Multiple sequence alignment - TraesCS4A01G347800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G347800 chr4A 100.000 5194 0 0 1 5194 625530333 625535526 0.000000e+00 9592.0
1 TraesCS4A01G347800 chr4A 94.017 117 5 2 4278 4393 368568617 368568502 5.350000e-40 176.0
2 TraesCS4A01G347800 chr5D 90.476 1239 59 19 2696 3902 543598209 543596998 0.000000e+00 1580.0
3 TraesCS4A01G347800 chr5D 93.898 803 22 6 1866 2651 543598995 543598203 0.000000e+00 1186.0
4 TraesCS4A01G347800 chr5D 92.194 474 20 10 1 464 543601582 543601116 0.000000e+00 654.0
5 TraesCS4A01G347800 chr5D 96.396 333 12 0 3898 4230 543596910 543596578 2.730000e-152 549.0
6 TraesCS4A01G347800 chr5D 83.411 645 37 30 1226 1836 543599672 543599064 7.660000e-148 534.0
7 TraesCS4A01G347800 chr5D 88.288 333 20 13 4390 4711 543596355 543596031 1.060000e-101 381.0
8 TraesCS4A01G347800 chr5D 90.417 240 19 2 4702 4941 543595667 543595432 3.900000e-81 313.0
9 TraesCS4A01G347800 chr5D 82.625 259 26 9 4944 5194 543593399 543593152 1.470000e-50 211.0
10 TraesCS4A01G347800 chr5D 82.427 239 19 6 494 710 543601023 543600786 2.470000e-43 187.0
11 TraesCS4A01G347800 chr5B 85.005 1067 101 27 1557 2596 685434309 685435343 0.000000e+00 1029.0
12 TraesCS4A01G347800 chr5B 91.231 536 29 9 3373 3902 685435900 685436423 0.000000e+00 713.0
13 TraesCS4A01G347800 chr5B 93.287 432 19 4 1 427 685431458 685431884 3.410000e-176 628.0
14 TraesCS4A01G347800 chr5B 93.438 320 8 7 3898 4204 685436515 685436834 3.660000e-126 462.0
15 TraesCS4A01G347800 chr5B 85.177 452 36 15 788 1224 685432319 685432754 7.990000e-118 435.0
16 TraesCS4A01G347800 chr5B 87.805 369 35 8 4775 5142 685436837 685437196 1.730000e-114 424.0
17 TraesCS4A01G347800 chr5B 87.748 302 31 4 2701 2997 685435449 685435749 1.070000e-91 348.0
18 TraesCS4A01G347800 chr5B 84.814 349 26 13 1226 1548 685433791 685434138 5.020000e-85 326.0
19 TraesCS4A01G347800 chr5B 88.525 122 13 1 494 615 685432204 685432324 4.190000e-31 147.0
20 TraesCS4A01G347800 chr5A 89.677 155 16 0 3711 3865 681466051 681466205 1.140000e-46 198.0
21 TraesCS4A01G347800 chr5A 93.277 119 7 1 4278 4396 706934083 706933966 1.920000e-39 174.0
22 TraesCS4A01G347800 chr5A 92.500 120 9 0 4279 4398 55248083 55247964 6.910000e-39 172.0
23 TraesCS4A01G347800 chr5A 93.162 117 7 1 4276 4392 590099940 590099825 2.490000e-38 171.0
24 TraesCS4A01G347800 chr5A 93.103 116 7 1 4278 4393 503040130 503040016 8.940000e-38 169.0
25 TraesCS4A01G347800 chr5A 74.621 264 54 7 3891 4148 681466312 681466568 2.560000e-18 104.0
26 TraesCS4A01G347800 chr4D 89.677 155 16 0 3711 3865 500500980 500501134 1.140000e-46 198.0
27 TraesCS4A01G347800 chr4D 74.615 260 48 12 3898 4148 500501242 500501492 1.190000e-16 99.0
28 TraesCS4A01G347800 chr4D 94.286 35 2 0 795 829 408587603 408587637 3.000000e-03 54.7
29 TraesCS4A01G347800 chr4B 88.387 155 18 0 3711 3865 644372692 644372538 2.470000e-43 187.0
30 TraesCS4A01G347800 chr4B 95.327 107 5 0 4286 4392 579456814 579456708 2.490000e-38 171.0
31 TraesCS4A01G347800 chr4B 75.294 255 43 13 3904 4148 644372421 644372177 2.560000e-18 104.0
32 TraesCS4A01G347800 chr7A 92.857 126 8 1 4274 4399 521957566 521957690 1.150000e-41 182.0
33 TraesCS4A01G347800 chr6A 91.803 122 8 2 4280 4400 99966793 99966913 8.940000e-38 169.0
34 TraesCS4A01G347800 chr6A 94.231 52 3 0 719 770 389242984 389242933 4.310000e-11 80.5
35 TraesCS4A01G347800 chr7D 91.736 121 9 1 4281 4401 19020330 19020449 3.220000e-37 167.0
36 TraesCS4A01G347800 chr1A 87.629 97 10 2 3760 3855 549358485 549358390 1.530000e-20 111.0
37 TraesCS4A01G347800 chr1B 86.408 103 6 6 3757 3855 626155028 626155126 7.110000e-19 106.0
38 TraesCS4A01G347800 chr1D 84.466 103 8 6 3757 3855 455773343 455773245 1.540000e-15 95.3
39 TraesCS4A01G347800 chr6B 93.878 49 3 0 891 939 228807977 228807929 2.010000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G347800 chr4A 625530333 625535526 5193 False 9592.000000 9592 100.000000 1 5194 1 chr4A.!!$F1 5193
1 TraesCS4A01G347800 chr5D 543593152 543601582 8430 True 621.666667 1580 88.903556 1 5194 9 chr5D.!!$R1 5193
2 TraesCS4A01G347800 chr5B 685431458 685437196 5738 False 501.333333 1029 88.558889 1 5142 9 chr5B.!!$F1 5141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
435 443 0.034863 TAGGTCGATTTGGGTTGGCC 60.035 55.0 0.00 0.00 0.00 5.36 F
692 1009 0.037882 CGATCTACATGGCTGGCGAT 60.038 55.0 0.00 0.00 0.00 4.58 F
796 1113 0.039618 ATTGGGGTCGTTTGCTGGAT 59.960 50.0 0.00 0.00 0.00 3.41 F
1295 2710 0.040692 CGCGCATCCATGGAGAAATG 60.041 55.0 21.33 14.36 0.00 2.32 F
2891 4592 0.249868 GGTTTGCTCCCAACCAAAGC 60.250 55.0 0.00 0.00 40.67 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1276 2684 0.040692 CATTTCTCCATGGATGCGCG 60.041 55.000 16.63 0.00 0.00 6.86 R
1923 3599 0.689745 AATCATGCCATGGCTGCCTT 60.690 50.000 35.53 20.86 42.51 4.35 R
1993 3669 0.729140 GCTTTCCGCCATCGTTGTTG 60.729 55.000 0.00 0.00 0.00 3.33 R
3028 4733 2.025898 TGCCACATGGTATGCAATGAG 58.974 47.619 5.03 0.00 37.57 2.90 R
4379 6403 0.032017 AGCCATCTACTCCCTCCGTT 60.032 55.000 0.00 0.00 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 116 1.452145 TTGGCGGAGTTTTGGAGTGC 61.452 55.000 0.00 0.00 0.00 4.40
117 120 0.040067 CGGAGTTTTGGAGTGCTTGC 60.040 55.000 0.00 0.00 0.00 4.01
159 162 3.312828 GTGTCTGATGATATCGCCACTC 58.687 50.000 0.00 0.00 0.00 3.51
233 236 3.125487 CACACATTACGCGGAAACCATTA 59.875 43.478 8.38 0.00 0.00 1.90
241 244 2.695359 GCGGAAACCATTACTGACTGA 58.305 47.619 0.00 0.00 0.00 3.41
356 364 0.742281 ATGCTCTGGCGCTGTTACTG 60.742 55.000 7.64 0.00 42.25 2.74
368 376 5.501715 GCGCTGTTACTGTACGTTATACTA 58.498 41.667 0.00 0.00 0.00 1.82
371 379 7.182761 CGCTGTTACTGTACGTTATACTAGTT 58.817 38.462 0.00 0.00 0.00 2.24
372 380 7.163195 CGCTGTTACTGTACGTTATACTAGTTG 59.837 40.741 0.00 0.00 0.00 3.16
373 381 7.044445 GCTGTTACTGTACGTTATACTAGTTGC 60.044 40.741 0.00 0.00 0.00 4.17
375 383 5.902613 ACTGTACGTTATACTAGTTGCCA 57.097 39.130 0.00 0.00 0.00 4.92
377 385 6.501781 ACTGTACGTTATACTAGTTGCCATC 58.498 40.000 0.00 0.00 0.00 3.51
378 386 6.320672 ACTGTACGTTATACTAGTTGCCATCT 59.679 38.462 0.00 0.00 0.00 2.90
431 439 4.360951 TTTGAGTAGGTCGATTTGGGTT 57.639 40.909 0.00 0.00 0.00 4.11
435 443 0.034863 TAGGTCGATTTGGGTTGGCC 60.035 55.000 0.00 0.00 0.00 5.36
468 705 2.296190 CGCCTGCCTTTTTAGAAAAGGT 59.704 45.455 25.01 0.00 46.52 3.50
474 711 4.712337 TGCCTTTTTAGAAAAGGTGGACAA 59.288 37.500 25.01 8.76 46.52 3.18
492 792 4.283212 GGACAATGTCTTCCAAATTTCCCA 59.717 41.667 13.53 0.00 32.47 4.37
547 851 2.479837 TGTCCGCGCATAATTTCCTAG 58.520 47.619 8.75 0.00 0.00 3.02
550 854 1.798813 CCGCGCATAATTTCCTAGGAC 59.201 52.381 12.22 0.00 0.00 3.85
568 872 2.328473 GACTTTTTGGCAGCGAATTCC 58.672 47.619 0.00 0.00 0.00 3.01
577 894 2.032178 GGCAGCGAATTCCTATGACAAC 59.968 50.000 0.00 0.00 0.00 3.32
590 907 5.467399 TCCTATGACAACGAAACGAAAACAT 59.533 36.000 0.00 0.00 0.00 2.71
595 912 2.961522 ACGAAACGAAAACATGCGAT 57.038 40.000 0.00 0.00 0.00 4.58
596 913 2.570169 ACGAAACGAAAACATGCGATG 58.430 42.857 0.00 0.00 0.00 3.84
632 949 7.148255 TGCTTTGTGCTTTAATATACAGTCTGG 60.148 37.037 4.53 0.00 43.37 3.86
639 956 7.552687 TGCTTTAATATACAGTCTGGTGAAAGG 59.447 37.037 4.53 0.00 0.00 3.11
668 985 2.510238 GCAGTACAGAGGCGCAGG 60.510 66.667 10.83 0.00 0.00 4.85
680 997 3.323136 CGCAGGCGCACGATCTAC 61.323 66.667 10.83 0.00 38.40 2.59
681 998 2.202743 GCAGGCGCACGATCTACA 60.203 61.111 10.83 0.00 38.36 2.74
682 999 1.592669 GCAGGCGCACGATCTACAT 60.593 57.895 10.83 0.00 38.36 2.29
683 1000 1.825285 GCAGGCGCACGATCTACATG 61.825 60.000 10.83 0.00 38.36 3.21
684 1001 1.068083 AGGCGCACGATCTACATGG 59.932 57.895 10.83 0.00 0.00 3.66
685 1002 2.598632 GGCGCACGATCTACATGGC 61.599 63.158 10.83 0.00 0.00 4.40
686 1003 1.592669 GCGCACGATCTACATGGCT 60.593 57.895 0.30 0.00 0.00 4.75
687 1004 1.825285 GCGCACGATCTACATGGCTG 61.825 60.000 0.30 0.00 0.00 4.85
688 1005 1.217585 CGCACGATCTACATGGCTGG 61.218 60.000 0.00 0.00 0.00 4.85
689 1006 1.502163 GCACGATCTACATGGCTGGC 61.502 60.000 0.00 0.00 0.00 4.85
690 1007 1.068083 ACGATCTACATGGCTGGCG 59.932 57.895 0.00 0.00 0.00 5.69
691 1008 1.363807 CGATCTACATGGCTGGCGA 59.636 57.895 0.00 0.00 0.00 5.54
692 1009 0.037882 CGATCTACATGGCTGGCGAT 60.038 55.000 0.00 0.00 0.00 4.58
693 1010 1.436600 GATCTACATGGCTGGCGATG 58.563 55.000 14.29 14.29 37.99 3.84
694 1011 0.761187 ATCTACATGGCTGGCGATGT 59.239 50.000 22.35 22.35 45.05 3.06
695 1012 0.179076 TCTACATGGCTGGCGATGTG 60.179 55.000 25.55 17.62 43.40 3.21
696 1013 1.153188 TACATGGCTGGCGATGTGG 60.153 57.895 25.55 3.42 43.40 4.17
697 1014 1.621672 TACATGGCTGGCGATGTGGA 61.622 55.000 25.55 10.19 43.40 4.02
698 1015 2.124570 ATGGCTGGCGATGTGGAC 60.125 61.111 0.00 0.00 0.00 4.02
699 1016 4.758251 TGGCTGGCGATGTGGACG 62.758 66.667 0.00 0.00 0.00 4.79
701 1018 4.760047 GCTGGCGATGTGGACGGT 62.760 66.667 0.00 0.00 0.00 4.83
702 1019 2.047274 CTGGCGATGTGGACGGTT 60.047 61.111 0.00 0.00 0.00 4.44
703 1020 2.047655 TGGCGATGTGGACGGTTC 60.048 61.111 0.00 0.00 0.00 3.62
704 1021 2.264794 GGCGATGTGGACGGTTCT 59.735 61.111 0.00 0.00 0.00 3.01
705 1022 1.375523 GGCGATGTGGACGGTTCTT 60.376 57.895 0.00 0.00 0.00 2.52
706 1023 0.953960 GGCGATGTGGACGGTTCTTT 60.954 55.000 0.00 0.00 0.00 2.52
707 1024 0.442699 GCGATGTGGACGGTTCTTTC 59.557 55.000 0.00 0.00 0.00 2.62
708 1025 1.790755 CGATGTGGACGGTTCTTTCA 58.209 50.000 0.00 0.00 0.00 2.69
709 1026 2.139917 CGATGTGGACGGTTCTTTCAA 58.860 47.619 0.00 0.00 0.00 2.69
710 1027 2.096417 CGATGTGGACGGTTCTTTCAAC 60.096 50.000 0.00 0.00 0.00 3.18
711 1028 1.670791 TGTGGACGGTTCTTTCAACC 58.329 50.000 0.00 0.00 36.96 3.77
712 1029 1.210967 TGTGGACGGTTCTTTCAACCT 59.789 47.619 2.17 0.00 38.15 3.50
713 1030 1.602377 GTGGACGGTTCTTTCAACCTG 59.398 52.381 2.17 0.00 38.15 4.00
714 1031 1.235724 GGACGGTTCTTTCAACCTGG 58.764 55.000 2.17 0.00 38.15 4.45
715 1032 0.591659 GACGGTTCTTTCAACCTGGC 59.408 55.000 0.00 0.00 38.15 4.85
716 1033 1.164041 ACGGTTCTTTCAACCTGGCG 61.164 55.000 0.00 0.00 38.15 5.69
717 1034 1.164041 CGGTTCTTTCAACCTGGCGT 61.164 55.000 0.00 0.00 38.15 5.68
718 1035 0.310854 GGTTCTTTCAACCTGGCGTG 59.689 55.000 0.00 0.00 37.34 5.34
719 1036 1.305201 GTTCTTTCAACCTGGCGTGA 58.695 50.000 0.00 0.00 0.00 4.35
720 1037 1.880027 GTTCTTTCAACCTGGCGTGAT 59.120 47.619 0.00 0.00 0.00 3.06
721 1038 2.270352 TCTTTCAACCTGGCGTGATT 57.730 45.000 0.00 0.00 0.00 2.57
722 1039 2.582052 TCTTTCAACCTGGCGTGATTT 58.418 42.857 0.00 0.00 0.00 2.17
723 1040 2.955660 TCTTTCAACCTGGCGTGATTTT 59.044 40.909 0.00 0.00 0.00 1.82
724 1041 3.004315 TCTTTCAACCTGGCGTGATTTTC 59.996 43.478 0.00 0.00 0.00 2.29
725 1042 0.871722 TCAACCTGGCGTGATTTTCG 59.128 50.000 0.00 0.00 0.00 3.46
726 1043 0.591170 CAACCTGGCGTGATTTTCGT 59.409 50.000 0.00 0.00 0.00 3.85
727 1044 0.591170 AACCTGGCGTGATTTTCGTG 59.409 50.000 0.00 0.00 0.00 4.35
728 1045 0.250124 ACCTGGCGTGATTTTCGTGA 60.250 50.000 0.00 0.00 0.00 4.35
729 1046 0.443869 CCTGGCGTGATTTTCGTGAG 59.556 55.000 0.00 0.00 0.00 3.51
730 1047 1.428448 CTGGCGTGATTTTCGTGAGA 58.572 50.000 0.00 0.00 39.20 3.27
731 1048 1.391485 CTGGCGTGATTTTCGTGAGAG 59.609 52.381 0.00 0.00 43.69 3.20
732 1049 1.000394 TGGCGTGATTTTCGTGAGAGA 60.000 47.619 0.00 0.00 43.69 3.10
733 1050 2.066262 GGCGTGATTTTCGTGAGAGAA 58.934 47.619 0.00 0.00 43.69 2.87
734 1051 2.159827 GGCGTGATTTTCGTGAGAGAAC 60.160 50.000 0.00 0.00 43.69 3.01
735 1052 2.159827 GCGTGATTTTCGTGAGAGAACC 60.160 50.000 0.00 0.00 43.69 3.62
736 1053 3.057019 CGTGATTTTCGTGAGAGAACCA 58.943 45.455 0.00 0.00 43.69 3.67
737 1054 3.493129 CGTGATTTTCGTGAGAGAACCAA 59.507 43.478 0.00 0.00 43.69 3.67
738 1055 4.025229 CGTGATTTTCGTGAGAGAACCAAA 60.025 41.667 0.00 0.00 43.69 3.28
739 1056 5.334105 CGTGATTTTCGTGAGAGAACCAAAT 60.334 40.000 0.00 0.00 43.69 2.32
740 1057 6.438763 GTGATTTTCGTGAGAGAACCAAATT 58.561 36.000 0.00 0.00 43.69 1.82
741 1058 6.578919 GTGATTTTCGTGAGAGAACCAAATTC 59.421 38.462 0.00 0.00 43.69 2.17
742 1059 6.262049 TGATTTTCGTGAGAGAACCAAATTCA 59.738 34.615 0.00 0.00 43.69 2.57
743 1060 6.443934 TTTTCGTGAGAGAACCAAATTCAA 57.556 33.333 0.00 0.00 43.69 2.69
744 1061 5.673337 TTCGTGAGAGAACCAAATTCAAG 57.327 39.130 0.00 0.00 43.69 3.02
745 1062 4.703897 TCGTGAGAGAACCAAATTCAAGT 58.296 39.130 0.00 0.00 40.09 3.16
746 1063 5.123227 TCGTGAGAGAACCAAATTCAAGTT 58.877 37.500 0.00 0.00 40.09 2.66
747 1064 5.007626 TCGTGAGAGAACCAAATTCAAGTTG 59.992 40.000 0.00 0.00 40.09 3.16
748 1065 7.893894 TCGTGAGAGAACCAAATTCAAGTTGG 61.894 42.308 15.15 15.15 42.67 3.77
757 1074 6.088016 CCAAATTCAAGTTGGTGAAGATGA 57.912 37.500 8.53 0.00 40.72 2.92
758 1075 6.694447 CCAAATTCAAGTTGGTGAAGATGAT 58.306 36.000 8.53 0.00 40.72 2.45
759 1076 6.588756 CCAAATTCAAGTTGGTGAAGATGATG 59.411 38.462 8.53 0.00 40.72 3.07
760 1077 7.372714 CAAATTCAAGTTGGTGAAGATGATGA 58.627 34.615 2.34 0.00 40.72 2.92
761 1078 7.713734 AATTCAAGTTGGTGAAGATGATGAT 57.286 32.000 2.34 0.00 40.72 2.45
762 1079 7.713734 ATTCAAGTTGGTGAAGATGATGATT 57.286 32.000 2.34 0.00 40.72 2.57
763 1080 7.528996 TTCAAGTTGGTGAAGATGATGATTT 57.471 32.000 2.34 0.00 32.56 2.17
764 1081 8.634335 TTCAAGTTGGTGAAGATGATGATTTA 57.366 30.769 2.34 0.00 32.56 1.40
765 1082 8.272545 TCAAGTTGGTGAAGATGATGATTTAG 57.727 34.615 2.34 0.00 0.00 1.85
766 1083 7.337689 TCAAGTTGGTGAAGATGATGATTTAGG 59.662 37.037 2.34 0.00 0.00 2.69
767 1084 5.591877 AGTTGGTGAAGATGATGATTTAGGC 59.408 40.000 0.00 0.00 0.00 3.93
768 1085 5.378230 TGGTGAAGATGATGATTTAGGCT 57.622 39.130 0.00 0.00 0.00 4.58
769 1086 5.128205 TGGTGAAGATGATGATTTAGGCTG 58.872 41.667 0.00 0.00 0.00 4.85
770 1087 4.518211 GGTGAAGATGATGATTTAGGCTGG 59.482 45.833 0.00 0.00 0.00 4.85
771 1088 4.023365 GTGAAGATGATGATTTAGGCTGGC 60.023 45.833 0.00 0.00 0.00 4.85
772 1089 3.870538 AGATGATGATTTAGGCTGGCA 57.129 42.857 3.38 0.00 0.00 4.92
773 1090 3.484407 AGATGATGATTTAGGCTGGCAC 58.516 45.455 3.38 0.00 0.00 5.01
774 1091 1.667236 TGATGATTTAGGCTGGCACG 58.333 50.000 3.38 0.00 0.00 5.34
775 1092 0.947244 GATGATTTAGGCTGGCACGG 59.053 55.000 3.38 0.00 38.10 4.94
776 1093 0.255890 ATGATTTAGGCTGGCACGGT 59.744 50.000 3.38 0.00 36.83 4.83
777 1094 0.906066 TGATTTAGGCTGGCACGGTA 59.094 50.000 3.38 0.00 36.83 4.02
778 1095 1.488812 TGATTTAGGCTGGCACGGTAT 59.511 47.619 3.38 0.00 36.83 2.73
779 1096 2.092646 TGATTTAGGCTGGCACGGTATT 60.093 45.455 3.38 0.00 36.83 1.89
780 1097 1.745232 TTTAGGCTGGCACGGTATTG 58.255 50.000 3.38 0.00 36.83 1.90
781 1098 0.107410 TTAGGCTGGCACGGTATTGG 60.107 55.000 3.38 0.00 36.83 3.16
782 1099 1.978455 TAGGCTGGCACGGTATTGGG 61.978 60.000 3.38 0.00 36.83 4.12
783 1100 2.828549 GCTGGCACGGTATTGGGG 60.829 66.667 0.00 0.00 36.83 4.96
784 1101 2.674754 CTGGCACGGTATTGGGGT 59.325 61.111 0.00 0.00 0.00 4.95
785 1102 1.451387 CTGGCACGGTATTGGGGTC 60.451 63.158 0.00 0.00 0.00 4.46
786 1103 2.512974 GGCACGGTATTGGGGTCG 60.513 66.667 0.00 0.00 0.00 4.79
787 1104 2.266689 GCACGGTATTGGGGTCGT 59.733 61.111 0.00 0.00 36.19 4.34
788 1105 1.376295 GCACGGTATTGGGGTCGTT 60.376 57.895 0.00 0.00 33.31 3.85
789 1106 0.956902 GCACGGTATTGGGGTCGTTT 60.957 55.000 0.00 0.00 33.31 3.60
790 1107 0.800012 CACGGTATTGGGGTCGTTTG 59.200 55.000 0.00 0.00 33.31 2.93
791 1108 0.956902 ACGGTATTGGGGTCGTTTGC 60.957 55.000 0.00 0.00 31.38 3.68
792 1109 0.675522 CGGTATTGGGGTCGTTTGCT 60.676 55.000 0.00 0.00 0.00 3.91
793 1110 0.808755 GGTATTGGGGTCGTTTGCTG 59.191 55.000 0.00 0.00 0.00 4.41
794 1111 0.808755 GTATTGGGGTCGTTTGCTGG 59.191 55.000 0.00 0.00 0.00 4.85
795 1112 0.693622 TATTGGGGTCGTTTGCTGGA 59.306 50.000 0.00 0.00 0.00 3.86
796 1113 0.039618 ATTGGGGTCGTTTGCTGGAT 59.960 50.000 0.00 0.00 0.00 3.41
797 1114 0.178975 TTGGGGTCGTTTGCTGGATT 60.179 50.000 0.00 0.00 0.00 3.01
798 1115 0.178975 TGGGGTCGTTTGCTGGATTT 60.179 50.000 0.00 0.00 0.00 2.17
799 1116 0.526211 GGGGTCGTTTGCTGGATTTC 59.474 55.000 0.00 0.00 0.00 2.17
811 1128 5.587388 TGCTGGATTTCCTTGATTTGATC 57.413 39.130 0.00 0.00 36.82 2.92
821 1138 6.903883 TCCTTGATTTGATCGCTACTTAAC 57.096 37.500 0.00 0.00 0.00 2.01
822 1139 6.403049 TCCTTGATTTGATCGCTACTTAACA 58.597 36.000 0.00 0.00 0.00 2.41
829 1146 0.599558 TCGCTACTTAACAGGCGTGT 59.400 50.000 6.15 6.15 46.37 4.49
840 1157 0.957395 CAGGCGTGTGCTCAAAGGAT 60.957 55.000 0.00 0.00 42.25 3.24
859 1176 3.305335 GGATACACACAGGGTTTTGCAAG 60.305 47.826 0.00 0.00 0.00 4.01
872 1189 3.574354 TTTGCAAGCAAAAAGGGGAAT 57.426 38.095 17.03 0.00 42.16 3.01
893 1210 7.976175 GGGAATTCATTGTCACTTTTTCCTATC 59.024 37.037 7.93 0.00 33.51 2.08
897 1214 5.995282 TCATTGTCACTTTTTCCTATCGTGT 59.005 36.000 0.00 0.00 0.00 4.49
936 1257 3.039011 GAGAGCAATAGAGGTTGGGGTA 58.961 50.000 0.00 0.00 0.00 3.69
942 1263 4.261801 CAATAGAGGTTGGGGTACACTTG 58.738 47.826 0.00 0.00 0.00 3.16
943 1264 2.112279 AGAGGTTGGGGTACACTTGA 57.888 50.000 0.00 0.00 0.00 3.02
948 1269 2.624636 GTTGGGGTACACTTGATACGG 58.375 52.381 0.00 0.00 0.00 4.02
967 1288 4.074970 ACGGATTTCTTGCAGTGAATTCT 58.925 39.130 7.05 4.91 0.00 2.40
968 1289 5.245531 ACGGATTTCTTGCAGTGAATTCTA 58.754 37.500 7.05 0.00 0.00 2.10
970 1291 6.375455 ACGGATTTCTTGCAGTGAATTCTAAT 59.625 34.615 7.05 6.13 0.00 1.73
987 1308 8.664669 AATTCTAATGTCAGGTTGGGTTAATT 57.335 30.769 0.00 0.00 0.00 1.40
1068 1405 6.073657 TGTGCTCCGTGTTTTATTTAGTACAC 60.074 38.462 0.00 0.00 37.97 2.90
1069 1406 6.146673 GTGCTCCGTGTTTTATTTAGTACACT 59.853 38.462 0.00 0.00 38.91 3.55
1169 1507 1.527611 CACCCATGGCAGCATCGAT 60.528 57.895 6.09 0.00 0.00 3.59
1171 1509 2.322830 CCCATGGCAGCATCGATCG 61.323 63.158 9.36 9.36 0.00 3.69
1182 1520 2.063979 ATCGATCGGCCACCTTCCA 61.064 57.895 16.41 0.00 0.00 3.53
1183 1521 1.622607 ATCGATCGGCCACCTTCCAA 61.623 55.000 16.41 0.00 0.00 3.53
1187 1525 2.826777 ATCGGCCACCTTCCAAGCAG 62.827 60.000 2.24 0.00 0.00 4.24
1189 1527 3.376918 GCCACCTTCCAAGCAGCC 61.377 66.667 0.00 0.00 0.00 4.85
1190 1528 3.058160 CCACCTTCCAAGCAGCCG 61.058 66.667 0.00 0.00 0.00 5.52
1192 1530 4.269523 ACCTTCCAAGCAGCCGCA 62.270 61.111 0.00 0.00 42.27 5.69
1194 1532 2.768492 CCTTCCAAGCAGCCGCATC 61.768 63.158 0.00 0.00 42.27 3.91
1262 2670 5.713861 AGTTCAGCAAGCCATTATTTTCTCT 59.286 36.000 0.00 0.00 0.00 3.10
1263 2671 5.571784 TCAGCAAGCCATTATTTTCTCTG 57.428 39.130 0.00 0.00 0.00 3.35
1275 2683 7.809806 CCATTATTTTCTCTGTTTCTTGGACAC 59.190 37.037 0.00 0.00 0.00 3.67
1276 2684 5.774498 ATTTTCTCTGTTTCTTGGACACC 57.226 39.130 0.00 0.00 0.00 4.16
1295 2710 0.040692 CGCGCATCCATGGAGAAATG 60.041 55.000 21.33 14.36 0.00 2.32
1298 2713 1.268896 CGCATCCATGGAGAAATGTGC 60.269 52.381 21.33 21.12 0.00 4.57
1302 2717 2.726821 TCCATGGAGAAATGTGCTTCC 58.273 47.619 11.44 0.00 0.00 3.46
1304 2719 3.028850 CCATGGAGAAATGTGCTTCCAT 58.971 45.455 5.56 0.00 38.37 3.41
1305 2720 4.041740 CATGGAGAAATGTGCTTCCATG 57.958 45.455 15.50 15.50 45.40 3.66
1306 2721 3.438216 TGGAGAAATGTGCTTCCATGA 57.562 42.857 0.00 0.00 0.00 3.07
1307 2722 3.349927 TGGAGAAATGTGCTTCCATGAG 58.650 45.455 0.00 0.00 0.00 2.90
1309 2724 4.019411 TGGAGAAATGTGCTTCCATGAGTA 60.019 41.667 0.00 0.00 0.00 2.59
1310 2725 4.574013 GGAGAAATGTGCTTCCATGAGTAG 59.426 45.833 0.00 0.00 0.00 2.57
1337 2756 2.248248 AGTGAAGAATGGTCTGACGGA 58.752 47.619 1.07 0.00 33.05 4.69
1340 2759 3.186613 GTGAAGAATGGTCTGACGGAAAC 59.813 47.826 1.07 0.00 33.05 2.78
1388 2807 4.961511 TGCACACCCACGACGAGC 62.962 66.667 0.00 0.00 0.00 5.03
1396 2815 2.626780 CCACGACGAGCAGACCAGA 61.627 63.158 0.00 0.00 0.00 3.86
1438 2857 1.525995 CCACTGCGTGTTGGTTCCT 60.526 57.895 7.68 0.00 0.00 3.36
1481 2908 1.150827 CATCTTCAAGCAGCACGTGA 58.849 50.000 22.23 0.00 34.77 4.35
1543 2981 5.945191 TGATTTGCTACTGGATTCACAATGA 59.055 36.000 0.00 0.00 0.00 2.57
1548 2986 6.124340 TGCTACTGGATTCACAATGATTCAT 58.876 36.000 0.00 0.00 30.62 2.57
1549 2987 7.281841 TGCTACTGGATTCACAATGATTCATA 58.718 34.615 0.00 0.00 30.62 2.15
1550 2988 7.940688 TGCTACTGGATTCACAATGATTCATAT 59.059 33.333 0.00 0.00 30.62 1.78
1551 2989 9.440773 GCTACTGGATTCACAATGATTCATATA 57.559 33.333 0.00 0.00 30.62 0.86
1554 2992 9.631257 ACTGGATTCACAATGATTCATATACAA 57.369 29.630 0.00 0.00 30.62 2.41
1556 2994 9.631257 TGGATTCACAATGATTCATATACAAGT 57.369 29.630 0.00 0.00 30.62 3.16
1580 3180 4.836125 TTGACTTGCCTGTGATTTTCTC 57.164 40.909 0.00 0.00 0.00 2.87
1741 3354 5.757850 AGACCTTGACACTGTTTTTCATC 57.242 39.130 0.00 0.00 0.00 2.92
1772 3385 6.742559 TCATAATCCTACCTTCCCTGTAAC 57.257 41.667 0.00 0.00 0.00 2.50
1783 3396 2.547990 TCCCTGTAACTTCCTCTTCCC 58.452 52.381 0.00 0.00 0.00 3.97
1787 3400 2.237392 CTGTAACTTCCTCTTCCCCTGG 59.763 54.545 0.00 0.00 0.00 4.45
1889 3561 7.610305 TCTTAAAACCTCGGAGCATCTATTTTT 59.390 33.333 0.00 0.00 33.73 1.94
1993 3669 5.294552 GCCTATGACATACTGACAAACTTCC 59.705 44.000 0.00 0.00 0.00 3.46
2007 3683 1.234615 ACTTCCAACAACGATGGCGG 61.235 55.000 0.00 0.00 43.17 6.13
2148 3824 1.005347 GTTTGTCACGAACAGGACACG 60.005 52.381 2.71 0.00 43.22 4.49
2231 3915 9.388506 ACAAACTTATAGAAATGTCAGAGATGG 57.611 33.333 0.00 0.00 0.00 3.51
2333 4017 0.394565 AAGAGGCACAGTCACAGGTC 59.605 55.000 0.00 0.00 0.00 3.85
2339 4023 1.070134 GCACAGTCACAGGTCAGGTTA 59.930 52.381 0.00 0.00 0.00 2.85
2413 4102 7.308951 CCATTTACACACCTTTTTCGATAACCT 60.309 37.037 0.00 0.00 0.00 3.50
2414 4103 6.790285 TTACACACCTTTTTCGATAACCTC 57.210 37.500 0.00 0.00 0.00 3.85
2578 4270 1.135199 CATTCTGCTGGCATTCACACC 60.135 52.381 0.00 0.00 0.00 4.16
2656 4356 7.898725 CAACGATGCTAAATTACTCATTTCC 57.101 36.000 0.00 0.00 36.43 3.13
2657 4357 6.619801 ACGATGCTAAATTACTCATTTCCC 57.380 37.500 0.00 0.00 36.43 3.97
2658 4358 5.531287 ACGATGCTAAATTACTCATTTCCCC 59.469 40.000 0.00 0.00 36.43 4.81
2659 4359 5.048713 CGATGCTAAATTACTCATTTCCCCC 60.049 44.000 0.00 0.00 36.43 5.40
2660 4360 5.466127 TGCTAAATTACTCATTTCCCCCT 57.534 39.130 0.00 0.00 36.43 4.79
2661 4361 5.837829 TGCTAAATTACTCATTTCCCCCTT 58.162 37.500 0.00 0.00 36.43 3.95
2662 4362 5.891551 TGCTAAATTACTCATTTCCCCCTTC 59.108 40.000 0.00 0.00 36.43 3.46
2663 4363 5.891551 GCTAAATTACTCATTTCCCCCTTCA 59.108 40.000 0.00 0.00 36.43 3.02
2664 4364 6.039829 GCTAAATTACTCATTTCCCCCTTCAG 59.960 42.308 0.00 0.00 36.43 3.02
2666 4366 5.536497 ATTACTCATTTCCCCCTTCAGTT 57.464 39.130 0.00 0.00 0.00 3.16
2667 4367 3.903530 ACTCATTTCCCCCTTCAGTTT 57.096 42.857 0.00 0.00 0.00 2.66
2668 4368 4.199002 ACTCATTTCCCCCTTCAGTTTT 57.801 40.909 0.00 0.00 0.00 2.43
2671 4371 4.551671 TCATTTCCCCCTTCAGTTTTGAA 58.448 39.130 0.00 0.00 40.92 2.69
2673 4373 3.680777 TTCCCCCTTCAGTTTTGAACT 57.319 42.857 0.00 0.00 44.06 3.01
2674 4374 3.680777 TCCCCCTTCAGTTTTGAACTT 57.319 42.857 0.00 0.00 40.46 2.66
2675 4375 4.799715 TCCCCCTTCAGTTTTGAACTTA 57.200 40.909 0.00 0.00 40.46 2.24
2676 4376 5.132043 TCCCCCTTCAGTTTTGAACTTAA 57.868 39.130 0.00 0.00 40.46 1.85
2677 4377 5.711698 TCCCCCTTCAGTTTTGAACTTAAT 58.288 37.500 0.00 0.00 40.46 1.40
2678 4378 5.538433 TCCCCCTTCAGTTTTGAACTTAATG 59.462 40.000 0.00 0.00 40.46 1.90
2679 4379 5.230182 CCCCTTCAGTTTTGAACTTAATGC 58.770 41.667 0.00 0.00 40.46 3.56
2680 4380 5.011023 CCCCTTCAGTTTTGAACTTAATGCT 59.989 40.000 0.00 0.00 40.46 3.79
2681 4381 6.462909 CCCCTTCAGTTTTGAACTTAATGCTT 60.463 38.462 0.00 0.00 40.46 3.91
2684 4384 7.168135 CCTTCAGTTTTGAACTTAATGCTTCAC 59.832 37.037 0.00 0.00 40.46 3.18
2685 4385 7.333528 TCAGTTTTGAACTTAATGCTTCACT 57.666 32.000 0.00 0.00 40.46 3.41
2686 4386 7.195646 TCAGTTTTGAACTTAATGCTTCACTG 58.804 34.615 0.00 0.00 40.46 3.66
2687 4387 6.974622 CAGTTTTGAACTTAATGCTTCACTGT 59.025 34.615 0.00 0.00 40.46 3.55
2689 4389 6.942532 TTTGAACTTAATGCTTCACTGTCT 57.057 33.333 0.00 0.00 0.00 3.41
2690 4390 5.929697 TGAACTTAATGCTTCACTGTCTG 57.070 39.130 0.00 0.00 0.00 3.51
2693 4393 4.708177 ACTTAATGCTTCACTGTCTGTGT 58.292 39.130 9.41 0.00 46.27 3.72
2694 4394 5.126067 ACTTAATGCTTCACTGTCTGTGTT 58.874 37.500 9.41 0.07 46.27 3.32
2891 4592 0.249868 GGTTTGCTCCCAACCAAAGC 60.250 55.000 0.00 0.00 40.67 3.51
2904 4607 4.351111 CCAACCAAAGCCTATAGGTATCCT 59.649 45.833 20.10 5.76 37.71 3.24
2997 4702 3.561725 CCGAAAGCAAGAGAACATATCCC 59.438 47.826 0.00 0.00 0.00 3.85
3010 4715 2.301296 ACATATCCCTGCGATTCCTCAG 59.699 50.000 0.00 0.00 31.92 3.35
3043 4748 5.763698 AGAGAACATCTCATTGCATACCATG 59.236 40.000 9.82 0.00 45.73 3.66
3231 4938 7.677745 AGATTCTAATATGGTAGGCATGACTCT 59.322 37.037 2.95 0.00 0.00 3.24
3602 5343 3.136763 CTGGTACTGCACATCATCCATC 58.863 50.000 0.00 0.00 0.00 3.51
3603 5344 2.158769 TGGTACTGCACATCATCCATCC 60.159 50.000 0.00 0.00 0.00 3.51
3604 5345 2.158769 GGTACTGCACATCATCCATCCA 60.159 50.000 0.00 0.00 0.00 3.41
3605 5346 2.048444 ACTGCACATCATCCATCCAC 57.952 50.000 0.00 0.00 0.00 4.02
3606 5347 1.315690 CTGCACATCATCCATCCACC 58.684 55.000 0.00 0.00 0.00 4.61
3617 5358 0.031716 CCATCCACCCTCCTCTCTGA 60.032 60.000 0.00 0.00 0.00 3.27
3639 5380 6.092955 GATTCCATTAATCACATGCATGGT 57.907 37.500 29.41 13.14 43.10 3.55
3658 5399 6.036300 GCATGGTGAATGTTGTATTGGAATTG 59.964 38.462 0.00 0.00 38.65 2.32
3666 5407 4.895889 TGTTGTATTGGAATTGGGTGACAA 59.104 37.500 0.00 0.00 44.54 3.18
3678 5423 2.094675 GGGTGACAATTGAGGACATGG 58.905 52.381 13.59 0.00 0.00 3.66
3680 5425 3.157087 GGTGACAATTGAGGACATGGTT 58.843 45.455 13.59 0.00 0.00 3.67
3685 5430 3.321682 ACAATTGAGGACATGGTTGTTGG 59.678 43.478 13.59 0.00 35.79 3.77
3692 5437 2.200899 GACATGGTTGTTGGTGCAAAC 58.799 47.619 0.00 0.00 35.79 2.93
3694 5439 2.159114 ACATGGTTGTTGGTGCAAACTC 60.159 45.455 0.00 0.00 37.01 3.01
3695 5440 1.550327 TGGTTGTTGGTGCAAACTCA 58.450 45.000 3.11 0.00 37.01 3.41
4058 5911 3.507009 GACGAGACGACGAGGGGG 61.507 72.222 0.00 0.00 37.03 5.40
4205 6058 4.175516 TCACCACGTAATTAAGCTAACCG 58.824 43.478 0.00 0.00 0.00 4.44
4211 6064 6.408428 CACGTAATTAAGCTAACCGATTGTC 58.592 40.000 0.00 0.00 0.00 3.18
4222 6075 2.711542 ACCGATTGTCAGGATCCAAAC 58.288 47.619 15.82 11.89 0.00 2.93
4230 6083 5.042463 TGTCAGGATCCAAACAACACTAA 57.958 39.130 15.82 0.00 0.00 2.24
4231 6084 4.819630 TGTCAGGATCCAAACAACACTAAC 59.180 41.667 15.82 0.00 0.00 2.34
4232 6085 4.062293 TCAGGATCCAAACAACACTAACG 58.938 43.478 15.82 0.00 0.00 3.18
4233 6086 4.062293 CAGGATCCAAACAACACTAACGA 58.938 43.478 15.82 0.00 0.00 3.85
4234 6087 4.152402 CAGGATCCAAACAACACTAACGAG 59.848 45.833 15.82 0.00 0.00 4.18
4235 6088 4.039973 AGGATCCAAACAACACTAACGAGA 59.960 41.667 15.82 0.00 0.00 4.04
4236 6089 4.151867 GGATCCAAACAACACTAACGAGAC 59.848 45.833 6.95 0.00 0.00 3.36
4237 6090 4.126208 TCCAAACAACACTAACGAGACA 57.874 40.909 0.00 0.00 0.00 3.41
4238 6091 4.116961 TCCAAACAACACTAACGAGACAG 58.883 43.478 0.00 0.00 0.00 3.51
4241 6094 2.470821 ACAACACTAACGAGACAGCAC 58.529 47.619 0.00 0.00 0.00 4.40
4243 6096 2.708386 ACACTAACGAGACAGCACTC 57.292 50.000 0.00 0.00 0.00 3.51
4294 6318 7.836479 ACTGTAATAACATAGTACTCCCTCC 57.164 40.000 0.00 0.00 34.37 4.30
4295 6319 6.489361 ACTGTAATAACATAGTACTCCCTCCG 59.511 42.308 0.00 0.00 34.37 4.63
4296 6320 6.367983 TGTAATAACATAGTACTCCCTCCGT 58.632 40.000 0.00 0.00 31.08 4.69
4297 6321 6.835488 TGTAATAACATAGTACTCCCTCCGTT 59.165 38.462 0.00 0.00 31.08 4.44
4298 6322 6.402456 AATAACATAGTACTCCCTCCGTTC 57.598 41.667 0.00 0.00 0.00 3.95
4299 6323 2.664015 ACATAGTACTCCCTCCGTTCC 58.336 52.381 0.00 0.00 0.00 3.62
4300 6324 2.024655 ACATAGTACTCCCTCCGTTCCA 60.025 50.000 0.00 0.00 0.00 3.53
4301 6325 2.905415 TAGTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
4302 6326 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
4303 6327 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
4304 6328 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
4305 6329 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
4306 6330 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
4307 6331 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
4308 6332 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
4309 6333 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
4310 6334 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
4311 6335 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
4312 6336 3.124636 CCTCCGTTCCAAATTACTTGTCG 59.875 47.826 0.00 0.00 32.65 4.35
4313 6337 2.481185 TCCGTTCCAAATTACTTGTCGC 59.519 45.455 0.00 0.00 32.65 5.19
4314 6338 2.224549 CCGTTCCAAATTACTTGTCGCA 59.775 45.455 0.00 0.00 32.65 5.10
4315 6339 3.479006 CGTTCCAAATTACTTGTCGCAG 58.521 45.455 0.00 0.00 32.65 5.18
4316 6340 3.185594 CGTTCCAAATTACTTGTCGCAGA 59.814 43.478 0.00 0.00 32.65 4.26
4317 6341 4.319190 CGTTCCAAATTACTTGTCGCAGAA 60.319 41.667 0.00 0.00 39.69 3.02
4318 6342 5.516090 GTTCCAAATTACTTGTCGCAGAAA 58.484 37.500 0.00 0.00 39.69 2.52
4319 6343 5.957842 TCCAAATTACTTGTCGCAGAAAT 57.042 34.783 0.00 0.00 39.69 2.17
4320 6344 5.698832 TCCAAATTACTTGTCGCAGAAATG 58.301 37.500 0.00 0.00 39.69 2.32
4321 6345 4.858692 CCAAATTACTTGTCGCAGAAATGG 59.141 41.667 0.00 0.00 39.69 3.16
4322 6346 5.335583 CCAAATTACTTGTCGCAGAAATGGA 60.336 40.000 0.00 0.00 39.69 3.41
4323 6347 6.324819 CAAATTACTTGTCGCAGAAATGGAT 58.675 36.000 0.00 0.00 39.69 3.41
4324 6348 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
4325 6349 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
4326 6350 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
4327 6351 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
4328 6352 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
4329 6353 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
4330 6354 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
4331 6355 5.912892 TGTCGCAGAAATGGATGTATCTAA 58.087 37.500 0.00 0.00 39.69 2.10
4332 6356 6.345298 TGTCGCAGAAATGGATGTATCTAAA 58.655 36.000 0.00 0.00 39.69 1.85
4333 6357 6.821160 TGTCGCAGAAATGGATGTATCTAAAA 59.179 34.615 0.00 0.00 39.69 1.52
4334 6358 7.126398 GTCGCAGAAATGGATGTATCTAAAAC 58.874 38.462 0.00 0.00 39.69 2.43
4335 6359 7.011482 GTCGCAGAAATGGATGTATCTAAAACT 59.989 37.037 0.00 0.00 39.69 2.66
4336 6360 7.011389 TCGCAGAAATGGATGTATCTAAAACTG 59.989 37.037 0.00 0.00 0.00 3.16
4337 6361 7.420800 GCAGAAATGGATGTATCTAAAACTGG 58.579 38.462 0.00 0.00 0.00 4.00
4338 6362 7.283127 GCAGAAATGGATGTATCTAAAACTGGA 59.717 37.037 0.00 0.00 0.00 3.86
4339 6363 9.177608 CAGAAATGGATGTATCTAAAACTGGAA 57.822 33.333 0.00 0.00 0.00 3.53
4340 6364 9.927081 AGAAATGGATGTATCTAAAACTGGAAT 57.073 29.630 0.00 0.00 0.00 3.01
4345 6369 9.778741 TGGATGTATCTAAAACTGGAATACATC 57.221 33.333 18.68 18.68 43.89 3.06
4357 6381 8.727100 AACTGGAATACATCTAGATACATCCA 57.273 34.615 19.51 19.51 38.88 3.41
4358 6382 8.907829 ACTGGAATACATCTAGATACATCCAT 57.092 34.615 20.34 12.60 38.88 3.41
4359 6383 9.997172 ACTGGAATACATCTAGATACATCCATA 57.003 33.333 20.34 7.19 38.88 2.74
4365 6389 7.036996 ACATCTAGATACATCCATATCTGCG 57.963 40.000 4.54 0.00 41.17 5.18
4366 6390 6.830838 ACATCTAGATACATCCATATCTGCGA 59.169 38.462 4.54 3.39 41.17 5.10
4367 6391 6.685527 TCTAGATACATCCATATCTGCGAC 57.314 41.667 5.70 0.00 41.17 5.19
4368 6392 6.180472 TCTAGATACATCCATATCTGCGACA 58.820 40.000 5.70 0.00 41.17 4.35
4369 6393 5.728637 AGATACATCCATATCTGCGACAA 57.271 39.130 0.00 0.00 39.87 3.18
4370 6394 5.718146 AGATACATCCATATCTGCGACAAG 58.282 41.667 0.00 0.00 39.87 3.16
4371 6395 3.827008 ACATCCATATCTGCGACAAGT 57.173 42.857 0.00 0.00 0.00 3.16
4372 6396 4.937201 ACATCCATATCTGCGACAAGTA 57.063 40.909 0.00 0.00 0.00 2.24
4373 6397 5.276461 ACATCCATATCTGCGACAAGTAA 57.724 39.130 0.00 0.00 0.00 2.24
4374 6398 5.858381 ACATCCATATCTGCGACAAGTAAT 58.142 37.500 0.00 0.00 0.00 1.89
4375 6399 6.291377 ACATCCATATCTGCGACAAGTAATT 58.709 36.000 0.00 0.00 0.00 1.40
4376 6400 6.425114 ACATCCATATCTGCGACAAGTAATTC 59.575 38.462 0.00 0.00 0.00 2.17
4377 6401 4.982295 TCCATATCTGCGACAAGTAATTCG 59.018 41.667 0.00 0.00 38.31 3.34
4378 6402 4.982295 CCATATCTGCGACAAGTAATTCGA 59.018 41.667 0.00 0.00 37.43 3.71
4379 6403 5.462068 CCATATCTGCGACAAGTAATTCGAA 59.538 40.000 0.00 0.00 37.43 3.71
4380 6404 6.019075 CCATATCTGCGACAAGTAATTCGAAA 60.019 38.462 0.00 0.00 37.43 3.46
4381 6405 4.640805 TCTGCGACAAGTAATTCGAAAC 57.359 40.909 0.00 0.00 37.43 2.78
4382 6406 3.120616 TCTGCGACAAGTAATTCGAAACG 59.879 43.478 0.00 0.09 37.43 3.60
4383 6407 2.156117 TGCGACAAGTAATTCGAAACGG 59.844 45.455 0.00 0.00 37.43 4.44
4384 6408 2.409378 GCGACAAGTAATTCGAAACGGA 59.591 45.455 0.00 0.00 37.43 4.69
4385 6409 3.481467 GCGACAAGTAATTCGAAACGGAG 60.481 47.826 0.00 0.00 37.43 4.63
4386 6410 3.060363 CGACAAGTAATTCGAAACGGAGG 59.940 47.826 0.00 0.00 37.43 4.30
4387 6411 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
4388 6412 3.007182 ACAAGTAATTCGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
4389 6413 3.521947 AGTAATTCGAAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
4390 6414 2.830321 AGTAATTCGAAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
4391 6415 4.019174 AGTAATTCGAAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
4392 6416 3.521947 AATTCGAAACGGAGGGAGTAG 57.478 47.619 0.00 0.00 0.00 2.57
4393 6417 2.205022 TTCGAAACGGAGGGAGTAGA 57.795 50.000 0.00 0.00 0.00 2.59
4394 6418 2.431954 TCGAAACGGAGGGAGTAGAT 57.568 50.000 0.00 0.00 0.00 1.98
4395 6419 2.022195 TCGAAACGGAGGGAGTAGATG 58.978 52.381 0.00 0.00 0.00 2.90
4396 6420 1.067212 CGAAACGGAGGGAGTAGATGG 59.933 57.143 0.00 0.00 0.00 3.51
4397 6421 0.831307 AAACGGAGGGAGTAGATGGC 59.169 55.000 0.00 0.00 0.00 4.40
4398 6422 0.032017 AACGGAGGGAGTAGATGGCT 60.032 55.000 0.00 0.00 0.00 4.75
4399 6423 0.851469 ACGGAGGGAGTAGATGGCTA 59.149 55.000 0.00 0.00 0.00 3.93
4400 6424 1.429687 ACGGAGGGAGTAGATGGCTAT 59.570 52.381 0.00 0.00 0.00 2.97
4431 6455 5.762711 GGGTGAAATTTTGTGGTTTGCTTAT 59.237 36.000 0.00 0.00 0.00 1.73
4442 6466 9.871238 TTTGTGGTTTGCTTATTTTTGTTACTA 57.129 25.926 0.00 0.00 0.00 1.82
4443 6467 8.859517 TGTGGTTTGCTTATTTTTGTTACTAC 57.140 30.769 0.00 0.00 0.00 2.73
4444 6468 8.688151 TGTGGTTTGCTTATTTTTGTTACTACT 58.312 29.630 0.00 0.00 0.00 2.57
4485 6509 1.575419 TGCGTTACTAGGGGATTGGT 58.425 50.000 0.00 0.00 0.00 3.67
4499 6523 5.723887 AGGGGATTGGTTGCAATATGTTTTA 59.276 36.000 0.59 0.00 0.00 1.52
4636 6677 6.823286 TGAGATGGTCCCATGTATCTTTTA 57.177 37.500 2.93 0.00 36.70 1.52
4674 6715 4.499037 TTTCATGCATATGCTGAGATGC 57.501 40.909 27.13 2.32 45.43 3.91
4675 6716 2.433436 TCATGCATATGCTGAGATGCC 58.567 47.619 27.13 0.00 44.74 4.40
4697 6738 4.083324 CCGTGTGTGCATGTTAGAGAAATT 60.083 41.667 0.00 0.00 0.00 1.82
4711 6752 7.339721 TGTTAGAGAAATTTACACAAACCACCA 59.660 33.333 0.00 0.00 0.00 4.17
4712 6753 6.391227 AGAGAAATTTACACAAACCACCAG 57.609 37.500 0.00 0.00 0.00 4.00
4713 6754 5.891551 AGAGAAATTTACACAAACCACCAGT 59.108 36.000 0.00 0.00 0.00 4.00
4714 6755 6.379988 AGAGAAATTTACACAAACCACCAGTT 59.620 34.615 0.00 0.00 41.81 3.16
4731 7145 4.081917 ACCAGTTTTTGTGGTCGAATTTGT 60.082 37.500 0.00 0.00 45.74 2.83
4740 7154 7.687005 TTGTGGTCGAATTTGTTCAAAATAC 57.313 32.000 2.11 0.00 0.00 1.89
4795 7209 3.520187 CAATCCTTTGCAGTTGGCC 57.480 52.632 0.00 0.00 43.89 5.36
4796 7210 0.680618 CAATCCTTTGCAGTTGGCCA 59.319 50.000 0.00 0.00 43.89 5.36
4797 7211 1.070445 CAATCCTTTGCAGTTGGCCAA 59.930 47.619 16.05 16.05 43.89 4.52
4806 7220 0.680618 CAGTTGGCCAAAATCCAGCA 59.319 50.000 22.47 0.00 37.29 4.41
4808 7222 1.276989 AGTTGGCCAAAATCCAGCATG 59.723 47.619 22.47 0.00 37.29 4.06
4823 7237 2.724520 CATGGCCTACCCTGCAATC 58.275 57.895 3.32 0.00 33.59 2.67
4835 7249 0.592637 CTGCAATCCGCTGTTGTTCA 59.407 50.000 0.00 0.00 43.06 3.18
4836 7250 1.200716 CTGCAATCCGCTGTTGTTCAT 59.799 47.619 0.00 0.00 43.06 2.57
4872 7286 2.819284 GCCGCCCTACTTGCCCTAT 61.819 63.158 0.00 0.00 0.00 2.57
4941 9385 0.808125 TTGATGCGGCCACATGTTAC 59.192 50.000 11.90 0.00 0.00 2.50
4954 9398 5.406780 GCCACATGTTACAGTATCATCTAGC 59.593 44.000 0.00 2.24 0.00 3.42
4957 9401 6.360947 CACATGTTACAGTATCATCTAGCGAC 59.639 42.308 0.00 0.00 0.00 5.19
4964 9408 7.470289 ACAGTATCATCTAGCGACAAAATTC 57.530 36.000 0.00 0.00 0.00 2.17
4965 9409 7.268586 ACAGTATCATCTAGCGACAAAATTCT 58.731 34.615 0.00 0.00 0.00 2.40
4979 9423 7.081349 CGACAAAATTCTGTGCTATACCAAAA 58.919 34.615 0.00 0.00 0.00 2.44
4980 9424 7.060633 CGACAAAATTCTGTGCTATACCAAAAC 59.939 37.037 0.00 0.00 0.00 2.43
4991 9435 0.600782 TACCAAAACAGCGTCGGTCC 60.601 55.000 0.00 0.00 0.00 4.46
5057 9501 1.938577 AGCATTCTCAGCACGCTATTG 59.061 47.619 0.00 0.00 0.00 1.90
5059 9503 2.538333 GCATTCTCAGCACGCTATTGTG 60.538 50.000 0.00 0.00 42.81 3.33
5060 9504 2.455674 TTCTCAGCACGCTATTGTGT 57.544 45.000 0.00 0.00 41.94 3.72
5069 9513 4.120646 CACGCTATTGTGTGCTATTAGC 57.879 45.455 8.80 8.80 45.84 3.09
5142 9587 4.887655 TGTGCTCCTCTCGTGATATTCTTA 59.112 41.667 0.00 0.00 0.00 2.10
5143 9588 5.216648 GTGCTCCTCTCGTGATATTCTTAC 58.783 45.833 0.00 0.00 0.00 2.34
5144 9589 4.278669 TGCTCCTCTCGTGATATTCTTACC 59.721 45.833 0.00 0.00 0.00 2.85
5147 9592 6.376018 GCTCCTCTCGTGATATTCTTACCTAT 59.624 42.308 0.00 0.00 0.00 2.57
5148 9593 7.627513 GCTCCTCTCGTGATATTCTTACCTATG 60.628 44.444 0.00 0.00 0.00 2.23
5149 9594 6.659668 TCCTCTCGTGATATTCTTACCTATGG 59.340 42.308 0.00 0.00 0.00 2.74
5150 9595 6.268825 TCTCGTGATATTCTTACCTATGGC 57.731 41.667 0.00 0.00 0.00 4.40
5156 9608 3.931907 ATTCTTACCTATGGCTGCACA 57.068 42.857 0.50 0.00 0.00 4.57
5180 9632 0.674895 ACTCTGCAGGAAATGGCGTC 60.675 55.000 15.13 0.00 0.00 5.19
5183 9635 3.140814 GCAGGAAATGGCGTCCCC 61.141 66.667 0.00 0.00 35.59 4.81
5186 9638 2.238701 AGGAAATGGCGTCCCCCTT 61.239 57.895 0.00 0.00 35.59 3.95
5187 9639 1.753078 GGAAATGGCGTCCCCCTTC 60.753 63.158 0.00 0.00 0.00 3.46
5188 9640 1.753078 GAAATGGCGTCCCCCTTCC 60.753 63.158 0.00 0.00 0.00 3.46
5190 9642 2.087857 AAATGGCGTCCCCCTTCCAA 62.088 55.000 0.00 0.00 31.66 3.53
5191 9643 2.781431 AATGGCGTCCCCCTTCCAAC 62.781 60.000 0.00 0.00 31.66 3.77
5193 9645 2.114411 GCGTCCCCCTTCCAACAA 59.886 61.111 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 8.970859 AAAAGGAGAGACCAACATCAATATAG 57.029 34.615 0.00 0.00 42.04 1.31
113 116 3.341823 ACAGCTAGGTTCAATCAGCAAG 58.658 45.455 0.00 0.00 36.47 4.01
117 120 3.997021 ACGAAACAGCTAGGTTCAATCAG 59.003 43.478 12.42 1.53 44.43 2.90
159 162 6.418226 GCTAACTTTCAGGACATACTATGACG 59.582 42.308 2.90 0.00 0.00 4.35
233 236 5.301551 GTCATATCATCAGACCTCAGTCAGT 59.698 44.000 0.00 0.00 46.15 3.41
281 284 3.559171 GCCAGACATAAAACCTCAGGACA 60.559 47.826 0.00 0.00 0.00 4.02
356 364 6.420008 CCAAGATGGCAACTAGTATAACGTAC 59.580 42.308 0.00 0.00 37.61 3.67
368 376 1.688197 CAAACCACCAAGATGGCAACT 59.312 47.619 0.00 0.00 44.33 3.16
371 379 2.299582 CAATCAAACCACCAAGATGGCA 59.700 45.455 0.00 0.00 44.33 4.92
372 380 2.299867 ACAATCAAACCACCAAGATGGC 59.700 45.455 0.00 0.00 44.33 4.40
373 381 4.082245 GGTACAATCAAACCACCAAGATGG 60.082 45.833 0.00 0.00 46.10 3.51
375 383 4.735369 TGGTACAATCAAACCACCAAGAT 58.265 39.130 0.00 0.00 40.84 2.40
377 385 4.616953 GTTGGTACAATCAAACCACCAAG 58.383 43.478 4.80 0.00 46.84 3.61
431 439 2.416678 CGTGCAAGCAAAAGGCCA 59.583 55.556 5.01 0.00 46.50 5.36
435 443 3.926497 CAGGCGTGCAAGCAAAAG 58.074 55.556 25.75 8.51 39.27 2.27
467 704 5.230182 GGAAATTTGGAAGACATTGTCCAC 58.770 41.667 13.14 7.58 43.67 4.02
468 705 4.283212 GGGAAATTTGGAAGACATTGTCCA 59.717 41.667 13.14 2.43 42.27 4.02
474 711 4.686891 TCCATGGGAAATTTGGAAGACAT 58.313 39.130 13.02 0.00 0.00 3.06
492 792 1.460305 AGCCTGCCGACCTATCCAT 60.460 57.895 0.00 0.00 0.00 3.41
547 851 2.328473 GAATTCGCTGCCAAAAAGTCC 58.672 47.619 0.00 0.00 0.00 3.85
550 854 2.730550 AGGAATTCGCTGCCAAAAAG 57.269 45.000 0.00 0.00 0.00 2.27
568 872 5.058008 GCATGTTTTCGTTTCGTTGTCATAG 59.942 40.000 0.00 0.00 0.00 2.23
577 894 2.570169 ACATCGCATGTTTTCGTTTCG 58.430 42.857 0.00 0.00 41.63 3.46
590 907 2.287393 AGCACACGTATAACATCGCA 57.713 45.000 0.00 0.00 0.00 5.10
595 912 3.529634 GCACAAAGCACACGTATAACA 57.470 42.857 0.00 0.00 44.79 2.41
632 949 1.534163 GCCGTACCACTTTCCTTTCAC 59.466 52.381 0.00 0.00 0.00 3.18
639 956 2.029649 TCTGTACTGCCGTACCACTTTC 60.030 50.000 14.85 0.00 44.27 2.62
664 981 1.592669 ATGTAGATCGTGCGCCTGC 60.593 57.895 4.18 0.00 43.20 4.85
668 985 1.592669 AGCCATGTAGATCGTGCGC 60.593 57.895 0.00 0.00 32.99 6.09
670 987 1.502163 GCCAGCCATGTAGATCGTGC 61.502 60.000 0.00 0.00 0.00 5.34
671 988 1.217585 CGCCAGCCATGTAGATCGTG 61.218 60.000 0.00 0.00 0.00 4.35
672 989 1.068083 CGCCAGCCATGTAGATCGT 59.932 57.895 0.00 0.00 0.00 3.73
673 990 0.037882 ATCGCCAGCCATGTAGATCG 60.038 55.000 0.00 0.00 0.00 3.69
674 991 1.270518 ACATCGCCAGCCATGTAGATC 60.271 52.381 0.74 0.00 31.20 2.75
675 992 0.761187 ACATCGCCAGCCATGTAGAT 59.239 50.000 0.74 0.00 31.20 1.98
676 993 0.179076 CACATCGCCAGCCATGTAGA 60.179 55.000 2.49 0.00 31.78 2.59
677 994 1.162181 CCACATCGCCAGCCATGTAG 61.162 60.000 2.49 0.00 31.78 2.74
678 995 1.153188 CCACATCGCCAGCCATGTA 60.153 57.895 2.49 0.00 31.78 2.29
679 996 2.438975 CCACATCGCCAGCCATGT 60.439 61.111 0.00 0.00 33.29 3.21
680 997 2.124612 TCCACATCGCCAGCCATG 60.125 61.111 0.00 0.00 0.00 3.66
681 998 2.124570 GTCCACATCGCCAGCCAT 60.125 61.111 0.00 0.00 0.00 4.40
682 999 4.758251 CGTCCACATCGCCAGCCA 62.758 66.667 0.00 0.00 0.00 4.75
684 1001 4.760047 ACCGTCCACATCGCCAGC 62.760 66.667 0.00 0.00 0.00 4.85
685 1002 2.047274 AACCGTCCACATCGCCAG 60.047 61.111 0.00 0.00 0.00 4.85
686 1003 2.047655 GAACCGTCCACATCGCCA 60.048 61.111 0.00 0.00 0.00 5.69
687 1004 0.953960 AAAGAACCGTCCACATCGCC 60.954 55.000 0.00 0.00 0.00 5.54
688 1005 0.442699 GAAAGAACCGTCCACATCGC 59.557 55.000 0.00 0.00 0.00 4.58
689 1006 1.790755 TGAAAGAACCGTCCACATCG 58.209 50.000 0.00 0.00 0.00 3.84
690 1007 2.225727 GGTTGAAAGAACCGTCCACATC 59.774 50.000 0.00 0.00 0.00 3.06
691 1008 2.158667 AGGTTGAAAGAACCGTCCACAT 60.159 45.455 0.00 0.00 44.82 3.21
692 1009 1.210967 AGGTTGAAAGAACCGTCCACA 59.789 47.619 0.00 0.00 44.82 4.17
693 1010 1.602377 CAGGTTGAAAGAACCGTCCAC 59.398 52.381 0.00 0.00 44.82 4.02
694 1011 1.476110 CCAGGTTGAAAGAACCGTCCA 60.476 52.381 0.00 0.00 44.82 4.02
695 1012 1.235724 CCAGGTTGAAAGAACCGTCC 58.764 55.000 0.00 0.00 44.82 4.79
696 1013 0.591659 GCCAGGTTGAAAGAACCGTC 59.408 55.000 0.00 0.00 44.82 4.79
697 1014 1.164041 CGCCAGGTTGAAAGAACCGT 61.164 55.000 0.00 0.00 44.82 4.83
698 1015 1.164041 ACGCCAGGTTGAAAGAACCG 61.164 55.000 0.00 0.00 44.82 4.44
699 1016 0.310854 CACGCCAGGTTGAAAGAACC 59.689 55.000 0.00 0.00 40.58 3.62
700 1017 1.305201 TCACGCCAGGTTGAAAGAAC 58.695 50.000 0.00 0.00 0.00 3.01
701 1018 2.270352 ATCACGCCAGGTTGAAAGAA 57.730 45.000 0.00 0.00 0.00 2.52
702 1019 2.270352 AATCACGCCAGGTTGAAAGA 57.730 45.000 0.00 0.00 0.00 2.52
703 1020 3.308530 GAAAATCACGCCAGGTTGAAAG 58.691 45.455 0.00 0.00 0.00 2.62
704 1021 2.287308 CGAAAATCACGCCAGGTTGAAA 60.287 45.455 0.00 0.00 0.00 2.69
705 1022 1.265635 CGAAAATCACGCCAGGTTGAA 59.734 47.619 0.00 0.00 0.00 2.69
706 1023 0.871722 CGAAAATCACGCCAGGTTGA 59.128 50.000 0.00 0.00 0.00 3.18
707 1024 0.591170 ACGAAAATCACGCCAGGTTG 59.409 50.000 0.00 0.00 0.00 3.77
708 1025 0.591170 CACGAAAATCACGCCAGGTT 59.409 50.000 0.00 0.00 0.00 3.50
709 1026 0.250124 TCACGAAAATCACGCCAGGT 60.250 50.000 0.00 0.00 0.00 4.00
710 1027 0.443869 CTCACGAAAATCACGCCAGG 59.556 55.000 0.00 0.00 0.00 4.45
711 1028 1.391485 CTCTCACGAAAATCACGCCAG 59.609 52.381 0.00 0.00 0.00 4.85
712 1029 1.000394 TCTCTCACGAAAATCACGCCA 60.000 47.619 0.00 0.00 0.00 5.69
713 1030 1.710013 TCTCTCACGAAAATCACGCC 58.290 50.000 0.00 0.00 0.00 5.68
714 1031 2.159827 GGTTCTCTCACGAAAATCACGC 60.160 50.000 0.00 0.00 0.00 5.34
715 1032 3.057019 TGGTTCTCTCACGAAAATCACG 58.943 45.455 0.00 0.00 0.00 4.35
716 1033 5.418310 TTTGGTTCTCTCACGAAAATCAC 57.582 39.130 0.00 0.00 0.00 3.06
717 1034 6.262049 TGAATTTGGTTCTCTCACGAAAATCA 59.738 34.615 0.00 0.00 34.05 2.57
718 1035 6.668323 TGAATTTGGTTCTCTCACGAAAATC 58.332 36.000 0.00 0.00 37.72 2.17
719 1036 6.633500 TGAATTTGGTTCTCTCACGAAAAT 57.367 33.333 0.00 0.00 37.72 1.82
720 1037 6.094881 ACTTGAATTTGGTTCTCTCACGAAAA 59.905 34.615 0.00 0.00 37.72 2.29
721 1038 5.588648 ACTTGAATTTGGTTCTCTCACGAAA 59.411 36.000 0.00 0.00 37.72 3.46
722 1039 5.123227 ACTTGAATTTGGTTCTCTCACGAA 58.877 37.500 0.00 0.00 37.72 3.85
723 1040 4.703897 ACTTGAATTTGGTTCTCTCACGA 58.296 39.130 0.00 0.00 37.72 4.35
724 1041 5.207768 CAACTTGAATTTGGTTCTCTCACG 58.792 41.667 0.00 0.00 37.72 4.35
725 1042 5.523369 CCAACTTGAATTTGGTTCTCTCAC 58.477 41.667 6.17 0.00 39.03 3.51
726 1043 5.772825 CCAACTTGAATTTGGTTCTCTCA 57.227 39.130 6.17 0.00 39.03 3.27
735 1052 7.372714 TCATCATCTTCACCAACTTGAATTTG 58.627 34.615 0.00 0.00 34.96 2.32
736 1053 7.528996 TCATCATCTTCACCAACTTGAATTT 57.471 32.000 0.00 0.00 34.96 1.82
737 1054 7.713734 ATCATCATCTTCACCAACTTGAATT 57.286 32.000 0.00 0.00 34.96 2.17
738 1055 7.713734 AATCATCATCTTCACCAACTTGAAT 57.286 32.000 0.00 0.00 34.96 2.57
739 1056 7.528996 AAATCATCATCTTCACCAACTTGAA 57.471 32.000 0.00 0.00 34.30 2.69
740 1057 7.337689 CCTAAATCATCATCTTCACCAACTTGA 59.662 37.037 0.00 0.00 0.00 3.02
741 1058 7.478322 CCTAAATCATCATCTTCACCAACTTG 58.522 38.462 0.00 0.00 0.00 3.16
742 1059 6.096001 GCCTAAATCATCATCTTCACCAACTT 59.904 38.462 0.00 0.00 0.00 2.66
743 1060 5.591877 GCCTAAATCATCATCTTCACCAACT 59.408 40.000 0.00 0.00 0.00 3.16
744 1061 5.591877 AGCCTAAATCATCATCTTCACCAAC 59.408 40.000 0.00 0.00 0.00 3.77
745 1062 5.591472 CAGCCTAAATCATCATCTTCACCAA 59.409 40.000 0.00 0.00 0.00 3.67
746 1063 5.128205 CAGCCTAAATCATCATCTTCACCA 58.872 41.667 0.00 0.00 0.00 4.17
747 1064 4.518211 CCAGCCTAAATCATCATCTTCACC 59.482 45.833 0.00 0.00 0.00 4.02
748 1065 4.023365 GCCAGCCTAAATCATCATCTTCAC 60.023 45.833 0.00 0.00 0.00 3.18
749 1066 4.139786 GCCAGCCTAAATCATCATCTTCA 58.860 43.478 0.00 0.00 0.00 3.02
750 1067 4.023365 GTGCCAGCCTAAATCATCATCTTC 60.023 45.833 0.00 0.00 0.00 2.87
751 1068 3.887716 GTGCCAGCCTAAATCATCATCTT 59.112 43.478 0.00 0.00 0.00 2.40
752 1069 3.484407 GTGCCAGCCTAAATCATCATCT 58.516 45.455 0.00 0.00 0.00 2.90
753 1070 2.225019 CGTGCCAGCCTAAATCATCATC 59.775 50.000 0.00 0.00 0.00 2.92
754 1071 2.224606 CGTGCCAGCCTAAATCATCAT 58.775 47.619 0.00 0.00 0.00 2.45
755 1072 1.667236 CGTGCCAGCCTAAATCATCA 58.333 50.000 0.00 0.00 0.00 3.07
756 1073 0.947244 CCGTGCCAGCCTAAATCATC 59.053 55.000 0.00 0.00 0.00 2.92
757 1074 0.255890 ACCGTGCCAGCCTAAATCAT 59.744 50.000 0.00 0.00 0.00 2.45
758 1075 0.906066 TACCGTGCCAGCCTAAATCA 59.094 50.000 0.00 0.00 0.00 2.57
759 1076 2.256117 ATACCGTGCCAGCCTAAATC 57.744 50.000 0.00 0.00 0.00 2.17
760 1077 2.297701 CAATACCGTGCCAGCCTAAAT 58.702 47.619 0.00 0.00 0.00 1.40
761 1078 1.680555 CCAATACCGTGCCAGCCTAAA 60.681 52.381 0.00 0.00 0.00 1.85
762 1079 0.107410 CCAATACCGTGCCAGCCTAA 60.107 55.000 0.00 0.00 0.00 2.69
763 1080 1.524961 CCAATACCGTGCCAGCCTA 59.475 57.895 0.00 0.00 0.00 3.93
764 1081 2.272146 CCAATACCGTGCCAGCCT 59.728 61.111 0.00 0.00 0.00 4.58
765 1082 2.828549 CCCAATACCGTGCCAGCC 60.829 66.667 0.00 0.00 0.00 4.85
766 1083 2.828549 CCCCAATACCGTGCCAGC 60.829 66.667 0.00 0.00 0.00 4.85
767 1084 1.451387 GACCCCAATACCGTGCCAG 60.451 63.158 0.00 0.00 0.00 4.85
768 1085 2.672295 GACCCCAATACCGTGCCA 59.328 61.111 0.00 0.00 0.00 4.92
769 1086 2.512974 CGACCCCAATACCGTGCC 60.513 66.667 0.00 0.00 0.00 5.01
770 1087 0.956902 AAACGACCCCAATACCGTGC 60.957 55.000 0.00 0.00 35.28 5.34
771 1088 0.800012 CAAACGACCCCAATACCGTG 59.200 55.000 0.00 0.00 35.28 4.94
772 1089 0.956902 GCAAACGACCCCAATACCGT 60.957 55.000 0.00 0.00 36.77 4.83
773 1090 0.675522 AGCAAACGACCCCAATACCG 60.676 55.000 0.00 0.00 0.00 4.02
774 1091 0.808755 CAGCAAACGACCCCAATACC 59.191 55.000 0.00 0.00 0.00 2.73
775 1092 0.808755 CCAGCAAACGACCCCAATAC 59.191 55.000 0.00 0.00 0.00 1.89
776 1093 0.693622 TCCAGCAAACGACCCCAATA 59.306 50.000 0.00 0.00 0.00 1.90
777 1094 0.039618 ATCCAGCAAACGACCCCAAT 59.960 50.000 0.00 0.00 0.00 3.16
778 1095 0.178975 AATCCAGCAAACGACCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
779 1096 0.178975 AAATCCAGCAAACGACCCCA 60.179 50.000 0.00 0.00 0.00 4.96
780 1097 0.526211 GAAATCCAGCAAACGACCCC 59.474 55.000 0.00 0.00 0.00 4.95
781 1098 0.526211 GGAAATCCAGCAAACGACCC 59.474 55.000 0.00 0.00 35.64 4.46
782 1099 1.534729 AGGAAATCCAGCAAACGACC 58.465 50.000 1.67 0.00 38.89 4.79
783 1100 2.552315 TCAAGGAAATCCAGCAAACGAC 59.448 45.455 1.67 0.00 38.89 4.34
784 1101 2.857483 TCAAGGAAATCCAGCAAACGA 58.143 42.857 1.67 0.00 38.89 3.85
785 1102 3.855689 ATCAAGGAAATCCAGCAAACG 57.144 42.857 1.67 0.00 38.89 3.60
786 1103 5.540911 TCAAATCAAGGAAATCCAGCAAAC 58.459 37.500 1.67 0.00 38.89 2.93
787 1104 5.804944 TCAAATCAAGGAAATCCAGCAAA 57.195 34.783 1.67 0.00 38.89 3.68
788 1105 5.393352 CGATCAAATCAAGGAAATCCAGCAA 60.393 40.000 1.67 0.00 38.89 3.91
789 1106 4.096833 CGATCAAATCAAGGAAATCCAGCA 59.903 41.667 1.67 0.00 38.89 4.41
790 1107 4.604976 CGATCAAATCAAGGAAATCCAGC 58.395 43.478 1.67 0.00 38.89 4.85
791 1108 4.337555 AGCGATCAAATCAAGGAAATCCAG 59.662 41.667 1.67 0.00 38.89 3.86
792 1109 4.272489 AGCGATCAAATCAAGGAAATCCA 58.728 39.130 1.67 0.00 38.89 3.41
793 1110 4.907879 AGCGATCAAATCAAGGAAATCC 57.092 40.909 0.00 0.00 0.00 3.01
794 1111 6.610741 AGTAGCGATCAAATCAAGGAAATC 57.389 37.500 0.00 0.00 0.00 2.17
795 1112 8.398665 GTTAAGTAGCGATCAAATCAAGGAAAT 58.601 33.333 0.00 0.00 0.00 2.17
796 1113 7.389330 TGTTAAGTAGCGATCAAATCAAGGAAA 59.611 33.333 0.00 0.00 0.00 3.13
797 1114 6.876789 TGTTAAGTAGCGATCAAATCAAGGAA 59.123 34.615 0.00 0.00 0.00 3.36
798 1115 6.403049 TGTTAAGTAGCGATCAAATCAAGGA 58.597 36.000 0.00 0.00 0.00 3.36
799 1116 6.238211 CCTGTTAAGTAGCGATCAAATCAAGG 60.238 42.308 0.00 0.00 0.00 3.61
821 1138 0.957395 ATCCTTTGAGCACACGCCTG 60.957 55.000 0.00 0.00 39.83 4.85
822 1139 0.613260 TATCCTTTGAGCACACGCCT 59.387 50.000 0.00 0.00 39.83 5.52
826 1143 3.813529 GTGTGTATCCTTTGAGCACAC 57.186 47.619 9.77 9.77 45.36 3.82
829 1146 2.290260 CCCTGTGTGTATCCTTTGAGCA 60.290 50.000 0.00 0.00 0.00 4.26
840 1157 1.407258 GCTTGCAAAACCCTGTGTGTA 59.593 47.619 0.00 0.00 0.00 2.90
859 1176 4.452114 GTGACAATGAATTCCCCTTTTTGC 59.548 41.667 2.27 0.00 0.00 3.68
872 1189 6.485313 ACACGATAGGAAAAAGTGACAATGAA 59.515 34.615 0.69 0.00 43.77 2.57
905 1222 5.038033 CCTCTATTGCTCTCGTGTAAAGAC 58.962 45.833 0.00 0.00 0.00 3.01
906 1223 4.705507 ACCTCTATTGCTCTCGTGTAAAGA 59.294 41.667 0.00 0.00 0.00 2.52
907 1224 5.000012 ACCTCTATTGCTCTCGTGTAAAG 58.000 43.478 0.00 0.00 0.00 1.85
936 1257 4.323417 TGCAAGAAATCCGTATCAAGTGT 58.677 39.130 0.00 0.00 0.00 3.55
942 1263 5.741388 ATTCACTGCAAGAAATCCGTATC 57.259 39.130 5.47 0.00 37.43 2.24
943 1264 5.882557 AGAATTCACTGCAAGAAATCCGTAT 59.117 36.000 8.44 0.00 37.43 3.06
948 1269 8.239314 TGACATTAGAATTCACTGCAAGAAATC 58.761 33.333 8.44 6.87 37.43 2.17
987 1308 3.081061 CCGTTTCATCTTTCATGTGGGA 58.919 45.455 0.00 0.00 0.00 4.37
993 1314 3.696051 CCACCATCCGTTTCATCTTTCAT 59.304 43.478 0.00 0.00 0.00 2.57
994 1315 3.081061 CCACCATCCGTTTCATCTTTCA 58.919 45.455 0.00 0.00 0.00 2.69
995 1316 2.423538 CCCACCATCCGTTTCATCTTTC 59.576 50.000 0.00 0.00 0.00 2.62
996 1317 2.041081 TCCCACCATCCGTTTCATCTTT 59.959 45.455 0.00 0.00 0.00 2.52
997 1318 1.633432 TCCCACCATCCGTTTCATCTT 59.367 47.619 0.00 0.00 0.00 2.40
998 1319 1.210478 CTCCCACCATCCGTTTCATCT 59.790 52.381 0.00 0.00 0.00 2.90
999 1320 1.668419 CTCCCACCATCCGTTTCATC 58.332 55.000 0.00 0.00 0.00 2.92
1068 1405 2.225019 ACGCACTTTGCTTTCATCAGAG 59.775 45.455 0.00 0.00 42.25 3.35
1069 1406 2.221169 ACGCACTTTGCTTTCATCAGA 58.779 42.857 0.00 0.00 42.25 3.27
1161 1499 2.650813 GAAGGTGGCCGATCGATGCT 62.651 60.000 18.66 0.00 0.00 3.79
1162 1500 2.203070 AAGGTGGCCGATCGATGC 60.203 61.111 18.66 12.47 0.00 3.91
1163 1501 1.595382 GGAAGGTGGCCGATCGATG 60.595 63.158 18.66 1.12 0.00 3.84
1166 1504 1.815421 CTTGGAAGGTGGCCGATCG 60.815 63.158 8.51 8.51 0.00 3.69
1169 1507 3.551496 CTGCTTGGAAGGTGGCCGA 62.551 63.158 0.00 0.00 0.00 5.54
1171 1509 3.376918 GCTGCTTGGAAGGTGGCC 61.377 66.667 0.00 0.00 0.00 5.36
1224 1562 4.259356 TGCTGAACTGAATGATGAAGAGG 58.741 43.478 0.00 0.00 0.00 3.69
1262 2670 2.539338 GCGCGGTGTCCAAGAAACA 61.539 57.895 8.83 0.00 0.00 2.83
1263 2671 1.852067 ATGCGCGGTGTCCAAGAAAC 61.852 55.000 8.83 0.00 0.00 2.78
1275 2683 1.168407 ATTTCTCCATGGATGCGCGG 61.168 55.000 16.63 2.02 0.00 6.46
1276 2684 0.040692 CATTTCTCCATGGATGCGCG 60.041 55.000 16.63 0.00 0.00 6.86
1295 2710 5.645497 ACTTTCAATCTACTCATGGAAGCAC 59.355 40.000 0.00 0.00 33.75 4.40
1298 2713 7.821359 TCTTCACTTTCAATCTACTCATGGAAG 59.179 37.037 0.00 0.00 36.06 3.46
1302 2717 8.396390 CCATTCTTCACTTTCAATCTACTCATG 58.604 37.037 0.00 0.00 0.00 3.07
1304 2719 7.453393 ACCATTCTTCACTTTCAATCTACTCA 58.547 34.615 0.00 0.00 0.00 3.41
1305 2720 7.821846 AGACCATTCTTCACTTTCAATCTACTC 59.178 37.037 0.00 0.00 0.00 2.59
1306 2721 7.605691 CAGACCATTCTTCACTTTCAATCTACT 59.394 37.037 0.00 0.00 0.00 2.57
1307 2722 7.604164 TCAGACCATTCTTCACTTTCAATCTAC 59.396 37.037 0.00 0.00 0.00 2.59
1309 2724 6.429385 GTCAGACCATTCTTCACTTTCAATCT 59.571 38.462 0.00 0.00 0.00 2.40
1310 2725 6.606768 GTCAGACCATTCTTCACTTTCAATC 58.393 40.000 0.00 0.00 0.00 2.67
1337 2756 4.088634 TGCATCCAGCCTAGATTTTGTTT 58.911 39.130 0.00 0.00 44.83 2.83
1340 2759 2.621998 CCTGCATCCAGCCTAGATTTTG 59.378 50.000 0.00 0.00 44.83 2.44
1388 2807 2.810852 GCCTGAAGAACTTTCTGGTCTG 59.189 50.000 12.44 0.00 42.96 3.51
1396 2815 1.543429 CCCGAGTGCCTGAAGAACTTT 60.543 52.381 0.00 0.00 0.00 2.66
1430 2849 2.263540 GCCGTAGCGAGGAACCAA 59.736 61.111 0.00 0.00 0.00 3.67
1481 2908 6.209192 CAGCACATTAGATAGAGATCCTCACT 59.791 42.308 0.00 0.00 32.06 3.41
1523 2960 5.945191 TGAATCATTGTGAATCCAGTAGCAA 59.055 36.000 0.00 0.00 0.00 3.91
1530 2967 9.631257 ACTTGTATATGAATCATTGTGAATCCA 57.369 29.630 0.00 0.00 0.00 3.41
1554 2992 6.491403 AGAAAATCACAGGCAAGTCAATTACT 59.509 34.615 0.00 0.00 41.49 2.24
1555 2993 6.681777 AGAAAATCACAGGCAAGTCAATTAC 58.318 36.000 0.00 0.00 0.00 1.89
1556 2994 6.716628 AGAGAAAATCACAGGCAAGTCAATTA 59.283 34.615 0.00 0.00 0.00 1.40
1557 2995 5.537674 AGAGAAAATCACAGGCAAGTCAATT 59.462 36.000 0.00 0.00 0.00 2.32
1558 2996 5.075493 AGAGAAAATCACAGGCAAGTCAAT 58.925 37.500 0.00 0.00 0.00 2.57
1560 2998 4.067896 GAGAGAAAATCACAGGCAAGTCA 58.932 43.478 0.00 0.00 0.00 3.41
1561 2999 3.438434 GGAGAGAAAATCACAGGCAAGTC 59.562 47.826 0.00 0.00 0.00 3.01
1562 3000 3.181440 TGGAGAGAAAATCACAGGCAAGT 60.181 43.478 0.00 0.00 0.00 3.16
1565 3165 2.290514 CCTGGAGAGAAAATCACAGGCA 60.291 50.000 0.00 0.00 43.78 4.75
1571 3171 3.498481 CCCACAACCTGGAGAGAAAATCA 60.498 47.826 0.00 0.00 43.95 2.57
1573 3173 2.225117 CCCCACAACCTGGAGAGAAAAT 60.225 50.000 0.00 0.00 43.95 1.82
1580 3180 0.838122 AGAGTCCCCACAACCTGGAG 60.838 60.000 0.00 0.00 43.95 3.86
1719 3332 5.192927 TGATGAAAAACAGTGTCAAGGTCT 58.807 37.500 0.00 0.00 0.00 3.85
1772 3385 1.362224 TGAACCAGGGGAAGAGGAAG 58.638 55.000 0.00 0.00 0.00 3.46
1783 3396 7.112779 ACCAGAAGTAAGAAATATGAACCAGG 58.887 38.462 0.00 0.00 0.00 4.45
1787 3400 8.794335 AAGGACCAGAAGTAAGAAATATGAAC 57.206 34.615 0.00 0.00 0.00 3.18
1822 3438 3.127203 TGTCGAAACAAATTCACCGTTGT 59.873 39.130 0.00 0.00 39.63 3.32
1823 3439 3.686128 TGTCGAAACAAATTCACCGTTG 58.314 40.909 0.00 0.00 37.96 4.10
1889 3561 8.125978 AGAATGAACCTGCAAATCATAAGAAA 57.874 30.769 8.47 0.00 33.60 2.52
1895 3567 6.608405 TCCATAAGAATGAACCTGCAAATCAT 59.392 34.615 3.41 3.41 34.84 2.45
1909 3585 2.360165 GCTGCCTTGGTCCATAAGAATG 59.640 50.000 0.00 0.00 0.00 2.67
1923 3599 0.689745 AATCATGCCATGGCTGCCTT 60.690 50.000 35.53 20.86 42.51 4.35
1926 3602 2.986311 CAAATCATGCCATGGCTGC 58.014 52.632 35.53 11.94 42.51 5.25
1993 3669 0.729140 GCTTTCCGCCATCGTTGTTG 60.729 55.000 0.00 0.00 0.00 3.33
2046 3722 4.731720 TCAATGTGTCGTAATGCCAAATG 58.268 39.130 0.00 0.00 0.00 2.32
2119 3795 4.115287 GTGACAAACACGCGCATC 57.885 55.556 5.73 0.00 39.78 3.91
2148 3824 2.514803 ACCTGTACATGCCAGTTTTCC 58.485 47.619 10.96 0.00 0.00 3.13
2387 4076 6.804783 GGTTATCGAAAAAGGTGTGTAAATGG 59.195 38.462 0.00 0.00 0.00 3.16
2413 4102 6.712998 TGAAGAAGAAATGGGAAAACATACGA 59.287 34.615 0.00 0.00 0.00 3.43
2414 4103 6.908825 TGAAGAAGAAATGGGAAAACATACG 58.091 36.000 0.00 0.00 0.00 3.06
2415 4104 8.110860 TCTGAAGAAGAAATGGGAAAACATAC 57.889 34.615 0.00 0.00 29.54 2.39
2416 4105 8.704849 TTCTGAAGAAGAAATGGGAAAACATA 57.295 30.769 0.00 0.00 42.09 2.29
2602 4294 6.642707 AATCAAGAACGGGTTGTGATTTTA 57.357 33.333 11.48 0.00 33.57 1.52
2644 4344 5.536497 AACTGAAGGGGGAAATGAGTAAT 57.464 39.130 0.00 0.00 0.00 1.89
2645 4345 5.333566 AAACTGAAGGGGGAAATGAGTAA 57.666 39.130 0.00 0.00 0.00 2.24
2646 4346 5.076873 CAAAACTGAAGGGGGAAATGAGTA 58.923 41.667 0.00 0.00 0.00 2.59
2648 4348 4.151883 TCAAAACTGAAGGGGGAAATGAG 58.848 43.478 0.00 0.00 0.00 2.90
2649 4349 4.191804 TCAAAACTGAAGGGGGAAATGA 57.808 40.909 0.00 0.00 0.00 2.57
2650 4350 4.344968 AGTTCAAAACTGAAGGGGGAAATG 59.655 41.667 0.00 0.00 41.01 2.32
2651 4351 4.556697 AGTTCAAAACTGAAGGGGGAAAT 58.443 39.130 0.00 0.00 41.01 2.17
2652 4352 3.989056 AGTTCAAAACTGAAGGGGGAAA 58.011 40.909 0.00 0.00 41.01 3.13
2653 4353 3.680777 AGTTCAAAACTGAAGGGGGAA 57.319 42.857 0.00 0.00 41.01 3.97
2656 4356 5.011023 AGCATTAAGTTCAAAACTGAAGGGG 59.989 40.000 4.31 0.00 41.91 4.79
2657 4357 6.089249 AGCATTAAGTTCAAAACTGAAGGG 57.911 37.500 4.31 0.00 41.91 3.95
2658 4358 7.168135 GTGAAGCATTAAGTTCAAAACTGAAGG 59.832 37.037 0.00 0.00 41.91 3.46
2659 4359 7.917505 AGTGAAGCATTAAGTTCAAAACTGAAG 59.082 33.333 0.00 0.00 41.91 3.02
2660 4360 7.701924 CAGTGAAGCATTAAGTTCAAAACTGAA 59.298 33.333 0.00 0.00 41.91 3.02
2661 4361 7.148086 ACAGTGAAGCATTAAGTTCAAAACTGA 60.148 33.333 0.00 0.00 41.91 3.41
2662 4362 6.974622 ACAGTGAAGCATTAAGTTCAAAACTG 59.025 34.615 0.00 0.00 41.91 3.16
2663 4363 7.067494 AGACAGTGAAGCATTAAGTTCAAAACT 59.933 33.333 0.00 0.00 45.46 2.66
2664 4364 7.166473 CAGACAGTGAAGCATTAAGTTCAAAAC 59.834 37.037 0.00 0.00 34.52 2.43
2666 4366 6.318648 ACAGACAGTGAAGCATTAAGTTCAAA 59.681 34.615 0.00 0.00 34.52 2.69
2667 4367 5.822519 ACAGACAGTGAAGCATTAAGTTCAA 59.177 36.000 0.00 0.00 34.52 2.69
2668 4368 5.368145 ACAGACAGTGAAGCATTAAGTTCA 58.632 37.500 0.00 0.00 0.00 3.18
2923 4626 6.716934 ATCGTCACAAGAATACCTACAGAT 57.283 37.500 0.00 0.00 0.00 2.90
2926 4629 7.833786 AGTTAATCGTCACAAGAATACCTACA 58.166 34.615 0.00 0.00 0.00 2.74
3025 4730 3.305131 GCCACATGGTATGCAATGAGATG 60.305 47.826 5.03 0.00 37.57 2.90
3026 4731 2.889045 GCCACATGGTATGCAATGAGAT 59.111 45.455 5.03 0.00 37.57 2.75
3027 4732 2.300433 GCCACATGGTATGCAATGAGA 58.700 47.619 5.03 0.00 37.57 3.27
3028 4733 2.025898 TGCCACATGGTATGCAATGAG 58.974 47.619 5.03 0.00 37.57 2.90
3029 4734 2.140839 TGCCACATGGTATGCAATGA 57.859 45.000 5.03 0.00 37.57 2.57
3031 4736 3.198200 ACATTTGCCACATGGTATGCAAT 59.802 39.130 12.20 0.00 42.66 3.56
3032 4737 2.566279 ACATTTGCCACATGGTATGCAA 59.434 40.909 8.69 8.69 41.57 4.08
3033 4738 2.177734 ACATTTGCCACATGGTATGCA 58.822 42.857 0.00 0.00 37.57 3.96
3034 4739 2.965572 ACATTTGCCACATGGTATGC 57.034 45.000 0.00 0.00 37.57 3.14
3035 4740 4.818642 TCAAACATTTGCCACATGGTATG 58.181 39.130 0.00 4.41 38.05 2.39
3036 4741 5.480642 TTCAAACATTTGCCACATGGTAT 57.519 34.783 0.00 0.00 38.05 2.73
3037 4742 4.944619 TTCAAACATTTGCCACATGGTA 57.055 36.364 0.00 0.00 38.05 3.25
3038 4743 3.834489 TTCAAACATTTGCCACATGGT 57.166 38.095 0.00 0.00 38.05 3.55
3039 4744 4.334759 TGTTTTCAAACATTTGCCACATGG 59.665 37.500 0.79 0.00 43.45 3.66
3051 4756 9.959749 GACTATAAATCTTGGTGTTTTCAAACA 57.040 29.630 0.79 0.79 45.88 2.83
3306 5035 4.201930 ACTGAGACGAATCGGTTACATCTC 60.202 45.833 7.80 9.45 35.17 2.75
3482 5218 1.407258 GTCTTGAGGATGGGAGTCGAG 59.593 57.143 0.00 0.00 0.00 4.04
3555 5291 2.996621 GAGTTGTCGTTGCATAAGCTCT 59.003 45.455 0.00 0.00 42.74 4.09
3602 5343 1.127343 GGAATCAGAGAGGAGGGTGG 58.873 60.000 0.00 0.00 0.00 4.61
3603 5344 1.871418 TGGAATCAGAGAGGAGGGTG 58.129 55.000 0.00 0.00 0.00 4.61
3604 5345 2.885388 ATGGAATCAGAGAGGAGGGT 57.115 50.000 0.00 0.00 0.00 4.34
3605 5346 5.803552 GATTAATGGAATCAGAGAGGAGGG 58.196 45.833 0.00 0.00 43.16 4.30
3617 5358 5.599242 TCACCATGCATGTGATTAATGGAAT 59.401 36.000 24.58 0.00 40.23 3.01
3637 5378 5.046663 ACCCAATTCCAATACAACATTCACC 60.047 40.000 0.00 0.00 0.00 4.02
3638 5379 5.868801 CACCCAATTCCAATACAACATTCAC 59.131 40.000 0.00 0.00 0.00 3.18
3639 5380 5.777223 TCACCCAATTCCAATACAACATTCA 59.223 36.000 0.00 0.00 0.00 2.57
3658 5399 2.094675 CCATGTCCTCAATTGTCACCC 58.905 52.381 5.13 0.00 0.00 4.61
3666 5407 2.892852 CACCAACAACCATGTCCTCAAT 59.107 45.455 0.00 0.00 39.40 2.57
3668 5409 1.979855 CACCAACAACCATGTCCTCA 58.020 50.000 0.00 0.00 39.40 3.86
3669 5410 0.598065 GCACCAACAACCATGTCCTC 59.402 55.000 0.00 0.00 39.40 3.71
3673 5418 1.830477 AGTTTGCACCAACAACCATGT 59.170 42.857 4.19 0.00 43.14 3.21
3678 5423 2.529151 CTGTGAGTTTGCACCAACAAC 58.471 47.619 4.19 0.00 37.99 3.32
3680 5425 1.102154 CCTGTGAGTTTGCACCAACA 58.898 50.000 4.19 0.00 37.99 3.33
3685 5430 0.038892 CATGCCCTGTGAGTTTGCAC 60.039 55.000 0.00 0.00 39.22 4.57
3695 5440 4.349503 TTCTGCGCCATGCCCTGT 62.350 61.111 4.18 0.00 45.60 4.00
3720 5465 2.497675 AGTGCACGTAGATCATGAACCT 59.502 45.455 12.01 2.68 0.00 3.50
4205 6058 4.520492 AGTGTTGTTTGGATCCTGACAATC 59.480 41.667 25.79 21.85 34.86 2.67
4211 6064 4.062293 TCGTTAGTGTTGTTTGGATCCTG 58.938 43.478 14.23 0.00 0.00 3.86
4222 6075 2.726760 GAGTGCTGTCTCGTTAGTGTTG 59.273 50.000 0.00 0.00 0.00 3.33
4230 6083 1.032794 TTGAGTGAGTGCTGTCTCGT 58.967 50.000 0.00 0.00 37.28 4.18
4231 6084 2.140065 TTTGAGTGAGTGCTGTCTCG 57.860 50.000 0.00 0.00 37.28 4.04
4232 6085 3.722147 TCTTTTGAGTGAGTGCTGTCTC 58.278 45.455 0.00 0.00 35.28 3.36
4233 6086 3.827008 TCTTTTGAGTGAGTGCTGTCT 57.173 42.857 0.00 0.00 0.00 3.41
4234 6087 4.882671 TTTCTTTTGAGTGAGTGCTGTC 57.117 40.909 0.00 0.00 0.00 3.51
4235 6088 5.643379 TTTTTCTTTTGAGTGAGTGCTGT 57.357 34.783 0.00 0.00 0.00 4.40
4281 6305 3.393426 TTGGAACGGAGGGAGTACTAT 57.607 47.619 0.00 0.00 0.00 2.12
4285 6309 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
4286 6310 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
4287 6311 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
4288 6312 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
4290 6314 3.124636 CGACAAGTAATTTGGAACGGAGG 59.875 47.826 0.00 0.00 41.25 4.30
4291 6315 3.424433 GCGACAAGTAATTTGGAACGGAG 60.424 47.826 0.00 0.00 41.25 4.63
4292 6316 2.481185 GCGACAAGTAATTTGGAACGGA 59.519 45.455 0.00 0.00 41.25 4.69
4293 6317 2.224549 TGCGACAAGTAATTTGGAACGG 59.775 45.455 0.00 0.00 41.25 4.44
4294 6318 3.185594 TCTGCGACAAGTAATTTGGAACG 59.814 43.478 0.00 0.00 41.25 3.95
4295 6319 4.742438 TCTGCGACAAGTAATTTGGAAC 57.258 40.909 0.00 0.00 41.25 3.62
4296 6320 5.759506 TTTCTGCGACAAGTAATTTGGAA 57.240 34.783 0.00 0.00 41.25 3.53
4297 6321 5.335583 CCATTTCTGCGACAAGTAATTTGGA 60.336 40.000 0.00 0.00 41.25 3.53
4298 6322 4.858692 CCATTTCTGCGACAAGTAATTTGG 59.141 41.667 0.00 0.00 41.25 3.28
4299 6323 5.698832 TCCATTTCTGCGACAAGTAATTTG 58.301 37.500 0.00 0.00 42.68 2.32
4300 6324 5.957842 TCCATTTCTGCGACAAGTAATTT 57.042 34.783 0.00 0.00 0.00 1.82
4301 6325 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
4302 6326 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
4303 6327 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
4304 6328 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
4305 6329 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
4306 6330 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
4307 6331 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
4308 6332 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
4309 6333 6.844696 TTTAGATACATCCATTTCTGCGAC 57.155 37.500 0.00 0.00 0.00 5.19
4310 6334 7.011389 CAGTTTTAGATACATCCATTTCTGCGA 59.989 37.037 0.00 0.00 0.00 5.10
4311 6335 7.128331 CAGTTTTAGATACATCCATTTCTGCG 58.872 38.462 0.00 0.00 0.00 5.18
4312 6336 7.283127 TCCAGTTTTAGATACATCCATTTCTGC 59.717 37.037 0.00 0.00 0.00 4.26
4313 6337 8.737168 TCCAGTTTTAGATACATCCATTTCTG 57.263 34.615 0.00 0.00 0.00 3.02
4314 6338 9.927081 ATTCCAGTTTTAGATACATCCATTTCT 57.073 29.630 0.00 0.00 0.00 2.52
4319 6343 9.778741 GATGTATTCCAGTTTTAGATACATCCA 57.221 33.333 17.60 0.00 41.21 3.41
4331 6355 9.159254 TGGATGTATCTAGATGTATTCCAGTTT 57.841 33.333 15.79 0.00 0.00 2.66
4332 6356 8.727100 TGGATGTATCTAGATGTATTCCAGTT 57.273 34.615 15.79 0.00 0.00 3.16
4333 6357 8.907829 ATGGATGTATCTAGATGTATTCCAGT 57.092 34.615 22.26 13.74 0.00 4.00
4339 6363 8.791675 CGCAGATATGGATGTATCTAGATGTAT 58.208 37.037 15.79 9.11 38.93 2.29
4340 6364 7.993183 TCGCAGATATGGATGTATCTAGATGTA 59.007 37.037 15.79 4.44 38.93 2.29
4341 6365 6.830838 TCGCAGATATGGATGTATCTAGATGT 59.169 38.462 15.79 1.25 38.93 3.06
4342 6366 7.138081 GTCGCAGATATGGATGTATCTAGATG 58.862 42.308 15.79 0.00 38.93 2.90
4343 6367 6.830838 TGTCGCAGATATGGATGTATCTAGAT 59.169 38.462 10.73 10.73 38.93 1.98
4344 6368 6.180472 TGTCGCAGATATGGATGTATCTAGA 58.820 40.000 0.00 0.00 38.93 2.43
4345 6369 6.442513 TGTCGCAGATATGGATGTATCTAG 57.557 41.667 0.00 0.00 38.93 2.43
4346 6370 6.434340 ACTTGTCGCAGATATGGATGTATCTA 59.566 38.462 0.00 0.00 38.93 1.98
4347 6371 5.244851 ACTTGTCGCAGATATGGATGTATCT 59.755 40.000 0.00 0.00 41.03 1.98
4348 6372 5.473931 ACTTGTCGCAGATATGGATGTATC 58.526 41.667 0.00 0.00 40.67 2.24
4349 6373 5.474578 ACTTGTCGCAGATATGGATGTAT 57.525 39.130 0.00 0.00 40.67 2.29
4350 6374 4.937201 ACTTGTCGCAGATATGGATGTA 57.063 40.909 0.00 0.00 40.67 2.29
4351 6375 3.827008 ACTTGTCGCAGATATGGATGT 57.173 42.857 0.00 0.00 40.67 3.06
4352 6376 6.400409 CGAATTACTTGTCGCAGATATGGATG 60.400 42.308 0.00 0.00 40.67 3.51
4353 6377 5.635280 CGAATTACTTGTCGCAGATATGGAT 59.365 40.000 0.00 0.00 40.67 3.41
4354 6378 4.982295 CGAATTACTTGTCGCAGATATGGA 59.018 41.667 0.00 0.00 40.67 3.41
4355 6379 4.982295 TCGAATTACTTGTCGCAGATATGG 59.018 41.667 0.00 0.00 40.67 2.74
4356 6380 6.510746 TTCGAATTACTTGTCGCAGATATG 57.489 37.500 0.00 0.00 40.67 1.78
4357 6381 6.291637 CGTTTCGAATTACTTGTCGCAGATAT 60.292 38.462 0.00 0.00 40.67 1.63
4358 6382 5.004061 CGTTTCGAATTACTTGTCGCAGATA 59.996 40.000 0.00 0.00 40.67 1.98
4359 6383 4.201589 CGTTTCGAATTACTTGTCGCAGAT 60.202 41.667 0.00 0.00 40.67 2.90
4360 6384 3.120616 CGTTTCGAATTACTTGTCGCAGA 59.879 43.478 0.00 0.00 37.19 4.26
4361 6385 3.395671 CGTTTCGAATTACTTGTCGCAG 58.604 45.455 0.00 0.00 37.19 5.18
4362 6386 2.156117 CCGTTTCGAATTACTTGTCGCA 59.844 45.455 0.00 0.00 37.19 5.10
4363 6387 2.409378 TCCGTTTCGAATTACTTGTCGC 59.591 45.455 0.00 0.00 37.19 5.19
4364 6388 3.060363 CCTCCGTTTCGAATTACTTGTCG 59.940 47.826 0.00 0.00 38.62 4.35
4365 6389 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
4366 6390 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
4367 6391 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
4368 6392 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
4369 6393 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
4370 6394 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
4371 6395 4.272489 TCTACTCCCTCCGTTTCGAATTA 58.728 43.478 0.00 0.00 0.00 1.40
4372 6396 3.094572 TCTACTCCCTCCGTTTCGAATT 58.905 45.455 0.00 0.00 0.00 2.17
4373 6397 2.731572 TCTACTCCCTCCGTTTCGAAT 58.268 47.619 0.00 0.00 0.00 3.34
4374 6398 2.205022 TCTACTCCCTCCGTTTCGAA 57.795 50.000 0.00 0.00 0.00 3.71
4375 6399 2.022195 CATCTACTCCCTCCGTTTCGA 58.978 52.381 0.00 0.00 0.00 3.71
4376 6400 1.067212 CCATCTACTCCCTCCGTTTCG 59.933 57.143 0.00 0.00 0.00 3.46
4377 6401 1.202545 GCCATCTACTCCCTCCGTTTC 60.203 57.143 0.00 0.00 0.00 2.78
4378 6402 0.831307 GCCATCTACTCCCTCCGTTT 59.169 55.000 0.00 0.00 0.00 3.60
4379 6403 0.032017 AGCCATCTACTCCCTCCGTT 60.032 55.000 0.00 0.00 0.00 4.44
4380 6404 0.851469 TAGCCATCTACTCCCTCCGT 59.149 55.000 0.00 0.00 0.00 4.69
4381 6405 2.223803 ATAGCCATCTACTCCCTCCG 57.776 55.000 0.00 0.00 0.00 4.63
4382 6406 4.984146 AAAATAGCCATCTACTCCCTCC 57.016 45.455 0.00 0.00 0.00 4.30
4406 6430 2.616376 GCAAACCACAAAATTTCACCCC 59.384 45.455 0.00 0.00 0.00 4.95
4431 6455 6.092944 CGGGCATCATGTAGTAGTAACAAAAA 59.907 38.462 0.00 0.00 0.00 1.94
4442 6466 2.108976 CGGCGGGCATCATGTAGT 59.891 61.111 0.00 0.00 0.00 2.73
4443 6467 3.349006 GCGGCGGGCATCATGTAG 61.349 66.667 9.78 0.00 42.87 2.74
4466 6490 1.575419 ACCAATCCCCTAGTAACGCA 58.425 50.000 0.00 0.00 0.00 5.24
4472 6496 4.079212 ACATATTGCAACCAATCCCCTAGT 60.079 41.667 0.00 0.00 41.68 2.57
4539 6580 9.878667 TTCTCGTGTTACTCATCCAAATATTTA 57.121 29.630 0.00 0.00 0.00 1.40
4548 6589 7.088905 TCTTTTAGTTCTCGTGTTACTCATCC 58.911 38.462 0.00 0.00 0.00 3.51
4602 6643 9.745018 ACATGGGACCATCTCAATAATTAATAG 57.255 33.333 0.00 0.00 33.90 1.73
4636 6677 5.395546 GCATGAAAAATACCCACCATGACAT 60.396 40.000 0.00 0.00 34.87 3.06
4674 6715 2.078849 TCTCTAACATGCACACACGG 57.921 50.000 0.00 0.00 0.00 4.94
4675 6716 4.668576 ATTTCTCTAACATGCACACACG 57.331 40.909 0.00 0.00 0.00 4.49
4711 6752 5.715070 TGAACAAATTCGACCACAAAAACT 58.285 33.333 0.00 0.00 37.69 2.66
4712 6753 6.396459 TTGAACAAATTCGACCACAAAAAC 57.604 33.333 0.00 0.00 37.69 2.43
4713 6754 7.421530 TTTTGAACAAATTCGACCACAAAAA 57.578 28.000 0.00 0.00 37.69 1.94
4714 6755 7.602517 ATTTTGAACAAATTCGACCACAAAA 57.397 28.000 0.00 0.00 39.21 2.44
4715 6756 7.759886 TGTATTTTGAACAAATTCGACCACAAA 59.240 29.630 0.82 0.00 37.69 2.83
4740 7154 5.069485 GCTTTATGCAACAACAACAGTTG 57.931 39.130 12.03 12.03 46.86 3.16
4752 7166 7.175916 GCACCAATATGTGATGCTTTATGCAA 61.176 38.462 0.00 0.00 44.74 4.08
4753 7167 5.736777 GCACCAATATGTGATGCTTTATGCA 60.737 40.000 0.00 0.00 45.22 3.96
4754 7168 4.682860 GCACCAATATGTGATGCTTTATGC 59.317 41.667 0.00 0.00 38.55 3.14
4795 7209 1.410153 GGTAGGCCATGCTGGATTTTG 59.590 52.381 5.01 0.00 40.96 2.44
4796 7210 1.689258 GGGTAGGCCATGCTGGATTTT 60.689 52.381 5.01 0.00 40.96 1.82
4797 7211 0.106015 GGGTAGGCCATGCTGGATTT 60.106 55.000 5.01 0.00 40.96 2.17
4806 7220 1.538666 GGATTGCAGGGTAGGCCAT 59.461 57.895 5.01 0.00 36.17 4.40
4808 7222 2.203209 CGGATTGCAGGGTAGGCC 60.203 66.667 0.00 0.00 0.00 5.19
4823 7237 1.522668 TTCTCCATGAACAACAGCGG 58.477 50.000 0.00 0.00 0.00 5.52
4835 7249 2.954318 GGCTATTGCATGTGTTCTCCAT 59.046 45.455 0.66 0.00 41.91 3.41
4836 7250 2.368439 GGCTATTGCATGTGTTCTCCA 58.632 47.619 0.66 0.00 41.91 3.86
4846 7260 0.474184 AAGTAGGGCGGCTATTGCAT 59.526 50.000 9.56 0.00 41.91 3.96
4878 7292 2.184167 CAACAACACGGGGCGAAGT 61.184 57.895 0.00 0.00 0.00 3.01
4941 9385 7.223582 ACAGAATTTTGTCGCTAGATGATACTG 59.776 37.037 0.00 0.00 0.00 2.74
4954 9398 5.794687 TGGTATAGCACAGAATTTTGTCG 57.205 39.130 0.00 0.00 0.00 4.35
4957 9401 7.148755 GCTGTTTTGGTATAGCACAGAATTTTG 60.149 37.037 19.57 0.00 37.63 2.44
4964 9408 2.742053 ACGCTGTTTTGGTATAGCACAG 59.258 45.455 13.78 13.78 38.32 3.66
4965 9409 2.739913 GACGCTGTTTTGGTATAGCACA 59.260 45.455 3.60 0.00 35.98 4.57
4979 9423 1.549170 AGATTTTAGGACCGACGCTGT 59.451 47.619 0.00 0.00 0.00 4.40
4980 9424 1.927174 CAGATTTTAGGACCGACGCTG 59.073 52.381 0.00 0.00 0.00 5.18
5057 9501 2.205074 ACAGCATCGCTAATAGCACAC 58.795 47.619 13.15 0.00 42.58 3.82
5059 9503 2.410053 GCTACAGCATCGCTAATAGCAC 59.590 50.000 19.14 0.00 44.71 4.40
5060 9504 2.677199 GCTACAGCATCGCTAATAGCA 58.323 47.619 19.14 0.13 44.71 3.49
5061 9505 1.651138 CGCTACAGCATCGCTAATAGC 59.349 52.381 16.11 16.11 43.29 2.97
5068 9512 0.039074 ATAGGACGCTACAGCATCGC 60.039 55.000 1.61 0.00 42.21 4.58
5069 9513 2.423926 AATAGGACGCTACAGCATCG 57.576 50.000 1.61 0.00 42.21 3.84
5094 9538 3.753294 AGCTTCAGGGTAATATCACGG 57.247 47.619 0.00 0.00 0.00 4.94
5095 9540 4.238514 GCTAGCTTCAGGGTAATATCACG 58.761 47.826 7.70 0.00 0.00 4.35
5142 9587 2.496942 GCAATGTGCAGCCATAGGT 58.503 52.632 0.00 0.00 44.26 3.08
5162 9614 1.372087 GGACGCCATTTCCTGCAGAG 61.372 60.000 17.39 5.49 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.