Multiple sequence alignment - TraesCS4A01G339900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G339900 chr4A 100.000 4978 0 0 1 4978 621294334 621289357 0.000000e+00 9193.0
1 TraesCS4A01G339900 chr4A 82.449 490 53 18 4492 4978 309477521 309477062 1.000000e-106 398.0
2 TraesCS4A01G339900 chr4A 85.167 209 24 6 4208 4414 621271222 621271019 1.820000e-49 207.0
3 TraesCS4A01G339900 chr4A 86.982 169 7 6 1 154 621399177 621399009 5.120000e-40 176.0
4 TraesCS4A01G339900 chr4A 100.000 49 0 0 158 206 621324365 621324317 1.910000e-14 91.6
5 TraesCS4A01G339900 chr4A 100.000 28 0 0 1902 1929 702161378 702161405 9.000000e-03 52.8
6 TraesCS4A01G339900 chr5D 90.644 1817 86 37 2369 4126 549772349 549770558 0.000000e+00 2337.0
7 TraesCS4A01G339900 chr5D 83.147 1519 94 62 893 2314 549773816 549772363 0.000000e+00 1238.0
8 TraesCS4A01G339900 chr5D 94.907 216 8 1 4208 4423 549770559 549770347 7.980000e-88 335.0
9 TraesCS4A01G339900 chr5D 90.119 253 24 1 3567 3819 549770115 549769864 1.340000e-85 327.0
10 TraesCS4A01G339900 chr5D 95.288 191 9 0 3487 3677 549758233 549758043 2.250000e-78 303.0
11 TraesCS4A01G339900 chr5D 92.424 132 4 4 3996 4126 549677224 549677098 3.060000e-42 183.0
12 TraesCS4A01G339900 chr5D 74.692 569 50 37 392 892 549774404 549773862 3.080000e-37 167.0
13 TraesCS4A01G339900 chr5D 85.811 148 9 3 149 286 549774975 549774830 4.020000e-31 147.0
14 TraesCS4A01G339900 chr5D 88.119 101 3 4 10 101 549775578 549775478 1.460000e-20 111.0
15 TraesCS4A01G339900 chr5D 96.429 56 2 0 1 56 549794956 549794901 5.310000e-15 93.5
16 TraesCS4A01G339900 chr5B 89.857 1814 84 41 2382 4126 701277024 701275242 0.000000e+00 2239.0
17 TraesCS4A01G339900 chr5B 83.051 1121 81 41 1000 2080 701278376 701277325 0.000000e+00 917.0
18 TraesCS4A01G339900 chr5B 96.111 180 3 3 4208 4384 701275243 701275065 1.750000e-74 291.0
19 TraesCS4A01G339900 chr5B 95.200 125 3 1 4368 4492 701275050 701274929 1.410000e-45 195.0
20 TraesCS4A01G339900 chr5B 83.333 192 22 6 2108 2290 701277268 701277078 8.570000e-38 169.0
21 TraesCS4A01G339900 chr5B 94.444 90 5 0 65 154 701292055 701291966 6.720000e-29 139.0
22 TraesCS4A01G339900 chr5B 82.857 175 9 8 1 154 701280074 701279900 2.420000e-28 137.0
23 TraesCS4A01G339900 chr5B 80.676 207 13 15 714 894 701278809 701278604 8.690000e-28 135.0
24 TraesCS4A01G339900 chrUn 91.304 460 35 5 4521 4978 235691376 235690920 1.520000e-174 623.0
25 TraesCS4A01G339900 chrUn 91.304 460 35 5 4521 4978 248751594 248751138 1.520000e-174 623.0
26 TraesCS4A01G339900 chr2B 90.526 380 29 7 4488 4865 75731537 75731911 3.460000e-136 496.0
27 TraesCS4A01G339900 chr3D 84.836 488 42 15 4494 4978 141475211 141474753 3.510000e-126 462.0
28 TraesCS4A01G339900 chr3D 82.661 496 48 16 4486 4978 405523872 405523412 6.000000e-109 405.0
29 TraesCS4A01G339900 chr3D 75.831 331 62 13 2754 3072 536027821 536028145 8.630000e-33 152.0
30 TraesCS4A01G339900 chr7A 83.673 490 59 17 4493 4978 455695867 455696339 4.570000e-120 442.0
31 TraesCS4A01G339900 chr6D 83.636 495 45 16 4492 4978 38563835 38564301 2.750000e-117 433.0
32 TraesCS4A01G339900 chr6D 87.805 123 8 6 4117 4234 253929515 253929395 2.420000e-28 137.0
33 TraesCS4A01G339900 chr4B 92.580 283 18 3 4667 4948 429609425 429609145 2.160000e-108 403.0
34 TraesCS4A01G339900 chr4B 90.659 182 13 3 4492 4671 429609786 429609607 6.440000e-59 239.0
35 TraesCS4A01G339900 chr6B 90.706 269 23 2 4710 4978 280037740 280037474 1.700000e-94 357.0
36 TraesCS4A01G339900 chr6B 89.286 280 26 4 4699 4978 266830580 266830305 1.030000e-91 348.0
37 TraesCS4A01G339900 chr6A 92.593 108 6 2 4103 4209 73454822 73454928 2.400000e-33 154.0
38 TraesCS4A01G339900 chr7D 93.137 102 6 1 4122 4222 10560609 10560710 1.120000e-31 148.0
39 TraesCS4A01G339900 chr7B 89.256 121 10 2 4492 4610 78125646 78125527 1.120000e-31 148.0
40 TraesCS4A01G339900 chr7B 95.652 92 3 1 4120 4210 547474940 547475031 4.020000e-31 147.0
41 TraesCS4A01G339900 chr7B 95.652 92 3 1 4120 4210 547551601 547551692 4.020000e-31 147.0
42 TraesCS4A01G339900 chr7B 88.889 117 5 7 4125 4239 333415891 333416001 2.420000e-28 137.0
43 TraesCS4A01G339900 chr3A 89.167 120 11 2 4492 4610 6673391 6673273 1.120000e-31 148.0
44 TraesCS4A01G339900 chr3A 86.614 127 11 6 4106 4230 707615492 707615370 8.690000e-28 135.0
45 TraesCS4A01G339900 chr1B 88.034 117 10 4 4116 4231 564569632 564569745 8.690000e-28 135.0
46 TraesCS4A01G339900 chr2D 88.034 117 8 5 4125 4241 42402293 42402403 3.130000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G339900 chr4A 621289357 621294334 4977 True 9193.000000 9193 100.000000 1 4978 1 chr4A.!!$R3 4977
1 TraesCS4A01G339900 chr5D 549769864 549775578 5714 True 666.000000 2337 86.777000 10 4423 7 chr5D.!!$R4 4413
2 TraesCS4A01G339900 chr5B 701274929 701280074 5145 True 583.285714 2239 87.297857 1 4492 7 chr5B.!!$R2 4491
3 TraesCS4A01G339900 chr4B 429609145 429609786 641 True 321.000000 403 91.619500 4492 4948 2 chr4B.!!$R1 456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
589 1475 0.036199 AGAGCAAGAGCAGGAGCAAG 60.036 55.0 0.0 0.0 45.49 4.01 F
590 1476 0.036577 GAGCAAGAGCAGGAGCAAGA 60.037 55.0 0.0 0.0 45.49 3.02 F
591 1477 0.036199 AGCAAGAGCAGGAGCAAGAG 60.036 55.0 0.0 0.0 45.49 2.85 F
2360 3534 0.034059 ACCTCGCAGTGTTCTTGGAG 59.966 55.0 0.0 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2341 3515 0.034059 CTCCAAGAACACTGCGAGGT 59.966 55.0 0.0 0.0 0.00 3.85 R
2342 3516 0.034059 ACTCCAAGAACACTGCGAGG 59.966 55.0 0.0 0.0 0.00 4.63 R
2365 3539 0.034767 ATGCTGCTGTGCCTGTATGT 60.035 50.0 0.0 0.0 0.00 2.29 R
4028 5296 0.608640 TTCCACGAGAAGGAGAAGGC 59.391 55.0 0.0 0.0 36.33 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 62 1.553308 CTGCGCCTAACTAACGTACC 58.447 55.000 4.18 0.00 0.00 3.34
60 69 2.417787 CCTAACTAACGTACCACTGGCC 60.418 54.545 0.00 0.00 0.00 5.36
76 85 2.735772 GCCTGGAGCTCCATCGGAA 61.736 63.158 34.48 15.27 46.46 4.30
77 86 2.049627 GCCTGGAGCTCCATCGGAAT 62.050 60.000 34.48 0.00 46.46 3.01
79 88 0.755079 CTGGAGCTCCATCGGAATGA 59.245 55.000 35.11 9.73 46.46 2.57
84 102 2.551459 GAGCTCCATCGGAATGAATTGG 59.449 50.000 0.87 0.00 34.61 3.16
85 103 1.000938 GCTCCATCGGAATGAATTGGC 60.001 52.381 0.00 0.00 34.61 4.52
113 134 1.073284 GGTACAGGTTTTCCAGCCAGA 59.927 52.381 0.00 0.00 43.73 3.86
119 140 4.697756 TTTCCAGCCAGACCGCCG 62.698 66.667 0.00 0.00 0.00 6.46
137 158 3.186909 GCCGGATTAATCAAAGCCAAAC 58.813 45.455 17.07 0.00 44.35 2.93
141 163 5.418676 CGGATTAATCAAAGCCAAACCAAT 58.581 37.500 17.07 0.00 44.35 3.16
246 767 0.110644 CGACTGTTTGAAAGCGAGGC 60.111 55.000 0.00 0.00 0.00 4.70
255 776 0.179189 GAAAGCGAGGCCAATTGACG 60.179 55.000 5.01 8.26 0.00 4.35
256 777 0.605319 AAAGCGAGGCCAATTGACGA 60.605 50.000 5.01 0.00 0.00 4.20
276 797 1.525765 AACCAGCACGCACACATCA 60.526 52.632 0.00 0.00 0.00 3.07
307 842 1.505353 GACGGATCGAGGAACACGT 59.495 57.895 0.00 0.00 44.14 4.49
308 843 0.522915 GACGGATCGAGGAACACGTC 60.523 60.000 0.00 0.00 44.14 4.34
311 846 1.872679 GATCGAGGAACACGTCGCC 60.873 63.158 0.00 0.00 44.14 5.54
314 1154 2.264794 GAGGAACACGTCGCCCAT 59.735 61.111 0.00 0.00 0.00 4.00
317 1157 1.669760 GGAACACGTCGCCCATGAA 60.670 57.895 0.00 0.00 0.00 2.57
321 1161 1.374125 CACGTCGCCCATGAACAGA 60.374 57.895 0.00 0.00 0.00 3.41
326 1166 1.078918 CGCCCATGAACAGAGCAGA 60.079 57.895 0.00 0.00 0.00 4.26
332 1172 2.424557 CATGAACAGAGCAGAGCAGTT 58.575 47.619 0.00 0.00 0.00 3.16
333 1173 1.875009 TGAACAGAGCAGAGCAGTTG 58.125 50.000 0.00 0.00 0.00 3.16
346 1186 1.608590 AGCAGTTGTGTTGGTATGCAC 59.391 47.619 0.00 0.00 36.15 4.57
362 1202 1.654220 CACAACACAAGGGAAGCGG 59.346 57.895 0.00 0.00 0.00 5.52
363 1203 1.101049 CACAACACAAGGGAAGCGGT 61.101 55.000 0.00 0.00 0.00 5.68
408 1279 4.547367 GGACGGGCGGCTTGCTAT 62.547 66.667 9.56 0.00 45.43 2.97
409 1280 2.967615 GACGGGCGGCTTGCTATC 60.968 66.667 9.56 0.00 45.43 2.08
410 1281 4.891727 ACGGGCGGCTTGCTATCG 62.892 66.667 9.56 4.28 45.43 2.92
411 1282 4.891727 CGGGCGGCTTGCTATCGT 62.892 66.667 9.56 0.00 45.43 3.73
412 1283 2.967615 GGGCGGCTTGCTATCGTC 60.968 66.667 9.56 0.00 45.43 4.20
413 1284 3.330853 GGCGGCTTGCTATCGTCG 61.331 66.667 0.00 0.00 45.43 5.12
414 1285 3.989595 GCGGCTTGCTATCGTCGC 61.990 66.667 0.00 0.00 41.73 5.19
484 1358 2.270297 CTTTCAAAGCGATGGGGCCG 62.270 60.000 0.00 0.00 0.00 6.13
485 1359 4.794648 TCAAAGCGATGGGGCCGG 62.795 66.667 0.00 0.00 0.00 6.13
515 1400 3.012934 ACAACAAGCCAAGTACCACTT 57.987 42.857 0.00 0.00 39.39 3.16
522 1407 2.711547 AGCCAAGTACCACTTCCTTTCT 59.288 45.455 0.00 0.00 36.03 2.52
553 1439 2.112297 TTTTTGCGGGCGGAGACT 59.888 55.556 0.00 0.00 32.70 3.24
554 1440 1.527380 TTTTTGCGGGCGGAGACTT 60.527 52.632 0.00 0.00 32.70 3.01
555 1441 1.104577 TTTTTGCGGGCGGAGACTTT 61.105 50.000 0.00 0.00 32.70 2.66
556 1442 1.512156 TTTTGCGGGCGGAGACTTTC 61.512 55.000 0.00 0.00 32.70 2.62
557 1443 2.391724 TTTGCGGGCGGAGACTTTCT 62.392 55.000 0.00 0.00 32.70 2.52
573 1459 7.383843 GGAGACTTTCTTACTTTCTGTTGAGAG 59.616 40.741 0.00 0.00 0.00 3.20
576 1462 6.823689 ACTTTCTTACTTTCTGTTGAGAGCAA 59.176 34.615 0.00 0.00 0.00 3.91
577 1463 6.851222 TTCTTACTTTCTGTTGAGAGCAAG 57.149 37.500 0.00 0.00 34.01 4.01
578 1464 6.161855 TCTTACTTTCTGTTGAGAGCAAGA 57.838 37.500 0.00 0.00 35.63 3.02
579 1465 6.219473 TCTTACTTTCTGTTGAGAGCAAGAG 58.781 40.000 0.00 0.00 44.38 2.85
580 1466 3.137533 ACTTTCTGTTGAGAGCAAGAGC 58.862 45.455 0.00 0.00 43.14 4.09
581 1467 2.916702 TTCTGTTGAGAGCAAGAGCA 57.083 45.000 0.00 0.00 43.14 4.26
582 1468 2.452295 TCTGTTGAGAGCAAGAGCAG 57.548 50.000 0.00 0.00 43.14 4.24
583 1469 1.001746 TCTGTTGAGAGCAAGAGCAGG 59.998 52.381 0.00 0.00 43.14 4.85
584 1470 1.001746 CTGTTGAGAGCAAGAGCAGGA 59.998 52.381 0.00 0.00 45.49 3.86
585 1471 1.001746 TGTTGAGAGCAAGAGCAGGAG 59.998 52.381 0.00 0.00 45.49 3.69
586 1472 0.036577 TTGAGAGCAAGAGCAGGAGC 60.037 55.000 0.00 0.00 45.49 4.70
587 1473 1.190178 TGAGAGCAAGAGCAGGAGCA 61.190 55.000 0.00 0.00 45.49 4.26
588 1474 0.036577 GAGAGCAAGAGCAGGAGCAA 60.037 55.000 0.00 0.00 45.49 3.91
589 1475 0.036199 AGAGCAAGAGCAGGAGCAAG 60.036 55.000 0.00 0.00 45.49 4.01
590 1476 0.036577 GAGCAAGAGCAGGAGCAAGA 60.037 55.000 0.00 0.00 45.49 3.02
591 1477 0.036199 AGCAAGAGCAGGAGCAAGAG 60.036 55.000 0.00 0.00 45.49 2.85
592 1478 1.646624 GCAAGAGCAGGAGCAAGAGC 61.647 60.000 0.00 0.00 45.49 4.09
593 1479 0.321387 CAAGAGCAGGAGCAAGAGCA 60.321 55.000 0.00 0.00 45.49 4.26
594 1480 0.399454 AAGAGCAGGAGCAAGAGCAA 59.601 50.000 0.00 0.00 45.49 3.91
595 1481 0.619505 AGAGCAGGAGCAAGAGCAAT 59.380 50.000 0.00 0.00 45.49 3.56
596 1482 1.836166 AGAGCAGGAGCAAGAGCAATA 59.164 47.619 0.00 0.00 45.49 1.90
597 1483 2.158928 AGAGCAGGAGCAAGAGCAATAG 60.159 50.000 0.00 0.00 45.49 1.73
598 1484 0.662085 GCAGGAGCAAGAGCAATAGC 59.338 55.000 0.00 0.00 45.49 2.97
599 1485 2.015588 GCAGGAGCAAGAGCAATAGCA 61.016 52.381 0.00 0.00 45.49 3.49
603 1489 2.479219 GGAGCAAGAGCAATAGCAAAGC 60.479 50.000 0.00 0.00 45.49 3.51
611 1497 1.063174 GCAATAGCAAAGCGGAGACTG 59.937 52.381 0.00 0.00 41.58 3.51
623 1509 2.819115 CGGAGACTGGATCATCACAAG 58.181 52.381 0.00 0.00 0.00 3.16
627 1513 3.176411 AGACTGGATCATCACAAGGACA 58.824 45.455 0.00 0.00 0.00 4.02
636 1528 0.994247 TCACAAGGACATGAGCCCAT 59.006 50.000 0.00 0.00 0.00 4.00
654 1546 0.981183 ATCCAAAGCCGTGACCAGTA 59.019 50.000 0.00 0.00 0.00 2.74
655 1547 0.320374 TCCAAAGCCGTGACCAGTAG 59.680 55.000 0.00 0.00 0.00 2.57
656 1548 1.298859 CCAAAGCCGTGACCAGTAGC 61.299 60.000 0.00 0.00 0.00 3.58
684 1576 1.173913 GCTCCATTAACACCCACACC 58.826 55.000 0.00 0.00 0.00 4.16
700 1597 2.673368 CACACCCGCAGAGAAATAAGAC 59.327 50.000 0.00 0.00 0.00 3.01
702 1599 2.673368 CACCCGCAGAGAAATAAGACAC 59.327 50.000 0.00 0.00 0.00 3.67
703 1600 2.280628 CCCGCAGAGAAATAAGACACC 58.719 52.381 0.00 0.00 0.00 4.16
704 1601 2.354704 CCCGCAGAGAAATAAGACACCA 60.355 50.000 0.00 0.00 0.00 4.17
705 1602 2.673368 CCGCAGAGAAATAAGACACCAC 59.327 50.000 0.00 0.00 0.00 4.16
706 1603 2.673368 CGCAGAGAAATAAGACACCACC 59.327 50.000 0.00 0.00 0.00 4.61
707 1604 2.673368 GCAGAGAAATAAGACACCACCG 59.327 50.000 0.00 0.00 0.00 4.94
708 1605 3.262420 CAGAGAAATAAGACACCACCGG 58.738 50.000 0.00 0.00 0.00 5.28
709 1606 2.007608 GAGAAATAAGACACCACCGGC 58.992 52.381 0.00 0.00 0.00 6.13
710 1607 1.628846 AGAAATAAGACACCACCGGCT 59.371 47.619 0.00 0.00 0.00 5.52
712 1609 0.108329 AATAAGACACCACCGGCTCG 60.108 55.000 0.00 0.00 0.00 5.03
842 1790 1.198637 CCGCTTCCTTGCTTCTTCAAG 59.801 52.381 0.00 0.00 42.23 3.02
934 1929 0.810648 GCAAGCATCGGATCAAACCA 59.189 50.000 0.00 0.00 0.00 3.67
989 2070 2.317609 CCGCGGTTGGAAGACACAG 61.318 63.158 19.50 0.00 0.00 3.66
993 2074 1.338200 GCGGTTGGAAGACACAGAGAT 60.338 52.381 0.00 0.00 0.00 2.75
998 2079 4.416620 GTTGGAAGACACAGAGATAGACG 58.583 47.826 0.00 0.00 0.00 4.18
1026 2107 2.517166 GGCGGGAAGATGAAGGGC 60.517 66.667 0.00 0.00 0.00 5.19
1027 2108 2.897350 GCGGGAAGATGAAGGGCG 60.897 66.667 0.00 0.00 0.00 6.13
1028 2109 2.203070 CGGGAAGATGAAGGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
1207 2288 4.974721 CCCAGCACCACCACCACC 62.975 72.222 0.00 0.00 0.00 4.61
1299 2380 3.110178 GTCCAGGTACGCACGCAC 61.110 66.667 0.00 0.00 0.00 5.34
1302 2383 2.569657 CAGGTACGCACGCACCTA 59.430 61.111 14.33 0.00 43.45 3.08
1303 2384 1.804326 CAGGTACGCACGCACCTAC 60.804 63.158 14.33 0.00 43.45 3.18
1304 2385 2.507769 GGTACGCACGCACCTACC 60.508 66.667 5.18 0.00 0.00 3.18
1306 2387 1.153706 GTACGCACGCACCTACCAT 60.154 57.895 0.00 0.00 0.00 3.55
1307 2388 1.153726 TACGCACGCACCTACCATG 60.154 57.895 0.00 0.00 0.00 3.66
1308 2389 1.596895 TACGCACGCACCTACCATGA 61.597 55.000 0.00 0.00 0.00 3.07
1309 2390 2.452813 CGCACGCACCTACCATGAC 61.453 63.158 0.00 0.00 0.00 3.06
1310 2391 1.375396 GCACGCACCTACCATGACA 60.375 57.895 0.00 0.00 0.00 3.58
1311 2392 0.953471 GCACGCACCTACCATGACAA 60.953 55.000 0.00 0.00 0.00 3.18
1314 2395 2.487762 CACGCACCTACCATGACAATTT 59.512 45.455 0.00 0.00 0.00 1.82
1315 2396 3.687212 CACGCACCTACCATGACAATTTA 59.313 43.478 0.00 0.00 0.00 1.40
1316 2397 4.155099 CACGCACCTACCATGACAATTTAA 59.845 41.667 0.00 0.00 0.00 1.52
1318 2399 5.417580 ACGCACCTACCATGACAATTTAATT 59.582 36.000 0.00 0.00 0.00 1.40
1319 2400 6.071616 ACGCACCTACCATGACAATTTAATTT 60.072 34.615 0.00 0.00 0.00 1.82
1320 2401 6.253298 CGCACCTACCATGACAATTTAATTTG 59.747 38.462 8.24 8.24 0.00 2.32
1341 2424 3.244976 GTTGATTTTTCTCGCACCCATG 58.755 45.455 0.00 0.00 0.00 3.66
1360 2443 6.710744 ACCCATGCAACTAGTATTACTATTGC 59.289 38.462 25.04 25.04 40.89 3.56
1361 2444 6.936900 CCCATGCAACTAGTATTACTATTGCT 59.063 38.462 27.90 19.72 40.98 3.91
1362 2445 7.095060 CCCATGCAACTAGTATTACTATTGCTG 60.095 40.741 27.90 24.34 40.98 4.41
1363 2446 7.442364 CCATGCAACTAGTATTACTATTGCTGT 59.558 37.037 27.90 21.13 40.98 4.40
1364 2447 8.830580 CATGCAACTAGTATTACTATTGCTGTT 58.169 33.333 27.90 17.58 40.98 3.16
1365 2448 8.196802 TGCAACTAGTATTACTATTGCTGTTG 57.803 34.615 27.90 23.91 40.98 3.33
1366 2449 7.279981 TGCAACTAGTATTACTATTGCTGTTGG 59.720 37.037 27.90 15.87 40.98 3.77
1386 2473 0.512952 GTTTGAGCGTCGTTCTGCAT 59.487 50.000 10.54 0.00 0.00 3.96
1430 2519 7.426410 TCAATTCAGACTGTATTACGAGGATC 58.574 38.462 6.96 0.00 0.00 3.36
1432 2521 5.752892 TCAGACTGTATTACGAGGATCAC 57.247 43.478 1.59 0.00 33.17 3.06
1448 2553 4.896482 AGGATCACCACTGTAGATACTTCC 59.104 45.833 0.00 0.00 38.94 3.46
1519 2624 5.288712 CGTTGGTCAAATGCACTAGTAGTAG 59.711 44.000 1.57 2.87 0.00 2.57
1521 2626 4.466370 TGGTCAAATGCACTAGTAGTAGCT 59.534 41.667 18.99 0.00 0.00 3.32
1522 2627 5.046591 TGGTCAAATGCACTAGTAGTAGCTT 60.047 40.000 18.99 13.16 0.00 3.74
1523 2628 6.153851 TGGTCAAATGCACTAGTAGTAGCTTA 59.846 38.462 18.99 6.71 0.00 3.09
1524 2629 6.697892 GGTCAAATGCACTAGTAGTAGCTTAG 59.302 42.308 18.99 12.24 0.00 2.18
1525 2630 6.199342 GTCAAATGCACTAGTAGTAGCTTAGC 59.801 42.308 18.99 11.69 0.00 3.09
1542 2647 6.463360 AGCTTAGCTAGGCTCAAGATATTTC 58.537 40.000 23.58 0.00 40.44 2.17
1549 2654 6.294397 GCTAGGCTCAAGATATTTCCCATTTG 60.294 42.308 0.00 0.00 0.00 2.32
1556 2661 5.329035 AGATATTTCCCATTTGCACACAC 57.671 39.130 0.00 0.00 0.00 3.82
1568 2673 1.202758 TGCACACACGATTTTCCTCCT 60.203 47.619 0.00 0.00 0.00 3.69
1590 2699 8.755696 TCCTCCAATCAATTATTTTGTTTTCG 57.244 30.769 0.00 0.00 0.00 3.46
1600 2709 8.608886 CAATTATTTTGTTTTCGTCAAATTGCG 58.391 29.630 4.01 4.01 35.25 4.85
1602 2711 4.746836 TTTGTTTTCGTCAAATTGCGAC 57.253 36.364 10.88 0.00 36.82 5.19
1823 2937 1.476891 GGCCTGTGTTGATCGAGTCTA 59.523 52.381 0.00 0.00 0.00 2.59
1824 2938 2.480416 GGCCTGTGTTGATCGAGTCTAG 60.480 54.545 0.00 0.00 0.00 2.43
1827 2944 4.496673 GCCTGTGTTGATCGAGTCTAGTAG 60.497 50.000 0.00 0.00 0.00 2.57
1870 2996 1.797933 CGAAGACCAGCTCACGTCG 60.798 63.158 0.00 0.00 34.10 5.12
1871 2997 1.444553 GAAGACCAGCTCACGTCGG 60.445 63.158 0.00 0.00 34.10 4.79
1872 2998 2.143594 GAAGACCAGCTCACGTCGGT 62.144 60.000 0.00 0.00 34.10 4.69
1873 2999 2.126424 GACCAGCTCACGTCGGTC 60.126 66.667 3.15 3.15 41.08 4.79
1874 3000 2.597805 ACCAGCTCACGTCGGTCT 60.598 61.111 0.00 0.00 0.00 3.85
1875 3001 2.179517 CCAGCTCACGTCGGTCTC 59.820 66.667 0.00 0.00 0.00 3.36
1876 3002 2.202362 CAGCTCACGTCGGTCTCG 60.202 66.667 0.00 0.00 37.82 4.04
1877 3003 2.358369 AGCTCACGTCGGTCTCGA 60.358 61.111 0.00 0.00 43.86 4.04
1883 3009 2.812609 CGTCGGTCTCGAGGTCGA 60.813 66.667 20.95 20.95 46.91 4.20
1885 3011 2.812609 TCGGTCTCGAGGTCGACG 60.813 66.667 20.95 14.63 44.22 5.12
1886 3012 3.862402 CGGTCTCGAGGTCGACGG 61.862 72.222 13.56 4.19 44.22 4.79
1887 3013 4.176851 GGTCTCGAGGTCGACGGC 62.177 72.222 13.56 2.70 44.22 5.68
1888 3014 4.517703 GTCTCGAGGTCGACGGCG 62.518 72.222 18.79 18.79 44.22 6.46
1963 3089 2.671963 AACCGCCCGCTCCTTTTC 60.672 61.111 0.00 0.00 0.00 2.29
1968 3094 1.524008 CGCCCGCTCCTTTTCCTTTT 61.524 55.000 0.00 0.00 0.00 2.27
2006 3132 9.793259 CCCCATGTCTATGTATGTATTTTTAGT 57.207 33.333 0.00 0.00 32.21 2.24
2087 3224 2.621407 GCTTCTCCCCATGATGGACAAA 60.621 50.000 14.26 0.99 40.96 2.83
2115 3281 5.493133 AAAGCTTGTTACACGATGACAAA 57.507 34.783 0.00 0.00 36.45 2.83
2117 3283 3.498397 AGCTTGTTACACGATGACAAAGG 59.502 43.478 0.00 0.00 36.45 3.11
2120 3286 3.064207 TGTTACACGATGACAAAGGAGC 58.936 45.455 0.00 0.00 0.00 4.70
2158 3324 0.931662 CTGTGCACGTTGCTGCTTTC 60.932 55.000 13.13 0.00 45.31 2.62
2170 3336 2.747855 GCTTTCAGCACTCCCGGG 60.748 66.667 16.85 16.85 41.89 5.73
2172 3338 1.374947 CTTTCAGCACTCCCGGGAA 59.625 57.895 26.68 5.18 0.00 3.97
2173 3339 0.674895 CTTTCAGCACTCCCGGGAAG 60.675 60.000 26.68 20.87 0.00 3.46
2174 3340 1.125093 TTTCAGCACTCCCGGGAAGA 61.125 55.000 26.68 14.30 0.00 2.87
2175 3341 1.827399 TTCAGCACTCCCGGGAAGAC 61.827 60.000 26.68 16.22 0.00 3.01
2176 3342 2.203788 AGCACTCCCGGGAAGACA 60.204 61.111 26.68 0.53 0.00 3.41
2177 3343 1.613630 AGCACTCCCGGGAAGACAT 60.614 57.895 26.68 6.87 0.00 3.06
2184 3357 5.621193 CACTCCCGGGAAGACATAATTATT 58.379 41.667 26.68 0.00 0.00 1.40
2186 3359 5.607171 ACTCCCGGGAAGACATAATTATTCT 59.393 40.000 26.68 0.47 0.00 2.40
2287 3461 1.893801 ACGGCTAGTAGTTCTGTTGCT 59.106 47.619 0.00 0.00 0.00 3.91
2289 3463 2.094700 CGGCTAGTAGTTCTGTTGCTGA 60.095 50.000 0.00 0.00 31.48 4.26
2291 3465 3.193691 GGCTAGTAGTTCTGTTGCTGAGA 59.806 47.826 0.00 0.00 0.00 3.27
2314 3488 4.394712 CGGACGGCCCTTCTTGCT 62.395 66.667 0.00 0.00 0.00 3.91
2316 3490 3.435186 GACGGCCCTTCTTGCTGC 61.435 66.667 0.00 0.00 38.71 5.25
2317 3491 4.269523 ACGGCCCTTCTTGCTGCA 62.270 61.111 0.00 0.00 38.71 4.41
2318 3492 3.437795 CGGCCCTTCTTGCTGCAG 61.438 66.667 10.11 10.11 0.00 4.41
2319 3493 3.066814 GGCCCTTCTTGCTGCAGG 61.067 66.667 17.12 5.27 0.00 4.85
2322 3496 1.975407 CCCTTCTTGCTGCAGGGTG 60.975 63.158 17.12 7.11 43.17 4.61
2324 3498 1.975407 CTTCTTGCTGCAGGGTGGG 60.975 63.158 17.12 0.00 0.00 4.61
2326 3500 3.970410 CTTGCTGCAGGGTGGGGA 61.970 66.667 17.12 0.00 0.00 4.81
2327 3501 4.284550 TTGCTGCAGGGTGGGGAC 62.285 66.667 17.12 0.00 0.00 4.46
2341 3515 4.382320 GGACCACCCGCGCTTACA 62.382 66.667 5.56 0.00 0.00 2.41
2342 3516 3.116531 GACCACCCGCGCTTACAC 61.117 66.667 5.56 0.00 0.00 2.90
2343 3517 4.692475 ACCACCCGCGCTTACACC 62.692 66.667 5.56 0.00 0.00 4.16
2344 3518 4.388499 CCACCCGCGCTTACACCT 62.388 66.667 5.56 0.00 0.00 4.00
2345 3519 2.813908 CACCCGCGCTTACACCTC 60.814 66.667 5.56 0.00 0.00 3.85
2346 3520 4.430765 ACCCGCGCTTACACCTCG 62.431 66.667 5.56 0.00 0.00 4.63
2351 3525 3.463505 CGCTTACACCTCGCAGTG 58.536 61.111 3.43 3.43 43.65 3.66
2358 3532 2.238353 CACCTCGCAGTGTTCTTGG 58.762 57.895 0.00 0.00 32.89 3.61
2359 3533 0.249868 CACCTCGCAGTGTTCTTGGA 60.250 55.000 0.00 0.00 32.89 3.53
2360 3534 0.034059 ACCTCGCAGTGTTCTTGGAG 59.966 55.000 0.00 0.00 0.00 3.86
2361 3535 0.034059 CCTCGCAGTGTTCTTGGAGT 59.966 55.000 0.00 0.00 0.00 3.85
2362 3536 1.272490 CCTCGCAGTGTTCTTGGAGTA 59.728 52.381 0.00 0.00 0.00 2.59
2363 3537 2.600731 CTCGCAGTGTTCTTGGAGTAG 58.399 52.381 0.00 0.00 0.00 2.57
2364 3538 1.961394 TCGCAGTGTTCTTGGAGTAGT 59.039 47.619 0.00 0.00 0.00 2.73
2365 3539 3.151554 TCGCAGTGTTCTTGGAGTAGTA 58.848 45.455 0.00 0.00 0.00 1.82
2366 3540 3.057736 TCGCAGTGTTCTTGGAGTAGTAC 60.058 47.826 0.00 0.00 0.00 2.73
2367 3541 3.305131 CGCAGTGTTCTTGGAGTAGTACA 60.305 47.826 2.52 0.00 0.00 2.90
2388 3562 3.654143 AGGCACAGCAGCATGGGA 61.654 61.111 0.00 0.00 35.86 4.37
2396 3570 1.453379 GCAGCATGGGAGCATGTCT 60.453 57.895 0.00 0.00 35.86 3.41
2397 3571 1.445716 GCAGCATGGGAGCATGTCTC 61.446 60.000 8.20 8.20 37.61 3.36
2398 3572 0.180642 CAGCATGGGAGCATGTCTCT 59.819 55.000 14.20 0.00 41.60 3.10
2461 3635 1.174712 ACAGGCTTGCATGTGACCAC 61.175 55.000 12.13 0.00 0.00 4.16
2537 3711 5.741388 ACTGTTTTTGAGAACTACAGCAG 57.259 39.130 0.00 0.00 39.77 4.24
2544 3718 7.801716 TTTTGAGAACTACAGCAGTACAAAT 57.198 32.000 0.00 0.00 36.04 2.32
2648 3825 4.526970 CATAAATGCTCACAACTCTCCG 57.473 45.455 0.00 0.00 0.00 4.63
2652 3830 1.040646 TGCTCACAACTCTCCGAACT 58.959 50.000 0.00 0.00 0.00 3.01
2653 3831 1.412710 TGCTCACAACTCTCCGAACTT 59.587 47.619 0.00 0.00 0.00 2.66
2654 3832 2.626266 TGCTCACAACTCTCCGAACTTA 59.374 45.455 0.00 0.00 0.00 2.24
2655 3833 3.069016 TGCTCACAACTCTCCGAACTTAA 59.931 43.478 0.00 0.00 0.00 1.85
2656 3834 4.246458 GCTCACAACTCTCCGAACTTAAT 58.754 43.478 0.00 0.00 0.00 1.40
2657 3835 4.691216 GCTCACAACTCTCCGAACTTAATT 59.309 41.667 0.00 0.00 0.00 1.40
2661 3839 5.701290 CACAACTCTCCGAACTTAATTTCCT 59.299 40.000 0.42 0.00 0.00 3.36
2666 3846 5.243207 TCTCCGAACTTAATTTCCTTGTCC 58.757 41.667 0.42 0.00 0.00 4.02
2676 3856 4.837093 ATTTCCTTGTCCCTTACGATCA 57.163 40.909 0.00 0.00 0.00 2.92
2679 3859 4.137116 TCCTTGTCCCTTACGATCAATG 57.863 45.455 0.00 0.00 0.00 2.82
2680 3860 3.517901 TCCTTGTCCCTTACGATCAATGT 59.482 43.478 0.00 0.00 0.00 2.71
2681 3861 4.019681 TCCTTGTCCCTTACGATCAATGTT 60.020 41.667 0.00 0.00 0.00 2.71
2682 3862 4.094887 CCTTGTCCCTTACGATCAATGTTG 59.905 45.833 0.00 0.00 0.00 3.33
2684 3864 3.262151 TGTCCCTTACGATCAATGTTGGA 59.738 43.478 0.00 0.00 0.00 3.53
2688 3868 3.930229 CCTTACGATCAATGTTGGACGAA 59.070 43.478 14.95 7.61 33.87 3.85
2689 3869 4.201685 CCTTACGATCAATGTTGGACGAAC 60.202 45.833 14.95 0.00 33.87 3.95
2939 4130 0.037232 ACCCGCACTGCTACTTTCTC 60.037 55.000 0.00 0.00 0.00 2.87
3118 4315 6.389830 ACAACTTCATGCATGTTACTTTCA 57.610 33.333 25.43 1.24 0.00 2.69
3125 4322 7.784633 TCATGCATGTTACTTTCAATCGATA 57.215 32.000 25.43 0.00 0.00 2.92
3126 4323 8.207521 TCATGCATGTTACTTTCAATCGATAA 57.792 30.769 25.43 0.00 0.00 1.75
3137 4334 8.827177 ACTTTCAATCGATAACAGTTAGTTGA 57.173 30.769 0.00 4.63 41.50 3.18
3155 4352 5.793817 AGTTGAGATGTACATACAGTTGCA 58.206 37.500 8.71 0.00 39.92 4.08
3159 4356 5.639082 TGAGATGTACATACAGTTGCAACAG 59.361 40.000 30.11 24.70 39.92 3.16
3195 4392 2.211806 TGGTTACGTGTTAGTTGGTGC 58.788 47.619 0.00 0.00 0.00 5.01
3218 4415 2.100631 CACGTTGGATCGGTGGCTC 61.101 63.158 0.00 0.00 34.94 4.70
3219 4416 2.511600 CGTTGGATCGGTGGCTCC 60.512 66.667 0.00 0.00 0.00 4.70
3314 4512 4.530710 ACTGCTTATCGTGTGGACTTTA 57.469 40.909 0.00 0.00 0.00 1.85
3321 4519 6.348213 GCTTATCGTGTGGACTTTAACAATGT 60.348 38.462 0.00 0.00 0.00 2.71
3327 4525 6.512578 CGTGTGGACTTTAACAATGTTGATCA 60.513 38.462 9.15 0.00 0.00 2.92
3378 4576 0.945743 TCTGCCGCATATGCATCGAC 60.946 55.000 26.52 11.20 42.21 4.20
3395 4630 0.598065 GACCATGTGGAACTTGTGGC 59.402 55.000 5.96 0.00 40.09 5.01
3403 4638 1.239347 GGAACTTGTGGCTTGTCTCC 58.761 55.000 0.00 0.00 0.00 3.71
3433 4681 7.095607 GGCCGACTGAAACATTTATGAGTATAG 60.096 40.741 0.00 0.00 0.00 1.31
3435 4683 9.314321 CCGACTGAAACATTTATGAGTATAGTT 57.686 33.333 0.00 0.00 0.00 2.24
3485 4735 2.030274 ACTAATGTTCAAAACGCTGGCC 60.030 45.455 0.00 0.00 0.00 5.36
3578 4828 1.811266 CAGCGACGTCTTCATGGGG 60.811 63.158 14.70 0.00 0.00 4.96
3956 5206 0.954452 GCAAGTTCCAGTGGAAGGTG 59.046 55.000 25.22 23.58 42.88 4.00
4027 5295 6.148264 CCATTCTTTCTGTTCTTCTTGCTTC 58.852 40.000 0.00 0.00 0.00 3.86
4028 5296 5.409643 TTCTTTCTGTTCTTCTTGCTTCG 57.590 39.130 0.00 0.00 0.00 3.79
4029 5297 3.248602 TCTTTCTGTTCTTCTTGCTTCGC 59.751 43.478 0.00 0.00 0.00 4.70
4030 5298 1.512926 TCTGTTCTTCTTGCTTCGCC 58.487 50.000 0.00 0.00 0.00 5.54
4031 5299 1.070758 TCTGTTCTTCTTGCTTCGCCT 59.929 47.619 0.00 0.00 0.00 5.52
4071 5344 1.004891 GGGAGGGGATTGAGAGGGT 59.995 63.158 0.00 0.00 0.00 4.34
4129 5402 9.935241 TCATTTCAGCTAGATGATTATTACTCC 57.065 33.333 12.21 0.00 0.00 3.85
4130 5403 9.160496 CATTTCAGCTAGATGATTATTACTCCC 57.840 37.037 12.21 0.00 0.00 4.30
4131 5404 8.497910 TTTCAGCTAGATGATTATTACTCCCT 57.502 34.615 12.21 0.00 0.00 4.20
4132 5405 7.710676 TCAGCTAGATGATTATTACTCCCTC 57.289 40.000 6.59 0.00 0.00 4.30
4133 5406 7.474445 TCAGCTAGATGATTATTACTCCCTCT 58.526 38.462 6.59 0.00 0.00 3.69
4134 5407 7.395772 TCAGCTAGATGATTATTACTCCCTCTG 59.604 40.741 6.59 0.00 0.00 3.35
4135 5408 7.178274 CAGCTAGATGATTATTACTCCCTCTGT 59.822 40.741 0.40 0.00 0.00 3.41
4136 5409 8.394822 AGCTAGATGATTATTACTCCCTCTGTA 58.605 37.037 0.00 0.00 0.00 2.74
4137 5410 9.026121 GCTAGATGATTATTACTCCCTCTGTAA 57.974 37.037 0.00 0.00 34.87 2.41
4140 5413 9.440761 AGATGATTATTACTCCCTCTGTAAACT 57.559 33.333 0.00 0.00 34.20 2.66
4151 5424 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
4152 5425 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
4153 5426 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
4154 5427 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
4155 5428 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
4164 5437 9.900710 ACTAATATAAGAGCGTTTAGATCACTG 57.099 33.333 0.00 0.00 37.82 3.66
4167 5440 9.469807 AATATAAGAGCGTTTAGATCACTGAAG 57.530 33.333 0.00 0.00 37.82 3.02
4168 5441 4.792521 AGAGCGTTTAGATCACTGAAGT 57.207 40.909 0.00 0.00 37.82 3.01
4169 5442 5.899120 AGAGCGTTTAGATCACTGAAGTA 57.101 39.130 0.00 0.00 37.82 2.24
4170 5443 5.885881 AGAGCGTTTAGATCACTGAAGTAG 58.114 41.667 0.00 0.00 37.82 2.57
4171 5444 5.416326 AGAGCGTTTAGATCACTGAAGTAGT 59.584 40.000 0.00 0.00 41.36 2.73
4184 5457 6.707599 ACTGAAGTAGTGATTTAAACGCTC 57.292 37.500 7.00 0.00 38.49 5.03
4185 5458 6.456501 ACTGAAGTAGTGATTTAAACGCTCT 58.543 36.000 7.00 4.27 38.49 4.09
4186 5459 6.929606 ACTGAAGTAGTGATTTAAACGCTCTT 59.070 34.615 7.00 9.51 38.49 2.85
4187 5460 8.086522 ACTGAAGTAGTGATTTAAACGCTCTTA 58.913 33.333 7.00 0.00 38.49 2.10
4188 5461 8.997621 TGAAGTAGTGATTTAAACGCTCTTAT 57.002 30.769 7.00 0.00 0.00 1.73
4202 5475 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
4203 5476 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
4204 5477 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
4205 5478 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
4206 5479 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
4253 5528 5.924254 TGTACACAAACATACACAGAGTAGC 59.076 40.000 0.00 0.00 35.85 3.58
4362 5637 2.359900 AGCAGTAGCCTGTTTATGCAC 58.640 47.619 0.00 0.00 43.56 4.57
4384 5659 5.289193 CACCACAAGTGTTGTTTTCTTGATG 59.711 40.000 10.41 5.78 43.23 3.07
4385 5660 5.184864 ACCACAAGTGTTGTTTTCTTGATGA 59.815 36.000 10.41 0.00 43.23 2.92
4387 5662 7.068103 ACCACAAGTGTTGTTTTCTTGATGATA 59.932 33.333 10.41 0.00 43.23 2.15
4388 5663 7.379529 CCACAAGTGTTGTTTTCTTGATGATAC 59.620 37.037 10.41 0.00 43.23 2.24
4389 5664 7.112009 CACAAGTGTTGTTTTCTTGATGATACG 59.888 37.037 10.41 0.00 43.23 3.06
4392 5667 7.793902 AGTGTTGTTTTCTTGATGATACGTAC 58.206 34.615 0.00 0.00 0.00 3.67
4433 5770 8.560374 AGCAGAAACACAGATTAAACTAACTTC 58.440 33.333 0.00 0.00 0.00 3.01
4611 5965 7.174426 CCATGACATAATCATCACATAAGCACT 59.826 37.037 0.00 0.00 45.52 4.40
4630 5984 3.006323 CACTGGGCTGTATATCTCCACTC 59.994 52.174 0.00 0.00 0.00 3.51
4631 5985 2.230025 CTGGGCTGTATATCTCCACTCG 59.770 54.545 0.00 0.00 0.00 4.18
4650 6004 3.290710 TCGGTGATGAGATCAGACATCA 58.709 45.455 19.05 19.05 46.63 3.07
4657 6011 3.593096 TGAGATCAGACATCACTTGCAC 58.407 45.455 0.00 0.00 0.00 4.57
4695 6235 2.433970 GCATAGCTCAAGAACCCTCTCT 59.566 50.000 0.00 0.00 0.00 3.10
4699 6239 0.108424 CTCAAGAACCCTCTCTGCCG 60.108 60.000 0.00 0.00 0.00 5.69
4734 6274 5.242838 TCAATTTCAACACGCCTTTTATCCT 59.757 36.000 0.00 0.00 0.00 3.24
4758 6298 3.530265 ACGATGGCTTACGGATGTTAA 57.470 42.857 0.00 0.00 0.00 2.01
4814 6354 3.998913 TTTACAGCCCATCTCACATCA 57.001 42.857 0.00 0.00 0.00 3.07
4948 6489 5.278957 GCAAGTTGGATGGAAATTGTACACT 60.279 40.000 4.75 0.00 34.24 3.55
4949 6490 5.964958 AGTTGGATGGAAATTGTACACTG 57.035 39.130 0.00 0.00 0.00 3.66
4950 6491 5.385198 AGTTGGATGGAAATTGTACACTGT 58.615 37.500 0.00 0.00 0.00 3.55
4951 6492 6.539173 AGTTGGATGGAAATTGTACACTGTA 58.461 36.000 0.00 0.00 0.00 2.74
4952 6493 7.001674 AGTTGGATGGAAATTGTACACTGTAA 58.998 34.615 0.00 0.00 0.00 2.41
4953 6494 7.669722 AGTTGGATGGAAATTGTACACTGTAAT 59.330 33.333 0.00 0.00 0.00 1.89
4954 6495 8.303876 GTTGGATGGAAATTGTACACTGTAATT 58.696 33.333 0.00 0.00 0.00 1.40
4955 6496 8.415950 TGGATGGAAATTGTACACTGTAATTT 57.584 30.769 0.00 0.00 36.89 1.82
4956 6497 8.519526 TGGATGGAAATTGTACACTGTAATTTC 58.480 33.333 16.51 16.51 44.25 2.17
4957 6498 8.519526 GGATGGAAATTGTACACTGTAATTTCA 58.480 33.333 22.32 13.66 45.62 2.69
4959 6500 9.859427 ATGGAAATTGTACACTGTAATTTCATG 57.141 29.630 22.32 0.00 45.62 3.07
4960 6501 8.855110 TGGAAATTGTACACTGTAATTTCATGT 58.145 29.630 22.32 0.00 45.62 3.21
4961 6502 9.341899 GGAAATTGTACACTGTAATTTCATGTC 57.658 33.333 22.32 8.93 45.62 3.06
4962 6503 9.341899 GAAATTGTACACTGTAATTTCATGTCC 57.658 33.333 18.59 0.00 44.32 4.02
4963 6504 6.811253 TTGTACACTGTAATTTCATGTCCC 57.189 37.500 0.00 0.47 0.00 4.46
4964 6505 5.870706 TGTACACTGTAATTTCATGTCCCA 58.129 37.500 0.00 2.24 0.00 4.37
4965 6506 6.299922 TGTACACTGTAATTTCATGTCCCAA 58.700 36.000 0.00 0.00 0.00 4.12
4966 6507 5.705609 ACACTGTAATTTCATGTCCCAAC 57.294 39.130 0.00 0.00 0.00 3.77
4967 6508 5.136828 ACACTGTAATTTCATGTCCCAACA 58.863 37.500 0.00 0.00 40.38 3.33
4968 6509 5.241506 ACACTGTAATTTCATGTCCCAACAG 59.758 40.000 14.38 14.38 39.20 3.16
4969 6510 5.241506 CACTGTAATTTCATGTCCCAACAGT 59.758 40.000 15.30 15.30 45.18 3.55
4970 6511 5.473504 ACTGTAATTTCATGTCCCAACAGTC 59.526 40.000 15.30 0.00 41.72 3.51
4971 6512 4.764823 TGTAATTTCATGTCCCAACAGTCC 59.235 41.667 0.00 0.00 39.20 3.85
4972 6513 3.524095 ATTTCATGTCCCAACAGTCCA 57.476 42.857 0.00 0.00 39.20 4.02
4973 6514 3.304911 TTTCATGTCCCAACAGTCCAA 57.695 42.857 0.00 0.00 39.20 3.53
4974 6515 2.270352 TCATGTCCCAACAGTCCAAC 57.730 50.000 0.00 0.00 39.20 3.77
4975 6516 1.774254 TCATGTCCCAACAGTCCAACT 59.226 47.619 0.00 0.00 39.20 3.16
4976 6517 2.174639 TCATGTCCCAACAGTCCAACTT 59.825 45.455 0.00 0.00 39.20 2.66
4977 6518 3.392947 TCATGTCCCAACAGTCCAACTTA 59.607 43.478 0.00 0.00 39.20 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 62 3.324930 TGGAGCTCCAGGCCAGTG 61.325 66.667 32.00 0.00 42.01 3.66
76 85 0.038166 ACCACCGACAGCCAATTCAT 59.962 50.000 0.00 0.00 0.00 2.57
77 86 0.687920 TACCACCGACAGCCAATTCA 59.312 50.000 0.00 0.00 0.00 2.57
79 88 0.398696 TGTACCACCGACAGCCAATT 59.601 50.000 0.00 0.00 0.00 2.32
84 102 0.250166 AAACCTGTACCACCGACAGC 60.250 55.000 0.00 0.00 42.52 4.40
85 103 2.140717 GAAAACCTGTACCACCGACAG 58.859 52.381 0.00 0.00 43.32 3.51
113 134 1.021968 GCTTTGATTAATCCGGCGGT 58.978 50.000 27.32 10.46 0.00 5.68
119 140 6.172630 ACATTGGTTTGGCTTTGATTAATCC 58.827 36.000 12.90 0.00 0.00 3.01
137 158 1.299541 CTAGTGCCGCCTAACATTGG 58.700 55.000 0.00 0.00 0.00 3.16
141 163 1.136305 CTAAGCTAGTGCCGCCTAACA 59.864 52.381 0.00 0.00 40.80 2.41
246 767 0.950836 TGCTGGTTGTCGTCAATTGG 59.049 50.000 5.42 0.00 35.92 3.16
255 776 1.785041 ATGTGTGCGTGCTGGTTGTC 61.785 55.000 0.00 0.00 0.00 3.18
256 777 1.785041 GATGTGTGCGTGCTGGTTGT 61.785 55.000 0.00 0.00 0.00 3.32
307 842 1.078918 CTGCTCTGTTCATGGGCGA 60.079 57.895 0.00 0.00 0.00 5.54
308 843 1.078918 TCTGCTCTGTTCATGGGCG 60.079 57.895 0.00 0.00 0.00 6.13
311 846 1.338864 ACTGCTCTGCTCTGTTCATGG 60.339 52.381 0.00 0.00 0.00 3.66
314 1154 1.139654 ACAACTGCTCTGCTCTGTTCA 59.860 47.619 0.00 0.00 0.00 3.18
317 1157 0.467384 ACACAACTGCTCTGCTCTGT 59.533 50.000 0.00 0.00 0.00 3.41
321 1161 0.107017 ACCAACACAACTGCTCTGCT 60.107 50.000 0.00 0.00 0.00 4.24
326 1166 1.608590 GTGCATACCAACACAACTGCT 59.391 47.619 0.00 0.00 36.77 4.24
346 1186 1.468520 CATACCGCTTCCCTTGTGTTG 59.531 52.381 0.00 0.00 0.00 3.33
351 1191 1.077787 TGCCATACCGCTTCCCTTG 60.078 57.895 0.00 0.00 0.00 3.61
354 1194 2.902343 GCTGCCATACCGCTTCCC 60.902 66.667 0.00 0.00 0.00 3.97
362 1202 2.438975 TGCTGCCTGCTGCCATAC 60.439 61.111 16.77 0.00 43.37 2.39
363 1203 2.124445 CTGCTGCCTGCTGCCATA 60.124 61.111 16.77 0.00 43.37 2.74
403 1274 4.899687 GCGGTCGCGACGATAGCA 62.900 66.667 30.99 0.00 39.48 3.49
457 1331 0.949105 TCGCTTTGAAAGTCTCCGCC 60.949 55.000 6.81 0.00 0.00 6.13
460 1334 1.740025 CCCATCGCTTTGAAAGTCTCC 59.260 52.381 6.81 0.00 0.00 3.71
461 1335 1.740025 CCCCATCGCTTTGAAAGTCTC 59.260 52.381 6.81 0.00 0.00 3.36
485 1359 1.227527 GCTTGTTGTTGGGTTGGCC 60.228 57.895 0.00 0.00 0.00 5.36
486 1360 1.227527 GGCTTGTTGTTGGGTTGGC 60.228 57.895 0.00 0.00 0.00 4.52
488 1362 1.206849 ACTTGGCTTGTTGTTGGGTTG 59.793 47.619 0.00 0.00 0.00 3.77
489 1363 1.567357 ACTTGGCTTGTTGTTGGGTT 58.433 45.000 0.00 0.00 0.00 4.11
490 1364 2.028876 GTACTTGGCTTGTTGTTGGGT 58.971 47.619 0.00 0.00 0.00 4.51
493 1377 2.687935 AGTGGTACTTGGCTTGTTGTTG 59.312 45.455 0.00 0.00 0.00 3.33
495 1380 2.729028 AGTGGTACTTGGCTTGTTGT 57.271 45.000 0.00 0.00 0.00 3.32
500 1385 3.138468 AGAAAGGAAGTGGTACTTGGCTT 59.862 43.478 0.00 0.00 38.80 4.35
542 1428 0.531200 AGTAAGAAAGTCTCCGCCCG 59.469 55.000 0.00 0.00 0.00 6.13
543 1429 2.764439 AAGTAAGAAAGTCTCCGCCC 57.236 50.000 0.00 0.00 0.00 6.13
544 1430 3.680458 CAGAAAGTAAGAAAGTCTCCGCC 59.320 47.826 0.00 0.00 0.00 6.13
546 1432 5.983720 TCAACAGAAAGTAAGAAAGTCTCCG 59.016 40.000 0.00 0.00 0.00 4.63
547 1433 7.210873 TCTCAACAGAAAGTAAGAAAGTCTCC 58.789 38.462 0.00 0.00 0.00 3.71
548 1434 7.095816 GCTCTCAACAGAAAGTAAGAAAGTCTC 60.096 40.741 0.00 0.00 0.00 3.36
549 1435 6.704050 GCTCTCAACAGAAAGTAAGAAAGTCT 59.296 38.462 0.00 0.00 0.00 3.24
550 1436 6.480320 TGCTCTCAACAGAAAGTAAGAAAGTC 59.520 38.462 0.00 0.00 0.00 3.01
551 1437 6.349300 TGCTCTCAACAGAAAGTAAGAAAGT 58.651 36.000 0.00 0.00 0.00 2.66
553 1439 7.047891 TCTTGCTCTCAACAGAAAGTAAGAAA 58.952 34.615 0.00 0.00 28.70 2.52
554 1440 6.582636 TCTTGCTCTCAACAGAAAGTAAGAA 58.417 36.000 0.00 0.00 28.70 2.52
555 1441 6.161855 TCTTGCTCTCAACAGAAAGTAAGA 57.838 37.500 0.00 0.00 28.95 2.10
556 1442 5.107143 GCTCTTGCTCTCAACAGAAAGTAAG 60.107 44.000 0.00 0.00 36.03 2.34
557 1443 4.752101 GCTCTTGCTCTCAACAGAAAGTAA 59.248 41.667 0.00 0.00 36.03 2.24
573 1459 1.646624 GCTCTTGCTCCTGCTCTTGC 61.647 60.000 0.00 0.00 40.48 4.01
576 1462 0.619505 ATTGCTCTTGCTCCTGCTCT 59.380 50.000 0.00 0.00 40.48 4.09
577 1463 2.211806 CTATTGCTCTTGCTCCTGCTC 58.788 52.381 0.00 0.00 40.48 4.26
578 1464 1.746516 GCTATTGCTCTTGCTCCTGCT 60.747 52.381 0.00 0.00 40.48 4.24
579 1465 0.662085 GCTATTGCTCTTGCTCCTGC 59.338 55.000 0.00 0.00 40.48 4.85
580 1466 2.034104 TGCTATTGCTCTTGCTCCTG 57.966 50.000 0.00 0.00 40.48 3.86
581 1467 2.795231 TTGCTATTGCTCTTGCTCCT 57.205 45.000 0.00 0.00 40.48 3.69
582 1468 2.479219 GCTTTGCTATTGCTCTTGCTCC 60.479 50.000 0.00 0.00 40.48 4.70
583 1469 2.790468 CGCTTTGCTATTGCTCTTGCTC 60.790 50.000 0.00 0.00 40.48 4.26
584 1470 1.131883 CGCTTTGCTATTGCTCTTGCT 59.868 47.619 0.00 0.00 40.48 3.91
585 1471 1.542544 CGCTTTGCTATTGCTCTTGC 58.457 50.000 0.00 0.00 40.48 4.01
586 1472 1.739466 TCCGCTTTGCTATTGCTCTTG 59.261 47.619 0.00 0.00 40.48 3.02
587 1473 2.012673 CTCCGCTTTGCTATTGCTCTT 58.987 47.619 0.00 0.00 40.48 2.85
588 1474 1.208052 TCTCCGCTTTGCTATTGCTCT 59.792 47.619 0.00 0.00 40.48 4.09
589 1475 1.328986 GTCTCCGCTTTGCTATTGCTC 59.671 52.381 0.00 0.00 40.48 4.26
590 1476 1.065854 AGTCTCCGCTTTGCTATTGCT 60.066 47.619 0.00 0.00 40.48 3.91
591 1477 1.063174 CAGTCTCCGCTTTGCTATTGC 59.937 52.381 0.00 0.00 40.20 3.56
592 1478 1.667724 CCAGTCTCCGCTTTGCTATTG 59.332 52.381 0.00 0.00 0.00 1.90
593 1479 1.555075 TCCAGTCTCCGCTTTGCTATT 59.445 47.619 0.00 0.00 0.00 1.73
594 1480 1.195115 TCCAGTCTCCGCTTTGCTAT 58.805 50.000 0.00 0.00 0.00 2.97
595 1481 1.137086 GATCCAGTCTCCGCTTTGCTA 59.863 52.381 0.00 0.00 0.00 3.49
596 1482 0.107945 GATCCAGTCTCCGCTTTGCT 60.108 55.000 0.00 0.00 0.00 3.91
597 1483 0.391661 TGATCCAGTCTCCGCTTTGC 60.392 55.000 0.00 0.00 0.00 3.68
598 1484 2.208431 GATGATCCAGTCTCCGCTTTG 58.792 52.381 0.00 0.00 0.00 2.77
599 1485 1.833630 TGATGATCCAGTCTCCGCTTT 59.166 47.619 0.00 0.00 0.00 3.51
603 1489 2.482664 CCTTGTGATGATCCAGTCTCCG 60.483 54.545 0.00 0.00 0.00 4.63
611 1497 2.877168 GCTCATGTCCTTGTGATGATCC 59.123 50.000 0.00 0.00 0.00 3.36
623 1509 1.396653 CTTTGGATGGGCTCATGTCC 58.603 55.000 2.16 0.07 38.74 4.02
627 1513 1.454479 CGGCTTTGGATGGGCTCAT 60.454 57.895 0.00 0.00 36.09 2.90
636 1528 0.320374 CTACTGGTCACGGCTTTGGA 59.680 55.000 0.00 0.00 0.00 3.53
654 1546 3.053693 TGTTAATGGAGCAGGTTATGGCT 60.054 43.478 0.00 0.00 44.48 4.75
655 1547 3.066760 GTGTTAATGGAGCAGGTTATGGC 59.933 47.826 0.00 0.00 0.00 4.40
656 1548 3.632145 GGTGTTAATGGAGCAGGTTATGG 59.368 47.826 0.00 0.00 0.00 2.74
684 1576 2.673368 GTGGTGTCTTATTTCTCTGCGG 59.327 50.000 0.00 0.00 0.00 5.69
706 1603 2.701163 GATTACCAGAGCCCGAGCCG 62.701 65.000 0.00 0.00 41.25 5.52
707 1604 1.069935 GATTACCAGAGCCCGAGCC 59.930 63.158 0.00 0.00 41.25 4.70
708 1605 0.249657 CTGATTACCAGAGCCCGAGC 60.250 60.000 0.00 0.00 45.78 5.03
709 1606 0.390860 CCTGATTACCAGAGCCCGAG 59.609 60.000 0.00 0.00 45.78 4.63
710 1607 1.686325 GCCTGATTACCAGAGCCCGA 61.686 60.000 0.00 0.00 45.78 5.14
712 1609 0.179034 CTGCCTGATTACCAGAGCCC 60.179 60.000 0.00 0.00 45.78 5.19
717 1623 0.543277 TGAGCCTGCCTGATTACCAG 59.457 55.000 0.00 0.00 42.55 4.00
801 1726 1.341089 GGGCTTTTAAGAGGGAGGTGG 60.341 57.143 0.00 0.00 0.00 4.61
803 1728 1.000496 GGGGCTTTTAAGAGGGAGGT 59.000 55.000 0.00 0.00 0.00 3.85
867 1815 3.901797 CTCTTGGGTGGCGGTGGAC 62.902 68.421 0.00 0.00 0.00 4.02
868 1816 3.636231 CTCTTGGGTGGCGGTGGA 61.636 66.667 0.00 0.00 0.00 4.02
874 1824 1.904032 CCTCTCTCTCTTGGGTGGC 59.096 63.158 0.00 0.00 0.00 5.01
934 1929 7.180051 CAGAGCCCTCCTGAAATAATACTAGAT 59.820 40.741 0.00 0.00 33.65 1.98
975 1971 4.675671 CGTCTATCTCTGTGTCTTCCAACC 60.676 50.000 0.00 0.00 0.00 3.77
980 1976 4.336993 ACATCCGTCTATCTCTGTGTCTTC 59.663 45.833 0.00 0.00 0.00 2.87
989 2070 1.344763 CCCCCAACATCCGTCTATCTC 59.655 57.143 0.00 0.00 0.00 2.75
1299 2380 9.874205 ATCAACAAATTAAATTGTCATGGTAGG 57.126 29.630 9.29 0.00 42.49 3.18
1308 2389 9.862585 GCGAGAAAAATCAACAAATTAAATTGT 57.137 25.926 2.97 2.97 45.12 2.71
1309 2390 9.861138 TGCGAGAAAAATCAACAAATTAAATTG 57.139 25.926 1.60 1.60 36.37 2.32
1310 2391 9.862585 GTGCGAGAAAAATCAACAAATTAAATT 57.137 25.926 0.00 0.00 0.00 1.82
1311 2392 8.495148 GGTGCGAGAAAAATCAACAAATTAAAT 58.505 29.630 0.00 0.00 0.00 1.40
1314 2395 5.923684 GGGTGCGAGAAAAATCAACAAATTA 59.076 36.000 0.00 0.00 0.00 1.40
1315 2396 4.749598 GGGTGCGAGAAAAATCAACAAATT 59.250 37.500 0.00 0.00 0.00 1.82
1316 2397 4.202202 TGGGTGCGAGAAAAATCAACAAAT 60.202 37.500 0.00 0.00 0.00 2.32
1318 2399 2.690497 TGGGTGCGAGAAAAATCAACAA 59.310 40.909 0.00 0.00 0.00 2.83
1319 2400 2.302260 TGGGTGCGAGAAAAATCAACA 58.698 42.857 0.00 0.00 0.00 3.33
1320 2401 3.244976 CATGGGTGCGAGAAAAATCAAC 58.755 45.455 0.00 0.00 0.00 3.18
1341 2424 7.254795 CCCAACAGCAATAGTAATACTAGTTGC 60.255 40.741 23.97 23.97 40.86 4.17
1342 2425 7.769044 ACCCAACAGCAATAGTAATACTAGTTG 59.231 37.037 16.27 16.27 33.66 3.16
1353 2436 2.558359 GCTCAAACCCAACAGCAATAGT 59.442 45.455 0.00 0.00 0.00 2.12
1356 2439 0.314935 CGCTCAAACCCAACAGCAAT 59.685 50.000 0.00 0.00 0.00 3.56
1360 2443 1.157870 ACGACGCTCAAACCCAACAG 61.158 55.000 0.00 0.00 0.00 3.16
1361 2444 0.745128 AACGACGCTCAAACCCAACA 60.745 50.000 0.00 0.00 0.00 3.33
1362 2445 0.041576 GAACGACGCTCAAACCCAAC 60.042 55.000 0.00 0.00 0.00 3.77
1363 2446 0.179067 AGAACGACGCTCAAACCCAA 60.179 50.000 0.52 0.00 0.00 4.12
1364 2447 0.878523 CAGAACGACGCTCAAACCCA 60.879 55.000 0.52 0.00 0.00 4.51
1365 2448 1.860078 CAGAACGACGCTCAAACCC 59.140 57.895 0.52 0.00 0.00 4.11
1366 2449 1.204312 GCAGAACGACGCTCAAACC 59.796 57.895 0.52 0.00 0.00 3.27
1411 2500 4.338400 TGGTGATCCTCGTAATACAGTCTG 59.662 45.833 0.00 0.00 34.23 3.51
1430 2519 2.434702 GGGGGAAGTATCTACAGTGGTG 59.565 54.545 0.00 0.00 0.00 4.17
1489 2594 1.671328 TGCATTTGACCAACGAAACGA 59.329 42.857 0.00 0.00 0.00 3.85
1490 2595 1.778591 GTGCATTTGACCAACGAAACG 59.221 47.619 0.00 0.00 0.00 3.60
1491 2596 3.078594 AGTGCATTTGACCAACGAAAC 57.921 42.857 0.00 0.00 0.00 2.78
1492 2597 3.880490 ACTAGTGCATTTGACCAACGAAA 59.120 39.130 0.00 0.00 0.00 3.46
1493 2598 3.472652 ACTAGTGCATTTGACCAACGAA 58.527 40.909 0.00 0.00 0.00 3.85
1519 2624 5.641636 GGAAATATCTTGAGCCTAGCTAAGC 59.358 44.000 6.19 6.19 39.88 3.09
1521 2626 5.606749 TGGGAAATATCTTGAGCCTAGCTAA 59.393 40.000 0.00 0.00 39.88 3.09
1522 2627 5.155161 TGGGAAATATCTTGAGCCTAGCTA 58.845 41.667 0.00 0.00 39.88 3.32
1523 2628 3.976654 TGGGAAATATCTTGAGCCTAGCT 59.023 43.478 0.00 0.00 43.88 3.32
1524 2629 4.357918 TGGGAAATATCTTGAGCCTAGC 57.642 45.455 0.00 0.00 0.00 3.42
1525 2630 6.294397 GCAAATGGGAAATATCTTGAGCCTAG 60.294 42.308 0.00 0.00 0.00 3.02
1542 2647 2.437200 AAATCGTGTGTGCAAATGGG 57.563 45.000 0.00 0.00 0.00 4.00
1549 2654 1.464997 GAGGAGGAAAATCGTGTGTGC 59.535 52.381 0.00 0.00 0.00 4.57
1556 2661 5.841957 AATTGATTGGAGGAGGAAAATCG 57.158 39.130 0.00 0.00 32.78 3.34
1568 2673 9.534565 TTGACGAAAACAAAATAATTGATTGGA 57.465 25.926 0.00 0.00 0.00 3.53
1590 2699 1.786579 GTGCCTTTGTCGCAATTTGAC 59.213 47.619 0.00 1.44 38.13 3.18
1598 2707 1.081840 GCTCTTGTGCCTTTGTCGC 60.082 57.895 0.00 0.00 0.00 5.19
1600 2709 1.678101 AGTTGCTCTTGTGCCTTTGTC 59.322 47.619 0.00 0.00 0.00 3.18
1602 2711 1.269413 CCAGTTGCTCTTGTGCCTTTG 60.269 52.381 0.00 0.00 0.00 2.77
1739 2853 5.019470 ACCCATTCAAAAAGAGGATTCTCC 58.981 41.667 0.00 0.00 40.83 3.71
1758 2872 4.980805 GTCGCCTCACGCAACCCA 62.981 66.667 0.00 0.00 43.23 4.51
1823 2937 2.105306 ACCACCGCTTTTGGTTACTACT 59.895 45.455 0.00 0.00 45.62 2.57
1824 2938 2.224784 CACCACCGCTTTTGGTTACTAC 59.775 50.000 0.00 0.00 45.62 2.73
1827 2944 0.312729 CCACCACCGCTTTTGGTTAC 59.687 55.000 0.00 0.00 45.62 2.50
1887 3013 2.566057 TACACACACATAGCCGCCCG 62.566 60.000 0.00 0.00 0.00 6.13
1888 3014 0.179056 ATACACACACATAGCCGCCC 60.179 55.000 0.00 0.00 0.00 6.13
1889 3015 0.937304 CATACACACACATAGCCGCC 59.063 55.000 0.00 0.00 0.00 6.13
1890 3016 1.327460 CACATACACACACATAGCCGC 59.673 52.381 0.00 0.00 0.00 6.53
1891 3017 1.933181 CCACATACACACACATAGCCG 59.067 52.381 0.00 0.00 0.00 5.52
1892 3018 2.936498 GTCCACATACACACACATAGCC 59.064 50.000 0.00 0.00 0.00 3.93
1893 3019 2.603110 CGTCCACATACACACACATAGC 59.397 50.000 0.00 0.00 0.00 2.97
1894 3020 3.845178 ACGTCCACATACACACACATAG 58.155 45.455 0.00 0.00 0.00 2.23
1895 3021 3.508402 AGACGTCCACATACACACACATA 59.492 43.478 13.01 0.00 0.00 2.29
1896 3022 2.299013 AGACGTCCACATACACACACAT 59.701 45.455 13.01 0.00 0.00 3.21
1897 3023 1.684450 AGACGTCCACATACACACACA 59.316 47.619 13.01 0.00 0.00 3.72
1898 3024 2.058798 CAGACGTCCACATACACACAC 58.941 52.381 13.01 0.00 0.00 3.82
1899 3025 1.604438 GCAGACGTCCACATACACACA 60.604 52.381 13.01 0.00 0.00 3.72
1900 3026 1.068474 GCAGACGTCCACATACACAC 58.932 55.000 13.01 0.00 0.00 3.82
1963 3089 2.042979 TGGGGAGGATGGAAAGAAAAGG 59.957 50.000 0.00 0.00 0.00 3.11
1968 3094 1.846439 GACATGGGGAGGATGGAAAGA 59.154 52.381 0.00 0.00 0.00 2.52
2011 3137 8.496916 TCTAATGACACCCAGTATACTGTAGTA 58.503 37.037 27.07 12.46 42.27 1.82
2012 3138 7.284944 GTCTAATGACACCCAGTATACTGTAGT 59.715 40.741 27.07 21.38 41.16 2.73
2016 3142 5.298527 TCGTCTAATGACACCCAGTATACTG 59.701 44.000 23.58 23.58 43.06 2.74
2018 3144 5.762825 TCGTCTAATGACACCCAGTATAC 57.237 43.478 0.00 0.00 43.06 1.47
2020 3146 4.142004 GGTTCGTCTAATGACACCCAGTAT 60.142 45.833 0.00 0.00 43.06 2.12
2023 3149 2.618053 GGTTCGTCTAATGACACCCAG 58.382 52.381 0.00 0.00 43.06 4.45
2025 3151 2.019948 GGGTTCGTCTAATGACACCC 57.980 55.000 8.36 8.36 45.84 4.61
2037 3163 2.028385 GTGGTGAGTCATTAGGGTTCGT 60.028 50.000 0.00 0.00 0.00 3.85
2087 3224 6.691388 GTCATCGTGTAACAAGCTTTTCTTTT 59.309 34.615 0.00 0.00 35.74 2.27
2158 3324 1.903877 ATGTCTTCCCGGGAGTGCTG 61.904 60.000 25.26 12.63 0.00 4.41
2170 3336 7.226325 ACAGCAGAGCAGAATAATTATGTCTTC 59.774 37.037 0.00 0.12 0.00 2.87
2172 3338 6.590068 ACAGCAGAGCAGAATAATTATGTCT 58.410 36.000 0.00 2.12 0.00 3.41
2173 3339 6.346439 CGACAGCAGAGCAGAATAATTATGTC 60.346 42.308 0.00 0.00 0.00 3.06
2174 3340 5.464722 CGACAGCAGAGCAGAATAATTATGT 59.535 40.000 0.00 0.00 0.00 2.29
2175 3341 5.107182 CCGACAGCAGAGCAGAATAATTATG 60.107 44.000 0.00 0.00 0.00 1.90
2176 3342 4.993584 CCGACAGCAGAGCAGAATAATTAT 59.006 41.667 0.00 0.00 0.00 1.28
2177 3343 4.371786 CCGACAGCAGAGCAGAATAATTA 58.628 43.478 0.00 0.00 0.00 1.40
2263 3437 3.213249 ACAGAACTACTAGCCGTTTCG 57.787 47.619 0.00 0.00 0.00 3.46
2287 3461 2.415608 GGCCGTCCGATCAGTCTCA 61.416 63.158 0.00 0.00 0.00 3.27
2289 3463 3.148279 GGGCCGTCCGATCAGTCT 61.148 66.667 0.00 0.00 0.00 3.24
2291 3465 2.683933 AAGGGCCGTCCGATCAGT 60.684 61.111 0.00 0.00 41.52 3.41
2324 3498 4.382320 TGTAAGCGCGGGTGGTCC 62.382 66.667 8.83 0.00 0.00 4.46
2326 3500 4.692475 GGTGTAAGCGCGGGTGGT 62.692 66.667 8.83 0.00 0.00 4.16
2327 3501 4.388499 AGGTGTAAGCGCGGGTGG 62.388 66.667 8.83 0.00 40.95 4.61
2334 3508 1.372997 ACACTGCGAGGTGTAAGCG 60.373 57.895 11.19 0.00 46.89 4.68
2340 3514 0.249868 TCCAAGAACACTGCGAGGTG 60.250 55.000 6.64 6.64 42.34 4.00
2341 3515 0.034059 CTCCAAGAACACTGCGAGGT 59.966 55.000 0.00 0.00 0.00 3.85
2342 3516 0.034059 ACTCCAAGAACACTGCGAGG 59.966 55.000 0.00 0.00 0.00 4.63
2343 3517 2.029828 ACTACTCCAAGAACACTGCGAG 60.030 50.000 0.00 0.00 0.00 5.03
2344 3518 1.961394 ACTACTCCAAGAACACTGCGA 59.039 47.619 0.00 0.00 0.00 5.10
2345 3519 2.440539 ACTACTCCAAGAACACTGCG 57.559 50.000 0.00 0.00 0.00 5.18
2346 3520 4.252971 TGTACTACTCCAAGAACACTGC 57.747 45.455 0.00 0.00 0.00 4.40
2347 3521 6.920817 TGTATGTACTACTCCAAGAACACTG 58.079 40.000 0.00 0.00 0.00 3.66
2348 3522 6.153000 CCTGTATGTACTACTCCAAGAACACT 59.847 42.308 0.00 0.00 0.00 3.55
2349 3523 6.331061 CCTGTATGTACTACTCCAAGAACAC 58.669 44.000 0.00 0.00 0.00 3.32
2350 3524 5.105473 GCCTGTATGTACTACTCCAAGAACA 60.105 44.000 0.00 0.00 0.00 3.18
2351 3525 5.105473 TGCCTGTATGTACTACTCCAAGAAC 60.105 44.000 0.00 0.00 0.00 3.01
2352 3526 5.020795 TGCCTGTATGTACTACTCCAAGAA 58.979 41.667 0.00 0.00 0.00 2.52
2353 3527 4.401519 GTGCCTGTATGTACTACTCCAAGA 59.598 45.833 0.00 0.00 0.00 3.02
2354 3528 4.159693 TGTGCCTGTATGTACTACTCCAAG 59.840 45.833 0.00 0.00 0.00 3.61
2355 3529 4.090819 TGTGCCTGTATGTACTACTCCAA 58.909 43.478 0.00 0.00 0.00 3.53
2356 3530 3.699538 CTGTGCCTGTATGTACTACTCCA 59.300 47.826 0.00 0.00 0.00 3.86
2357 3531 3.491104 GCTGTGCCTGTATGTACTACTCC 60.491 52.174 0.00 0.00 0.00 3.85
2358 3532 3.130516 TGCTGTGCCTGTATGTACTACTC 59.869 47.826 0.00 0.00 0.00 2.59
2359 3533 3.096852 TGCTGTGCCTGTATGTACTACT 58.903 45.455 0.00 0.00 0.00 2.57
2360 3534 3.448686 CTGCTGTGCCTGTATGTACTAC 58.551 50.000 0.00 0.00 0.00 2.73
2361 3535 2.159099 GCTGCTGTGCCTGTATGTACTA 60.159 50.000 0.00 0.00 0.00 1.82
2362 3536 1.406069 GCTGCTGTGCCTGTATGTACT 60.406 52.381 0.00 0.00 0.00 2.73
2363 3537 1.009829 GCTGCTGTGCCTGTATGTAC 58.990 55.000 0.00 0.00 0.00 2.90
2364 3538 0.612744 TGCTGCTGTGCCTGTATGTA 59.387 50.000 0.00 0.00 0.00 2.29
2365 3539 0.034767 ATGCTGCTGTGCCTGTATGT 60.035 50.000 0.00 0.00 0.00 2.29
2366 3540 0.380733 CATGCTGCTGTGCCTGTATG 59.619 55.000 0.00 0.00 0.00 2.39
2367 3541 0.750546 CCATGCTGCTGTGCCTGTAT 60.751 55.000 0.00 0.00 0.00 2.29
2388 3562 3.457380 AGAGAGAGAGAGAGAGACATGCT 59.543 47.826 0.00 0.00 0.00 3.79
2396 3570 5.948742 TGTATGTCAGAGAGAGAGAGAGA 57.051 43.478 0.00 0.00 0.00 3.10
2397 3571 7.389803 TTTTGTATGTCAGAGAGAGAGAGAG 57.610 40.000 0.00 0.00 0.00 3.20
2398 3572 7.833682 AGATTTTGTATGTCAGAGAGAGAGAGA 59.166 37.037 0.00 0.00 0.00 3.10
2435 3609 3.199727 TCACATGCAAGCCTGTATTCCTA 59.800 43.478 2.71 0.00 0.00 2.94
2440 3614 1.004628 TGGTCACATGCAAGCCTGTAT 59.995 47.619 2.71 0.00 0.00 2.29
2461 3635 1.794701 CATGTGCGACCTAATGATCGG 59.205 52.381 0.00 0.00 38.78 4.18
2514 3688 5.648092 ACTGCTGTAGTTCTCAAAAACAGTT 59.352 36.000 0.00 0.00 39.74 3.16
2515 3689 5.186198 ACTGCTGTAGTTCTCAAAAACAGT 58.814 37.500 0.00 0.00 39.74 3.55
2516 3690 5.741388 ACTGCTGTAGTTCTCAAAAACAG 57.259 39.130 0.00 0.00 40.38 3.16
2518 3692 6.598753 TGTACTGCTGTAGTTCTCAAAAAC 57.401 37.500 3.17 0.00 40.89 2.43
2635 3812 6.128526 GGAAATTAAGTTCGGAGAGTTGTGAG 60.129 42.308 9.36 0.00 38.43 3.51
2646 3823 4.332828 AGGGACAAGGAAATTAAGTTCGG 58.667 43.478 9.36 4.69 0.00 4.30
2648 3825 6.652062 TCGTAAGGGACAAGGAAATTAAGTTC 59.348 38.462 7.11 7.11 38.47 3.01
2652 3830 6.713276 TGATCGTAAGGGACAAGGAAATTAA 58.287 36.000 0.00 0.00 38.47 1.40
2653 3831 6.302535 TGATCGTAAGGGACAAGGAAATTA 57.697 37.500 0.00 0.00 38.47 1.40
2654 3832 5.174037 TGATCGTAAGGGACAAGGAAATT 57.826 39.130 0.00 0.00 38.47 1.82
2655 3833 4.837093 TGATCGTAAGGGACAAGGAAAT 57.163 40.909 0.00 0.00 38.47 2.17
2656 3834 4.627284 TTGATCGTAAGGGACAAGGAAA 57.373 40.909 0.00 0.00 38.47 3.13
2657 3835 4.019681 ACATTGATCGTAAGGGACAAGGAA 60.020 41.667 0.00 0.00 33.29 3.36
2661 3839 4.006989 CCAACATTGATCGTAAGGGACAA 58.993 43.478 0.00 0.00 38.47 3.18
2666 3846 3.517602 TCGTCCAACATTGATCGTAAGG 58.482 45.455 0.00 0.00 38.47 2.69
2676 3856 2.030007 CCTGCATTGTTCGTCCAACATT 60.030 45.455 0.00 0.00 44.77 2.71
2679 3859 0.387239 GCCTGCATTGTTCGTCCAAC 60.387 55.000 0.00 0.00 35.28 3.77
2680 3860 1.851021 CGCCTGCATTGTTCGTCCAA 61.851 55.000 0.00 0.00 0.00 3.53
2681 3861 2.324330 CGCCTGCATTGTTCGTCCA 61.324 57.895 0.00 0.00 0.00 4.02
2682 3862 2.240612 GACGCCTGCATTGTTCGTCC 62.241 60.000 12.28 0.64 42.34 4.79
2684 3864 2.667318 CGACGCCTGCATTGTTCGT 61.667 57.895 0.00 0.00 35.98 3.85
2798 3989 1.153667 GAAGAGGTCCAGCAGCGAG 60.154 63.158 0.00 0.00 0.00 5.03
3118 4315 9.517609 GTACATCTCAACTAACTGTTATCGATT 57.482 33.333 1.71 0.00 37.07 3.34
3125 4322 8.585881 ACTGTATGTACATCTCAACTAACTGTT 58.414 33.333 12.68 0.00 35.95 3.16
3126 4323 8.123639 ACTGTATGTACATCTCAACTAACTGT 57.876 34.615 12.68 9.36 35.36 3.55
3136 4333 5.063944 CCTGTTGCAACTGTATGTACATCTC 59.936 44.000 28.61 7.75 35.36 2.75
3137 4334 4.937620 CCTGTTGCAACTGTATGTACATCT 59.062 41.667 28.61 0.00 35.36 2.90
3155 4352 4.042934 ACCAATCTAGCTAACCAACCTGTT 59.957 41.667 0.00 0.00 0.00 3.16
3159 4356 4.569564 CGTAACCAATCTAGCTAACCAACC 59.430 45.833 0.00 0.00 0.00 3.77
3219 4416 2.322081 CCAAACCCGTACAGCCACG 61.322 63.158 0.00 0.00 41.59 4.94
3220 4417 2.622962 GCCAAACCCGTACAGCCAC 61.623 63.158 0.00 0.00 0.00 5.01
3221 4418 2.281900 GCCAAACCCGTACAGCCA 60.282 61.111 0.00 0.00 0.00 4.75
3222 4419 3.060000 GGCCAAACCCGTACAGCC 61.060 66.667 0.00 0.00 0.00 4.85
3223 4420 3.428282 CGGCCAAACCCGTACAGC 61.428 66.667 2.24 0.00 43.24 4.40
3224 4421 2.744709 CCGGCCAAACCCGTACAG 60.745 66.667 2.24 0.00 46.71 2.74
3225 4422 3.534054 GACCGGCCAAACCCGTACA 62.534 63.158 0.00 0.00 46.71 2.90
3314 4512 5.106869 GCAACATGCATTGATCAACATTGTT 60.107 36.000 11.07 14.47 44.26 2.83
3378 4576 1.000060 CAAGCCACAAGTTCCACATGG 60.000 52.381 0.00 0.00 0.00 3.66
3403 4638 0.673644 AATGTTTCAGTCGGCCGGAG 60.674 55.000 27.83 15.61 0.00 4.63
3433 4681 6.468319 CGATCAAGATCAAAAGCAAGATGAAC 59.532 38.462 10.39 0.00 37.69 3.18
3435 4683 5.448225 GCGATCAAGATCAAAAGCAAGATGA 60.448 40.000 10.39 0.00 37.69 2.92
3578 4828 3.155167 CCGAGGCTGTAGGGGTCC 61.155 72.222 0.00 0.00 0.00 4.46
4027 5295 1.153745 CCACGAGAAGGAGAAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
4028 5296 0.608640 TTCCACGAGAAGGAGAAGGC 59.391 55.000 0.00 0.00 36.33 4.35
4029 5297 2.563179 TCTTTCCACGAGAAGGAGAAGG 59.437 50.000 0.00 0.00 35.78 3.46
4030 5298 3.944055 TCTTTCCACGAGAAGGAGAAG 57.056 47.619 0.00 0.00 35.78 2.85
4052 5325 1.319799 CCCTCTCAATCCCCTCCCT 59.680 63.158 0.00 0.00 0.00 4.20
4053 5326 1.004891 ACCCTCTCAATCCCCTCCC 59.995 63.158 0.00 0.00 0.00 4.30
4071 5344 3.981211 TGAATCAATCGATCGATGCTGA 58.019 40.909 29.99 27.90 34.70 4.26
4125 5398 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
4126 5399 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
4127 5400 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
4128 5401 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
4129 5402 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
4138 5411 9.900710 CAGTGATCTAAACGCTCTTATATTAGT 57.099 33.333 0.00 0.00 0.00 2.24
4141 5414 9.469807 CTTCAGTGATCTAAACGCTCTTATATT 57.530 33.333 0.00 0.00 0.00 1.28
4142 5415 8.634444 ACTTCAGTGATCTAAACGCTCTTATAT 58.366 33.333 0.00 0.00 0.00 0.86
4143 5416 7.997482 ACTTCAGTGATCTAAACGCTCTTATA 58.003 34.615 0.00 0.00 0.00 0.98
4144 5417 6.868622 ACTTCAGTGATCTAAACGCTCTTAT 58.131 36.000 0.00 0.00 0.00 1.73
4145 5418 6.268825 ACTTCAGTGATCTAAACGCTCTTA 57.731 37.500 0.00 0.00 0.00 2.10
4146 5419 5.140747 ACTTCAGTGATCTAAACGCTCTT 57.859 39.130 0.00 0.00 0.00 2.85
4147 5420 4.792521 ACTTCAGTGATCTAAACGCTCT 57.207 40.909 0.00 0.00 0.00 4.09
4148 5421 5.642686 ACTACTTCAGTGATCTAAACGCTC 58.357 41.667 0.00 0.00 35.62 5.03
4149 5422 5.646577 ACTACTTCAGTGATCTAAACGCT 57.353 39.130 0.00 0.00 35.62 5.07
4161 5434 6.456501 AGAGCGTTTAAATCACTACTTCAGT 58.543 36.000 0.00 0.00 38.32 3.41
4162 5435 6.952935 AGAGCGTTTAAATCACTACTTCAG 57.047 37.500 0.00 0.00 0.00 3.02
4163 5436 8.997621 ATAAGAGCGTTTAAATCACTACTTCA 57.002 30.769 0.00 0.00 0.00 3.02
4176 5449 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
4177 5450 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
4178 5451 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
4179 5452 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
4180 5453 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
4181 5454 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
4182 5455 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
4183 5456 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
4184 5457 9.294614 ACTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
4187 5460 9.294614 CTTACTACTCCCTCCGTAAACTAATAT 57.705 37.037 0.00 0.00 0.00 1.28
4188 5461 8.275040 ACTTACTACTCCCTCCGTAAACTAATA 58.725 37.037 0.00 0.00 0.00 0.98
4189 5462 7.122048 ACTTACTACTCCCTCCGTAAACTAAT 58.878 38.462 0.00 0.00 0.00 1.73
4190 5463 6.485171 ACTTACTACTCCCTCCGTAAACTAA 58.515 40.000 0.00 0.00 0.00 2.24
4191 5464 6.067217 ACTTACTACTCCCTCCGTAAACTA 57.933 41.667 0.00 0.00 0.00 2.24
4192 5465 4.928263 ACTTACTACTCCCTCCGTAAACT 58.072 43.478 0.00 0.00 0.00 2.66
4193 5466 5.651387 AACTTACTACTCCCTCCGTAAAC 57.349 43.478 0.00 0.00 0.00 2.01
4194 5467 7.961326 AATAACTTACTACTCCCTCCGTAAA 57.039 36.000 0.00 0.00 0.00 2.01
4196 5469 9.726438 GTATAATAACTTACTACTCCCTCCGTA 57.274 37.037 0.00 0.00 0.00 4.02
4197 5470 8.443979 AGTATAATAACTTACTACTCCCTCCGT 58.556 37.037 0.00 0.00 0.00 4.69
4198 5471 8.860780 AGTATAATAACTTACTACTCCCTCCG 57.139 38.462 0.00 0.00 0.00 4.63
4253 5528 1.135112 TGCACGCATACTGGAGTACTG 60.135 52.381 0.00 0.00 32.72 2.74
4308 5583 3.202151 TCTTTAATTACAGGCCAGGGAGG 59.798 47.826 5.01 0.00 41.84 4.30
4362 5637 5.649557 TCATCAAGAAAACAACACTTGTGG 58.350 37.500 5.72 0.00 44.59 4.17
4384 5659 4.840911 TGCATTCGAGTGTAGTACGTATC 58.159 43.478 9.83 0.00 0.00 2.24
4385 5660 4.888038 TGCATTCGAGTGTAGTACGTAT 57.112 40.909 9.83 0.00 0.00 3.06
4387 5662 3.499048 CTTGCATTCGAGTGTAGTACGT 58.501 45.455 9.83 0.00 0.00 3.57
4388 5663 2.279136 GCTTGCATTCGAGTGTAGTACG 59.721 50.000 9.83 0.00 0.00 3.67
4389 5664 3.250744 TGCTTGCATTCGAGTGTAGTAC 58.749 45.455 9.83 0.00 0.00 2.73
4392 5667 2.610433 TCTGCTTGCATTCGAGTGTAG 58.390 47.619 9.83 8.47 0.00 2.74
4433 5770 1.669115 CCTGCCAAGGTCGTCAGTG 60.669 63.158 0.00 0.00 38.96 3.66
4475 5828 5.932303 TGTGCTAGTGAGACTTATGTTTTCC 59.068 40.000 0.00 0.00 0.00 3.13
4529 5882 4.181578 GCCAGTCATGTTCGTAGTGTTAT 58.818 43.478 0.00 0.00 0.00 1.89
4541 5895 2.627515 AGCGAATATGCCAGTCATGT 57.372 45.000 0.00 0.00 36.63 3.21
4542 5896 3.392882 TGTAGCGAATATGCCAGTCATG 58.607 45.455 0.00 0.00 36.63 3.07
4543 5897 3.751479 TGTAGCGAATATGCCAGTCAT 57.249 42.857 0.00 0.00 39.17 3.06
4545 5899 3.194861 TGTTGTAGCGAATATGCCAGTC 58.805 45.455 0.00 0.00 34.65 3.51
4546 5900 3.260475 TGTTGTAGCGAATATGCCAGT 57.740 42.857 0.00 0.00 34.65 4.00
4547 5901 5.119279 GTCTATGTTGTAGCGAATATGCCAG 59.881 44.000 0.00 0.00 34.65 4.85
4558 5912 6.102897 AGATACCCATGTCTATGTTGTAGC 57.897 41.667 0.00 0.00 31.54 3.58
4611 5965 2.239400 CGAGTGGAGATATACAGCCCA 58.761 52.381 0.00 0.00 0.00 5.36
4620 5974 3.577805 TCTCATCACCGAGTGGAGATA 57.422 47.619 4.52 0.00 42.84 1.98
4630 5984 3.722728 TGATGTCTGATCTCATCACCG 57.277 47.619 17.83 0.00 43.29 4.94
4650 6004 1.196104 TAGGGTAAGGGCGTGCAAGT 61.196 55.000 0.59 0.00 0.00 3.16
4653 6007 1.498264 TATTAGGGTAAGGGCGTGCA 58.502 50.000 0.00 0.00 0.00 4.57
4657 6011 2.922740 TGCTTATTAGGGTAAGGGCG 57.077 50.000 0.00 0.00 33.31 6.13
4695 6235 1.561769 ATTGAGGACATGGACCGGCA 61.562 55.000 0.00 0.00 0.00 5.69
4699 6239 3.826157 TGTTGAAATTGAGGACATGGACC 59.174 43.478 0.00 0.00 0.00 4.46
4734 6274 0.828022 ATCCGTAAGCCATCGTTGGA 59.172 50.000 16.83 0.00 46.92 3.53
4787 6327 5.606749 TGTGAGATGGGCTGTAAATATAGGT 59.393 40.000 0.00 0.00 0.00 3.08
4791 6331 6.191657 TGATGTGAGATGGGCTGTAAATAT 57.808 37.500 0.00 0.00 0.00 1.28
4948 6489 4.764823 GGACTGTTGGGACATGAAATTACA 59.235 41.667 0.00 0.00 39.30 2.41
4949 6490 4.764823 TGGACTGTTGGGACATGAAATTAC 59.235 41.667 0.00 0.00 39.30 1.89
4950 6491 4.991776 TGGACTGTTGGGACATGAAATTA 58.008 39.130 0.00 0.00 39.30 1.40
4951 6492 3.843422 TGGACTGTTGGGACATGAAATT 58.157 40.909 0.00 0.00 39.30 1.82
4952 6493 3.524095 TGGACTGTTGGGACATGAAAT 57.476 42.857 0.00 0.00 39.30 2.17
4953 6494 2.955660 GTTGGACTGTTGGGACATGAAA 59.044 45.455 0.00 0.00 39.30 2.69
4954 6495 2.174639 AGTTGGACTGTTGGGACATGAA 59.825 45.455 0.00 0.00 39.30 2.57
4955 6496 1.774254 AGTTGGACTGTTGGGACATGA 59.226 47.619 0.00 0.00 39.30 3.07
4956 6497 2.276732 AGTTGGACTGTTGGGACATG 57.723 50.000 0.00 0.00 39.30 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.