.956720 CAGCTAATTAAGAAATTTGACCTATGG 57.043 33.333 0.00 0.00 36.67 2.74
135 136 9.920946 AGCTAATTAAGAAATTTGACCTATGGA 57.079 29.630 0.00 0.00 36.67 3.41
139 140 5.921962 AAGAAATTTGACCTATGGAAGCC 57.078 39.130 0.00 0.00 0.00 4.35
140 141 5.198602 AGAAATTTGACCTATGGAAGCCT 57.801 39.130 0.00 0.00 0.00 4.58
141 142 6.327386 AGAAATTTGACCTATGGAAGCCTA 57.673 37.500 0.00 0.00 0.00 3.93
142 143 6.122964 AGAAATTTGACCTATGGAAGCCTAC 58.877 40.000 0.00 0.00 0.00 3.18
143 144 5.450818 AATTTGACCTATGGAAGCCTACA 57.549 39.130 0.00 0.00 0.00 2.74
144 145 4.919774 TTTGACCTATGGAAGCCTACAA 57.080 40.909 0.00 0.00 0.00 2.41
145 146 3.906720 TGACCTATGGAAGCCTACAAC 57.093 47.619 0.00 0.00 0.00 3.32
146 147 2.504175 TGACCTATGGAAGCCTACAACC 59.496 50.000 0.00 0.00 0.00 3.77
147 148 2.504175 GACCTATGGAAGCCTACAACCA 59.496 50.000 0.00 0.00 36.83 3.67
148 149 2.238898 ACCTATGGAAGCCTACAACCAC 59.761 50.000 0.00 0.00 35.19 4.16
149 150 2.238646 CCTATGGAAGCCTACAACCACA 59.761 50.000 0.00 0.00 35.19 4.17
150 151 2.200373 ATGGAAGCCTACAACCACAC 57.800 50.000 0.00 0.00 35.19 3.82
151 152 0.840617 TGGAAGCCTACAACCACACA 59.159 50.000 0.00 0.00 0.00 3.72
152 153 1.213182 TGGAAGCCTACAACCACACAA 59.787 47.619 0.00 0.00 0.00 3.33
153 154 1.880027 GGAAGCCTACAACCACACAAG 59.120 52.381 0.00 0.00 0.00 3.16
154 155 2.486548 GGAAGCCTACAACCACACAAGA 60.487 50.000 0.00 0.00 0.00 3.02
155 156 3.412386 GAAGCCTACAACCACACAAGAT 58.588 45.455 0.00 0.00 0.00 2.40
156 157 3.508845 AGCCTACAACCACACAAGATT 57.491 42.857 0.00 0.00 0.00 2.40
157 158 3.832527 AGCCTACAACCACACAAGATTT 58.167 40.909 0.00 0.00 0.00 2.17
158 159 4.215109 AGCCTACAACCACACAAGATTTT 58.785 39.130 0.00 0.00 0.00 1.82
159 160 4.649218 AGCCTACAACCACACAAGATTTTT 59.351 37.500 0.00 0.00 0.00 1.94
160 161 5.830991 AGCCTACAACCACACAAGATTTTTA 59.169 36.000 0.00 0.00 0.00 1.52
161 162 6.016276 AGCCTACAACCACACAAGATTTTTAG 60.016 38.462 0.00 0.00 0.00 1.85
162 163 6.677913 CCTACAACCACACAAGATTTTTAGG 58.322 40.000 0.00 0.00 0.00 2.69
163 164 4.944048 ACAACCACACAAGATTTTTAGGC 58.056 39.130 0.00 0.00 0.00 3.93
164 165 4.649218 ACAACCACACAAGATTTTTAGGCT 59.351 37.500 0.00 0.00 0.00 4.58
165 166 4.853924 ACCACACAAGATTTTTAGGCTG 57.146 40.909 0.00 0.00 0.00 4.85
166 167 3.573967 ACCACACAAGATTTTTAGGCTGG 59.426 43.478 0.00 0.00 0.00 4.85
167 168 3.573967 CCACACAAGATTTTTAGGCTGGT 59.426 43.478 0.00 0.00 0.00 4.00
168 169 4.321230 CCACACAAGATTTTTAGGCTGGTC 60.321 45.833 0.00 0.00 0.00 4.02
169 170 4.278170 CACACAAGATTTTTAGGCTGGTCA 59.722 41.667 0.00 0.00 0.00 4.02
170 171 5.047802 CACACAAGATTTTTAGGCTGGTCAT 60.048 40.000 0.00 0.00 0.00 3.06
171 172 6.150976 CACACAAGATTTTTAGGCTGGTCATA 59.849 38.462 0.00 0.00 0.00 2.15
172 173 6.375455 ACACAAGATTTTTAGGCTGGTCATAG 59.625 38.462 0.00 0.00 0.00 2.23
173 174 6.375455 CACAAGATTTTTAGGCTGGTCATAGT 59.625 38.462 0.00 0.00 0.00 2.12
174 175 6.375455 ACAAGATTTTTAGGCTGGTCATAGTG 59.625 38.462 0.00 0.00 0.00 2.74
175 176 5.440610 AGATTTTTAGGCTGGTCATAGTGG 58.559 41.667 0.00 0.00 0.00 4.00
176 177 3.644966 TTTTAGGCTGGTCATAGTGGG 57.355 47.619 0.00 0.00 0.00 4.61
177 178 2.561209 TTAGGCTGGTCATAGTGGGA 57.439 50.000 0.00 0.00 0.00 4.37
178 179 2.088104 TAGGCTGGTCATAGTGGGAG 57.912 55.000 0.00 0.00 0.00 4.30
179 180 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
180 181 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
181 182 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
182 183 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
183 184 2.766828 GCTGGTCATAGTGGGAGTAACT 59.233 50.000 0.00 0.00 0.00 2.24
184 185 3.197983 GCTGGTCATAGTGGGAGTAACTT 59.802 47.826 0.00 0.00 0.00 2.66
185 186 4.404715 GCTGGTCATAGTGGGAGTAACTTA 59.595 45.833 0.00 0.00 0.00 2.24
186 187 5.452077 GCTGGTCATAGTGGGAGTAACTTAG 60.452 48.000 0.00 0.00 0.00 2.18
187 188 4.404715 TGGTCATAGTGGGAGTAACTTAGC 59.595 45.833 0.00 0.00 0.00 3.09
188 189 4.404715 GGTCATAGTGGGAGTAACTTAGCA 59.595 45.833 0.00 0.00 0.00 3.49
189 190 5.105064 GGTCATAGTGGGAGTAACTTAGCAA 60.105 44.000 0.00 0.00 0.00 3.91
190 191 6.043411 GTCATAGTGGGAGTAACTTAGCAAG 58.957 44.000 0.00 0.00 0.00 4.01
191 192 5.720041 TCATAGTGGGAGTAACTTAGCAAGT 59.280 40.000 0.00 0.00 45.46 3.16
192 193 6.893554 TCATAGTGGGAGTAACTTAGCAAGTA 59.106 38.462 2.60 0.00 41.91 2.24
193 194 7.398047 TCATAGTGGGAGTAACTTAGCAAGTAA 59.602 37.037 2.60 0.00 41.91 2.24
194 195 5.791666 AGTGGGAGTAACTTAGCAAGTAAC 58.208 41.667 2.60 0.00 41.91 2.50
195 196 5.306160 AGTGGGAGTAACTTAGCAAGTAACA 59.694 40.000 2.60 0.00 41.91 2.41
196 197 6.013639 AGTGGGAGTAACTTAGCAAGTAACAT 60.014 38.462 2.60 0.00 41.91 2.71
197 198 7.179694 AGTGGGAGTAACTTAGCAAGTAACATA 59.820 37.037 2.60 0.00 41.91 2.29
198 199 7.491696 GTGGGAGTAACTTAGCAAGTAACATAG 59.508 40.741 2.60 0.00 41.91 2.23
199 200 6.479331 GGGAGTAACTTAGCAAGTAACATAGC 59.521 42.308 2.60 0.00 41.91 2.97
200 201 6.198591 GGAGTAACTTAGCAAGTAACATAGCG 59.801 42.308 2.60 0.00 41.91 4.26
201 202 4.859629 AACTTAGCAAGTAACATAGCGC 57.140 40.909 0.00 0.00 41.91 5.92
202 203 3.857052 ACTTAGCAAGTAACATAGCGCA 58.143 40.909 11.47 0.00 40.69 6.09
203 204 4.442706 ACTTAGCAAGTAACATAGCGCAT 58.557 39.130 11.47 0.00 40.69 4.73
204 205 4.876107 ACTTAGCAAGTAACATAGCGCATT 59.124 37.500 11.47 0.20 40.69 3.56
205 206 3.951979 AGCAAGTAACATAGCGCATTC 57.048 42.857 11.47 0.00 0.00 2.67
206 207 2.614057 AGCAAGTAACATAGCGCATTCC 59.386 45.455 11.47 0.00 0.00 3.01
207 208 2.354510 GCAAGTAACATAGCGCATTCCA 59.645 45.455 11.47 0.00 0.00 3.53
208 209 3.181501 GCAAGTAACATAGCGCATTCCAA 60.182 43.478 11.47 0.00 0.00 3.53
209 210 4.591202 CAAGTAACATAGCGCATTCCAAG 58.409 43.478 11.47 0.00 0.00 3.61
210 211 4.137116 AGTAACATAGCGCATTCCAAGA 57.863 40.909 11.47 0.00 0.00 3.02
211 212 3.871594 AGTAACATAGCGCATTCCAAGAC 59.128 43.478 11.47 0.00 0.00 3.01
212 213 2.401583 ACATAGCGCATTCCAAGACA 57.598 45.000 11.47 0.00 0.00 3.41
213 214 2.710377 ACATAGCGCATTCCAAGACAA 58.290 42.857 11.47 0.00 0.00 3.18
214 215 2.679837 ACATAGCGCATTCCAAGACAAG 59.320 45.455 11.47 0.00 0.00 3.16
215 216 2.472695 TAGCGCATTCCAAGACAAGT 57.527 45.000 11.47 0.00 0.00 3.16
216 217 1.609208 AGCGCATTCCAAGACAAGTT 58.391 45.000 11.47 0.00 0.00 2.66
217 218 1.956477 AGCGCATTCCAAGACAAGTTT 59.044 42.857 11.47 0.00 0.00 2.66
218 219 2.053627 GCGCATTCCAAGACAAGTTTG 58.946 47.619 0.30 0.00 0.00 2.93
219 220 2.053627 CGCATTCCAAGACAAGTTTGC 58.946 47.619 0.00 0.00 0.00 3.68
220 221 2.287788 CGCATTCCAAGACAAGTTTGCT 60.288 45.455 0.00 0.00 0.00 3.91
221 222 3.721035 GCATTCCAAGACAAGTTTGCTT 58.279 40.909 0.00 0.00 34.82 3.91
222 223 4.556501 CGCATTCCAAGACAAGTTTGCTTA 60.557 41.667 0.00 0.00 32.87 3.09
223 224 5.473039 GCATTCCAAGACAAGTTTGCTTAT 58.527 37.500 0.00 0.00 32.87 1.73
224 225 5.346822 GCATTCCAAGACAAGTTTGCTTATG 59.653 40.000 0.00 0.00 32.87 1.90
225 226 6.449698 CATTCCAAGACAAGTTTGCTTATGT 58.550 36.000 0.00 0.00 32.87 2.29
226 227 5.437289 TCCAAGACAAGTTTGCTTATGTG 57.563 39.130 0.00 0.00 32.87 3.21
227 228 4.278170 TCCAAGACAAGTTTGCTTATGTGG 59.722 41.667 0.00 0.00 32.87 4.17
228 229 3.923017 AGACAAGTTTGCTTATGTGGC 57.077 42.857 0.00 0.00 32.87 5.01
229 230 3.221771 AGACAAGTTTGCTTATGTGGCA 58.778 40.909 0.00 0.00 37.97 4.92
230 231 3.828451 AGACAAGTTTGCTTATGTGGCAT 59.172 39.130 0.00 0.00 39.54 4.40
231 232 4.082571 AGACAAGTTTGCTTATGTGGCATC 60.083 41.667 0.00 0.00 39.54 3.91
232 233 3.828451 ACAAGTTTGCTTATGTGGCATCT 59.172 39.130 0.00 0.00 39.54 2.90
233 234 5.009631 ACAAGTTTGCTTATGTGGCATCTA 58.990 37.500 0.00 0.00 39.54 1.98
234 235 5.124457 ACAAGTTTGCTTATGTGGCATCTAG 59.876 40.000 0.00 0.00 39.54 2.43
235 236 4.848357 AGTTTGCTTATGTGGCATCTAGT 58.152 39.130 0.00 0.00 39.54 2.57
236 237 5.256474 AGTTTGCTTATGTGGCATCTAGTT 58.744 37.500 0.00 0.00 39.54 2.24
237 238 6.414732 AGTTTGCTTATGTGGCATCTAGTTA 58.585 36.000 0.00 0.00 39.54 2.24
238 239 6.884295 AGTTTGCTTATGTGGCATCTAGTTAA 59.116 34.615 0.00 0.00 39.54 2.01
239 240 7.557719 AGTTTGCTTATGTGGCATCTAGTTAAT 59.442 33.333 0.00 0.00 39.54 1.40
240 241 6.866010 TGCTTATGTGGCATCTAGTTAATG 57.134 37.500 0.00 0.00 34.56 1.90
241 242 6.591001 TGCTTATGTGGCATCTAGTTAATGA 58.409 36.000 0.00 0.00 34.56 2.57
242 243 6.707608 TGCTTATGTGGCATCTAGTTAATGAG 59.292 38.462 0.00 0.00 34.56 2.90
243 244 6.148480 GCTTATGTGGCATCTAGTTAATGAGG 59.852 42.308 0.00 0.00 0.00 3.86
244 245 5.894298 ATGTGGCATCTAGTTAATGAGGA 57.106 39.130 0.00 0.00 0.00 3.71
245 246 5.282055 TGTGGCATCTAGTTAATGAGGAG 57.718 43.478 0.00 0.00 0.00 3.69
246 247 4.962362 TGTGGCATCTAGTTAATGAGGAGA 59.038 41.667 0.00 0.00 0.00 3.71
247 248 5.069648 TGTGGCATCTAGTTAATGAGGAGAG 59.930 44.000 0.00 0.00 0.00 3.20
248 249 5.303078 GTGGCATCTAGTTAATGAGGAGAGA 59.697 44.000 0.00 0.00 0.00 3.10
249 250 6.014669 GTGGCATCTAGTTAATGAGGAGAGAT 60.015 42.308 0.00 0.00 0.00 2.75
250 251 6.014755 TGGCATCTAGTTAATGAGGAGAGATG 60.015 42.308 0.00 0.00 41.03 2.90
251 252 6.014669 GGCATCTAGTTAATGAGGAGAGATGT 60.015 42.308 9.89 0.00 40.48 3.06
252 253 6.867816 GCATCTAGTTAATGAGGAGAGATGTG 59.132 42.308 9.89 0.00 40.48 3.21
253 254 7.471260 GCATCTAGTTAATGAGGAGAGATGTGT 60.471 40.741 9.89 0.00 40.48 3.72
254 255 7.962995 TCTAGTTAATGAGGAGAGATGTGTT 57.037 36.000 0.00 0.00 0.00 3.32
255 256 8.367660 TCTAGTTAATGAGGAGAGATGTGTTT 57.632 34.615 0.00 0.00 0.00 2.83
256 257 8.253810 TCTAGTTAATGAGGAGAGATGTGTTTG 58.746 37.037 0.00 0.00 0.00 2.93
257 258 6.176183 AGTTAATGAGGAGAGATGTGTTTGG 58.824 40.000 0.00 0.00 0.00 3.28
258 259 4.916041 AATGAGGAGAGATGTGTTTGGA 57.084 40.909 0.00 0.00 0.00 3.53
259 260 3.969287 TGAGGAGAGATGTGTTTGGAG 57.031 47.619 0.00 0.00 0.00 3.86
260 261 3.242867 TGAGGAGAGATGTGTTTGGAGT 58.757 45.455 0.00 0.00 0.00 3.85
261 262 4.416516 TGAGGAGAGATGTGTTTGGAGTA 58.583 43.478 0.00 0.00 0.00 2.59
262 263 4.838423 TGAGGAGAGATGTGTTTGGAGTAA 59.162 41.667 0.00 0.00 0.00 2.24
263 264 5.153950 AGGAGAGATGTGTTTGGAGTAAC 57.846 43.478 0.00 0.00 0.00 2.50
264 265 4.593206 AGGAGAGATGTGTTTGGAGTAACA 59.407 41.667 0.00 0.00 35.75 2.41
265 266 5.249393 AGGAGAGATGTGTTTGGAGTAACAT 59.751 40.000 0.00 0.00 39.93 2.71
266 267 6.440647 AGGAGAGATGTGTTTGGAGTAACATA 59.559 38.462 0.00 0.00 39.93 2.29
267 268 7.038302 AGGAGAGATGTGTTTGGAGTAACATAA 60.038 37.037 0.00 0.00 39.93 1.90
268 269 7.770897 GGAGAGATGTGTTTGGAGTAACATAAT 59.229 37.037 0.00 0.00 39.93 1.28
269 270 9.817809 GAGAGATGTGTTTGGAGTAACATAATA 57.182 33.333 0.00 0.00 39.93 0.98
293 294 5.988092 TGTTACTGTAACATAACGCAAACC 58.012 37.500 25.14 0.13 43.23 3.27
294 295 5.526479 TGTTACTGTAACATAACGCAAACCA 59.474 36.000 25.14 2.58 43.23 3.67
295 296 6.037940 TGTTACTGTAACATAACGCAAACCAA 59.962 34.615 25.14 2.12 43.23 3.67
296 297 5.502153 ACTGTAACATAACGCAAACCAAA 57.498 34.783 0.00 0.00 0.00 3.28
297 298 5.516090 ACTGTAACATAACGCAAACCAAAG 58.484 37.500 0.00 0.00 0.00 2.77
298 299 4.291783 TGTAACATAACGCAAACCAAAGC 58.708 39.130 0.00 0.00 0.00 3.51
299 300 3.444703 AACATAACGCAAACCAAAGCA 57.555 38.095 0.00 0.00 0.00 3.91
300 301 3.444703 ACATAACGCAAACCAAAGCAA 57.555 38.095 0.00 0.00 0.00 3.91
301 302 3.786635 ACATAACGCAAACCAAAGCAAA 58.213 36.364 0.00 0.00 0.00 3.68
302 303 4.184629 ACATAACGCAAACCAAAGCAAAA 58.815 34.783 0.00 0.00 0.00 2.44
303 304 4.813697 ACATAACGCAAACCAAAGCAAAAT 59.186 33.333 0.00 0.00 0.00 1.82
304 305 3.672028 AACGCAAACCAAAGCAAAATG 57.328 38.095 0.00 0.00 0.00 2.32
305 306 2.898705 ACGCAAACCAAAGCAAAATGA 58.101 38.095 0.00 0.00 0.00 2.57
306 307 2.865551 ACGCAAACCAAAGCAAAATGAG 59.134 40.909 0.00 0.00 0.00 2.90
307 308 2.865551 CGCAAACCAAAGCAAAATGAGT 59.134 40.909 0.00 0.00 0.00 3.41
308 309 3.060339 CGCAAACCAAAGCAAAATGAGTC 60.060 43.478 0.00 0.00 0.00 3.36
309 310 4.122046 GCAAACCAAAGCAAAATGAGTCT 58.878 39.130 0.00 0.00 0.00 3.24
310 311 5.288804 GCAAACCAAAGCAAAATGAGTCTA 58.711 37.500 0.00 0.00 0.00 2.59
311 312 5.928264 GCAAACCAAAGCAAAATGAGTCTAT 59.072 36.000 0.00 0.00 0.00 1.98
312 313 7.090173 GCAAACCAAAGCAAAATGAGTCTATA 58.910 34.615 0.00 0.00 0.00 1.31
313 314 7.598493 GCAAACCAAAGCAAAATGAGTCTATAA 59.402 33.333 0.00 0.00 0.00 0.98
314 315 9.643693 CAAACCAAAGCAAAATGAGTCTATAAT 57.356 29.630 0.00 0.00 0.00 1.28
315 316 9.643693 AAACCAAAGCAAAATGAGTCTATAATG 57.356 29.630 0.00 0.00 0.00 1.90
316 317 8.353423 ACCAAAGCAAAATGAGTCTATAATGT 57.647 30.769 0.00 0.00 0.00 2.71
317 318 9.461312 ACCAAAGCAAAATGAGTCTATAATGTA 57.539 29.630 0.00 0.00 0.00 2.29
360 361 9.884636 ATGATACTACTTGTATGTTACTTTGCA 57.115 29.630 0.00 0.00 41.55 4.08
361 362 9.146984 TGATACTACTTGTATGTTACTTTGCAC 57.853 33.333 0.00 0.00 41.55 4.57
362 363 9.367444 GATACTACTTGTATGTTACTTTGCACT 57.633 33.333 0.00 0.00 41.55 4.40
365 366 9.151471 ACTACTTGTATGTTACTTTGCACTATG 57.849 33.333 0.00 0.00 0.00 2.23
366 367 9.366216 CTACTTGTATGTTACTTTGCACTATGA 57.634 33.333 0.00 0.00 0.00 2.15
367 368 8.615878 ACTTGTATGTTACTTTGCACTATGAA 57.384 30.769 0.00 0.00 0.00 2.57
368 369 8.721478 ACTTGTATGTTACTTTGCACTATGAAG 58.279 33.333 0.00 0.00 0.00 3.02
369 370 7.609760 TGTATGTTACTTTGCACTATGAAGG 57.390 36.000 0.00 0.00 0.00 3.46
370 371 7.165485 TGTATGTTACTTTGCACTATGAAGGT 58.835 34.615 0.00 0.00 0.00 3.50
371 372 8.315482 TGTATGTTACTTTGCACTATGAAGGTA 58.685 33.333 0.00 0.00 0.00 3.08
372 373 7.849804 ATGTTACTTTGCACTATGAAGGTAG 57.150 36.000 0.00 0.00 0.00 3.18
373 374 6.765403 TGTTACTTTGCACTATGAAGGTAGT 58.235 36.000 0.00 0.00 35.34 2.73
374 375 7.898918 TGTTACTTTGCACTATGAAGGTAGTA 58.101 34.615 0.00 0.00 33.29 1.82
375 376 8.369424 TGTTACTTTGCACTATGAAGGTAGTAA 58.631 33.333 0.00 0.00 33.29 2.24
376 377 8.654215 GTTACTTTGCACTATGAAGGTAGTAAC 58.346 37.037 0.00 0.00 38.55 2.50
377 378 6.765403 ACTTTGCACTATGAAGGTAGTAACA 58.235 36.000 0.00 0.00 33.29 2.41
378 379 7.221450 ACTTTGCACTATGAAGGTAGTAACAA 58.779 34.615 0.00 0.00 33.29 2.83
379 380 7.717875 ACTTTGCACTATGAAGGTAGTAACAAA 59.282 33.333 0.00 11.00 37.46 2.83
380 381 7.667043 TTGCACTATGAAGGTAGTAACAAAG 57.333 36.000 0.00 0.00 33.29 2.77
381 382 6.999950 TGCACTATGAAGGTAGTAACAAAGA 58.000 36.000 0.00 0.00 33.29 2.52
382 383 6.872020 TGCACTATGAAGGTAGTAACAAAGAC 59.128 38.462 0.00 0.00 33.29 3.01
383 384 7.097834 GCACTATGAAGGTAGTAACAAAGACT 58.902 38.462 0.00 0.00 33.29 3.24
384 385 8.248945 GCACTATGAAGGTAGTAACAAAGACTA 58.751 37.037 0.00 0.00 33.29 2.59
385 386 9.790389 CACTATGAAGGTAGTAACAAAGACTAG 57.210 37.037 0.00 0.00 33.29 2.57
386 387 9.531158 ACTATGAAGGTAGTAACAAAGACTAGT 57.469 33.333 0.00 0.00 33.29 2.57
387 388 9.790389 CTATGAAGGTAGTAACAAAGACTAGTG 57.210 37.037 0.00 0.00 30.08 2.74
388 389 7.592885 TGAAGGTAGTAACAAAGACTAGTGT 57.407 36.000 0.00 0.00 30.08 3.55
389 390 7.655490 TGAAGGTAGTAACAAAGACTAGTGTC 58.345 38.462 0.00 0.00 43.22 3.67
390 391 7.286087 TGAAGGTAGTAACAAAGACTAGTGTCA 59.714 37.037 0.00 0.00 45.20 3.58
391 392 7.778185 AGGTAGTAACAAAGACTAGTGTCAT 57.222 36.000 0.00 0.00 45.20 3.06
392 393 8.874744 AGGTAGTAACAAAGACTAGTGTCATA 57.125 34.615 0.00 0.00 45.20 2.15
393 394 9.476928 AGGTAGTAACAAAGACTAGTGTCATAT 57.523 33.333 0.00 0.00 45.20 1.78
394 395 9.517609 GGTAGTAACAAAGACTAGTGTCATATG 57.482 37.037 0.00 0.00 45.20 1.78
395 396 9.021863 GTAGTAACAAAGACTAGTGTCATATGC 57.978 37.037 0.00 0.00 45.20 3.14
396 397 7.611770 AGTAACAAAGACTAGTGTCATATGCA 58.388 34.615 0.00 0.00 45.20 3.96
397 398 8.260818 AGTAACAAAGACTAGTGTCATATGCAT 58.739 33.333 3.79 3.79 45.20 3.96
398 399 6.915544 ACAAAGACTAGTGTCATATGCATG 57.084 37.500 10.16 0.00 45.20 4.06
399 400 6.643388 ACAAAGACTAGTGTCATATGCATGA 58.357 36.000 10.16 0.00 45.20 3.07
417 418 8.879342 ATGCATGACACTAGTCTAAATTACTC 57.121 34.615 0.00 0.00 45.20 2.59
418 419 7.265673 TGCATGACACTAGTCTAAATTACTCC 58.734 38.462 0.00 0.00 45.20 3.85
419 420 6.702282 GCATGACACTAGTCTAAATTACTCCC 59.298 42.308 0.00 0.00 45.20 4.30
420 421 6.786967 TGACACTAGTCTAAATTACTCCCC 57.213 41.667 0.00 0.00 45.20 4.81
421 422 6.258354 TGACACTAGTCTAAATTACTCCCCA 58.742 40.000 0.00 0.00 45.20 4.96
422 423 6.154021 TGACACTAGTCTAAATTACTCCCCAC 59.846 42.308 0.00 0.00 45.20 4.61
423 424 6.262207 ACACTAGTCTAAATTACTCCCCACT 58.738 40.000 0.00 0.00 0.00 4.00
424 425 7.416731 ACACTAGTCTAAATTACTCCCCACTA 58.583 38.462 0.00 0.00 0.00 2.74
425 426 8.066247 ACACTAGTCTAAATTACTCCCCACTAT 58.934 37.037 0.00 0.00 0.00 2.12
426 427 8.361139 CACTAGTCTAAATTACTCCCCACTATG 58.639 40.741 0.00 0.00 0.00 2.23
427 428 8.287350 ACTAGTCTAAATTACTCCCCACTATGA 58.713 37.037 0.00 0.00 0.00 2.15
428 429 7.604657 AGTCTAAATTACTCCCCACTATGAG 57.395 40.000 0.00 0.00 34.73 2.90
429 430 6.042208 AGTCTAAATTACTCCCCACTATGAGC 59.958 42.308 0.00 0.00 31.65 4.26
430 431 5.903010 TCTAAATTACTCCCCACTATGAGCA 59.097 40.000 0.00 0.00 31.65 4.26
431 432 4.696479 AATTACTCCCCACTATGAGCAG 57.304 45.455 0.00 0.00 31.65 4.24
432 433 1.414158 TACTCCCCACTATGAGCAGC 58.586 55.000 0.00 0.00 31.65 5.25
433 434 1.341156 ACTCCCCACTATGAGCAGCC 61.341 60.000 0.00 0.00 31.65 4.85
434 435 1.003442 TCCCCACTATGAGCAGCCT 59.997 57.895 0.00 0.00 0.00 4.58
435 436 0.621571 TCCCCACTATGAGCAGCCTT 60.622 55.000 0.00 0.00 0.00 4.35
436 437 1.131638 CCCCACTATGAGCAGCCTTA 58.868 55.000 0.00 0.00 0.00 2.69
437 438 1.202698 CCCCACTATGAGCAGCCTTAC 60.203 57.143 0.00 0.00 0.00 2.34
438 439 1.486310 CCCACTATGAGCAGCCTTACA 59.514 52.381 0.00 0.00 0.00 2.41
439 440 2.555199 CCACTATGAGCAGCCTTACAC 58.445 52.381 0.00 0.00 0.00 2.90
440 441 2.555199 CACTATGAGCAGCCTTACACC 58.445 52.381 0.00 0.00 0.00 4.16
441 442 1.486726 ACTATGAGCAGCCTTACACCC 59.513 52.381 0.00 0.00 0.00 4.61
442 443 1.486310 CTATGAGCAGCCTTACACCCA 59.514 52.381 0.00 0.00 0.00 4.51
443 444 0.254178 ATGAGCAGCCTTACACCCAG 59.746 55.000 0.00 0.00 0.00 4.45
444 445 1.746991 GAGCAGCCTTACACCCAGC 60.747 63.158 0.00 0.00 0.00 4.85
445 446 2.751837 GCAGCCTTACACCCAGCC 60.752 66.667 0.00 0.00 0.00 4.85
446 447 3.081554 CAGCCTTACACCCAGCCT 58.918 61.111 0.00 0.00 0.00 4.58
447 448 1.078143 CAGCCTTACACCCAGCCTC 60.078 63.158 0.00 0.00 0.00 4.70
448 449 2.272471 GCCTTACACCCAGCCTCC 59.728 66.667 0.00 0.00 0.00 4.30
449 450 2.998949 CCTTACACCCAGCCTCCC 59.001 66.667 0.00 0.00 0.00 4.30
450 451 1.923395 CCTTACACCCAGCCTCCCA 60.923 63.158 0.00 0.00 0.00 4.37
451 452 1.497309 CCTTACACCCAGCCTCCCAA 61.497 60.000 0.00 0.00 0.00 4.12
452 453 0.404040 CTTACACCCAGCCTCCCAAA 59.596 55.000 0.00 0.00 0.00 3.28
453 454 0.111639 TTACACCCAGCCTCCCAAAC 59.888 55.000 0.00 0.00 0.00 2.93
454 455 1.785353 TACACCCAGCCTCCCAAACC 61.785 60.000 0.00 0.00 0.00 3.27
455 456 2.780924 ACCCAGCCTCCCAAACCA 60.781 61.111 0.00 0.00 0.00 3.67
456 457 2.399607 ACCCAGCCTCCCAAACCAA 61.400 57.895 0.00 0.00 0.00 3.67
457 458 1.079073 CCCAGCCTCCCAAACCAAT 59.921 57.895 0.00 0.00 0.00 3.16
458 459 1.259840 CCCAGCCTCCCAAACCAATG 61.260 60.000 0.00 0.00 0.00 2.82
459 460 1.593265 CAGCCTCCCAAACCAATGC 59.407 57.895 0.00 0.00 0.00 3.56
460 461 1.155859 AGCCTCCCAAACCAATGCA 59.844 52.632 0.00 0.00 0.00 3.96
461 462 1.187567 AGCCTCCCAAACCAATGCAC 61.188 55.000 0.00 0.00 0.00 4.57
462 463 1.586028 CCTCCCAAACCAATGCACG 59.414 57.895 0.00 0.00 0.00 5.34
463 464 1.178534 CCTCCCAAACCAATGCACGT 61.179 55.000 0.00 0.00 0.00 4.49
464 465 0.039256 CTCCCAAACCAATGCACGTG 60.039 55.000 12.28 12.28 0.00 4.49
465 466 0.753479 TCCCAAACCAATGCACGTGT 60.753 50.000 18.38 0.00 0.00 4.49
466 467 0.318614 CCCAAACCAATGCACGTGTC 60.319 55.000 18.38 10.14 0.00 3.67
467 468 0.318614 CCAAACCAATGCACGTGTCC 60.319 55.000 18.38 1.32 0.00 4.02
468 469 0.383590 CAAACCAATGCACGTGTCCA 59.616 50.000 18.38 7.94 0.00 4.02
469 470 1.000385 CAAACCAATGCACGTGTCCAT 60.000 47.619 18.38 10.11 0.00 3.41
470 471 2.192664 AACCAATGCACGTGTCCATA 57.807 45.000 18.38 0.00 0.00 2.74
471 472 1.448985 ACCAATGCACGTGTCCATAC 58.551 50.000 18.38 0.00 0.00 2.39
472 473 1.003118 ACCAATGCACGTGTCCATACT 59.997 47.619 18.38 0.00 0.00 2.12
473 474 2.083774 CCAATGCACGTGTCCATACTT 58.916 47.619 18.38 0.00 0.00 2.24
474 475 2.095853 CCAATGCACGTGTCCATACTTC 59.904 50.000 18.38 0.00 0.00 3.01
475 476 2.741517 CAATGCACGTGTCCATACTTCA 59.258 45.455 18.38 3.17 0.00 3.02
476 477 2.760634 TGCACGTGTCCATACTTCAT 57.239 45.000 18.38 0.00 0.00 2.57
477 478 3.878160 TGCACGTGTCCATACTTCATA 57.122 42.857 18.38 0.00 0.00 2.15
478 479 3.780902 TGCACGTGTCCATACTTCATAG 58.219 45.455 18.38 0.00 0.00 2.23
479 480 3.123804 GCACGTGTCCATACTTCATAGG 58.876 50.000 18.38 0.00 0.00 2.57
480 481 3.123804 CACGTGTCCATACTTCATAGGC 58.876 50.000 7.58 0.00 0.00 3.93
481 482 2.102588 ACGTGTCCATACTTCATAGGCC 59.897 50.000 0.00 0.00 0.00 5.19
482 483 2.548067 CGTGTCCATACTTCATAGGCCC 60.548 54.545 0.00 0.00 0.00 5.80
483 484 2.054799 TGTCCATACTTCATAGGCCCC 58.945 52.381 0.00 0.00 0.00 5.80
484 485 1.351350 GTCCATACTTCATAGGCCCCC 59.649 57.143 0.00 0.00 0.00 5.40
498 499 2.276740 CCCCCAGTCCCAATCTGC 59.723 66.667 0.00 0.00 0.00 4.26
499 500 2.276740 CCCCAGTCCCAATCTGCC 59.723 66.667 0.00 0.00 0.00 4.85
500 501 2.615465 CCCCAGTCCCAATCTGCCA 61.615 63.158 0.00 0.00 0.00 4.92
501 502 1.383799 CCCAGTCCCAATCTGCCAA 59.616 57.895 0.00 0.00 0.00 4.52
502 503 0.682209 CCCAGTCCCAATCTGCCAAG 60.682 60.000 0.00 0.00 0.00 3.61
503 504 0.038744 CCAGTCCCAATCTGCCAAGT 59.961 55.000 0.00 0.00 0.00 3.16
504 505 1.171308 CAGTCCCAATCTGCCAAGTG 58.829 55.000 0.00 0.00 0.00 3.16
505 506 1.067295 AGTCCCAATCTGCCAAGTGA 58.933 50.000 0.00 0.00 0.00 3.41
506 507 1.004044 AGTCCCAATCTGCCAAGTGAG 59.996 52.381 0.00 0.00 0.00 3.51
507 508 0.322816 TCCCAATCTGCCAAGTGAGC 60.323 55.000 0.00 0.00 0.00 4.26
508 509 0.609957 CCCAATCTGCCAAGTGAGCA 60.610 55.000 0.00 0.00 38.82 4.26
509 510 1.250328 CCAATCTGCCAAGTGAGCAA 58.750 50.000 0.00 0.00 40.35 3.91
510 511 1.614903 CCAATCTGCCAAGTGAGCAAA 59.385 47.619 0.00 0.00 40.35 3.68
511 512 2.036217 CCAATCTGCCAAGTGAGCAAAA 59.964 45.455 0.00 0.00 40.35 2.44
512 513 3.054878 CAATCTGCCAAGTGAGCAAAAC 58.945 45.455 0.00 0.00 40.35 2.43
513 514 2.057137 TCTGCCAAGTGAGCAAAACT 57.943 45.000 0.00 0.00 40.35 2.66
514 515 1.677576 TCTGCCAAGTGAGCAAAACTG 59.322 47.619 0.00 0.00 40.35 3.16
515 516 1.677576 CTGCCAAGTGAGCAAAACTGA 59.322 47.619 0.00 0.00 40.35 3.41
516 517 2.098614 TGCCAAGTGAGCAAAACTGAA 58.901 42.857 0.00 0.00 37.28 3.02
517 518 2.099592 TGCCAAGTGAGCAAAACTGAAG 59.900 45.455 0.00 0.00 37.28 3.02
518 519 2.544486 GCCAAGTGAGCAAAACTGAAGG 60.544 50.000 0.00 0.00 0.00 3.46
519 520 2.544486 CCAAGTGAGCAAAACTGAAGGC 60.544 50.000 0.00 0.00 0.00 4.35
520 521 2.057137 AGTGAGCAAAACTGAAGGCA 57.943 45.000 0.00 0.00 0.00 4.75
521 522 2.378038 AGTGAGCAAAACTGAAGGCAA 58.622 42.857 0.00 0.00 0.00 4.52
522 523 2.961062 AGTGAGCAAAACTGAAGGCAAT 59.039 40.909 0.00 0.00 0.00 3.56
523 524 4.144297 AGTGAGCAAAACTGAAGGCAATA 58.856 39.130 0.00 0.00 0.00 1.90
524 525 4.584325 AGTGAGCAAAACTGAAGGCAATAA 59.416 37.500 0.00 0.00 0.00 1.40
525 526 4.681483 GTGAGCAAAACTGAAGGCAATAAC 59.319 41.667 0.00 0.00 0.00 1.89
526 527 4.584325 TGAGCAAAACTGAAGGCAATAACT 59.416 37.500 0.00 0.00 0.00 2.24
527 528 5.068987 TGAGCAAAACTGAAGGCAATAACTT 59.931 36.000 0.00 0.00 0.00 2.66
528 529 5.532557 AGCAAAACTGAAGGCAATAACTTC 58.467 37.500 0.00 0.00 43.52 3.01
529 530 4.686091 GCAAAACTGAAGGCAATAACTTCC 59.314 41.667 0.00 0.00 42.79 3.46
530 531 5.230182 CAAAACTGAAGGCAATAACTTCCC 58.770 41.667 0.00 0.00 42.79 3.97
531 532 3.087370 ACTGAAGGCAATAACTTCCCC 57.913 47.619 0.00 0.00 42.79 4.81
532 533 2.291605 ACTGAAGGCAATAACTTCCCCC 60.292 50.000 0.00 0.00 42.79 5.40
533 534 1.340600 TGAAGGCAATAACTTCCCCCG 60.341 52.381 0.00 0.00 42.79 5.73
534 535 0.683179 AAGGCAATAACTTCCCCCGC 60.683 55.000 0.00 0.00 0.00 6.13
535 536 1.379309 GGCAATAACTTCCCCCGCA 60.379 57.895 0.00 0.00 0.00 5.69
536 537 0.968393 GGCAATAACTTCCCCCGCAA 60.968 55.000 0.00 0.00 0.00 4.85
537 538 0.892063 GCAATAACTTCCCCCGCAAA 59.108 50.000 0.00 0.00 0.00 3.68
538 539 1.480545 GCAATAACTTCCCCCGCAAAT 59.519 47.619 0.00 0.00 0.00 2.32
539 540 2.691011 GCAATAACTTCCCCCGCAAATA 59.309 45.455 0.00 0.00 0.00 1.40
540 541 3.243401 GCAATAACTTCCCCCGCAAATAG 60.243 47.826 0.00 0.00 0.00 1.73
541 542 2.721425 TAACTTCCCCCGCAAATAGG 57.279 50.000 0.00 0.00 0.00 2.57
556 557 5.177725 CAAATAGGGGTTTGCGTAATACC 57.822 43.478 8.38 8.38 32.90 2.73
559 560 3.888424 GGGTTTGCGTAATACCCCT 57.112 52.632 18.93 0.00 44.75 4.79
561 562 3.497103 GGGTTTGCGTAATACCCCTAT 57.503 47.619 18.93 0.00 44.75 2.57
562 563 3.405831 GGGTTTGCGTAATACCCCTATC 58.594 50.000 18.93 2.20 44.75 2.08
563 564 3.181452 GGGTTTGCGTAATACCCCTATCA 60.181 47.826 18.93 0.00 44.75 2.15
564 565 4.506095 GGGTTTGCGTAATACCCCTATCAT 60.506 45.833 18.93 0.00 44.75 2.45
565 566 5.280113 GGGTTTGCGTAATACCCCTATCATA 60.280 44.000 18.93 0.00 44.75 2.15
566 567 6.412214 GGTTTGCGTAATACCCCTATCATAT 58.588 40.000 6.40 0.00 0.00 1.78
595 596 5.602561 GGGTTAATTATCCTTTTGCCCTCAT 59.397 40.000 11.51 0.00 0.00 2.90
816 817 1.481772 GAGAGCCATTGAGCAGAGAGT 59.518 52.381 0.00 0.00 34.23 3.24
818 819 1.206610 GAGCCATTGAGCAGAGAGTCA 59.793 52.381 0.00 0.00 34.23 3.41
840 841 2.321719 TGGCGGGTGTGCTATATAAGA 58.678 47.619 0.00 0.00 34.52 2.10
1255 1263 2.309613 TGCAGGTGACATGCTTCTTTT 58.690 42.857 23.05 0.00 44.17 2.27
1489 1497 5.559148 ACCCATTTGCAAATACTTTTGGA 57.441 34.783 23.69 0.00 42.09 3.53
1728 1738 4.587684 TGATCAATGAGATGCAGCTCTCTA 59.412 41.667 30.29 13.02 41.87 2.43
1836 1848 2.862541 CATCCAATTAGGCCCATTCGA 58.137 47.619 0.00 0.00 37.29 3.71
2286 2300 8.589338 GGAAGGTATACATAGTGAGATTGTGAT 58.411 37.037 5.01 0.00 0.00 3.06
2438 2456 1.202891 AGTGGCACTTGGTTTAGGGTC 60.203 52.381 15.88 0.00 0.00 4.46
2526 2544 3.795688 ATGAAACAGAGGGCTTCTCAA 57.204 42.857 0.00 0.00 44.81 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.513515 TGACCAACTCCTGTTTGCTTTTT 59.486 39.130 0.00 0.00 33.52 1.94
10 11 3.096092 TGACCAACTCCTGTTTGCTTTT 58.904 40.909 0.00 0.00 33.52 2.27
11 12 2.427095 GTGACCAACTCCTGTTTGCTTT 59.573 45.455 0.00 0.00 33.52 3.51
12 13 2.024414 GTGACCAACTCCTGTTTGCTT 58.976 47.619 0.00 0.00 33.52 3.91
13 14 1.212935 AGTGACCAACTCCTGTTTGCT 59.787 47.619 0.00 0.00 31.64 3.91
14 15 1.680338 AGTGACCAACTCCTGTTTGC 58.320 50.000 0.00 0.00 31.64 3.68
15 16 4.035208 GTGTAAGTGACCAACTCCTGTTTG 59.965 45.833 0.00 0.00 38.56 2.93
16 17 4.196971 GTGTAAGTGACCAACTCCTGTTT 58.803 43.478 0.00 0.00 38.56 2.83
17 18 3.199071 TGTGTAAGTGACCAACTCCTGTT 59.801 43.478 0.00 0.00 38.56 3.16
18 19 2.769663 TGTGTAAGTGACCAACTCCTGT 59.230 45.455 0.00 0.00 38.56 4.00
19 20 3.469008 TGTGTAAGTGACCAACTCCTG 57.531 47.619 0.00 0.00 38.56 3.86
20 21 4.497291 TTTGTGTAAGTGACCAACTCCT 57.503 40.909 0.00 0.00 38.56 3.69
21 22 5.570234 TTTTTGTGTAAGTGACCAACTCC 57.430 39.130 0.00 0.00 38.56 3.85
49 50 4.394729 TGATTTTGTGTCAGGGTACTTCC 58.605 43.478 0.00 0.00 0.00 3.46
50 51 4.083271 GCTGATTTTGTGTCAGGGTACTTC 60.083 45.833 5.41 0.00 42.58 3.01
51 52 3.821033 GCTGATTTTGTGTCAGGGTACTT 59.179 43.478 5.41 0.00 42.58 2.24
52 53 3.181445 TGCTGATTTTGTGTCAGGGTACT 60.181 43.478 5.41 0.00 42.58 2.73
53 54 3.146066 TGCTGATTTTGTGTCAGGGTAC 58.854 45.455 5.41 0.00 42.58 3.34
54 55 3.500448 TGCTGATTTTGTGTCAGGGTA 57.500 42.857 5.41 0.00 42.58 3.69
55 56 2.363306 TGCTGATTTTGTGTCAGGGT 57.637 45.000 5.41 0.00 42.58 4.34
56 57 3.758023 TGTATGCTGATTTTGTGTCAGGG 59.242 43.478 5.41 0.00 42.58 4.45
57 58 5.571784 ATGTATGCTGATTTTGTGTCAGG 57.428 39.130 5.41 0.00 42.58 3.86
58 59 7.216881 CGTTTATGTATGCTGATTTTGTGTCAG 59.783 37.037 0.00 0.00 44.60 3.51
59 60 7.020602 CGTTTATGTATGCTGATTTTGTGTCA 58.979 34.615 0.00 0.00 0.00 3.58
60 61 6.021468 GCGTTTATGTATGCTGATTTTGTGTC 60.021 38.462 0.00 0.00 0.00 3.67
61 62 5.799936 GCGTTTATGTATGCTGATTTTGTGT 59.200 36.000 0.00 0.00 0.00 3.72
62 63 6.029607 AGCGTTTATGTATGCTGATTTTGTG 58.970 36.000 0.00 0.00 38.89 3.33
63 64 6.194796 AGCGTTTATGTATGCTGATTTTGT 57.805 33.333 0.00 0.00 38.89 2.83
64 65 7.376866 CCTTAGCGTTTATGTATGCTGATTTTG 59.623 37.037 0.00 0.00 40.47 2.44
65 66 7.417612 CCTTAGCGTTTATGTATGCTGATTTT 58.582 34.615 0.00 0.00 40.47 1.82
66 67 6.513393 GCCTTAGCGTTTATGTATGCTGATTT 60.513 38.462 0.00 0.00 40.47 2.17
67 68 5.049405 GCCTTAGCGTTTATGTATGCTGATT 60.049 40.000 0.00 0.00 40.47 2.57
68 69 4.452455 GCCTTAGCGTTTATGTATGCTGAT 59.548 41.667 0.00 0.00 40.47 2.90
69 70 3.807622 GCCTTAGCGTTTATGTATGCTGA 59.192 43.478 0.00 0.00 40.47 4.26
70 71 3.058914 GGCCTTAGCGTTTATGTATGCTG 60.059 47.826 0.00 0.00 40.47 4.41
71 72 3.139077 GGCCTTAGCGTTTATGTATGCT 58.861 45.455 0.00 0.00 42.73 3.79
72 73 2.875933 TGGCCTTAGCGTTTATGTATGC 59.124 45.455 3.32 0.00 41.24 3.14
73 74 3.874543 TGTGGCCTTAGCGTTTATGTATG 59.125 43.478 3.32 0.00 41.24 2.39
74 75 3.875134 GTGTGGCCTTAGCGTTTATGTAT 59.125 43.478 3.32 0.00 41.24 2.29
75 76 3.264104 GTGTGGCCTTAGCGTTTATGTA 58.736 45.455 3.32 0.00 41.24 2.29
76 77 2.081462 GTGTGGCCTTAGCGTTTATGT 58.919 47.619 3.32 0.00 41.24 2.29
77 78 1.400494 GGTGTGGCCTTAGCGTTTATG 59.600 52.381 3.32 0.00 41.24 1.90
78 79 1.003812 TGGTGTGGCCTTAGCGTTTAT 59.996 47.619 3.32 0.00 41.24 1.40
79 80 0.397187 TGGTGTGGCCTTAGCGTTTA 59.603 50.000 3.32 0.00 41.24 2.01
80 81 0.466555 TTGGTGTGGCCTTAGCGTTT 60.467 50.000 3.32 0.00 41.24 3.60
81 82 0.466555 TTTGGTGTGGCCTTAGCGTT 60.467 50.000 3.32 0.00 41.24 4.84
82 83 0.466555 TTTTGGTGTGGCCTTAGCGT 60.467 50.000 3.32 0.00 41.24 5.07
83 84 0.039527 GTTTTGGTGTGGCCTTAGCG 60.040 55.000 3.32 0.00 41.24 4.26
84 85 1.036707 TGTTTTGGTGTGGCCTTAGC 58.963 50.000 3.32 2.87 38.35 3.09
85 86 1.339929 GGTGTTTTGGTGTGGCCTTAG 59.660 52.381 3.32 0.00 38.35 2.18
86 87 1.342076 TGGTGTTTTGGTGTGGCCTTA 60.342 47.619 3.32 0.00 38.35 2.69
87 88 0.616111 TGGTGTTTTGGTGTGGCCTT 60.616 50.000 3.32 0.00 38.35 4.35
88 89 0.616111 TTGGTGTTTTGGTGTGGCCT 60.616 50.000 3.32 0.00 38.35 5.19
89 90 0.461163 GTTGGTGTTTTGGTGTGGCC 60.461 55.000 0.00 0.00 37.90 5.36
90 91 0.247736 TGTTGGTGTTTTGGTGTGGC 59.752 50.000 0.00 0.00 0.00 5.01
91 92 1.738700 GCTGTTGGTGTTTTGGTGTGG 60.739 52.381 0.00 0.00 0.00 4.17
92 93 1.204467 AGCTGTTGGTGTTTTGGTGTG 59.796 47.619 0.00 0.00 0.00 3.82
93 94 1.555967 AGCTGTTGGTGTTTTGGTGT 58.444 45.000 0.00 0.00 0.00 4.16
94 95 3.791973 TTAGCTGTTGGTGTTTTGGTG 57.208 42.857 0.00 0.00 0.00 4.17
95 96 6.322712 TCTTAATTAGCTGTTGGTGTTTTGGT 59.677 34.615 0.00 0.00 0.00 3.67
96 97 6.744112 TCTTAATTAGCTGTTGGTGTTTTGG 58.256 36.000 0.00 0.00 0.00 3.28
97 98 8.641499 TTTCTTAATTAGCTGTTGGTGTTTTG 57.359 30.769 0.00 0.00 0.00 2.44
98 99 9.830975 AATTTCTTAATTAGCTGTTGGTGTTTT 57.169 25.926 0.00 0.00 32.25 2.43
99 100 9.830975 AAATTTCTTAATTAGCTGTTGGTGTTT 57.169 25.926 0.00 0.00 32.85 2.83
100 101 9.260002 CAAATTTCTTAATTAGCTGTTGGTGTT 57.740 29.630 0.00 0.00 32.85 3.32
101 102 8.637986 TCAAATTTCTTAATTAGCTGTTGGTGT 58.362 29.630 0.00 0.00 32.85 4.16
102 103 8.915654 GTCAAATTTCTTAATTAGCTGTTGGTG 58.084 33.333 0.00 0.00 32.85 4.17
103 104 8.088365 GGTCAAATTTCTTAATTAGCTGTTGGT 58.912 33.333 0.00 0.00 32.85 3.67
104 105 8.306761 AGGTCAAATTTCTTAATTAGCTGTTGG 58.693 33.333 0.00 0.00 32.85 3.77
108 109 9.956720 CCATAGGTCAAATTTCTTAATTAGCTG 57.043 33.333 0.00 0.00 32.85 4.24
109 110 9.920946 TCCATAGGTCAAATTTCTTAATTAGCT 57.079 29.630 0.00 0.00 32.85 3.32
113 114 8.478066 GGCTTCCATAGGTCAAATTTCTTAATT 58.522 33.333 0.00 0.00 35.49 1.40
114 115 7.841222 AGGCTTCCATAGGTCAAATTTCTTAAT 59.159 33.333 0.00 0.00 0.00 1.40
115 116 7.182060 AGGCTTCCATAGGTCAAATTTCTTAA 58.818 34.615 0.00 0.00 0.00 1.85
116 117 6.731467 AGGCTTCCATAGGTCAAATTTCTTA 58.269 36.000 0.00 0.00 0.00 2.10
117 118 5.583932 AGGCTTCCATAGGTCAAATTTCTT 58.416 37.500 0.00 0.00 0.00 2.52
118 119 5.198602 AGGCTTCCATAGGTCAAATTTCT 57.801 39.130 0.00 0.00 0.00 2.52
119 120 5.885912 TGTAGGCTTCCATAGGTCAAATTTC 59.114 40.000 0.00 0.00 0.00 2.17
120 121 5.826643 TGTAGGCTTCCATAGGTCAAATTT 58.173 37.500 0.00 0.00 0.00 1.82
121 122 5.450818 TGTAGGCTTCCATAGGTCAAATT 57.549 39.130 0.00 0.00 0.00 1.82
122 123 5.193679 GTTGTAGGCTTCCATAGGTCAAAT 58.806 41.667 0.00 0.00 0.00 2.32
123 124 4.566907 GGTTGTAGGCTTCCATAGGTCAAA 60.567 45.833 0.00 0.00 0.00 2.69
124 125 3.054655 GGTTGTAGGCTTCCATAGGTCAA 60.055 47.826 0.00 0.00 0.00 3.18
125 126 2.504175 GGTTGTAGGCTTCCATAGGTCA 59.496 50.000 0.00 0.00 0.00 4.02
126 127 2.504175 TGGTTGTAGGCTTCCATAGGTC 59.496 50.000 0.00 0.00 0.00 3.85
127 128 2.238898 GTGGTTGTAGGCTTCCATAGGT 59.761 50.000 0.00 0.00 32.45 3.08
128 129 2.238646 TGTGGTTGTAGGCTTCCATAGG 59.761 50.000 0.00 0.00 32.45 2.57
129 130 3.270877 GTGTGGTTGTAGGCTTCCATAG 58.729 50.000 0.00 0.00 32.45 2.23
130 131 2.640332 TGTGTGGTTGTAGGCTTCCATA 59.360 45.455 0.00 0.00 32.45 2.74
131 132 1.423541 TGTGTGGTTGTAGGCTTCCAT 59.576 47.619 0.00 0.00 32.45 3.41
132 133 0.840617 TGTGTGGTTGTAGGCTTCCA 59.159 50.000 0.00 0.00 0.00 3.53
133 134 1.880027 CTTGTGTGGTTGTAGGCTTCC 59.120 52.381 0.00 0.00 0.00 3.46
134 135 2.846193 TCTTGTGTGGTTGTAGGCTTC 58.154 47.619 0.00 0.00 0.00 3.86
135 136 3.508845 ATCTTGTGTGGTTGTAGGCTT 57.491 42.857 0.00 0.00 0.00 4.35
136 137 3.508845 AATCTTGTGTGGTTGTAGGCT 57.491 42.857 0.00 0.00 0.00 4.58
137 138 4.584327 AAAATCTTGTGTGGTTGTAGGC 57.416 40.909 0.00 0.00 0.00 3.93
138 139 6.677913 CCTAAAAATCTTGTGTGGTTGTAGG 58.322 40.000 0.00 0.00 0.00 3.18
139 140 6.016276 AGCCTAAAAATCTTGTGTGGTTGTAG 60.016 38.462 0.00 0.00 0.00 2.74
140 141 5.830991 AGCCTAAAAATCTTGTGTGGTTGTA 59.169 36.000 0.00 0.00 0.00 2.41
141 142 4.649218 AGCCTAAAAATCTTGTGTGGTTGT 59.351 37.500 0.00 0.00 0.00 3.32
142 143 4.984161 CAGCCTAAAAATCTTGTGTGGTTG 59.016 41.667 0.00 0.00 0.00 3.77
143 144 4.039124 CCAGCCTAAAAATCTTGTGTGGTT 59.961 41.667 0.00 0.00 0.00 3.67
144 145 3.573967 CCAGCCTAAAAATCTTGTGTGGT 59.426 43.478 0.00 0.00 0.00 4.16
145 146 3.573967 ACCAGCCTAAAAATCTTGTGTGG 59.426 43.478 0.00 0.00 0.00 4.17
146 147 4.278170 TGACCAGCCTAAAAATCTTGTGTG 59.722 41.667 0.00 0.00 0.00 3.82
147 148 4.469657 TGACCAGCCTAAAAATCTTGTGT 58.530 39.130 0.00 0.00 0.00 3.72
148 149 5.649782 ATGACCAGCCTAAAAATCTTGTG 57.350 39.130 0.00 0.00 0.00 3.33
149 150 6.375455 CACTATGACCAGCCTAAAAATCTTGT 59.625 38.462 0.00 0.00 0.00 3.16
150 151 6.183360 CCACTATGACCAGCCTAAAAATCTTG 60.183 42.308 0.00 0.00 0.00 3.02
151 152 5.888161 CCACTATGACCAGCCTAAAAATCTT 59.112 40.000 0.00 0.00 0.00 2.40
152 153 5.440610 CCACTATGACCAGCCTAAAAATCT 58.559 41.667 0.00 0.00 0.00 2.40
153 154 4.580580 CCCACTATGACCAGCCTAAAAATC 59.419 45.833 0.00 0.00 0.00 2.17
154 155 4.229582 TCCCACTATGACCAGCCTAAAAAT 59.770 41.667 0.00 0.00 0.00 1.82
155 156 3.589735 TCCCACTATGACCAGCCTAAAAA 59.410 43.478 0.00 0.00 0.00 1.94
156 157 3.186283 TCCCACTATGACCAGCCTAAAA 58.814 45.455 0.00 0.00 0.00 1.52
157 158 2.771943 CTCCCACTATGACCAGCCTAAA 59.228 50.000 0.00 0.00 0.00 1.85
158 159 2.292918 ACTCCCACTATGACCAGCCTAA 60.293 50.000 0.00 0.00 0.00 2.69
159 160 1.291033 ACTCCCACTATGACCAGCCTA 59.709 52.381 0.00 0.00 0.00 3.93
160 161 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
161 162 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
162 163 2.766828 AGTTACTCCCACTATGACCAGC 59.233 50.000 0.00 0.00 0.00 4.85
163 164 5.452077 GCTAAGTTACTCCCACTATGACCAG 60.452 48.000 0.00 0.00 0.00 4.00
164 165 4.404715 GCTAAGTTACTCCCACTATGACCA 59.595 45.833 0.00 0.00 0.00 4.02
165 166 4.404715 TGCTAAGTTACTCCCACTATGACC 59.595 45.833 0.00 0.00 0.00 4.02
166 167 5.593679 TGCTAAGTTACTCCCACTATGAC 57.406 43.478 0.00 0.00 0.00 3.06
167 168 5.720041 ACTTGCTAAGTTACTCCCACTATGA 59.280 40.000 0.00 0.00 39.04 2.15
168 169 5.978814 ACTTGCTAAGTTACTCCCACTATG 58.021 41.667 0.00 0.00 39.04 2.23
169 170 7.179694 TGTTACTTGCTAAGTTACTCCCACTAT 59.820 37.037 14.64 0.00 40.62 2.12
170 171 6.494491 TGTTACTTGCTAAGTTACTCCCACTA 59.506 38.462 14.64 0.00 40.62 2.74
171 172 5.306160 TGTTACTTGCTAAGTTACTCCCACT 59.694 40.000 14.64 0.00 40.62 4.00
172 173 5.544650 TGTTACTTGCTAAGTTACTCCCAC 58.455 41.667 14.64 0.00 40.62 4.61
173 174 5.811796 TGTTACTTGCTAAGTTACTCCCA 57.188 39.130 14.64 0.00 40.62 4.37
174 175 6.479331 GCTATGTTACTTGCTAAGTTACTCCC 59.521 42.308 14.64 3.51 40.62 4.30
175 176 6.198591 CGCTATGTTACTTGCTAAGTTACTCC 59.801 42.308 14.64 5.01 40.62 3.85
176 177 6.291690 GCGCTATGTTACTTGCTAAGTTACTC 60.292 42.308 0.00 5.69 40.62 2.59
177 178 5.519206 GCGCTATGTTACTTGCTAAGTTACT 59.481 40.000 0.00 0.00 40.62 2.24
178 179 5.290158 TGCGCTATGTTACTTGCTAAGTTAC 59.710 40.000 9.73 8.42 42.81 2.50
179 180 5.412640 TGCGCTATGTTACTTGCTAAGTTA 58.587 37.500 9.73 0.00 42.81 2.24
180 181 4.250464 TGCGCTATGTTACTTGCTAAGTT 58.750 39.130 9.73 0.00 42.81 2.66
181 182 3.857052 TGCGCTATGTTACTTGCTAAGT 58.143 40.909 9.73 6.74 45.40 2.24
182 183 5.409643 AATGCGCTATGTTACTTGCTAAG 57.590 39.130 9.73 0.00 0.00 2.18
183 184 4.272504 GGAATGCGCTATGTTACTTGCTAA 59.727 41.667 9.73 0.00 0.00 3.09
184 185 3.807622 GGAATGCGCTATGTTACTTGCTA 59.192 43.478 9.73 0.00 0.00 3.49
185 186 2.614057 GGAATGCGCTATGTTACTTGCT 59.386 45.455 9.73 0.00 0.00 3.91
186 187 2.354510 TGGAATGCGCTATGTTACTTGC 59.645 45.455 9.73 0.00 0.00 4.01
187 188 4.332543 TCTTGGAATGCGCTATGTTACTTG 59.667 41.667 9.73 0.00 0.00 3.16
188 189 4.332819 GTCTTGGAATGCGCTATGTTACTT 59.667 41.667 9.73 0.00 0.00 2.24
189 190 3.871594 GTCTTGGAATGCGCTATGTTACT 59.128 43.478 9.73 0.00 0.00 2.24
190 191 3.621268 TGTCTTGGAATGCGCTATGTTAC 59.379 43.478 9.73 0.00 0.00 2.50
191 192 3.867857 TGTCTTGGAATGCGCTATGTTA 58.132 40.909 9.73 0.00 0.00 2.41
192 193 2.710377 TGTCTTGGAATGCGCTATGTT 58.290 42.857 9.73 0.00 0.00 2.71
193 194 2.401583 TGTCTTGGAATGCGCTATGT 57.598 45.000 9.73 0.00 0.00 2.29
194 195 2.679837 ACTTGTCTTGGAATGCGCTATG 59.320 45.455 9.73 0.00 0.00 2.23
195 196 2.991250 ACTTGTCTTGGAATGCGCTAT 58.009 42.857 9.73 0.00 0.00 2.97
196 197 2.472695 ACTTGTCTTGGAATGCGCTA 57.527 45.000 9.73 0.00 0.00 4.26
197 198 1.609208 AACTTGTCTTGGAATGCGCT 58.391 45.000 9.73 0.00 0.00 5.92
198 199 2.053627 CAAACTTGTCTTGGAATGCGC 58.946 47.619 0.00 0.00 0.00 6.09
199 200 2.053627 GCAAACTTGTCTTGGAATGCG 58.946 47.619 0.00 0.00 0.00 4.73
200 201 3.375782 AGCAAACTTGTCTTGGAATGC 57.624 42.857 0.00 0.00 0.00 3.56
201 202 6.364165 CACATAAGCAAACTTGTCTTGGAATG 59.636 38.462 8.46 7.35 36.57 2.67
202 203 6.449698 CACATAAGCAAACTTGTCTTGGAAT 58.550 36.000 8.46 0.00 36.57 3.01
203 204 5.221224 CCACATAAGCAAACTTGTCTTGGAA 60.221 40.000 8.46 0.00 36.57 3.53
204 205 4.278170 CCACATAAGCAAACTTGTCTTGGA 59.722 41.667 8.46 0.00 36.57 3.53
205 206 4.549458 CCACATAAGCAAACTTGTCTTGG 58.451 43.478 8.46 0.00 36.57 3.61
206 207 3.983344 GCCACATAAGCAAACTTGTCTTG 59.017 43.478 8.46 0.00 36.57 3.02
207 208 3.636300 TGCCACATAAGCAAACTTGTCTT 59.364 39.130 0.00 5.07 37.28 3.01
208 209 3.221771 TGCCACATAAGCAAACTTGTCT 58.778 40.909 0.00 0.00 37.28 3.41
209 210 3.641437 TGCCACATAAGCAAACTTGTC 57.359 42.857 0.00 0.00 37.28 3.18
210 211 3.828451 AGATGCCACATAAGCAAACTTGT 59.172 39.130 0.00 0.00 44.83 3.16
211 212 4.445452 AGATGCCACATAAGCAAACTTG 57.555 40.909 0.00 0.00 44.83 3.16
212 213 5.256474 ACTAGATGCCACATAAGCAAACTT 58.744 37.500 0.00 0.00 44.83 2.66
213 214 4.848357 ACTAGATGCCACATAAGCAAACT 58.152 39.130 0.00 0.00 44.83 2.66
214 215 5.567138 AACTAGATGCCACATAAGCAAAC 57.433 39.130 0.00 0.00 44.83 2.93
215 216 7.555914 TCATTAACTAGATGCCACATAAGCAAA 59.444 33.333 0.00 0.00 44.83 3.68
216 217 7.053498 TCATTAACTAGATGCCACATAAGCAA 58.947 34.615 0.00 0.00 44.83 3.91
217 218 6.591001 TCATTAACTAGATGCCACATAAGCA 58.409 36.000 0.00 0.00 45.94 3.91
218 219 6.148480 CCTCATTAACTAGATGCCACATAAGC 59.852 42.308 0.00 0.00 0.00 3.09
219 220 7.445121 TCCTCATTAACTAGATGCCACATAAG 58.555 38.462 0.00 0.00 0.00 1.73
220 221 7.290014 TCTCCTCATTAACTAGATGCCACATAA 59.710 37.037 0.00 0.00 0.00 1.90
221 222 6.782494 TCTCCTCATTAACTAGATGCCACATA 59.218 38.462 0.00 0.00 0.00 2.29
222 223 5.604231 TCTCCTCATTAACTAGATGCCACAT 59.396 40.000 0.00 0.00 0.00 3.21
223 224 4.962362 TCTCCTCATTAACTAGATGCCACA 59.038 41.667 0.00 0.00 0.00 4.17
224 225 5.303078 TCTCTCCTCATTAACTAGATGCCAC 59.697 44.000 0.00 0.00 0.00 5.01
225 226 5.458595 TCTCTCCTCATTAACTAGATGCCA 58.541 41.667 0.00 0.00 0.00 4.92
226 227 6.014669 ACATCTCTCCTCATTAACTAGATGCC 60.015 42.308 0.00 0.00 41.50 4.40
227 228 6.867816 CACATCTCTCCTCATTAACTAGATGC 59.132 42.308 0.00 0.00 41.50 3.91
228 229 7.950512 ACACATCTCTCCTCATTAACTAGATG 58.049 38.462 0.00 0.00 42.77 2.90
229 230 8.546083 AACACATCTCTCCTCATTAACTAGAT 57.454 34.615 0.00 0.00 0.00 1.98
230 231 7.962995 AACACATCTCTCCTCATTAACTAGA 57.037 36.000 0.00 0.00 0.00 2.43
231 232 7.493971 CCAAACACATCTCTCCTCATTAACTAG 59.506 40.741 0.00 0.00 0.00 2.57
232 233 7.180229 TCCAAACACATCTCTCCTCATTAACTA 59.820 37.037 0.00 0.00 0.00 2.24
233 234 6.013379 TCCAAACACATCTCTCCTCATTAACT 60.013 38.462 0.00 0.00 0.00 2.24
234 235 6.173339 TCCAAACACATCTCTCCTCATTAAC 58.827 40.000 0.00 0.00 0.00 2.01
235 236 6.013379 ACTCCAAACACATCTCTCCTCATTAA 60.013 38.462 0.00 0.00 0.00 1.40
236 237 5.485353 ACTCCAAACACATCTCTCCTCATTA 59.515 40.000 0.00 0.00 0.00 1.90
237 238 4.288105 ACTCCAAACACATCTCTCCTCATT 59.712 41.667 0.00 0.00 0.00 2.57
238 239 3.843027 ACTCCAAACACATCTCTCCTCAT 59.157 43.478 0.00 0.00 0.00 2.90
239 240 3.242867 ACTCCAAACACATCTCTCCTCA 58.757 45.455 0.00 0.00 0.00 3.86
240 241 3.971245 ACTCCAAACACATCTCTCCTC 57.029 47.619 0.00 0.00 0.00 3.71
241 242 4.593206 TGTTACTCCAAACACATCTCTCCT 59.407 41.667 0.00 0.00 34.50 3.69
242 243 4.894784 TGTTACTCCAAACACATCTCTCC 58.105 43.478 0.00 0.00 34.50 3.71
243 244 8.723942 ATTATGTTACTCCAAACACATCTCTC 57.276 34.615 0.00 0.00 41.89 3.20
246 247 9.905713 ACATATTATGTTACTCCAAACACATCT 57.094 29.630 3.40 0.00 41.63 2.90
271 272 5.988092 TGGTTTGCGTTATGTTACAGTAAC 58.012 37.500 15.58 15.58 39.11 2.50
272 273 6.615264 TTGGTTTGCGTTATGTTACAGTAA 57.385 33.333 0.00 0.00 0.00 2.24
273 274 6.615264 TTTGGTTTGCGTTATGTTACAGTA 57.385 33.333 0.00 0.00 0.00 2.74
274 275 5.502153 TTTGGTTTGCGTTATGTTACAGT 57.498 34.783 0.00 0.00 0.00 3.55
275 276 4.381566 GCTTTGGTTTGCGTTATGTTACAG 59.618 41.667 0.00 0.00 0.00 2.74
276 277 4.202020 TGCTTTGGTTTGCGTTATGTTACA 60.202 37.500 0.00 0.00 0.00 2.41
277 278 4.291783 TGCTTTGGTTTGCGTTATGTTAC 58.708 39.130 0.00 0.00 0.00 2.50
278 279 4.569761 TGCTTTGGTTTGCGTTATGTTA 57.430 36.364 0.00 0.00 0.00 2.41
279 280 3.444703 TGCTTTGGTTTGCGTTATGTT 57.555 38.095 0.00 0.00 0.00 2.71
280 281 3.444703 TTGCTTTGGTTTGCGTTATGT 57.555 38.095 0.00 0.00 0.00 2.29
281 282 4.785669 TTTTGCTTTGGTTTGCGTTATG 57.214 36.364 0.00 0.00 0.00 1.90
282 283 5.053145 TCATTTTGCTTTGGTTTGCGTTAT 58.947 33.333 0.00 0.00 0.00 1.89
283 284 4.433615 TCATTTTGCTTTGGTTTGCGTTA 58.566 34.783 0.00 0.00 0.00 3.18
284 285 3.265791 TCATTTTGCTTTGGTTTGCGTT 58.734 36.364 0.00 0.00 0.00 4.84
285 286 2.865551 CTCATTTTGCTTTGGTTTGCGT 59.134 40.909 0.00 0.00 0.00 5.24
286 287 2.865551 ACTCATTTTGCTTTGGTTTGCG 59.134 40.909 0.00 0.00 0.00 4.85
287 288 4.122046 AGACTCATTTTGCTTTGGTTTGC 58.878 39.130 0.00 0.00 0.00 3.68
288 289 9.643693 ATTATAGACTCATTTTGCTTTGGTTTG 57.356 29.630 0.00 0.00 0.00 2.93
289 290 9.643693 CATTATAGACTCATTTTGCTTTGGTTT 57.356 29.630 0.00 0.00 0.00 3.27
290 291 8.806146 ACATTATAGACTCATTTTGCTTTGGTT 58.194 29.630 0.00 0.00 0.00 3.67
291 292 8.353423 ACATTATAGACTCATTTTGCTTTGGT 57.647 30.769 0.00 0.00 0.00 3.67
334 335 9.884636 TGCAAAGTAACATACAAGTAGTATCAT 57.115 29.630 0.00 0.00 41.47 2.45
335 336 9.146984 GTGCAAAGTAACATACAAGTAGTATCA 57.853 33.333 0.00 0.00 41.47 2.15
336 337 9.367444 AGTGCAAAGTAACATACAAGTAGTATC 57.633 33.333 0.00 0.00 41.47 2.24
339 340 9.151471 CATAGTGCAAAGTAACATACAAGTAGT 57.849 33.333 0.00 0.00 0.00 2.73
340 341 9.366216 TCATAGTGCAAAGTAACATACAAGTAG 57.634 33.333 0.00 0.00 0.00 2.57
341 342 9.713713 TTCATAGTGCAAAGTAACATACAAGTA 57.286 29.630 0.00 0.00 0.00 2.24
342 343 8.615878 TTCATAGTGCAAAGTAACATACAAGT 57.384 30.769 0.00 0.00 0.00 3.16
343 344 8.177663 CCTTCATAGTGCAAAGTAACATACAAG 58.822 37.037 0.00 0.00 0.00 3.16
344 345 7.663905 ACCTTCATAGTGCAAAGTAACATACAA 59.336 33.333 0.00 0.00 0.00 2.41
345 346 7.165485 ACCTTCATAGTGCAAAGTAACATACA 58.835 34.615 0.00 0.00 0.00 2.29
346 347 7.611213 ACCTTCATAGTGCAAAGTAACATAC 57.389 36.000 0.00 0.00 0.00 2.39
347 348 8.537016 ACTACCTTCATAGTGCAAAGTAACATA 58.463 33.333 0.00 0.00 34.02 2.29
348 349 7.394816 ACTACCTTCATAGTGCAAAGTAACAT 58.605 34.615 0.00 0.00 34.02 2.71
349 350 6.765403 ACTACCTTCATAGTGCAAAGTAACA 58.235 36.000 0.00 0.00 34.02 2.41
350 351 8.654215 GTTACTACCTTCATAGTGCAAAGTAAC 58.346 37.037 0.00 0.00 39.37 2.50
351 352 8.369424 TGTTACTACCTTCATAGTGCAAAGTAA 58.631 33.333 0.00 0.00 36.09 2.24
352 353 7.898918 TGTTACTACCTTCATAGTGCAAAGTA 58.101 34.615 0.00 0.00 36.09 2.24
353 354 6.765403 TGTTACTACCTTCATAGTGCAAAGT 58.235 36.000 0.00 0.00 36.09 2.66
354 355 7.667043 TTGTTACTACCTTCATAGTGCAAAG 57.333 36.000 0.00 0.00 36.09 2.77
355 356 7.934665 TCTTTGTTACTACCTTCATAGTGCAAA 59.065 33.333 0.00 12.52 38.09 3.68
356 357 7.386848 GTCTTTGTTACTACCTTCATAGTGCAA 59.613 37.037 0.00 0.00 36.09 4.08
357 358 6.872020 GTCTTTGTTACTACCTTCATAGTGCA 59.128 38.462 0.00 0.00 36.09 4.57
358 359 7.097834 AGTCTTTGTTACTACCTTCATAGTGC 58.902 38.462 0.00 0.00 36.09 4.40
359 360 9.790389 CTAGTCTTTGTTACTACCTTCATAGTG 57.210 37.037 0.00 0.00 36.09 2.74
360 361 9.531158 ACTAGTCTTTGTTACTACCTTCATAGT 57.469 33.333 0.00 0.00 38.89 2.12
361 362 9.790389 CACTAGTCTTTGTTACTACCTTCATAG 57.210 37.037 0.00 0.00 0.00 2.23
362 363 9.305555 ACACTAGTCTTTGTTACTACCTTCATA 57.694 33.333 0.00 0.00 0.00 2.15
363 364 8.191534 ACACTAGTCTTTGTTACTACCTTCAT 57.808 34.615 0.00 0.00 0.00 2.57
364 365 7.286087 TGACACTAGTCTTTGTTACTACCTTCA 59.714 37.037 0.00 0.00 45.20 3.02
365 366 7.655490 TGACACTAGTCTTTGTTACTACCTTC 58.345 38.462 0.00 0.00 45.20 3.46
366 367 7.592885 TGACACTAGTCTTTGTTACTACCTT 57.407 36.000 0.00 0.00 45.20 3.50
367 368 7.778185 ATGACACTAGTCTTTGTTACTACCT 57.222 36.000 0.00 0.00 45.20 3.08
368 369 9.517609 CATATGACACTAGTCTTTGTTACTACC 57.482 37.037 0.00 0.00 45.20 3.18
369 370 9.021863 GCATATGACACTAGTCTTTGTTACTAC 57.978 37.037 6.97 0.00 45.20 2.73
370 371 8.745590 TGCATATGACACTAGTCTTTGTTACTA 58.254 33.333 6.97 0.00 45.20 1.82
371 372 7.611770 TGCATATGACACTAGTCTTTGTTACT 58.388 34.615 6.97 0.00 45.20 2.24
372 373 7.827819 TGCATATGACACTAGTCTTTGTTAC 57.172 36.000 6.97 0.00 45.20 2.50
373 374 8.257306 TCATGCATATGACACTAGTCTTTGTTA 58.743 33.333 6.97 0.00 45.20 2.41
374 375 7.105588 TCATGCATATGACACTAGTCTTTGTT 58.894 34.615 6.97 0.00 45.20 2.83
375 376 6.643388 TCATGCATATGACACTAGTCTTTGT 58.357 36.000 6.97 0.00 45.20 2.83
391 392 9.967346 GAGTAATTTAGACTAGTGTCATGCATA 57.033 33.333 0.00 0.00 45.20 3.14
392 393 7.928706 GGAGTAATTTAGACTAGTGTCATGCAT 59.071 37.037 0.00 0.00 45.20 3.96
393 394 7.265673 GGAGTAATTTAGACTAGTGTCATGCA 58.734 38.462 0.00 0.00 45.20 3.96
394 395 6.702282 GGGAGTAATTTAGACTAGTGTCATGC 59.298 42.308 0.00 0.00 45.20 4.06
395 396 7.147724 TGGGGAGTAATTTAGACTAGTGTCATG 60.148 40.741 0.00 0.00 45.20 3.07
396 397 6.901300 TGGGGAGTAATTTAGACTAGTGTCAT 59.099 38.462 0.00 0.00 45.20 3.06
397 398 6.154021 GTGGGGAGTAATTTAGACTAGTGTCA 59.846 42.308 0.00 0.00 45.20 3.58
398 399 6.380560 AGTGGGGAGTAATTTAGACTAGTGTC 59.619 42.308 0.00 0.00 43.22 3.67
399 400 6.262207 AGTGGGGAGTAATTTAGACTAGTGT 58.738 40.000 0.00 0.00 0.00 3.55
400 401 6.793505 AGTGGGGAGTAATTTAGACTAGTG 57.206 41.667 0.00 0.00 0.00 2.74
401 402 8.287350 TCATAGTGGGGAGTAATTTAGACTAGT 58.713 37.037 0.00 0.00 0.00 2.57
402 403 8.707796 TCATAGTGGGGAGTAATTTAGACTAG 57.292 38.462 0.00 0.00 0.00 2.57
403 404 7.232941 GCTCATAGTGGGGAGTAATTTAGACTA 59.767 40.741 0.00 0.00 33.66 2.59
404 405 6.042208 GCTCATAGTGGGGAGTAATTTAGACT 59.958 42.308 0.00 0.00 33.66 3.24
405 406 6.183360 TGCTCATAGTGGGGAGTAATTTAGAC 60.183 42.308 0.00 0.00 33.66 2.59
406 407 5.903010 TGCTCATAGTGGGGAGTAATTTAGA 59.097 40.000 0.00 0.00 33.66 2.10
407 408 6.174720 TGCTCATAGTGGGGAGTAATTTAG 57.825 41.667 0.00 0.00 33.66 1.85
408 409 5.454755 GCTGCTCATAGTGGGGAGTAATTTA 60.455 44.000 0.37 0.00 38.69 1.40
409 410 4.687219 GCTGCTCATAGTGGGGAGTAATTT 60.687 45.833 0.37 0.00 38.69 1.82
410 411 3.181450 GCTGCTCATAGTGGGGAGTAATT 60.181 47.826 0.37 0.00 38.69 1.40
411 412 2.370189 GCTGCTCATAGTGGGGAGTAAT 59.630 50.000 0.37 0.00 38.69 1.89
412 413 1.762957 GCTGCTCATAGTGGGGAGTAA 59.237 52.381 0.37 0.00 38.69 2.24
413 414 1.414158 GCTGCTCATAGTGGGGAGTA 58.586 55.000 0.37 0.00 38.69 2.59
414 415 1.341156 GGCTGCTCATAGTGGGGAGT 61.341 60.000 0.00 0.00 38.69 3.85
415 416 1.053264 AGGCTGCTCATAGTGGGGAG 61.053 60.000 0.00 0.00 39.53 4.30
416 417 0.621571 AAGGCTGCTCATAGTGGGGA 60.622 55.000 0.00 0.00 0.00 4.81
417 418 1.131638 TAAGGCTGCTCATAGTGGGG 58.868 55.000 0.00 0.00 0.00 4.96
418 419 1.486310 TGTAAGGCTGCTCATAGTGGG 59.514 52.381 0.00 0.00 0.00 4.61
419 420 2.555199 GTGTAAGGCTGCTCATAGTGG 58.445 52.381 0.00 0.00 0.00 4.00
420 421 2.555199 GGTGTAAGGCTGCTCATAGTG 58.445 52.381 0.00 0.00 0.00 2.74
421 422 1.486726 GGGTGTAAGGCTGCTCATAGT 59.513 52.381 0.00 0.00 0.00 2.12
422 423 1.486310 TGGGTGTAAGGCTGCTCATAG 59.514 52.381 0.00 0.00 0.00 2.23
423 424 1.486310 CTGGGTGTAAGGCTGCTCATA 59.514 52.381 0.00 0.00 0.00 2.15
424 425 0.254178 CTGGGTGTAAGGCTGCTCAT 59.746 55.000 0.00 0.00 0.00 2.90
425 426 1.679311 CTGGGTGTAAGGCTGCTCA 59.321 57.895 0.00 0.00 0.00 4.26
426 427 1.746991 GCTGGGTGTAAGGCTGCTC 60.747 63.158 0.00 0.00 0.00 4.26
427 428 2.352805 GCTGGGTGTAAGGCTGCT 59.647 61.111 0.00 0.00 0.00 4.24
428 429 2.751837 GGCTGGGTGTAAGGCTGC 60.752 66.667 0.00 0.00 37.26 5.25
431 432 2.272471 GGAGGCTGGGTGTAAGGC 59.728 66.667 0.00 0.00 40.39 4.35
432 433 1.497309 TTGGGAGGCTGGGTGTAAGG 61.497 60.000 0.00 0.00 0.00 2.69
433 434 0.404040 TTTGGGAGGCTGGGTGTAAG 59.596 55.000 0.00 0.00 0.00 2.34
434 435 0.111639 GTTTGGGAGGCTGGGTGTAA 59.888 55.000 0.00 0.00 0.00 2.41
435 436 1.765074 GTTTGGGAGGCTGGGTGTA 59.235 57.895 0.00 0.00 0.00 2.90
436 437 2.520968 GTTTGGGAGGCTGGGTGT 59.479 61.111 0.00 0.00 0.00 4.16
437 438 2.283173 GGTTTGGGAGGCTGGGTG 60.283 66.667 0.00 0.00 0.00 4.61
438 439 1.739608 ATTGGTTTGGGAGGCTGGGT 61.740 55.000 0.00 0.00 0.00 4.51
439 440 1.079073 ATTGGTTTGGGAGGCTGGG 59.921 57.895 0.00 0.00 0.00 4.45
440 441 1.891722 GCATTGGTTTGGGAGGCTGG 61.892 60.000 0.00 0.00 0.00 4.85
441 442 1.186917 TGCATTGGTTTGGGAGGCTG 61.187 55.000 0.00 0.00 0.00 4.85
442 443 1.155859 TGCATTGGTTTGGGAGGCT 59.844 52.632 0.00 0.00 0.00 4.58
443 444 1.293179 GTGCATTGGTTTGGGAGGC 59.707 57.895 0.00 0.00 0.00 4.70
444 445 1.178534 ACGTGCATTGGTTTGGGAGG 61.179 55.000 0.00 0.00 0.00 4.30
445 446 0.039256 CACGTGCATTGGTTTGGGAG 60.039 55.000 0.82 0.00 0.00 4.30
446 447 0.753479 ACACGTGCATTGGTTTGGGA 60.753 50.000 17.22 0.00 0.00 4.37
447 448 0.318614 GACACGTGCATTGGTTTGGG 60.319 55.000 17.22 0.00 0.00 4.12
448 449 0.318614 GGACACGTGCATTGGTTTGG 60.319 55.000 17.22 0.00 0.00 3.28
449 450 0.383590 TGGACACGTGCATTGGTTTG 59.616 50.000 17.22 0.00 0.00 2.93
450 451 1.327303 ATGGACACGTGCATTGGTTT 58.673 45.000 17.22 0.00 38.53 3.27
451 452 1.810151 GTATGGACACGTGCATTGGTT 59.190 47.619 17.22 0.00 41.85 3.67
452 453 1.003118 AGTATGGACACGTGCATTGGT 59.997 47.619 17.22 0.00 41.85 3.67
453 454 1.737838 AGTATGGACACGTGCATTGG 58.262 50.000 17.22 0.00 41.85 3.16
454 455 2.741517 TGAAGTATGGACACGTGCATTG 59.258 45.455 17.22 0.00 41.85 2.82
455 456 3.052455 TGAAGTATGGACACGTGCATT 57.948 42.857 17.22 0.00 41.85 3.56
456 457 2.760634 TGAAGTATGGACACGTGCAT 57.239 45.000 17.22 14.31 44.01 3.96
457 458 2.760634 ATGAAGTATGGACACGTGCA 57.239 45.000 17.22 6.92 34.81 4.57
458 459 3.123804 CCTATGAAGTATGGACACGTGC 58.876 50.000 17.22 8.51 0.00 5.34
459 460 3.123804 GCCTATGAAGTATGGACACGTG 58.876 50.000 15.48 15.48 0.00 4.49
460 461 2.102588 GGCCTATGAAGTATGGACACGT 59.897 50.000 0.00 0.00 0.00 4.49
461 462 2.548067 GGGCCTATGAAGTATGGACACG 60.548 54.545 0.84 0.00 0.00 4.49
462 463 2.224548 GGGGCCTATGAAGTATGGACAC 60.225 54.545 0.84 0.00 0.00 3.67
463 464 2.054799 GGGGCCTATGAAGTATGGACA 58.945 52.381 0.84 0.00 0.00 4.02
464 465 1.351350 GGGGGCCTATGAAGTATGGAC 59.649 57.143 0.84 0.00 0.00 4.02
465 466 1.742308 GGGGGCCTATGAAGTATGGA 58.258 55.000 0.84 0.00 0.00 3.41
481 482 2.276740 GCAGATTGGGACTGGGGG 59.723 66.667 0.00 0.00 36.09 5.40
482 483 2.153898 TTGGCAGATTGGGACTGGGG 62.154 60.000 0.00 0.00 36.09 4.96
483 484 0.682209 CTTGGCAGATTGGGACTGGG 60.682 60.000 0.00 0.00 36.09 4.45
484 485 0.038744 ACTTGGCAGATTGGGACTGG 59.961 55.000 0.00 0.00 36.09 4.00
485 486 1.171308 CACTTGGCAGATTGGGACTG 58.829 55.000 0.00 0.00 38.27 3.51
486 487 1.004044 CTCACTTGGCAGATTGGGACT 59.996 52.381 0.00 0.00 0.00 3.85
487 488 1.457346 CTCACTTGGCAGATTGGGAC 58.543 55.000 0.00 0.00 0.00 4.46
488 489 0.322816 GCTCACTTGGCAGATTGGGA 60.323 55.000 0.00 0.00 0.00 4.37
489 490 0.609957 TGCTCACTTGGCAGATTGGG 60.610 55.000 0.00 0.00 34.56 4.12
490 491 1.250328 TTGCTCACTTGGCAGATTGG 58.750 50.000 0.00 0.00 40.90 3.16
491 492 3.054878 GTTTTGCTCACTTGGCAGATTG 58.945 45.455 0.00 0.00 40.90 2.67
492 493 2.961062 AGTTTTGCTCACTTGGCAGATT 59.039 40.909 0.00 0.00 40.90 2.40
493 494 2.295349 CAGTTTTGCTCACTTGGCAGAT 59.705 45.455 0.00 0.00 40.90 2.90
494 495 1.677576 CAGTTTTGCTCACTTGGCAGA 59.322 47.619 0.00 0.00 40.90 4.26
495 496 1.677576 TCAGTTTTGCTCACTTGGCAG 59.322 47.619 0.00 0.00 40.90 4.85
496 497 1.761449 TCAGTTTTGCTCACTTGGCA 58.239 45.000 0.00 0.00 37.97 4.92
497 498 2.544486 CCTTCAGTTTTGCTCACTTGGC 60.544 50.000 0.00 0.00 0.00 4.52
498 499 2.544486 GCCTTCAGTTTTGCTCACTTGG 60.544 50.000 0.00 0.00 0.00 3.61
499 500 2.099592 TGCCTTCAGTTTTGCTCACTTG 59.900 45.455 0.00 0.00 0.00 3.16
500 501 2.378038 TGCCTTCAGTTTTGCTCACTT 58.622 42.857 0.00 0.00 0.00 3.16
501 502 2.057137 TGCCTTCAGTTTTGCTCACT 57.943 45.000 0.00 0.00 0.00 3.41
502 503 2.869233 TTGCCTTCAGTTTTGCTCAC 57.131 45.000 0.00 0.00 0.00 3.51
503 504 4.584325 AGTTATTGCCTTCAGTTTTGCTCA 59.416 37.500 0.00 0.00 0.00 4.26
504 505 5.126396 AGTTATTGCCTTCAGTTTTGCTC 57.874 39.130 0.00 0.00 0.00 4.26
505 506 5.509670 GGAAGTTATTGCCTTCAGTTTTGCT 60.510 40.000 0.00 0.00 40.06 3.91
506 507 4.686091 GGAAGTTATTGCCTTCAGTTTTGC 59.314 41.667 0.00 0.00 40.06 3.68
507 508 5.230182 GGGAAGTTATTGCCTTCAGTTTTG 58.770 41.667 0.00 0.00 43.32 2.44
508 509 4.283467 GGGGAAGTTATTGCCTTCAGTTTT 59.717 41.667 0.00 0.00 45.80 2.43
509 510 3.832490 GGGGAAGTTATTGCCTTCAGTTT 59.168 43.478 0.00 0.00 45.80 2.66
510 511 3.431415 GGGGAAGTTATTGCCTTCAGTT 58.569 45.455 0.00 0.00 45.80 3.16
511 512 2.291605 GGGGGAAGTTATTGCCTTCAGT 60.292 50.000 0.00 0.00 45.80 3.41
512 513 2.379005 GGGGGAAGTTATTGCCTTCAG 58.621 52.381 0.00 0.00 45.80 3.02
513 514 1.340600 CGGGGGAAGTTATTGCCTTCA 60.341 52.381 0.00 0.00 45.80 3.02
514 515 1.389555 CGGGGGAAGTTATTGCCTTC 58.610 55.000 0.00 0.00 45.80 3.46
515 516 0.683179 GCGGGGGAAGTTATTGCCTT 60.683 55.000 0.00 0.00 45.80 4.35
516 517 1.076995 GCGGGGGAAGTTATTGCCT 60.077 57.895 0.00 0.00 45.80 4.75
517 518 0.968393 TTGCGGGGGAAGTTATTGCC 60.968 55.000 0.00 0.00 45.80 4.52
518 519 0.892063 TTTGCGGGGGAAGTTATTGC 59.108 50.000 0.00 0.00 0.00 3.56
519 520 3.317993 CCTATTTGCGGGGGAAGTTATTG 59.682 47.826 0.00 0.00 0.00 1.90
520 521 3.562182 CCTATTTGCGGGGGAAGTTATT 58.438 45.455 0.00 0.00 0.00 1.40
521 522 2.158519 CCCTATTTGCGGGGGAAGTTAT 60.159 50.000 0.00 0.00 42.58 1.89
522 523 1.213430 CCCTATTTGCGGGGGAAGTTA 59.787 52.381 0.00 0.00 42.58 2.24
523 524 0.033503 CCCTATTTGCGGGGGAAGTT 60.034 55.000 0.00 0.00 42.58 2.66
524 525 1.613061 CCCTATTTGCGGGGGAAGT 59.387 57.895 0.00 0.00 42.58 3.01
525 526 4.579127 CCCTATTTGCGGGGGAAG 57.421 61.111 0.00 0.00 42.58 3.46
534 535 4.037089 GGGTATTACGCAAACCCCTATTTG 59.963 45.833 6.04 0.00 46.12 2.32
535 536 4.209538 GGGTATTACGCAAACCCCTATTT 58.790 43.478 6.04 0.00 46.12 1.40
536 537 3.824133 GGGTATTACGCAAACCCCTATT 58.176 45.455 6.04 0.00 46.12 1.73
537 538 3.497103 GGGTATTACGCAAACCCCTAT 57.503 47.619 6.04 0.00 46.12 2.57
539 540 3.888424 GGGTATTACGCAAACCCCT 57.112 52.632 6.04 0.00 46.12 4.79
542 543 4.075963 TGATAGGGGTATTACGCAAACC 57.924 45.455 12.33 0.00 32.03 3.27
543 544 8.036575 TGTATATGATAGGGGTATTACGCAAAC 58.963 37.037 12.33 0.93 32.03 2.93
544 545 8.136563 TGTATATGATAGGGGTATTACGCAAA 57.863 34.615 12.33 0.95 32.03 3.68
545 546 7.721409 TGTATATGATAGGGGTATTACGCAA 57.279 36.000 12.33 1.27 32.03 4.85
546 547 7.147794 CCTTGTATATGATAGGGGTATTACGCA 60.148 40.741 12.33 0.00 32.03 5.24
547 548 7.208080 CCTTGTATATGATAGGGGTATTACGC 58.792 42.308 2.40 2.40 0.00 4.42
548 549 7.723324 CCCTTGTATATGATAGGGGTATTACG 58.277 42.308 9.07 0.00 43.04 3.18
549 550 9.054580 AACCCTTGTATATGATAGGGGTATTAC 57.945 37.037 17.34 0.00 46.08 1.89
551 552 9.638110 TTAACCCTTGTATATGATAGGGGTATT 57.362 33.333 17.34 8.86 46.08 1.89
552 553 9.814219 ATTAACCCTTGTATATGATAGGGGTAT 57.186 33.333 17.34 9.10 46.08 2.73
553 554 9.638110 AATTAACCCTTGTATATGATAGGGGTA 57.362 33.333 17.34 13.87 46.08 3.69
564 565 9.138596 GGCAAAAGGATAATTAACCCTTGTATA 57.861 33.333 17.93 0.00 39.97 1.47
565 566 7.070696 GGGCAAAAGGATAATTAACCCTTGTAT 59.929 37.037 17.93 8.99 39.97 2.29
566 567 6.381707 GGGCAAAAGGATAATTAACCCTTGTA 59.618 38.462 17.93 0.00 39.97 2.41
595 596 4.431416 AAACTGAGTACATGGACACCAA 57.569 40.909 11.55 0.00 36.95 3.67
622 623 0.448990 TGAGCACAATTCGCATCTGC 59.551 50.000 0.00 0.00 37.78 4.26
816 817 0.833949 TATAGCACACCCGCCAATGA 59.166 50.000 0.00 0.00 0.00 2.57
818 819 3.326588 TCTTATATAGCACACCCGCCAAT 59.673 43.478 0.00 0.00 0.00 3.16
1088 1096 1.201429 AACCCTCTGATCAACGCCCT 61.201 55.000 0.00 0.00 0.00 5.19
1100 1108 0.969894 CGGTGTCTGAGAAACCCTCT 59.030 55.000 16.02 0.00 36.63 3.69
1198 1206 4.038271 TCAACCCATTGCTCAAAGATCT 57.962 40.909 0.00 0.00 35.63 2.75
1255 1263 0.960364 GCCAGAGCATCGACCCAAAA 60.960 55.000 0.00 0.00 42.67 2.44
1349 1357 0.456221 TTCTTCCGGAGCTCGTGATC 59.544 55.000 3.34 0.00 37.11 2.92
1351 1359 1.595993 CCTTCTTCCGGAGCTCGTGA 61.596 60.000 3.34 3.50 37.11 4.35
1388 1396 1.818060 CAGCTAGCTCTCTGTCAGTGT 59.182 52.381 16.15 0.00 0.00 3.55
1489 1497 5.526111 GTGCGATTACCATACCTACAAATGT 59.474 40.000 0.00 0.00 0.00 2.71
1728 1738 3.297134 TTTTGGACAGAAAGGCAGAGT 57.703 42.857 0.00 0.00 0.00 3.24
1761 1773 0.962356 ACGCTCTGAATTTGGCCCAG 60.962 55.000 0.00 0.00 0.00 4.45
1836 1848 4.455877 CAGAAAAATACGCAAGAGAACCCT 59.544 41.667 0.00 0.00 43.62 4.34
1892 1904 7.531857 TTCCACAAAAAGTTCCAGCATTATA 57.468 32.000 0.00 0.00 0.00 0.98
2223 2237 5.009610 GTCAAAGTCTTGCCATTTGTCCTAA 59.990 40.000 0.00 0.00 35.80 2.69
2249 2263 4.413760 TGTATACCTTCCTTCCCTATCCG 58.586 47.826 0.00 0.00 0.00 4.18
2438 2456 2.154462 CCTAAACCAAGTGCCACTCTG 58.846 52.381 0.00 0.00 0.00 3.35
2526 2544 5.124036 TCATTAATGAAAATCGGAGGGGT 57.876 39.130 15.82 0.00 33.08 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.