Multiple sequence alignment - TraesCS4A01G349900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G349900 chr4A 100.000 3303 0 0 1 3303 626337150 626340452 0.000000e+00 6100.0
1 TraesCS4A01G349900 chr4A 78.080 1104 226 12 2204 3303 531075866 531074775 0.000000e+00 684.0
2 TraesCS4A01G349900 chr4A 80.556 396 46 14 439 812 637818101 637818487 3.250000e-70 276.0
3 TraesCS4A01G349900 chr4A 78.230 418 52 20 439 825 647183957 647183548 7.130000e-57 231.0
4 TraesCS4A01G349900 chr4A 75.121 414 46 28 439 826 606814460 606814078 1.240000e-29 141.0
5 TraesCS4A01G349900 chr4A 79.310 174 18 9 674 830 730275680 730275508 4.510000e-19 106.0
6 TraesCS4A01G349900 chr4A 72.789 441 56 29 439 833 730882302 730881880 1.260000e-14 91.6
7 TraesCS4A01G349900 chr5B 94.097 2541 78 29 819 3303 683340027 683342551 0.000000e+00 3795.0
8 TraesCS4A01G349900 chr5B 78.311 438 63 13 2 418 683339572 683339998 1.520000e-63 254.0
9 TraesCS4A01G349900 chr5D 93.831 2156 85 26 1193 3303 542664457 542662305 0.000000e+00 3201.0
10 TraesCS4A01G349900 chr5D 87.895 190 21 1 960 1149 542664652 542664465 4.290000e-54 222.0
11 TraesCS4A01G349900 chr5D 80.930 215 20 3 625 818 444359656 444359442 2.050000e-32 150.0
12 TraesCS4A01G349900 chr4D 77.647 1105 229 14 2204 3303 65114101 65113010 0.000000e+00 656.0
13 TraesCS4A01G349900 chr5A 83.951 405 38 14 439 818 16995049 16994647 2.420000e-96 363.0
14 TraesCS4A01G349900 chr5A 79.361 407 50 14 439 818 569282212 569282611 4.230000e-64 255.0
15 TraesCS4A01G349900 chr5A 77.435 421 48 17 439 819 118755633 118756046 1.200000e-49 207.0
16 TraesCS4A01G349900 chr5A 75.000 436 57 23 439 832 34752990 34752565 1.590000e-33 154.0
17 TraesCS4A01G349900 chr7D 81.618 408 45 12 439 819 136297543 136297947 8.900000e-81 311.0
18 TraesCS4A01G349900 chr7D 76.755 413 52 20 439 825 388131675 388132069 1.210000e-44 191.0
19 TraesCS4A01G349900 chr7D 83.744 203 28 5 48 246 294010701 294010902 1.560000e-43 187.0
20 TraesCS4A01G349900 chr7D 94.737 57 3 0 767 823 41506354 41506410 4.540000e-14 89.8
21 TraesCS4A01G349900 chr7B 79.653 403 48 22 439 818 683456903 683456512 3.270000e-65 259.0
22 TraesCS4A01G349900 chr3A 79.798 396 48 20 439 811 393965653 393965267 3.270000e-65 259.0
23 TraesCS4A01G349900 chr3A 75.765 425 55 28 439 818 688896005 688896426 1.580000e-38 171.0
24 TraesCS4A01G349900 chr2D 79.853 407 39 23 439 822 36547555 36547941 1.180000e-64 257.0
25 TraesCS4A01G349900 chr2D 78.481 395 52 16 439 811 516361421 516361038 9.220000e-56 228.0
26 TraesCS4A01G349900 chr7A 78.571 406 54 17 439 818 474531197 474531595 1.530000e-58 237.0
27 TraesCS4A01G349900 chr7A 78.111 434 37 27 439 818 283157623 283157194 4.290000e-54 222.0
28 TraesCS4A01G349900 chr7A 79.811 317 30 19 528 823 92859136 92858833 2.010000e-47 200.0
29 TraesCS4A01G349900 chr6D 80.503 318 49 12 439 751 461631965 461632274 7.130000e-57 231.0
30 TraesCS4A01G349900 chr6D 84.112 214 31 3 1 213 58463470 58463681 1.550000e-48 204.0
31 TraesCS4A01G349900 chr6D 80.105 191 21 5 645 819 396538779 396538968 3.460000e-25 126.0
32 TraesCS4A01G349900 chr3B 76.060 401 58 21 447 825 712526501 712526117 1.220000e-39 174.0
33 TraesCS4A01G349900 chr1A 78.495 186 26 11 70 243 524124439 524124256 3.480000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G349900 chr4A 626337150 626340452 3302 False 6100.0 6100 100.000 1 3303 1 chr4A.!!$F1 3302
1 TraesCS4A01G349900 chr4A 531074775 531075866 1091 True 684.0 684 78.080 2204 3303 1 chr4A.!!$R1 1099
2 TraesCS4A01G349900 chr5B 683339572 683342551 2979 False 2024.5 3795 86.204 2 3303 2 chr5B.!!$F1 3301
3 TraesCS4A01G349900 chr5D 542662305 542664652 2347 True 1711.5 3201 90.863 960 3303 2 chr5D.!!$R2 2343
4 TraesCS4A01G349900 chr4D 65113010 65114101 1091 True 656.0 656 77.647 2204 3303 1 chr4D.!!$R1 1099

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
760 786 0.023732 CGCGACATGTGACGAATGTC 59.976 55.0 1.15 6.1 46.85 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2312 2399 0.181114 TCACCACAACTCTGCTGCTT 59.819 50.0 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.945354 GCAGTCGGCCTGTAGTAGCA 61.945 60.000 0.00 0.00 43.55 3.49
32 33 0.101399 CAGTCGGCCTGTAGTAGCAG 59.899 60.000 0.00 0.00 36.37 4.24
36 37 1.133761 TCGGCCTGTAGTAGCAGAGAT 60.134 52.381 0.00 0.00 38.70 2.75
38 39 2.311463 GGCCTGTAGTAGCAGAGATGA 58.689 52.381 0.00 0.00 38.70 2.92
43 44 3.356290 TGTAGTAGCAGAGATGAGTGCA 58.644 45.455 0.00 0.00 42.47 4.57
75 76 1.742880 CAGCATGAGGTGGACGGTG 60.743 63.158 0.00 0.00 39.69 4.94
80 81 2.032071 GAGGTGGACGGTGTTGGG 59.968 66.667 0.00 0.00 0.00 4.12
82 83 2.193786 GGTGGACGGTGTTGGGTT 59.806 61.111 0.00 0.00 0.00 4.11
83 84 1.895231 GGTGGACGGTGTTGGGTTC 60.895 63.158 0.00 0.00 0.00 3.62
90 91 1.074248 GGTGTTGGGTTCGATGGGT 59.926 57.895 0.00 0.00 0.00 4.51
95 96 2.818274 GGGTTCGATGGGTGTCGC 60.818 66.667 0.00 0.00 41.22 5.19
123 124 2.086869 CGTGGTTTCTCTAGTACCGGA 58.913 52.381 9.46 0.00 34.62 5.14
149 150 4.110036 ACAAAGAAAGCTCACAAACACC 57.890 40.909 0.00 0.00 0.00 4.16
165 167 0.322456 CACCGGCAAGAATCCTCCAA 60.322 55.000 0.00 0.00 0.00 3.53
170 172 1.895131 GGCAAGAATCCTCCAAAAGCA 59.105 47.619 0.00 0.00 0.00 3.91
178 180 2.034066 TCCAAAAGCAGGCGAGGG 59.966 61.111 0.00 0.00 0.00 4.30
179 181 3.064324 CCAAAAGCAGGCGAGGGG 61.064 66.667 0.00 0.00 0.00 4.79
180 182 3.752339 CAAAAGCAGGCGAGGGGC 61.752 66.667 0.00 0.00 42.51 5.80
201 203 1.714899 GGGGATTTGTGTCGATGCGG 61.715 60.000 0.00 0.00 0.00 5.69
230 232 3.948719 GGTGGTCGGCCTGGACAA 61.949 66.667 7.97 0.00 38.70 3.18
232 234 3.164977 TGGTCGGCCTGGACAACA 61.165 61.111 7.97 0.00 38.70 3.33
234 236 1.966451 GGTCGGCCTGGACAACAAG 60.966 63.158 12.20 0.00 38.70 3.16
236 238 2.144078 TCGGCCTGGACAACAAGGA 61.144 57.895 0.00 0.00 0.00 3.36
237 239 1.672356 CGGCCTGGACAACAAGGAG 60.672 63.158 0.00 0.00 0.00 3.69
238 240 1.973812 GGCCTGGACAACAAGGAGC 60.974 63.158 0.00 0.00 0.00 4.70
239 241 2.328099 GCCTGGACAACAAGGAGCG 61.328 63.158 0.00 0.00 0.00 5.03
240 242 1.672356 CCTGGACAACAAGGAGCGG 60.672 63.158 0.00 0.00 0.00 5.52
241 243 2.281484 TGGACAACAAGGAGCGGC 60.281 61.111 0.00 0.00 0.00 6.53
243 245 3.423154 GACAACAAGGAGCGGCCG 61.423 66.667 24.05 24.05 43.43 6.13
244 246 3.876589 GACAACAAGGAGCGGCCGA 62.877 63.158 33.48 0.00 43.43 5.54
246 248 2.040544 CAACAAGGAGCGGCCGAAT 61.041 57.895 33.48 17.60 43.43 3.34
253 271 1.352056 GAGCGGCCGAATACTTTGC 59.648 57.895 33.48 7.47 0.00 3.68
256 274 4.211986 GGCCGAATACTTTGCCGA 57.788 55.556 0.00 0.00 33.59 5.54
276 294 4.106925 GGCAGGGGAGAGGTGCAG 62.107 72.222 0.00 0.00 39.05 4.41
281 299 4.106925 GGGAGAGGTGCAGGCCAG 62.107 72.222 5.01 0.00 0.00 4.85
294 316 2.012794 GGCCAGGGAAGGGGGTATT 61.013 63.158 0.00 0.00 0.00 1.89
297 319 1.688311 GCCAGGGAAGGGGGTATTTTC 60.688 57.143 0.00 0.00 0.00 2.29
327 349 1.380380 GGCCCATGGGAGGACAAAG 60.380 63.158 36.00 4.56 37.50 2.77
329 351 0.394899 GCCCATGGGAGGACAAAGAG 60.395 60.000 36.00 3.15 37.50 2.85
333 355 3.107601 CCATGGGAGGACAAAGAGAGTA 58.892 50.000 2.85 0.00 0.00 2.59
335 357 3.544698 TGGGAGGACAAAGAGAGTACT 57.455 47.619 0.00 0.00 31.34 2.73
336 358 3.432378 TGGGAGGACAAAGAGAGTACTC 58.568 50.000 15.41 15.41 44.54 2.59
337 359 2.424246 GGGAGGACAAAGAGAGTACTCG 59.576 54.545 17.07 5.27 45.90 4.18
338 360 2.159352 GGAGGACAAAGAGAGTACTCGC 60.159 54.545 17.90 17.90 45.90 5.03
339 361 1.469308 AGGACAAAGAGAGTACTCGCG 59.531 52.381 19.19 0.00 46.64 5.87
340 362 1.199558 GGACAAAGAGAGTACTCGCGT 59.800 52.381 19.19 14.37 46.64 6.01
341 363 2.243407 GACAAAGAGAGTACTCGCGTG 58.757 52.381 22.54 22.54 46.64 5.34
342 364 0.985549 CAAAGAGAGTACTCGCGTGC 59.014 55.000 19.19 7.58 46.64 5.34
343 365 0.454620 AAAGAGAGTACTCGCGTGCG 60.455 55.000 19.19 8.14 46.64 5.34
344 366 1.575576 AAGAGAGTACTCGCGTGCGT 61.576 55.000 19.19 4.79 46.64 5.24
345 367 1.154263 GAGAGTACTCGCGTGCGTT 60.154 57.895 17.07 5.32 40.74 4.84
365 387 1.683790 CGCGTCCTGTCCATTTCGAC 61.684 60.000 0.00 0.00 0.00 4.20
373 395 1.058057 GTCCATTTCGACGCAAACGC 61.058 55.000 0.00 0.00 45.53 4.84
374 396 1.082431 CCATTTCGACGCAAACGCA 60.082 52.632 0.00 0.00 45.53 5.24
378 400 2.649843 TTTCGACGCAAACGCAACCC 62.650 55.000 0.00 0.00 45.53 4.11
387 409 3.385577 GCAAACGCAACCCAATTTTAGA 58.614 40.909 0.00 0.00 0.00 2.10
391 413 1.807742 CGCAACCCAATTTTAGACCGA 59.192 47.619 0.00 0.00 0.00 4.69
396 418 6.391537 GCAACCCAATTTTAGACCGAAAATA 58.608 36.000 2.20 0.00 37.91 1.40
398 420 6.769134 ACCCAATTTTAGACCGAAAATAGG 57.231 37.500 11.87 11.87 37.91 2.57
401 423 7.889600 ACCCAATTTTAGACCGAAAATAGGTTA 59.110 33.333 12.68 0.00 43.01 2.85
405 427 9.729281 AATTTTAGACCGAAAATAGGTTAGACA 57.271 29.630 2.20 0.00 43.01 3.41
428 454 2.536761 AACGAACACTCATTTCCGGA 57.463 45.000 0.00 0.00 0.00 5.14
432 458 2.767505 GAACACTCATTTCCGGACACT 58.232 47.619 1.83 0.00 0.00 3.55
434 460 1.691976 ACACTCATTTCCGGACACTCA 59.308 47.619 1.83 0.00 0.00 3.41
437 463 3.753272 CACTCATTTCCGGACACTCATTT 59.247 43.478 1.83 0.00 0.00 2.32
438 464 4.935205 CACTCATTTCCGGACACTCATTTA 59.065 41.667 1.83 0.00 0.00 1.40
439 465 5.411361 CACTCATTTCCGGACACTCATTTAA 59.589 40.000 1.83 0.00 0.00 1.52
440 466 5.643777 ACTCATTTCCGGACACTCATTTAAG 59.356 40.000 1.83 0.00 0.00 1.85
441 467 4.394920 TCATTTCCGGACACTCATTTAAGC 59.605 41.667 1.83 0.00 0.00 3.09
442 468 3.410631 TTCCGGACACTCATTTAAGCA 57.589 42.857 1.83 0.00 0.00 3.91
443 469 2.695359 TCCGGACACTCATTTAAGCAC 58.305 47.619 0.00 0.00 0.00 4.40
444 470 2.037902 TCCGGACACTCATTTAAGCACA 59.962 45.455 0.00 0.00 0.00 4.57
445 471 2.811431 CCGGACACTCATTTAAGCACAA 59.189 45.455 0.00 0.00 0.00 3.33
446 472 3.364964 CCGGACACTCATTTAAGCACAAC 60.365 47.826 0.00 0.00 0.00 3.32
447 473 3.364964 CGGACACTCATTTAAGCACAACC 60.365 47.826 0.00 0.00 0.00 3.77
448 474 3.364964 GGACACTCATTTAAGCACAACCG 60.365 47.826 0.00 0.00 0.00 4.44
449 475 3.211045 ACACTCATTTAAGCACAACCGT 58.789 40.909 0.00 0.00 0.00 4.83
450 476 3.003275 ACACTCATTTAAGCACAACCGTG 59.997 43.478 0.00 0.00 46.56 4.94
458 484 3.414700 CACAACCGTGCCTCTCGC 61.415 66.667 0.00 0.00 36.06 5.03
475 501 4.914291 CGGAAGCAAAACCGTGAC 57.086 55.556 0.00 0.00 43.53 3.67
476 502 2.317230 CGGAAGCAAAACCGTGACT 58.683 52.632 0.00 0.00 43.53 3.41
477 503 0.234884 CGGAAGCAAAACCGTGACTC 59.765 55.000 0.00 0.00 43.53 3.36
478 504 1.594331 GGAAGCAAAACCGTGACTCT 58.406 50.000 0.00 0.00 0.00 3.24
479 505 1.531578 GGAAGCAAAACCGTGACTCTC 59.468 52.381 0.00 0.00 0.00 3.20
480 506 2.210116 GAAGCAAAACCGTGACTCTCA 58.790 47.619 0.00 0.00 0.00 3.27
481 507 1.583054 AGCAAAACCGTGACTCTCAC 58.417 50.000 0.00 0.00 43.65 3.51
539 565 2.050351 ACGGTCGTGACTCTTGCG 60.050 61.111 0.00 0.00 0.00 4.85
540 566 2.805353 CGGTCGTGACTCTTGCGG 60.805 66.667 0.00 0.00 0.00 5.69
541 567 2.649034 GGTCGTGACTCTTGCGGA 59.351 61.111 0.00 0.00 0.00 5.54
542 568 1.006571 GGTCGTGACTCTTGCGGAA 60.007 57.895 0.00 0.00 0.00 4.30
543 569 0.599204 GGTCGTGACTCTTGCGGAAA 60.599 55.000 0.00 0.00 0.00 3.13
544 570 1.214367 GTCGTGACTCTTGCGGAAAA 58.786 50.000 0.00 0.00 0.00 2.29
545 571 1.595794 GTCGTGACTCTTGCGGAAAAA 59.404 47.619 0.00 0.00 0.00 1.94
638 664 6.727824 TTTCTGATCGAAAAGCTAAGGAAG 57.272 37.500 9.34 0.00 38.62 3.46
639 665 5.122396 TTTCTGATCGAAAAGCTAAGGAAGC 59.878 40.000 9.34 0.00 42.93 3.86
640 666 7.786190 TTTCTGATCGAAAAGCTAAGGAAGCC 61.786 42.308 9.34 0.00 43.28 4.35
646 672 3.087906 GCTAAGGAAGCCCGGGGA 61.088 66.667 25.28 0.00 46.25 4.81
647 673 2.676265 GCTAAGGAAGCCCGGGGAA 61.676 63.158 25.28 0.00 46.25 3.97
648 674 1.996086 CTAAGGAAGCCCGGGGAAA 59.004 57.895 25.28 0.00 37.58 3.13
649 675 0.330267 CTAAGGAAGCCCGGGGAAAA 59.670 55.000 25.28 0.00 37.58 2.29
650 676 0.038599 TAAGGAAGCCCGGGGAAAAC 59.961 55.000 25.28 4.44 37.58 2.43
651 677 2.678934 GGAAGCCCGGGGAAAACC 60.679 66.667 25.28 10.14 39.11 3.27
652 678 2.116556 GAAGCCCGGGGAAAACCA 59.883 61.111 25.28 0.00 42.91 3.67
653 679 1.532078 GAAGCCCGGGGAAAACCAA 60.532 57.895 25.28 0.00 42.91 3.67
654 680 1.075151 AAGCCCGGGGAAAACCAAA 60.075 52.632 25.28 0.00 42.91 3.28
655 681 0.691413 AAGCCCGGGGAAAACCAAAA 60.691 50.000 25.28 0.00 42.91 2.44
656 682 0.472925 AGCCCGGGGAAAACCAAAAT 60.473 50.000 25.28 0.00 42.91 1.82
657 683 0.321210 GCCCGGGGAAAACCAAAATG 60.321 55.000 25.28 0.00 42.91 2.32
658 684 1.343069 CCCGGGGAAAACCAAAATGA 58.657 50.000 14.71 0.00 42.91 2.57
659 685 1.905894 CCCGGGGAAAACCAAAATGAT 59.094 47.619 14.71 0.00 42.91 2.45
660 686 3.100671 CCCGGGGAAAACCAAAATGATA 58.899 45.455 14.71 0.00 42.91 2.15
661 687 3.515901 CCCGGGGAAAACCAAAATGATAA 59.484 43.478 14.71 0.00 42.91 1.75
662 688 4.020128 CCCGGGGAAAACCAAAATGATAAA 60.020 41.667 14.71 0.00 42.91 1.40
663 689 5.513267 CCCGGGGAAAACCAAAATGATAAAA 60.513 40.000 14.71 0.00 42.91 1.52
664 690 5.998363 CCGGGGAAAACCAAAATGATAAAAA 59.002 36.000 0.00 0.00 42.91 1.94
697 723 6.477669 AAAAACCGTTTAAAAAGCCGAAAA 57.522 29.167 0.00 0.00 0.00 2.29
698 724 6.665474 AAAACCGTTTAAAAAGCCGAAAAT 57.335 29.167 0.00 0.00 0.00 1.82
699 725 5.644902 AACCGTTTAAAAAGCCGAAAATG 57.355 34.783 0.00 0.00 0.00 2.32
700 726 3.491639 ACCGTTTAAAAAGCCGAAAATGC 59.508 39.130 0.00 0.00 0.00 3.56
701 727 3.421184 CCGTTTAAAAAGCCGAAAATGCG 60.421 43.478 0.00 0.00 0.00 4.73
702 728 3.180782 CGTTTAAAAAGCCGAAAATGCGT 59.819 39.130 0.00 0.00 0.00 5.24
703 729 4.441825 GTTTAAAAAGCCGAAAATGCGTG 58.558 39.130 0.00 0.00 0.00 5.34
704 730 2.217429 AAAAAGCCGAAAATGCGTGT 57.783 40.000 0.00 0.00 0.00 4.49
705 731 1.486439 AAAAGCCGAAAATGCGTGTG 58.514 45.000 0.00 0.00 0.00 3.82
706 732 0.665835 AAAGCCGAAAATGCGTGTGA 59.334 45.000 0.00 0.00 0.00 3.58
707 733 0.665835 AAGCCGAAAATGCGTGTGAA 59.334 45.000 0.00 0.00 0.00 3.18
708 734 0.665835 AGCCGAAAATGCGTGTGAAA 59.334 45.000 0.00 0.00 0.00 2.69
709 735 1.066303 AGCCGAAAATGCGTGTGAAAA 59.934 42.857 0.00 0.00 0.00 2.29
710 736 1.855360 GCCGAAAATGCGTGTGAAAAA 59.145 42.857 0.00 0.00 0.00 1.94
711 737 2.097444 GCCGAAAATGCGTGTGAAAAAG 60.097 45.455 0.00 0.00 0.00 2.27
712 738 3.367607 CCGAAAATGCGTGTGAAAAAGA 58.632 40.909 0.00 0.00 0.00 2.52
713 739 3.794028 CCGAAAATGCGTGTGAAAAAGAA 59.206 39.130 0.00 0.00 0.00 2.52
714 740 4.266502 CCGAAAATGCGTGTGAAAAAGAAA 59.733 37.500 0.00 0.00 0.00 2.52
715 741 5.220303 CCGAAAATGCGTGTGAAAAAGAAAA 60.220 36.000 0.00 0.00 0.00 2.29
716 742 5.666454 CGAAAATGCGTGTGAAAAAGAAAAC 59.334 36.000 0.00 0.00 0.00 2.43
717 743 6.473397 AAAATGCGTGTGAAAAAGAAAACA 57.527 29.167 0.00 0.00 0.00 2.83
718 744 6.473397 AAATGCGTGTGAAAAAGAAAACAA 57.527 29.167 0.00 0.00 0.00 2.83
719 745 6.473397 AATGCGTGTGAAAAAGAAAACAAA 57.527 29.167 0.00 0.00 0.00 2.83
720 746 5.907197 TGCGTGTGAAAAAGAAAACAAAA 57.093 30.435 0.00 0.00 0.00 2.44
721 747 6.473397 TGCGTGTGAAAAAGAAAACAAAAT 57.527 29.167 0.00 0.00 0.00 1.82
722 748 6.892691 TGCGTGTGAAAAAGAAAACAAAATT 58.107 28.000 0.00 0.00 0.00 1.82
723 749 7.012358 TGCGTGTGAAAAAGAAAACAAAATTC 58.988 30.769 0.00 0.00 0.00 2.17
724 750 6.190154 GCGTGTGAAAAAGAAAACAAAATTCG 59.810 34.615 0.00 0.00 32.04 3.34
725 751 7.441072 CGTGTGAAAAAGAAAACAAAATTCGA 58.559 30.769 0.00 0.00 32.04 3.71
726 752 7.947299 CGTGTGAAAAAGAAAACAAAATTCGAA 59.053 29.630 0.00 0.00 32.04 3.71
727 753 9.249844 GTGTGAAAAAGAAAACAAAATTCGAAG 57.750 29.630 3.35 0.00 32.04 3.79
728 754 8.439286 TGTGAAAAAGAAAACAAAATTCGAAGG 58.561 29.630 3.35 0.00 32.04 3.46
729 755 7.902917 GTGAAAAAGAAAACAAAATTCGAAGGG 59.097 33.333 3.35 0.00 32.04 3.95
730 756 7.819900 TGAAAAAGAAAACAAAATTCGAAGGGA 59.180 29.630 3.35 0.00 32.04 4.20
731 757 7.770801 AAAAGAAAACAAAATTCGAAGGGAG 57.229 32.000 3.35 0.00 32.04 4.30
732 758 4.871513 AGAAAACAAAATTCGAAGGGAGC 58.128 39.130 3.35 0.00 32.04 4.70
733 759 2.989422 AACAAAATTCGAAGGGAGCG 57.011 45.000 3.35 0.00 0.00 5.03
734 760 1.892209 ACAAAATTCGAAGGGAGCGT 58.108 45.000 3.35 0.00 0.00 5.07
735 761 1.804748 ACAAAATTCGAAGGGAGCGTC 59.195 47.619 3.35 0.00 0.00 5.19
736 762 1.130561 CAAAATTCGAAGGGAGCGTCC 59.869 52.381 3.35 0.00 35.23 4.79
737 763 0.323629 AAATTCGAAGGGAGCGTCCA 59.676 50.000 3.35 0.00 38.64 4.02
738 764 0.108138 AATTCGAAGGGAGCGTCCAG 60.108 55.000 3.35 0.00 38.64 3.86
739 765 0.970937 ATTCGAAGGGAGCGTCCAGA 60.971 55.000 3.35 0.00 38.64 3.86
740 766 1.595993 TTCGAAGGGAGCGTCCAGAG 61.596 60.000 0.00 0.00 38.64 3.35
741 767 2.185608 GAAGGGAGCGTCCAGAGC 59.814 66.667 6.41 0.00 38.64 4.09
742 768 3.708220 GAAGGGAGCGTCCAGAGCG 62.708 68.421 6.41 0.00 38.64 5.03
749 775 3.250323 CGTCCAGAGCGCGACATG 61.250 66.667 12.10 3.76 0.00 3.21
750 776 2.125912 GTCCAGAGCGCGACATGT 60.126 61.111 12.10 0.00 0.00 3.21
751 777 2.125952 TCCAGAGCGCGACATGTG 60.126 61.111 12.10 3.11 0.00 3.21
752 778 2.125952 CCAGAGCGCGACATGTGA 60.126 61.111 12.10 0.00 0.00 3.58
753 779 2.447887 CCAGAGCGCGACATGTGAC 61.448 63.158 12.10 0.00 0.00 3.67
754 780 2.504899 AGAGCGCGACATGTGACG 60.505 61.111 12.10 8.01 36.38 4.35
755 781 2.504026 GAGCGCGACATGTGACGA 60.504 61.111 12.10 0.00 35.37 4.20
756 782 2.049526 AGCGCGACATGTGACGAA 60.050 55.556 12.10 0.00 35.37 3.85
757 783 1.413767 GAGCGCGACATGTGACGAAT 61.414 55.000 12.10 7.81 35.37 3.34
758 784 1.296145 GCGCGACATGTGACGAATG 60.296 57.895 12.10 5.82 35.37 2.67
759 785 1.955529 GCGCGACATGTGACGAATGT 61.956 55.000 12.10 0.00 40.93 2.71
760 786 0.023732 CGCGACATGTGACGAATGTC 59.976 55.000 1.15 6.10 46.85 3.06
765 791 3.838120 GACATGTGACGAATGTCTGAGA 58.162 45.455 1.15 0.00 46.81 3.27
766 792 3.842820 ACATGTGACGAATGTCTGAGAG 58.157 45.455 0.00 0.00 45.70 3.20
767 793 2.354109 TGTGACGAATGTCTGAGAGC 57.646 50.000 0.00 0.00 45.70 4.09
768 794 1.263776 GTGACGAATGTCTGAGAGCG 58.736 55.000 0.00 0.00 45.70 5.03
769 795 0.881796 TGACGAATGTCTGAGAGCGT 59.118 50.000 5.44 5.44 45.70 5.07
770 796 1.269723 TGACGAATGTCTGAGAGCGTT 59.730 47.619 6.88 0.00 45.70 4.84
771 797 1.651138 GACGAATGTCTGAGAGCGTTG 59.349 52.381 6.88 0.00 42.08 4.10
772 798 1.269723 ACGAATGTCTGAGAGCGTTGA 59.730 47.619 0.00 0.00 0.00 3.18
773 799 2.094494 ACGAATGTCTGAGAGCGTTGAT 60.094 45.455 0.00 0.00 0.00 2.57
774 800 2.533535 CGAATGTCTGAGAGCGTTGATC 59.466 50.000 0.00 0.00 0.00 2.92
775 801 2.200792 ATGTCTGAGAGCGTTGATCG 57.799 50.000 0.00 0.00 43.12 3.69
776 802 0.881796 TGTCTGAGAGCGTTGATCGT 59.118 50.000 0.00 0.00 42.13 3.73
777 803 1.269723 TGTCTGAGAGCGTTGATCGTT 59.730 47.619 0.00 0.00 42.13 3.85
778 804 1.651138 GTCTGAGAGCGTTGATCGTTG 59.349 52.381 0.00 0.00 42.13 4.10
779 805 0.368227 CTGAGAGCGTTGATCGTTGC 59.632 55.000 0.00 0.00 42.13 4.17
780 806 1.341802 GAGAGCGTTGATCGTTGCG 59.658 57.895 0.00 0.00 42.13 4.85
781 807 1.071019 GAGAGCGTTGATCGTTGCGA 61.071 55.000 0.00 0.00 42.13 5.10
782 808 1.073216 AGAGCGTTGATCGTTGCGAG 61.073 55.000 0.00 0.00 39.91 5.03
783 809 2.014093 GAGCGTTGATCGTTGCGAGG 62.014 60.000 0.00 0.00 39.91 4.63
784 810 2.395690 CGTTGATCGTTGCGAGGC 59.604 61.111 0.00 0.00 39.91 4.70
785 811 2.094659 CGTTGATCGTTGCGAGGCT 61.095 57.895 0.00 0.00 39.91 4.58
786 812 1.626654 CGTTGATCGTTGCGAGGCTT 61.627 55.000 0.00 0.00 39.91 4.35
787 813 0.095417 GTTGATCGTTGCGAGGCTTC 59.905 55.000 0.00 0.00 39.91 3.86
788 814 1.019278 TTGATCGTTGCGAGGCTTCC 61.019 55.000 0.00 0.00 39.91 3.46
789 815 2.509336 ATCGTTGCGAGGCTTCCG 60.509 61.111 0.00 0.00 39.91 4.30
790 816 2.884087 GATCGTTGCGAGGCTTCCGA 62.884 60.000 0.00 0.00 39.91 4.55
791 817 2.501223 ATCGTTGCGAGGCTTCCGAA 62.501 55.000 0.00 0.00 39.91 4.30
792 818 2.730672 CGTTGCGAGGCTTCCGAAG 61.731 63.158 3.56 3.56 0.00 3.79
805 831 4.470876 CGAAGGAGCGCTCGTTAA 57.529 55.556 36.96 0.00 37.75 2.01
806 832 1.989163 CGAAGGAGCGCTCGTTAAC 59.011 57.895 36.96 26.47 37.75 2.01
807 833 0.456312 CGAAGGAGCGCTCGTTAACT 60.456 55.000 36.96 23.16 37.75 2.24
808 834 1.202110 CGAAGGAGCGCTCGTTAACTA 60.202 52.381 36.96 0.00 37.75 2.24
809 835 2.452105 GAAGGAGCGCTCGTTAACTAG 58.548 52.381 36.96 3.24 37.75 2.57
810 836 1.461559 AGGAGCGCTCGTTAACTAGT 58.538 50.000 29.81 3.95 0.00 2.57
811 837 1.817447 AGGAGCGCTCGTTAACTAGTT 59.183 47.619 29.81 13.68 0.00 2.24
812 838 3.012518 AGGAGCGCTCGTTAACTAGTTA 58.987 45.455 29.81 11.38 0.00 2.24
813 839 3.104470 GGAGCGCTCGTTAACTAGTTAC 58.896 50.000 29.81 8.45 0.00 2.50
814 840 3.181502 GGAGCGCTCGTTAACTAGTTACT 60.182 47.826 29.81 7.06 0.00 2.24
815 841 4.013582 AGCGCTCGTTAACTAGTTACTC 57.986 45.455 14.96 10.16 0.00 2.59
816 842 3.104470 GCGCTCGTTAACTAGTTACTCC 58.896 50.000 14.96 5.61 0.00 3.85
817 843 3.689346 CGCTCGTTAACTAGTTACTCCC 58.311 50.000 14.96 3.33 0.00 4.30
831 857 0.324943 ACTCCCCTGATTTGTGTCCG 59.675 55.000 0.00 0.00 0.00 4.79
834 860 1.144093 TCCCCTGATTTGTGTCCGTTT 59.856 47.619 0.00 0.00 0.00 3.60
858 888 4.287781 TGACGCGAGCGGACCAAA 62.288 61.111 21.69 0.00 44.69 3.28
859 889 3.774702 GACGCGAGCGGACCAAAC 61.775 66.667 21.69 0.90 44.69 2.93
916 946 1.401318 TTCTTCGGTCAACCACGGGA 61.401 55.000 0.00 0.00 35.14 5.14
933 963 3.027974 GGGACGATACAAGAGGCATAC 57.972 52.381 0.00 0.00 0.00 2.39
934 964 2.628657 GGGACGATACAAGAGGCATACT 59.371 50.000 0.00 0.00 0.00 2.12
935 965 3.825014 GGGACGATACAAGAGGCATACTA 59.175 47.826 0.00 0.00 0.00 1.82
936 966 4.082679 GGGACGATACAAGAGGCATACTAG 60.083 50.000 0.00 0.00 0.00 2.57
937 967 4.760715 GGACGATACAAGAGGCATACTAGA 59.239 45.833 0.00 0.00 0.00 2.43
938 968 5.416326 GGACGATACAAGAGGCATACTAGAT 59.584 44.000 0.00 0.00 0.00 1.98
939 969 6.598457 GGACGATACAAGAGGCATACTAGATA 59.402 42.308 0.00 0.00 0.00 1.98
940 970 7.201661 GGACGATACAAGAGGCATACTAGATAG 60.202 44.444 0.00 0.00 0.00 2.08
941 971 7.169591 ACGATACAAGAGGCATACTAGATAGT 58.830 38.462 0.00 0.00 40.24 2.12
942 972 8.319881 ACGATACAAGAGGCATACTAGATAGTA 58.680 37.037 0.00 2.34 42.43 1.82
943 973 8.605746 CGATACAAGAGGCATACTAGATAGTAC 58.394 40.741 0.00 0.00 41.18 2.73
955 985 6.117975 ACTAGATAGTACTACTGGAGAGCC 57.882 45.833 4.31 0.00 34.13 4.70
1221 1251 1.326598 CGATCGAAGATCTGCGCGAG 61.327 60.000 18.90 7.61 45.12 5.03
1356 1386 1.547372 CTGCAGTTTGCCCATAAGCTT 59.453 47.619 5.25 3.48 44.23 3.74
1629 1662 0.869068 CCGCCGATGTGTACAAAACA 59.131 50.000 0.00 0.00 35.06 2.83
1747 1780 2.106338 TCTGATTGCCAGGAAAGTGTGA 59.894 45.455 0.00 0.00 43.12 3.58
1770 1803 0.984230 TGGACACCTCCAATGTCTCC 59.016 55.000 5.22 0.00 44.26 3.71
1774 1807 1.279496 CACCTCCAATGTCTCCCAGA 58.721 55.000 0.00 0.00 0.00 3.86
1806 1839 3.152341 AGTCAGAAATCAGTTGGCCAAG 58.848 45.455 21.21 8.63 0.00 3.61
1812 1845 2.503895 ATCAGTTGGCCAAGAAGAGG 57.496 50.000 21.21 5.04 0.00 3.69
1813 1846 1.140312 TCAGTTGGCCAAGAAGAGGT 58.860 50.000 21.21 0.00 0.00 3.85
1814 1847 2.334977 TCAGTTGGCCAAGAAGAGGTA 58.665 47.619 21.21 0.00 0.00 3.08
1815 1848 2.038557 TCAGTTGGCCAAGAAGAGGTAC 59.961 50.000 21.21 4.04 0.00 3.34
1868 1936 6.481976 TCGGATTCATTTCGCACTAATGTATT 59.518 34.615 0.00 0.00 35.13 1.89
1876 1944 7.979115 TTTCGCACTAATGTATTAATTTGGC 57.021 32.000 0.00 0.00 0.00 4.52
1927 1995 5.869350 AGTCAAAACTCAAAAGAGTCAACG 58.131 37.500 0.00 0.00 33.73 4.10
2005 2073 7.840342 AATAAGCAGACTATGTGTTCTTCTG 57.160 36.000 0.00 0.00 37.37 3.02
2051 2119 9.265901 TCACTCTCTAATGTTTCTCTTTTTCTG 57.734 33.333 0.00 0.00 0.00 3.02
2115 2198 8.982723 TGAACCTGATAATTTCTCTAGCTAGTT 58.017 33.333 20.10 9.41 0.00 2.24
2208 2294 9.813446 AGAAAGGATGCAGATTAAATCATTTTC 57.187 29.630 0.00 0.00 35.23 2.29
2213 2299 9.245962 GGATGCAGATTAAATCATTTTCTCTTG 57.754 33.333 0.00 0.00 0.00 3.02
2312 2399 1.567357 TCCCAGATGACAACGATGGA 58.433 50.000 0.00 0.00 32.55 3.41
2432 2519 1.203758 TGCTCGAAGCGGTTATTCTCA 59.796 47.619 0.00 0.00 46.26 3.27
2603 2690 3.304257 TGCATGCAACAACATTCGTTAC 58.696 40.909 20.30 0.00 32.75 2.50
3041 3128 9.459640 CATAAAAATGCTAAAGATGATGACAGG 57.540 33.333 0.00 0.00 0.00 4.00
3117 3204 6.071463 GCATGTAAAACTGTACTCAACTTCG 58.929 40.000 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.382515 CTCTGCTACTACAGGCCGAC 59.617 60.000 0.00 0.00 38.26 4.79
16 17 0.255033 TCTCTGCTACTACAGGCCGA 59.745 55.000 0.00 0.00 38.26 5.54
17 18 1.000827 CATCTCTGCTACTACAGGCCG 60.001 57.143 0.00 0.00 38.26 6.13
18 19 2.295909 CTCATCTCTGCTACTACAGGCC 59.704 54.545 0.00 0.00 38.26 5.19
31 32 1.221293 GCCTGCTGCACTCATCTCT 59.779 57.895 0.00 0.00 40.77 3.10
32 33 2.172372 CGCCTGCTGCACTCATCTC 61.172 63.158 0.00 0.00 41.33 2.75
75 76 1.296056 CGACACCCATCGAACCCAAC 61.296 60.000 0.00 0.00 45.13 3.77
80 81 3.186047 CGGCGACACCCATCGAAC 61.186 66.667 0.00 0.00 45.13 3.95
100 101 1.134877 GGTACTAGAGAAACCACGGCC 60.135 57.143 0.00 0.00 33.28 6.13
123 124 2.378038 TGTGAGCTTTCTTTGTTGCCT 58.622 42.857 0.00 0.00 0.00 4.75
127 128 4.494484 GGTGTTTGTGAGCTTTCTTTGTT 58.506 39.130 0.00 0.00 0.00 2.83
128 129 3.427503 CGGTGTTTGTGAGCTTTCTTTGT 60.428 43.478 0.00 0.00 0.00 2.83
130 131 2.099098 CCGGTGTTTGTGAGCTTTCTTT 59.901 45.455 0.00 0.00 0.00 2.52
134 135 1.034838 TGCCGGTGTTTGTGAGCTTT 61.035 50.000 1.90 0.00 0.00 3.51
149 150 1.135286 GCTTTTGGAGGATTCTTGCCG 60.135 52.381 0.00 0.00 0.00 5.69
178 180 2.886730 ATCGACACAAATCCCCCGCC 62.887 60.000 0.00 0.00 0.00 6.13
179 181 1.451387 ATCGACACAAATCCCCCGC 60.451 57.895 0.00 0.00 0.00 6.13
180 182 1.714899 GCATCGACACAAATCCCCCG 61.715 60.000 0.00 0.00 0.00 5.73
184 186 1.062525 GCCGCATCGACACAAATCC 59.937 57.895 0.00 0.00 0.00 3.01
185 187 1.296867 CGCCGCATCGACACAAATC 60.297 57.895 0.00 0.00 0.00 2.17
209 211 4.278513 CCAGGCCGACCACCCAAA 62.279 66.667 0.00 0.00 39.06 3.28
230 232 1.153429 GTATTCGGCCGCTCCTTGT 60.153 57.895 23.51 3.09 0.00 3.16
232 234 0.252197 AAAGTATTCGGCCGCTCCTT 59.748 50.000 23.51 16.14 0.00 3.36
234 236 2.014594 CAAAGTATTCGGCCGCTCC 58.985 57.895 23.51 8.12 0.00 4.70
236 238 2.112815 GGCAAAGTATTCGGCCGCT 61.113 57.895 23.51 13.16 38.43 5.52
237 239 2.407616 GGCAAAGTATTCGGCCGC 59.592 61.111 23.51 6.27 38.43 6.53
239 241 1.436983 CCTCGGCAAAGTATTCGGCC 61.437 60.000 0.00 0.00 42.86 6.13
240 242 1.436983 CCCTCGGCAAAGTATTCGGC 61.437 60.000 0.00 0.00 0.00 5.54
241 243 0.814010 CCCCTCGGCAAAGTATTCGG 60.814 60.000 0.00 0.00 0.00 4.30
256 274 4.748798 CACCTCTCCCCTGCCCCT 62.749 72.222 0.00 0.00 0.00 4.79
261 279 4.106925 GCCTGCACCTCTCCCCTG 62.107 72.222 0.00 0.00 0.00 4.45
268 286 3.635268 CTTCCCTGGCCTGCACCTC 62.635 68.421 3.32 0.00 0.00 3.85
276 294 1.590339 AAATACCCCCTTCCCTGGCC 61.590 60.000 0.00 0.00 0.00 5.36
280 298 1.644337 GTGGAAAATACCCCCTTCCCT 59.356 52.381 0.00 0.00 38.28 4.20
281 299 1.342674 GGTGGAAAATACCCCCTTCCC 60.343 57.143 0.00 0.00 38.28 3.97
311 333 1.211457 CTCTCTTTGTCCTCCCATGGG 59.789 57.143 26.30 26.30 0.00 4.00
315 337 3.432378 GAGTACTCTCTTTGTCCTCCCA 58.568 50.000 15.91 0.00 37.68 4.37
339 361 3.764049 GACAGGACGCGAACGCAC 61.764 66.667 15.93 11.43 45.53 5.34
343 365 0.442699 GAAATGGACAGGACGCGAAC 59.557 55.000 15.93 4.59 0.00 3.95
344 366 1.011968 CGAAATGGACAGGACGCGAA 61.012 55.000 15.93 0.00 0.00 4.70
345 367 1.445410 CGAAATGGACAGGACGCGA 60.445 57.895 15.93 0.00 0.00 5.87
348 370 2.359792 CGTCGAAATGGACAGGACG 58.640 57.895 0.00 0.00 43.43 4.79
350 372 0.034198 TTGCGTCGAAATGGACAGGA 59.966 50.000 0.00 0.00 36.73 3.86
354 376 1.058057 GCGTTTGCGTCGAAATGGAC 61.058 55.000 0.00 0.00 40.81 4.02
372 394 3.926821 TTCGGTCTAAAATTGGGTTGC 57.073 42.857 0.00 0.00 0.00 4.17
373 395 7.033185 CCTATTTTCGGTCTAAAATTGGGTTG 58.967 38.462 12.01 0.00 42.77 3.77
374 396 6.722590 ACCTATTTTCGGTCTAAAATTGGGTT 59.277 34.615 19.41 4.63 46.78 4.11
378 400 9.983804 GTCTAACCTATTTTCGGTCTAAAATTG 57.016 33.333 0.00 0.00 39.27 2.32
411 433 1.459592 GTGTCCGGAAATGAGTGTTCG 59.540 52.381 5.23 0.00 0.00 3.95
418 440 4.394920 GCTTAAATGAGTGTCCGGAAATGA 59.605 41.667 5.23 0.00 0.00 2.57
424 450 2.422597 TGTGCTTAAATGAGTGTCCGG 58.577 47.619 0.00 0.00 0.00 5.14
428 454 3.003275 CACGGTTGTGCTTAAATGAGTGT 59.997 43.478 0.00 0.00 39.67 3.55
451 477 1.497722 GTTTTGCTTCCGCGAGAGG 59.502 57.895 8.23 4.88 39.65 3.69
452 478 1.497722 GGTTTTGCTTCCGCGAGAG 59.502 57.895 8.23 5.93 39.65 3.20
453 479 2.314647 CGGTTTTGCTTCCGCGAGA 61.315 57.895 8.23 0.00 40.28 4.04
454 480 2.173382 CGGTTTTGCTTCCGCGAG 59.827 61.111 8.23 0.00 40.28 5.03
459 485 1.531578 GAGAGTCACGGTTTTGCTTCC 59.468 52.381 0.00 0.00 0.00 3.46
460 486 2.032808 GTGAGAGTCACGGTTTTGCTTC 60.033 50.000 0.00 0.00 37.67 3.86
461 487 1.940613 GTGAGAGTCACGGTTTTGCTT 59.059 47.619 0.00 0.00 37.67 3.91
462 488 1.583054 GTGAGAGTCACGGTTTTGCT 58.417 50.000 0.00 0.00 37.67 3.91
514 540 2.355363 TCACGACCGTGCCTTTCG 60.355 61.111 16.76 0.00 45.04 3.46
515 541 1.282930 GAGTCACGACCGTGCCTTTC 61.283 60.000 16.76 8.20 45.04 2.62
516 542 1.300697 GAGTCACGACCGTGCCTTT 60.301 57.895 16.76 3.24 45.04 3.11
517 543 1.745320 AAGAGTCACGACCGTGCCTT 61.745 55.000 16.76 15.13 45.04 4.35
518 544 2.201022 AAGAGTCACGACCGTGCCT 61.201 57.895 16.76 11.62 45.04 4.75
519 545 2.022129 CAAGAGTCACGACCGTGCC 61.022 63.158 16.76 6.58 45.04 5.01
520 546 2.658707 GCAAGAGTCACGACCGTGC 61.659 63.158 16.76 12.00 45.04 5.34
521 547 2.365068 CGCAAGAGTCACGACCGTG 61.365 63.158 15.60 15.60 43.91 4.94
522 548 2.050351 CGCAAGAGTCACGACCGT 60.050 61.111 0.00 0.00 43.02 4.83
523 549 2.742710 TTCCGCAAGAGTCACGACCG 62.743 60.000 0.00 0.00 43.02 4.79
524 550 0.599204 TTTCCGCAAGAGTCACGACC 60.599 55.000 0.00 0.00 43.02 4.79
525 551 1.214367 TTTTCCGCAAGAGTCACGAC 58.786 50.000 0.00 0.00 43.02 4.34
526 552 1.942677 TTTTTCCGCAAGAGTCACGA 58.057 45.000 0.00 0.00 43.02 4.35
615 641 5.122396 GCTTCCTTAGCTTTTCGATCAGAAA 59.878 40.000 0.00 8.13 46.77 2.52
616 642 4.631813 GCTTCCTTAGCTTTTCGATCAGAA 59.368 41.667 0.00 0.00 46.77 3.02
617 643 4.184629 GCTTCCTTAGCTTTTCGATCAGA 58.815 43.478 0.00 0.00 46.77 3.27
618 644 4.528531 GCTTCCTTAGCTTTTCGATCAG 57.471 45.455 0.00 0.00 46.77 2.90
630 656 0.330267 TTTTCCCCGGGCTTCCTTAG 59.670 55.000 17.73 0.00 0.00 2.18
631 657 0.038599 GTTTTCCCCGGGCTTCCTTA 59.961 55.000 17.73 0.00 0.00 2.69
632 658 1.228769 GTTTTCCCCGGGCTTCCTT 60.229 57.895 17.73 0.00 0.00 3.36
633 659 2.439245 GTTTTCCCCGGGCTTCCT 59.561 61.111 17.73 0.00 0.00 3.36
634 660 2.678934 GGTTTTCCCCGGGCTTCC 60.679 66.667 17.73 8.83 0.00 3.46
635 661 1.116536 TTTGGTTTTCCCCGGGCTTC 61.117 55.000 17.73 2.73 39.73 3.86
636 662 0.691413 TTTTGGTTTTCCCCGGGCTT 60.691 50.000 17.73 0.00 39.73 4.35
637 663 0.472925 ATTTTGGTTTTCCCCGGGCT 60.473 50.000 17.73 0.00 39.73 5.19
638 664 0.321210 CATTTTGGTTTTCCCCGGGC 60.321 55.000 17.73 0.00 39.73 6.13
639 665 1.343069 TCATTTTGGTTTTCCCCGGG 58.657 50.000 15.80 15.80 39.73 5.73
640 666 4.810191 TTATCATTTTGGTTTTCCCCGG 57.190 40.909 0.00 0.00 39.73 5.73
674 700 6.477669 TTTTCGGCTTTTTAAACGGTTTTT 57.522 29.167 11.87 0.00 0.00 1.94
675 701 6.479436 CATTTTCGGCTTTTTAAACGGTTTT 58.521 32.000 11.87 0.00 0.00 2.43
676 702 5.502706 GCATTTTCGGCTTTTTAAACGGTTT 60.503 36.000 11.33 11.33 0.00 3.27
677 703 4.025563 GCATTTTCGGCTTTTTAAACGGTT 60.026 37.500 0.00 0.00 0.00 4.44
678 704 3.491639 GCATTTTCGGCTTTTTAAACGGT 59.508 39.130 0.00 0.00 0.00 4.83
679 705 3.421184 CGCATTTTCGGCTTTTTAAACGG 60.421 43.478 0.00 0.00 0.00 4.44
680 706 3.180782 ACGCATTTTCGGCTTTTTAAACG 59.819 39.130 0.00 0.00 0.00 3.60
681 707 4.026393 ACACGCATTTTCGGCTTTTTAAAC 60.026 37.500 0.00 0.00 0.00 2.01
682 708 4.026475 CACACGCATTTTCGGCTTTTTAAA 60.026 37.500 0.00 0.00 0.00 1.52
683 709 3.487574 CACACGCATTTTCGGCTTTTTAA 59.512 39.130 0.00 0.00 0.00 1.52
684 710 3.046390 CACACGCATTTTCGGCTTTTTA 58.954 40.909 0.00 0.00 0.00 1.52
685 711 1.857837 CACACGCATTTTCGGCTTTTT 59.142 42.857 0.00 0.00 0.00 1.94
686 712 1.066303 TCACACGCATTTTCGGCTTTT 59.934 42.857 0.00 0.00 0.00 2.27
687 713 0.665835 TCACACGCATTTTCGGCTTT 59.334 45.000 0.00 0.00 0.00 3.51
688 714 0.665835 TTCACACGCATTTTCGGCTT 59.334 45.000 0.00 0.00 0.00 4.35
689 715 0.665835 TTTCACACGCATTTTCGGCT 59.334 45.000 0.00 0.00 0.00 5.52
690 716 1.482278 TTTTCACACGCATTTTCGGC 58.518 45.000 0.00 0.00 0.00 5.54
691 717 3.367607 TCTTTTTCACACGCATTTTCGG 58.632 40.909 0.00 0.00 0.00 4.30
692 718 5.368552 TTTCTTTTTCACACGCATTTTCG 57.631 34.783 0.00 0.00 0.00 3.46
693 719 6.529696 TGTTTTCTTTTTCACACGCATTTTC 58.470 32.000 0.00 0.00 0.00 2.29
694 720 6.473397 TGTTTTCTTTTTCACACGCATTTT 57.527 29.167 0.00 0.00 0.00 1.82
695 721 6.473397 TTGTTTTCTTTTTCACACGCATTT 57.527 29.167 0.00 0.00 0.00 2.32
696 722 6.473397 TTTGTTTTCTTTTTCACACGCATT 57.527 29.167 0.00 0.00 0.00 3.56
697 723 6.473397 TTTTGTTTTCTTTTTCACACGCAT 57.527 29.167 0.00 0.00 0.00 4.73
698 724 5.907197 TTTTGTTTTCTTTTTCACACGCA 57.093 30.435 0.00 0.00 0.00 5.24
699 725 6.190154 CGAATTTTGTTTTCTTTTTCACACGC 59.810 34.615 0.00 0.00 0.00 5.34
700 726 7.441072 TCGAATTTTGTTTTCTTTTTCACACG 58.559 30.769 0.00 0.00 0.00 4.49
701 727 9.249844 CTTCGAATTTTGTTTTCTTTTTCACAC 57.750 29.630 0.00 0.00 0.00 3.82
702 728 8.439286 CCTTCGAATTTTGTTTTCTTTTTCACA 58.561 29.630 0.00 0.00 0.00 3.58
703 729 7.902917 CCCTTCGAATTTTGTTTTCTTTTTCAC 59.097 33.333 0.00 0.00 0.00 3.18
704 730 7.819900 TCCCTTCGAATTTTGTTTTCTTTTTCA 59.180 29.630 0.00 0.00 0.00 2.69
705 731 8.192068 TCCCTTCGAATTTTGTTTTCTTTTTC 57.808 30.769 0.00 0.00 0.00 2.29
706 732 7.201609 GCTCCCTTCGAATTTTGTTTTCTTTTT 60.202 33.333 0.00 0.00 0.00 1.94
707 733 6.257849 GCTCCCTTCGAATTTTGTTTTCTTTT 59.742 34.615 0.00 0.00 0.00 2.27
708 734 5.753438 GCTCCCTTCGAATTTTGTTTTCTTT 59.247 36.000 0.00 0.00 0.00 2.52
709 735 5.289595 GCTCCCTTCGAATTTTGTTTTCTT 58.710 37.500 0.00 0.00 0.00 2.52
710 736 4.556699 CGCTCCCTTCGAATTTTGTTTTCT 60.557 41.667 0.00 0.00 0.00 2.52
711 737 3.668656 CGCTCCCTTCGAATTTTGTTTTC 59.331 43.478 0.00 0.00 0.00 2.29
712 738 3.067601 ACGCTCCCTTCGAATTTTGTTTT 59.932 39.130 0.00 0.00 0.00 2.43
713 739 2.621526 ACGCTCCCTTCGAATTTTGTTT 59.378 40.909 0.00 0.00 0.00 2.83
714 740 2.225727 GACGCTCCCTTCGAATTTTGTT 59.774 45.455 0.00 0.00 0.00 2.83
715 741 1.804748 GACGCTCCCTTCGAATTTTGT 59.195 47.619 0.00 0.00 0.00 2.83
716 742 1.130561 GGACGCTCCCTTCGAATTTTG 59.869 52.381 0.00 0.00 0.00 2.44
717 743 1.271163 TGGACGCTCCCTTCGAATTTT 60.271 47.619 0.00 0.00 35.03 1.82
718 744 0.323629 TGGACGCTCCCTTCGAATTT 59.676 50.000 0.00 0.00 35.03 1.82
719 745 0.108138 CTGGACGCTCCCTTCGAATT 60.108 55.000 0.00 0.00 35.03 2.17
720 746 0.970937 TCTGGACGCTCCCTTCGAAT 60.971 55.000 0.00 0.00 35.03 3.34
721 747 1.595993 CTCTGGACGCTCCCTTCGAA 61.596 60.000 0.00 0.00 35.03 3.71
722 748 2.035155 TCTGGACGCTCCCTTCGA 59.965 61.111 2.23 0.00 35.03 3.71
723 749 2.492090 CTCTGGACGCTCCCTTCG 59.508 66.667 2.23 0.00 35.03 3.79
724 750 2.185608 GCTCTGGACGCTCCCTTC 59.814 66.667 2.23 0.00 35.03 3.46
725 751 3.764466 CGCTCTGGACGCTCCCTT 61.764 66.667 2.23 0.00 35.03 3.95
732 758 3.250323 CATGTCGCGCTCTGGACG 61.250 66.667 5.56 0.00 35.95 4.79
733 759 2.125912 ACATGTCGCGCTCTGGAC 60.126 61.111 5.56 5.97 0.00 4.02
734 760 2.125952 CACATGTCGCGCTCTGGA 60.126 61.111 5.56 0.00 0.00 3.86
735 761 2.125952 TCACATGTCGCGCTCTGG 60.126 61.111 5.56 0.00 0.00 3.86
736 762 2.782045 CGTCACATGTCGCGCTCTG 61.782 63.158 5.56 0.00 0.00 3.35
737 763 2.472232 TTCGTCACATGTCGCGCTCT 62.472 55.000 5.56 0.00 0.00 4.09
738 764 1.413767 ATTCGTCACATGTCGCGCTC 61.414 55.000 5.56 0.00 0.00 5.03
739 765 1.446099 ATTCGTCACATGTCGCGCT 60.446 52.632 5.56 2.08 0.00 5.92
740 766 1.296145 CATTCGTCACATGTCGCGC 60.296 57.895 0.00 0.00 0.00 6.86
741 767 0.023732 GACATTCGTCACATGTCGCG 59.976 55.000 0.00 0.00 40.83 5.87
742 768 3.858040 GACATTCGTCACATGTCGC 57.142 52.632 0.00 0.00 40.83 5.19
745 771 3.842820 CTCTCAGACATTCGTCACATGT 58.157 45.455 0.00 0.00 45.23 3.21
746 772 2.602211 GCTCTCAGACATTCGTCACATG 59.398 50.000 0.00 0.00 45.23 3.21
747 773 2.733542 CGCTCTCAGACATTCGTCACAT 60.734 50.000 0.00 0.00 45.23 3.21
748 774 1.401539 CGCTCTCAGACATTCGTCACA 60.402 52.381 0.00 0.00 45.23 3.58
749 775 1.263776 CGCTCTCAGACATTCGTCAC 58.736 55.000 0.00 0.00 45.23 3.67
750 776 0.881796 ACGCTCTCAGACATTCGTCA 59.118 50.000 0.00 0.00 45.23 4.35
751 777 1.651138 CAACGCTCTCAGACATTCGTC 59.349 52.381 0.00 0.00 42.95 4.20
752 778 1.269723 TCAACGCTCTCAGACATTCGT 59.730 47.619 0.00 0.00 0.00 3.85
753 779 1.982612 TCAACGCTCTCAGACATTCG 58.017 50.000 0.00 0.00 0.00 3.34
754 780 2.533535 CGATCAACGCTCTCAGACATTC 59.466 50.000 0.00 0.00 34.51 2.67
755 781 2.094494 ACGATCAACGCTCTCAGACATT 60.094 45.455 0.00 0.00 46.94 2.71
756 782 1.474478 ACGATCAACGCTCTCAGACAT 59.526 47.619 0.00 0.00 46.94 3.06
757 783 0.881796 ACGATCAACGCTCTCAGACA 59.118 50.000 0.00 0.00 46.94 3.41
758 784 1.651138 CAACGATCAACGCTCTCAGAC 59.349 52.381 0.00 0.00 46.94 3.51
759 785 1.982612 CAACGATCAACGCTCTCAGA 58.017 50.000 0.00 0.00 46.94 3.27
760 786 0.368227 GCAACGATCAACGCTCTCAG 59.632 55.000 0.00 0.00 46.94 3.35
761 787 1.344226 CGCAACGATCAACGCTCTCA 61.344 55.000 0.00 0.00 46.94 3.27
762 788 1.071019 TCGCAACGATCAACGCTCTC 61.071 55.000 0.00 0.00 46.94 3.20
763 789 1.073216 CTCGCAACGATCAACGCTCT 61.073 55.000 0.00 0.00 46.94 4.09
764 790 1.341802 CTCGCAACGATCAACGCTC 59.658 57.895 0.00 0.00 46.94 5.03
765 791 2.094659 CCTCGCAACGATCAACGCT 61.095 57.895 0.00 0.00 46.94 5.07
766 792 2.395690 CCTCGCAACGATCAACGC 59.604 61.111 0.00 0.00 46.94 4.84
768 794 0.095417 GAAGCCTCGCAACGATCAAC 59.905 55.000 0.00 0.00 34.61 3.18
769 795 1.019278 GGAAGCCTCGCAACGATCAA 61.019 55.000 0.00 0.00 34.61 2.57
770 796 1.447838 GGAAGCCTCGCAACGATCA 60.448 57.895 0.00 0.00 34.61 2.92
771 797 2.517450 CGGAAGCCTCGCAACGATC 61.517 63.158 0.00 0.00 34.61 3.69
772 798 2.501223 TTCGGAAGCCTCGCAACGAT 62.501 55.000 0.00 0.00 34.61 3.73
773 799 3.215597 TTCGGAAGCCTCGCAACGA 62.216 57.895 0.00 0.00 0.00 3.85
774 800 2.730672 CTTCGGAAGCCTCGCAACG 61.731 63.158 4.57 0.00 0.00 4.10
775 801 2.391389 CCTTCGGAAGCCTCGCAAC 61.391 63.158 12.29 0.00 0.00 4.17
776 802 2.047274 CCTTCGGAAGCCTCGCAA 60.047 61.111 12.29 0.00 0.00 4.85
777 803 2.994995 TCCTTCGGAAGCCTCGCA 60.995 61.111 12.29 0.00 0.00 5.10
778 804 2.202810 CTCCTTCGGAAGCCTCGC 60.203 66.667 12.29 0.00 0.00 5.03
779 805 2.202810 GCTCCTTCGGAAGCCTCG 60.203 66.667 12.29 0.00 0.00 4.63
780 806 2.202810 CGCTCCTTCGGAAGCCTC 60.203 66.667 12.29 2.39 0.00 4.70
781 807 4.459089 GCGCTCCTTCGGAAGCCT 62.459 66.667 12.29 0.00 32.03 4.58
782 808 4.459089 AGCGCTCCTTCGGAAGCC 62.459 66.667 2.64 2.30 36.52 4.35
783 809 2.888051 GAGCGCTCCTTCGGAAGC 60.888 66.667 27.22 1.06 36.25 3.86
784 810 2.580867 CGAGCGCTCCTTCGGAAG 60.581 66.667 30.66 10.96 0.00 3.46
785 811 1.588824 TAACGAGCGCTCCTTCGGAA 61.589 55.000 30.66 10.15 0.00 4.30
786 812 1.588824 TTAACGAGCGCTCCTTCGGA 61.589 55.000 30.66 12.50 0.00 4.55
787 813 1.153901 TTAACGAGCGCTCCTTCGG 60.154 57.895 30.66 18.71 0.00 4.30
788 814 0.456312 AGTTAACGAGCGCTCCTTCG 60.456 55.000 30.66 22.24 0.00 3.79
789 815 2.159407 ACTAGTTAACGAGCGCTCCTTC 60.159 50.000 30.66 14.44 0.00 3.46
790 816 1.817447 ACTAGTTAACGAGCGCTCCTT 59.183 47.619 30.66 26.03 0.00 3.36
791 817 1.461559 ACTAGTTAACGAGCGCTCCT 58.538 50.000 30.66 22.52 0.00 3.69
792 818 2.274920 AACTAGTTAACGAGCGCTCC 57.725 50.000 30.66 16.60 0.00 4.70
793 819 4.013582 AGTAACTAGTTAACGAGCGCTC 57.986 45.455 27.64 27.64 0.00 5.03
794 820 3.181502 GGAGTAACTAGTTAACGAGCGCT 60.182 47.826 11.27 11.27 0.00 5.92
795 821 3.104470 GGAGTAACTAGTTAACGAGCGC 58.896 50.000 16.82 0.00 0.00 5.92
796 822 3.488216 GGGGAGTAACTAGTTAACGAGCG 60.488 52.174 16.82 1.04 0.00 5.03
797 823 3.698539 AGGGGAGTAACTAGTTAACGAGC 59.301 47.826 16.82 4.65 0.00 5.03
798 824 4.946157 TCAGGGGAGTAACTAGTTAACGAG 59.054 45.833 16.82 13.50 0.00 4.18
799 825 4.922206 TCAGGGGAGTAACTAGTTAACGA 58.078 43.478 16.82 3.92 0.00 3.85
800 826 5.848833 ATCAGGGGAGTAACTAGTTAACG 57.151 43.478 16.82 1.82 0.00 3.18
801 827 7.333672 CACAAATCAGGGGAGTAACTAGTTAAC 59.666 40.741 16.82 13.21 0.00 2.01
802 828 7.016858 ACACAAATCAGGGGAGTAACTAGTTAA 59.983 37.037 16.82 0.00 0.00 2.01
803 829 6.499350 ACACAAATCAGGGGAGTAACTAGTTA 59.501 38.462 11.38 11.38 0.00 2.24
804 830 5.309806 ACACAAATCAGGGGAGTAACTAGTT 59.690 40.000 13.68 13.68 0.00 2.24
805 831 4.844655 ACACAAATCAGGGGAGTAACTAGT 59.155 41.667 0.00 0.00 0.00 2.57
806 832 5.420409 GACACAAATCAGGGGAGTAACTAG 58.580 45.833 0.00 0.00 0.00 2.57
807 833 4.224370 GGACACAAATCAGGGGAGTAACTA 59.776 45.833 0.00 0.00 0.00 2.24
808 834 3.009143 GGACACAAATCAGGGGAGTAACT 59.991 47.826 0.00 0.00 0.00 2.24
809 835 3.344515 GGACACAAATCAGGGGAGTAAC 58.655 50.000 0.00 0.00 0.00 2.50
810 836 2.027561 CGGACACAAATCAGGGGAGTAA 60.028 50.000 0.00 0.00 0.00 2.24
811 837 1.553248 CGGACACAAATCAGGGGAGTA 59.447 52.381 0.00 0.00 0.00 2.59
812 838 0.324943 CGGACACAAATCAGGGGAGT 59.675 55.000 0.00 0.00 0.00 3.85
813 839 0.324943 ACGGACACAAATCAGGGGAG 59.675 55.000 0.00 0.00 0.00 4.30
814 840 0.768622 AACGGACACAAATCAGGGGA 59.231 50.000 0.00 0.00 0.00 4.81
815 841 1.539827 GAAACGGACACAAATCAGGGG 59.460 52.381 0.00 0.00 0.00 4.79
816 842 2.484264 GAGAAACGGACACAAATCAGGG 59.516 50.000 0.00 0.00 0.00 4.45
817 843 3.403038 AGAGAAACGGACACAAATCAGG 58.597 45.455 0.00 0.00 0.00 3.86
831 857 1.073768 GCTCGCGTCAGGAGAGAAAC 61.074 60.000 5.77 0.00 44.46 2.78
834 860 3.500642 CGCTCGCGTCAGGAGAGA 61.501 66.667 5.77 0.00 44.46 3.10
876 906 4.965200 AGAGGATATCTGTTAGGCCAAC 57.035 45.455 5.01 8.36 36.69 3.77
916 946 7.169591 ACTATCTAGTATGCCTCTTGTATCGT 58.830 38.462 0.00 0.00 34.13 3.73
930 960 7.364056 CGGCTCTCCAGTAGTACTATCTAGTAT 60.364 44.444 5.75 0.00 40.55 2.12
931 961 6.071447 CGGCTCTCCAGTAGTACTATCTAGTA 60.071 46.154 5.75 0.00 37.73 1.82
932 962 5.279607 CGGCTCTCCAGTAGTACTATCTAGT 60.280 48.000 5.75 0.00 40.24 2.57
933 963 5.172934 CGGCTCTCCAGTAGTACTATCTAG 58.827 50.000 5.75 2.52 0.00 2.43
934 964 4.563168 GCGGCTCTCCAGTAGTACTATCTA 60.563 50.000 5.75 0.00 0.00 1.98
935 965 3.807913 GCGGCTCTCCAGTAGTACTATCT 60.808 52.174 5.75 2.76 0.00 1.98
936 966 2.485038 GCGGCTCTCCAGTAGTACTATC 59.515 54.545 5.75 0.38 0.00 2.08
937 967 2.506444 GCGGCTCTCCAGTAGTACTAT 58.494 52.381 5.75 0.00 0.00 2.12
938 968 1.809271 CGCGGCTCTCCAGTAGTACTA 60.809 57.143 1.57 0.00 0.00 1.82
939 969 1.096386 CGCGGCTCTCCAGTAGTACT 61.096 60.000 0.00 0.00 0.00 2.73
940 970 1.355916 CGCGGCTCTCCAGTAGTAC 59.644 63.158 0.00 0.00 0.00 2.73
941 971 1.822613 CCGCGGCTCTCCAGTAGTA 60.823 63.158 14.67 0.00 0.00 1.82
942 972 2.912987 ATCCGCGGCTCTCCAGTAGT 62.913 60.000 23.51 0.00 0.00 2.73
943 973 2.136196 GATCCGCGGCTCTCCAGTAG 62.136 65.000 23.51 0.00 0.00 2.57
955 985 2.798675 CTGCTCGATCGATCCGCG 60.799 66.667 19.78 7.64 42.69 6.46
983 1013 2.838202 TCCATCTCCGTTTCCTAGCTTT 59.162 45.455 0.00 0.00 0.00 3.51
984 1014 2.432510 CTCCATCTCCGTTTCCTAGCTT 59.567 50.000 0.00 0.00 0.00 3.74
1164 1194 1.697284 CTCCATGATCCTGTCTCGGA 58.303 55.000 0.00 0.00 37.50 4.55
1221 1251 1.365633 CTCTATCCCGTGAGCCAGC 59.634 63.158 0.00 0.00 0.00 4.85
1356 1386 2.169978 CACCATCTGCTTCATCCTCTGA 59.830 50.000 0.00 0.00 0.00 3.27
1770 1803 1.995484 CTGACTTGTACGCACATCTGG 59.005 52.381 0.00 0.00 33.76 3.86
1774 1807 4.314961 TGATTTCTGACTTGTACGCACAT 58.685 39.130 0.00 0.00 33.76 3.21
1806 1839 9.181061 AGAGAGTTCTAAATACAGTACCTCTTC 57.819 37.037 0.00 0.00 28.56 2.87
1812 1845 8.989653 AAAGCAGAGAGTTCTAAATACAGTAC 57.010 34.615 0.00 0.00 30.73 2.73
1814 1847 8.808092 AGTAAAGCAGAGAGTTCTAAATACAGT 58.192 33.333 0.00 0.00 30.73 3.55
1815 1848 9.646427 AAGTAAAGCAGAGAGTTCTAAATACAG 57.354 33.333 0.00 0.00 30.73 2.74
1816 1849 9.640963 GAAGTAAAGCAGAGAGTTCTAAATACA 57.359 33.333 0.00 0.00 30.73 2.29
1876 1944 6.269315 CACTCTTAGTACTAGCAAGGTGATG 58.731 44.000 14.24 3.39 0.00 3.07
2026 2094 8.014517 GCAGAAAAAGAGAAACATTAGAGAGTG 58.985 37.037 0.00 0.00 0.00 3.51
2051 2119 9.267096 CGTTTTTAAGAGATGAAAACTCATAGC 57.733 33.333 8.65 0.00 42.35 2.97
2115 2198 1.876497 GCAGGGCCGCAATTTCTCAA 61.876 55.000 14.09 0.00 0.00 3.02
2257 2344 3.414549 TTTTTCCACTGAACTTGCGTC 57.585 42.857 0.00 0.00 0.00 5.19
2278 2365 5.718130 TCATCTGGGAAAGCTGATTTGATTT 59.282 36.000 0.00 0.00 0.00 2.17
2312 2399 0.181114 TCACCACAACTCTGCTGCTT 59.819 50.000 0.00 0.00 0.00 3.91
2432 2519 0.687354 TCTTCGGGCAAGCTTTCTCT 59.313 50.000 0.00 0.00 31.26 3.10
2569 2656 3.286329 TGCATGCATCTTCACAGGTAT 57.714 42.857 18.46 0.00 0.00 2.73
2603 2690 2.297597 GGTCTCTCCGTTCTCCATATGG 59.702 54.545 16.25 16.25 0.00 2.74
2999 3086 2.533266 TATGATGGAGAGAAAGCCGC 57.467 50.000 0.00 0.00 0.00 6.53
3117 3204 0.097674 CGCAGCAGTTCATACTTGCC 59.902 55.000 0.00 0.00 35.59 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.