Multiple sequence alignment - TraesCS4A01G337000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G337000 chr4A 100.000 2709 0 0 1 2709 619311282 619313990 0.000000e+00 5003.0
1 TraesCS4A01G337000 chr4A 94.656 393 18 3 1 391 137171938 137171547 8.300000e-170 606.0
2 TraesCS4A01G337000 chr4A 80.499 682 75 30 1017 1659 619333677 619334339 1.140000e-128 470.0
3 TraesCS4A01G337000 chr4A 80.405 592 83 23 1065 1641 619370082 619370655 1.160000e-113 420.0
4 TraesCS4A01G337000 chr4A 89.912 228 15 8 1899 2122 736486691 736486914 1.230000e-73 287.0
5 TraesCS4A01G337000 chr2A 95.128 390 17 2 1 388 621443740 621444129 4.960000e-172 614.0
6 TraesCS4A01G337000 chr2A 94.629 391 20 1 1 390 710361032 710360642 2.980000e-169 604.0
7 TraesCS4A01G337000 chr2A 91.667 216 14 4 1902 2115 755071986 755071773 2.040000e-76 296.0
8 TraesCS4A01G337000 chr6A 94.656 393 20 1 1 392 6615938 6616330 2.310000e-170 608.0
9 TraesCS4A01G337000 chr6A 92.417 211 14 1 1903 2113 614859020 614858812 1.580000e-77 300.0
10 TraesCS4A01G337000 chr6A 89.862 217 22 0 1897 2113 13923248 13923464 2.050000e-71 279.0
11 TraesCS4A01G337000 chr5A 95.078 386 18 1 1 385 697709053 697709438 8.300000e-170 606.0
12 TraesCS4A01G337000 chr5A 90.995 211 17 2 1903 2112 606357031 606356822 1.590000e-72 283.0
13 TraesCS4A01G337000 chr7A 94.388 392 20 2 1 390 276128025 276127634 3.860000e-168 601.0
14 TraesCS4A01G337000 chr1A 94.162 394 21 2 1 392 131779047 131779440 1.390000e-167 599.0
15 TraesCS4A01G337000 chr1A 94.148 393 22 1 1 392 534887349 534886957 4.990000e-167 597.0
16 TraesCS4A01G337000 chr3B 93.548 403 22 4 1 402 379991473 379991074 4.990000e-167 597.0
17 TraesCS4A01G337000 chr5D 80.029 691 72 30 1017 1659 548460547 548461219 4.110000e-123 451.0
18 TraesCS4A01G337000 chr5D 82.685 514 46 21 402 890 548373783 548374278 1.500000e-112 416.0
19 TraesCS4A01G337000 chr5D 79.639 609 71 26 1065 1641 548479695 548480282 3.270000e-104 388.0
20 TraesCS4A01G337000 chr5D 83.239 352 22 17 1305 1653 548374288 548374605 3.410000e-74 289.0
21 TraesCS4A01G337000 chr5D 80.455 220 17 11 1673 1878 548374669 548374876 7.820000e-31 145.0
22 TraesCS4A01G337000 chr5D 75.897 195 16 13 1723 1903 548368412 548368589 1.350000e-08 71.3
23 TraesCS4A01G337000 chr5B 83.029 548 36 24 402 923 692648192 692648708 6.880000e-121 444.0
24 TraesCS4A01G337000 chr5B 79.512 615 72 30 1065 1644 692678744 692679339 3.270000e-104 388.0
25 TraesCS4A01G337000 chr5B 83.679 386 38 12 2313 2684 692649574 692649948 9.290000e-90 340.0
26 TraesCS4A01G337000 chr5B 87.889 289 23 2 1365 1641 692691503 692691791 2.010000e-86 329.0
27 TraesCS4A01G337000 chr5B 88.696 230 20 3 1048 1274 692648838 692649064 2.660000e-70 276.0
28 TraesCS4A01G337000 chr5B 77.558 557 58 34 695 1190 692690796 692691346 9.560000e-70 274.0
29 TraesCS4A01G337000 chr5B 83.871 186 22 2 2119 2304 692649337 692649514 1.290000e-38 171.0
30 TraesCS4A01G337000 chr5B 77.778 171 14 9 1722 1878 692635661 692635821 1.730000e-12 84.2
31 TraesCS4A01G337000 chr2B 92.417 211 16 0 1903 2113 225229222 225229432 4.380000e-78 302.0
32 TraesCS4A01G337000 chr3D 89.362 235 24 1 1889 2123 70280422 70280655 7.340000e-76 294.0
33 TraesCS4A01G337000 chr3D 89.189 222 23 1 1892 2113 136563037 136563257 2.660000e-70 276.0
34 TraesCS4A01G337000 chr1B 92.233 206 16 0 1907 2112 3653490 3653695 2.640000e-75 292.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G337000 chr4A 619311282 619313990 2708 False 5003.000000 5003 100.000000 1 2709 1 chr4A.!!$F1 2708
1 TraesCS4A01G337000 chr4A 619333677 619334339 662 False 470.000000 470 80.499000 1017 1659 1 chr4A.!!$F2 642
2 TraesCS4A01G337000 chr4A 619370082 619370655 573 False 420.000000 420 80.405000 1065 1641 1 chr4A.!!$F3 576
3 TraesCS4A01G337000 chr5D 548460547 548461219 672 False 451.000000 451 80.029000 1017 1659 1 chr5D.!!$F2 642
4 TraesCS4A01G337000 chr5D 548479695 548480282 587 False 388.000000 388 79.639000 1065 1641 1 chr5D.!!$F3 576
5 TraesCS4A01G337000 chr5D 548373783 548374876 1093 False 283.333333 416 82.126333 402 1878 3 chr5D.!!$F4 1476
6 TraesCS4A01G337000 chr5B 692678744 692679339 595 False 388.000000 388 79.512000 1065 1644 1 chr5B.!!$F2 579
7 TraesCS4A01G337000 chr5B 692648192 692649948 1756 False 307.750000 444 84.818750 402 2684 4 chr5B.!!$F3 2282
8 TraesCS4A01G337000 chr5B 692690796 692691791 995 False 301.500000 329 82.723500 695 1641 2 chr5B.!!$F4 946

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
405 406 0.030908 CTTAGGTAGAGAAGCCGCGG 59.969 60.0 24.05 24.05 0.0 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1986 2270 0.033503 ATTTTAAGGAGGTGGGGCCG 60.034 55.0 0.0 0.0 43.7 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.741476 GGAAACGCCCAGCTGCTG 61.741 66.667 22.44 22.44 0.00 4.41
24 25 2.980233 GAAACGCCCAGCTGCTGT 60.980 61.111 26.41 8.37 0.00 4.40
25 26 3.259425 GAAACGCCCAGCTGCTGTG 62.259 63.158 26.41 17.87 0.00 3.66
31 32 4.421515 CCAGCTGCTGTGGGAGGG 62.422 72.222 26.41 7.20 0.00 4.30
32 33 4.421515 CAGCTGCTGTGGGAGGGG 62.422 72.222 21.21 0.00 0.00 4.79
35 36 4.421515 CTGCTGTGGGAGGGGCTG 62.422 72.222 0.00 0.00 0.00 4.85
61 62 1.446731 CGAAGCGCTGCTATTTTTCG 58.553 50.000 12.58 10.47 38.25 3.46
62 63 1.815132 GAAGCGCTGCTATTTTTCGG 58.185 50.000 12.58 0.00 38.25 4.30
63 64 0.179163 AAGCGCTGCTATTTTTCGGC 60.179 50.000 12.58 0.00 38.25 5.54
65 66 4.690159 GCTGCTATTTTTCGGCGG 57.310 55.556 7.21 0.00 35.66 6.13
66 67 1.064134 GCTGCTATTTTTCGGCGGG 59.936 57.895 7.21 0.00 33.44 6.13
67 68 1.727467 CTGCTATTTTTCGGCGGGG 59.273 57.895 7.21 0.00 0.00 5.73
68 69 0.746563 CTGCTATTTTTCGGCGGGGA 60.747 55.000 7.21 0.00 0.00 4.81
69 70 0.322636 TGCTATTTTTCGGCGGGGAA 60.323 50.000 7.21 0.00 0.00 3.97
70 71 1.029681 GCTATTTTTCGGCGGGGAAT 58.970 50.000 7.21 7.37 0.00 3.01
71 72 1.269051 GCTATTTTTCGGCGGGGAATG 60.269 52.381 7.21 2.06 0.00 2.67
72 73 1.336755 CTATTTTTCGGCGGGGAATGG 59.663 52.381 7.21 3.19 0.00 3.16
73 74 1.955495 ATTTTTCGGCGGGGAATGGC 61.955 55.000 7.21 0.00 0.00 4.40
74 75 3.577334 TTTTCGGCGGGGAATGGCT 62.577 57.895 7.21 0.00 0.00 4.75
75 76 2.199613 TTTTCGGCGGGGAATGGCTA 62.200 55.000 7.21 0.00 0.00 3.93
76 77 1.990160 TTTCGGCGGGGAATGGCTAT 61.990 55.000 7.21 0.00 0.00 2.97
77 78 2.358737 CGGCGGGGAATGGCTATC 60.359 66.667 0.00 0.00 0.00 2.08
78 79 2.883828 CGGCGGGGAATGGCTATCT 61.884 63.158 0.00 0.00 0.00 1.98
79 80 1.541310 CGGCGGGGAATGGCTATCTA 61.541 60.000 0.00 0.00 0.00 1.98
80 81 0.036294 GGCGGGGAATGGCTATCTAC 60.036 60.000 0.00 0.00 0.00 2.59
81 82 0.036294 GCGGGGAATGGCTATCTACC 60.036 60.000 0.00 0.00 0.00 3.18
82 83 0.246635 CGGGGAATGGCTATCTACCG 59.753 60.000 5.21 5.21 33.53 4.02
83 84 0.613777 GGGGAATGGCTATCTACCGG 59.386 60.000 0.00 0.00 0.00 5.28
84 85 1.640917 GGGAATGGCTATCTACCGGA 58.359 55.000 9.46 0.00 0.00 5.14
85 86 1.550976 GGGAATGGCTATCTACCGGAG 59.449 57.143 9.46 0.60 0.00 4.63
86 87 2.249139 GGAATGGCTATCTACCGGAGT 58.751 52.381 9.46 0.00 0.00 3.85
87 88 3.428532 GGAATGGCTATCTACCGGAGTA 58.571 50.000 9.46 0.00 0.00 2.59
88 89 3.444388 GGAATGGCTATCTACCGGAGTAG 59.556 52.174 9.46 0.00 46.34 2.57
89 90 2.581216 TGGCTATCTACCGGAGTAGG 57.419 55.000 9.46 0.00 45.24 3.18
90 91 1.075050 TGGCTATCTACCGGAGTAGGG 59.925 57.143 9.46 0.00 45.24 3.53
91 92 1.175654 GCTATCTACCGGAGTAGGGC 58.824 60.000 9.46 1.50 45.24 5.19
92 93 1.451067 CTATCTACCGGAGTAGGGCG 58.549 60.000 9.46 0.00 45.24 6.13
93 94 0.037303 TATCTACCGGAGTAGGGCGG 59.963 60.000 9.46 0.00 45.24 6.13
94 95 3.603671 CTACCGGAGTAGGGCGGC 61.604 72.222 9.46 0.00 42.05 6.53
112 113 3.672293 GGTCGTCGCCGGGATATA 58.328 61.111 2.18 0.00 33.95 0.86
113 114 1.505353 GGTCGTCGCCGGGATATAG 59.495 63.158 2.18 0.00 33.95 1.31
114 115 1.154073 GTCGTCGCCGGGATATAGC 60.154 63.158 2.18 0.00 33.95 2.97
115 116 1.303074 TCGTCGCCGGGATATAGCT 60.303 57.895 2.18 0.00 33.95 3.32
116 117 0.036105 TCGTCGCCGGGATATAGCTA 60.036 55.000 2.18 0.00 33.95 3.32
117 118 0.377554 CGTCGCCGGGATATAGCTAG 59.622 60.000 2.18 0.00 0.00 3.42
118 119 1.461559 GTCGCCGGGATATAGCTAGT 58.538 55.000 2.18 0.00 0.00 2.57
119 120 1.132643 GTCGCCGGGATATAGCTAGTG 59.867 57.143 2.18 0.00 0.00 2.74
120 121 0.456221 CGCCGGGATATAGCTAGTGG 59.544 60.000 2.18 0.00 0.00 4.00
121 122 1.558233 GCCGGGATATAGCTAGTGGT 58.442 55.000 2.18 0.00 0.00 4.16
122 123 1.204941 GCCGGGATATAGCTAGTGGTG 59.795 57.143 2.18 0.00 0.00 4.17
123 124 1.825474 CCGGGATATAGCTAGTGGTGG 59.175 57.143 0.00 0.00 0.00 4.61
124 125 1.204941 CGGGATATAGCTAGTGGTGGC 59.795 57.143 0.00 0.00 0.00 5.01
125 126 1.555533 GGGATATAGCTAGTGGTGGCC 59.444 57.143 0.00 0.00 0.00 5.36
126 127 1.204941 GGATATAGCTAGTGGTGGCCG 59.795 57.143 0.00 0.00 0.00 6.13
127 128 2.168496 GATATAGCTAGTGGTGGCCGA 58.832 52.381 0.00 0.00 0.00 5.54
128 129 1.617322 TATAGCTAGTGGTGGCCGAG 58.383 55.000 0.00 0.00 0.00 4.63
129 130 1.115930 ATAGCTAGTGGTGGCCGAGG 61.116 60.000 0.00 0.00 0.00 4.63
130 131 4.162690 GCTAGTGGTGGCCGAGGG 62.163 72.222 0.00 0.00 0.00 4.30
159 160 3.755628 CGAGGCGAGTCGGGGAAA 61.756 66.667 15.52 0.00 36.26 3.13
160 161 2.184579 GAGGCGAGTCGGGGAAAG 59.815 66.667 15.52 0.00 0.00 2.62
161 162 2.283676 AGGCGAGTCGGGGAAAGA 60.284 61.111 15.52 0.00 0.00 2.52
162 163 1.885163 GAGGCGAGTCGGGGAAAGAA 61.885 60.000 15.52 0.00 0.00 2.52
163 164 1.004200 GGCGAGTCGGGGAAAGAAA 60.004 57.895 15.52 0.00 0.00 2.52
164 165 0.604511 GGCGAGTCGGGGAAAGAAAA 60.605 55.000 15.52 0.00 0.00 2.29
165 166 0.516001 GCGAGTCGGGGAAAGAAAAC 59.484 55.000 15.52 0.00 0.00 2.43
166 167 1.154197 CGAGTCGGGGAAAGAAAACC 58.846 55.000 4.10 0.00 0.00 3.27
167 168 1.270678 CGAGTCGGGGAAAGAAAACCT 60.271 52.381 4.10 0.00 0.00 3.50
168 169 2.809299 CGAGTCGGGGAAAGAAAACCTT 60.809 50.000 4.10 0.00 36.47 3.50
169 170 2.552743 GAGTCGGGGAAAGAAAACCTTG 59.447 50.000 0.00 0.00 34.79 3.61
170 171 2.173996 AGTCGGGGAAAGAAAACCTTGA 59.826 45.455 0.00 0.00 34.79 3.02
171 172 2.292569 GTCGGGGAAAGAAAACCTTGAC 59.707 50.000 0.00 0.00 34.79 3.18
172 173 2.173996 TCGGGGAAAGAAAACCTTGACT 59.826 45.455 0.00 0.00 34.79 3.41
173 174 2.956333 CGGGGAAAGAAAACCTTGACTT 59.044 45.455 0.00 0.00 34.79 3.01
174 175 3.383505 CGGGGAAAGAAAACCTTGACTTT 59.616 43.478 0.00 0.00 34.79 2.66
175 176 4.142026 CGGGGAAAGAAAACCTTGACTTTT 60.142 41.667 0.00 0.00 34.79 2.27
176 177 5.357257 GGGGAAAGAAAACCTTGACTTTTC 58.643 41.667 0.00 0.00 37.73 2.29
177 178 5.357257 GGGAAAGAAAACCTTGACTTTTCC 58.643 41.667 0.00 0.00 39.68 3.13
178 179 5.357257 GGAAAGAAAACCTTGACTTTTCCC 58.643 41.667 0.00 0.00 38.05 3.97
179 180 5.353394 AAAGAAAACCTTGACTTTTCCCC 57.647 39.130 0.00 0.00 38.05 4.81
180 181 4.265856 AGAAAACCTTGACTTTTCCCCT 57.734 40.909 0.00 0.00 38.05 4.79
181 182 5.397553 AGAAAACCTTGACTTTTCCCCTA 57.602 39.130 0.00 0.00 38.05 3.53
182 183 5.965486 AGAAAACCTTGACTTTTCCCCTAT 58.035 37.500 0.00 0.00 38.05 2.57
183 184 6.010850 AGAAAACCTTGACTTTTCCCCTATC 58.989 40.000 0.00 0.00 38.05 2.08
184 185 3.629142 ACCTTGACTTTTCCCCTATCG 57.371 47.619 0.00 0.00 0.00 2.92
185 186 2.238898 ACCTTGACTTTTCCCCTATCGG 59.761 50.000 0.00 0.00 0.00 4.18
186 187 2.238898 CCTTGACTTTTCCCCTATCGGT 59.761 50.000 0.00 0.00 0.00 4.69
187 188 3.270877 CTTGACTTTTCCCCTATCGGTG 58.729 50.000 0.00 0.00 0.00 4.94
188 189 2.262637 TGACTTTTCCCCTATCGGTGT 58.737 47.619 0.00 0.00 0.00 4.16
189 190 3.443052 TGACTTTTCCCCTATCGGTGTA 58.557 45.455 0.00 0.00 0.00 2.90
190 191 3.449737 TGACTTTTCCCCTATCGGTGTAG 59.550 47.826 0.00 0.00 0.00 2.74
191 192 2.770232 ACTTTTCCCCTATCGGTGTAGG 59.230 50.000 3.38 3.38 40.81 3.18
192 193 1.125633 TTTCCCCTATCGGTGTAGGC 58.874 55.000 4.52 0.00 39.97 3.93
193 194 0.761702 TTCCCCTATCGGTGTAGGCC 60.762 60.000 0.00 0.00 39.97 5.19
194 195 1.458777 CCCCTATCGGTGTAGGCCA 60.459 63.158 5.01 0.00 39.97 5.36
195 196 1.472662 CCCCTATCGGTGTAGGCCAG 61.473 65.000 5.01 0.00 39.97 4.85
196 197 1.472662 CCCTATCGGTGTAGGCCAGG 61.473 65.000 5.01 0.00 39.97 4.45
197 198 1.367840 CTATCGGTGTAGGCCAGGC 59.632 63.158 5.01 1.26 0.00 4.85
198 199 2.421877 CTATCGGTGTAGGCCAGGCG 62.422 65.000 5.01 0.00 0.00 5.52
202 203 4.394712 GTGTAGGCCAGGCGTGCT 62.395 66.667 21.08 8.67 30.99 4.40
203 204 3.636231 TGTAGGCCAGGCGTGCTT 61.636 61.111 21.08 0.65 30.99 3.91
204 205 2.359975 GTAGGCCAGGCGTGCTTT 60.360 61.111 17.33 0.00 0.00 3.51
205 206 1.971695 GTAGGCCAGGCGTGCTTTT 60.972 57.895 17.33 0.00 0.00 2.27
206 207 1.674322 TAGGCCAGGCGTGCTTTTC 60.674 57.895 17.33 0.00 0.00 2.29
207 208 4.056125 GGCCAGGCGTGCTTTTCC 62.056 66.667 5.00 0.00 0.00 3.13
208 209 4.056125 GCCAGGCGTGCTTTTCCC 62.056 66.667 0.00 0.00 0.00 3.97
209 210 2.282462 CCAGGCGTGCTTTTCCCT 60.282 61.111 0.00 0.00 0.00 4.20
210 211 1.002624 CCAGGCGTGCTTTTCCCTA 60.003 57.895 0.00 0.00 0.00 3.53
211 212 1.026718 CCAGGCGTGCTTTTCCCTAG 61.027 60.000 0.00 0.00 0.00 3.02
212 213 1.377333 AGGCGTGCTTTTCCCTAGC 60.377 57.895 0.00 0.00 39.10 3.42
213 214 2.750888 GGCGTGCTTTTCCCTAGCG 61.751 63.158 0.00 0.00 41.54 4.26
214 215 2.785258 CGTGCTTTTCCCTAGCGC 59.215 61.111 0.00 0.00 43.78 5.92
215 216 2.750888 CGTGCTTTTCCCTAGCGCC 61.751 63.158 2.29 0.00 44.22 6.53
216 217 2.435938 TGCTTTTCCCTAGCGCCG 60.436 61.111 2.29 0.00 41.54 6.46
217 218 3.202706 GCTTTTCCCTAGCGCCGG 61.203 66.667 2.29 4.78 0.00 6.13
218 219 2.582436 CTTTTCCCTAGCGCCGGA 59.418 61.111 5.05 9.50 0.00 5.14
219 220 1.521681 CTTTTCCCTAGCGCCGGAG 60.522 63.158 5.05 1.55 0.00 4.63
220 221 3.675619 TTTTCCCTAGCGCCGGAGC 62.676 63.158 23.92 23.92 37.41 4.70
234 235 4.432741 GAGCCCCCAACTGCTCCC 62.433 72.222 0.08 0.00 46.50 4.30
237 238 3.589542 CCCCCAACTGCTCCCCAA 61.590 66.667 0.00 0.00 0.00 4.12
238 239 2.283173 CCCCAACTGCTCCCCAAC 60.283 66.667 0.00 0.00 0.00 3.77
239 240 2.672996 CCCAACTGCTCCCCAACG 60.673 66.667 0.00 0.00 0.00 4.10
240 241 3.365265 CCAACTGCTCCCCAACGC 61.365 66.667 0.00 0.00 0.00 4.84
241 242 3.726517 CAACTGCTCCCCAACGCG 61.727 66.667 3.53 3.53 0.00 6.01
252 253 4.676586 CAACGCGCCGGGTTTGAC 62.677 66.667 17.33 0.00 36.59 3.18
257 258 3.353836 CGCCGGGTTTGACCTGTG 61.354 66.667 2.18 0.00 43.22 3.66
258 259 2.112297 GCCGGGTTTGACCTGTGA 59.888 61.111 2.18 0.00 43.22 3.58
259 260 2.258726 GCCGGGTTTGACCTGTGAC 61.259 63.158 2.18 0.00 43.22 3.67
260 261 1.599797 CCGGGTTTGACCTGTGACC 60.600 63.158 0.00 0.00 43.22 4.02
261 262 1.959226 CGGGTTTGACCTGTGACCG 60.959 63.158 0.00 0.00 39.82 4.79
262 263 2.258726 GGGTTTGACCTGTGACCGC 61.259 63.158 0.00 0.00 38.64 5.68
263 264 2.258726 GGTTTGACCTGTGACCGCC 61.259 63.158 0.00 0.00 34.73 6.13
264 265 2.280524 TTTGACCTGTGACCGCCG 60.281 61.111 0.00 0.00 0.00 6.46
265 266 3.818121 TTTGACCTGTGACCGCCGG 62.818 63.158 0.00 0.00 0.00 6.13
278 279 3.744719 GCCGGGCGGAAAAAGGTC 61.745 66.667 1.81 0.00 37.50 3.85
279 280 3.060000 CCGGGCGGAAAAAGGTCC 61.060 66.667 0.00 0.00 37.50 4.46
295 296 2.398036 CCGAACCGGCGATTTTCG 59.602 61.111 22.71 22.71 41.17 3.46
305 306 2.670401 GCGATTTTCGGCATCCTAAG 57.330 50.000 0.00 0.00 40.84 2.18
306 307 2.210116 GCGATTTTCGGCATCCTAAGA 58.790 47.619 0.00 0.00 40.84 2.10
307 308 2.221981 GCGATTTTCGGCATCCTAAGAG 59.778 50.000 0.00 0.00 40.84 2.85
308 309 2.221981 CGATTTTCGGCATCCTAAGAGC 59.778 50.000 0.00 0.00 36.00 4.09
309 310 1.651987 TTTTCGGCATCCTAAGAGCG 58.348 50.000 0.00 0.00 0.00 5.03
310 311 0.810031 TTTCGGCATCCTAAGAGCGC 60.810 55.000 0.00 0.00 0.00 5.92
311 312 2.954020 TTCGGCATCCTAAGAGCGCG 62.954 60.000 0.00 0.00 0.00 6.86
312 313 2.417516 GGCATCCTAAGAGCGCGA 59.582 61.111 12.10 0.00 0.00 5.87
313 314 1.951631 GGCATCCTAAGAGCGCGAC 60.952 63.158 12.10 2.22 0.00 5.19
314 315 1.066587 GCATCCTAAGAGCGCGACT 59.933 57.895 12.10 6.51 0.00 4.18
315 316 0.311165 GCATCCTAAGAGCGCGACTA 59.689 55.000 12.10 0.00 0.00 2.59
316 317 1.664588 GCATCCTAAGAGCGCGACTAG 60.665 57.143 12.10 3.67 0.00 2.57
317 318 1.068885 CATCCTAAGAGCGCGACTAGG 60.069 57.143 12.10 19.70 0.00 3.02
318 319 1.008309 CCTAAGAGCGCGACTAGGC 60.008 63.158 12.10 0.00 0.00 3.93
319 320 1.008309 CTAAGAGCGCGACTAGGCC 60.008 63.158 12.10 0.00 0.00 5.19
320 321 2.718993 CTAAGAGCGCGACTAGGCCG 62.719 65.000 12.10 2.43 0.00 6.13
322 323 4.493747 GAGCGCGACTAGGCCGTT 62.494 66.667 12.10 2.37 0.00 4.44
323 324 3.984200 GAGCGCGACTAGGCCGTTT 62.984 63.158 12.10 0.00 0.00 3.60
324 325 3.116531 GCGCGACTAGGCCGTTTT 61.117 61.111 12.10 0.00 0.00 2.43
325 326 2.674084 GCGCGACTAGGCCGTTTTT 61.674 57.895 12.10 0.00 0.00 1.94
354 355 2.650778 GCCGAAAAAGTGGCCTGG 59.349 61.111 3.32 0.00 45.73 4.45
355 356 2.931068 GCCGAAAAAGTGGCCTGGG 61.931 63.158 3.32 0.00 45.73 4.45
356 357 2.275380 CCGAAAAAGTGGCCTGGGG 61.275 63.158 3.32 0.00 0.00 4.96
357 358 2.275380 CGAAAAAGTGGCCTGGGGG 61.275 63.158 3.32 0.00 0.00 5.40
391 392 1.453669 GGCTGGAGATGCCCTTAGG 59.546 63.158 0.00 0.00 44.32 2.69
392 393 1.348775 GGCTGGAGATGCCCTTAGGT 61.349 60.000 0.00 0.00 44.32 3.08
393 394 1.424638 GCTGGAGATGCCCTTAGGTA 58.575 55.000 0.00 0.00 34.97 3.08
394 395 1.346068 GCTGGAGATGCCCTTAGGTAG 59.654 57.143 0.00 0.00 34.97 3.18
395 396 2.964209 CTGGAGATGCCCTTAGGTAGA 58.036 52.381 0.00 0.00 34.97 2.59
396 397 2.896685 CTGGAGATGCCCTTAGGTAGAG 59.103 54.545 0.00 0.00 34.97 2.43
397 398 2.518407 TGGAGATGCCCTTAGGTAGAGA 59.482 50.000 0.00 0.00 34.97 3.10
398 399 3.052109 TGGAGATGCCCTTAGGTAGAGAA 60.052 47.826 0.00 0.00 34.97 2.87
399 400 3.576550 GGAGATGCCCTTAGGTAGAGAAG 59.423 52.174 0.00 0.00 34.57 2.85
400 401 2.969262 AGATGCCCTTAGGTAGAGAAGC 59.031 50.000 0.00 0.00 34.57 3.86
405 406 0.030908 CTTAGGTAGAGAAGCCGCGG 59.969 60.000 24.05 24.05 0.00 6.46
408 409 2.886124 GTAGAGAAGCCGCGGTGC 60.886 66.667 28.70 13.75 0.00 5.01
454 455 1.215382 CGTCCGTCCAGAGCATGAA 59.785 57.895 0.00 0.00 0.00 2.57
542 547 4.511826 ACTTTGATTGACGACCTTCTTCAC 59.488 41.667 0.00 0.00 0.00 3.18
549 564 2.296471 GACGACCTTCTTCACCAAGAGA 59.704 50.000 0.00 0.00 39.90 3.10
565 580 1.187087 GAGAGCTCCTCTTCCCGAAA 58.813 55.000 10.93 0.00 41.35 3.46
566 581 1.136110 GAGAGCTCCTCTTCCCGAAAG 59.864 57.143 10.93 0.00 41.35 2.62
567 582 1.187087 GAGCTCCTCTTCCCGAAAGA 58.813 55.000 0.87 0.00 41.81 2.52
570 585 2.696187 AGCTCCTCTTCCCGAAAGATAC 59.304 50.000 1.40 0.00 43.06 2.24
571 586 2.431057 GCTCCTCTTCCCGAAAGATACA 59.569 50.000 1.40 0.00 43.06 2.29
572 587 3.070302 GCTCCTCTTCCCGAAAGATACAT 59.930 47.826 1.40 0.00 43.06 2.29
577 596 6.070194 TCCTCTTCCCGAAAGATACATTTTCT 60.070 38.462 1.40 0.00 43.06 2.52
612 645 4.083855 CGCCCACTAAATATGCATGTAGTG 60.084 45.833 25.43 25.43 46.42 2.74
658 691 1.522580 GGAAGGAGGCTGCACGATC 60.523 63.158 9.23 0.74 0.00 3.69
671 704 0.040514 CACGATCAAGCCGCACAAAA 60.041 50.000 0.00 0.00 0.00 2.44
672 705 0.238289 ACGATCAAGCCGCACAAAAG 59.762 50.000 0.00 0.00 0.00 2.27
684 717 3.983344 CCGCACAAAAGAAAAAGGAGATG 59.017 43.478 0.00 0.00 0.00 2.90
692 725 2.907042 AGAAAAAGGAGATGGAGGTCGT 59.093 45.455 0.00 0.00 0.00 4.34
726 759 2.723746 GCGAAATGATGGCGCCAT 59.276 55.556 41.16 41.16 44.55 4.40
735 768 0.173481 GATGGCGCCATATCGAGCTA 59.827 55.000 40.56 10.47 36.70 3.32
736 769 0.108615 ATGGCGCCATATCGAGCTAC 60.109 55.000 39.91 1.74 34.49 3.58
737 770 1.446272 GGCGCCATATCGAGCTACC 60.446 63.158 24.80 0.00 0.00 3.18
741 774 0.905337 GCCATATCGAGCTACCCCCT 60.905 60.000 0.00 0.00 0.00 4.79
751 784 0.257905 GCTACCCCCTACCCTTTTGG 59.742 60.000 0.00 0.00 41.37 3.28
775 808 6.019559 GGAAGGAATTTTAGCGCAATTGATTC 60.020 38.462 11.47 11.99 0.00 2.52
813 846 0.318107 CGGCACCAGCAGAAAACAAG 60.318 55.000 0.00 0.00 44.61 3.16
814 847 0.032540 GGCACCAGCAGAAAACAAGG 59.967 55.000 0.00 0.00 44.61 3.61
816 849 1.408702 GCACCAGCAGAAAACAAGGAA 59.591 47.619 0.00 0.00 41.58 3.36
817 850 2.036346 GCACCAGCAGAAAACAAGGAAT 59.964 45.455 0.00 0.00 41.58 3.01
818 851 3.858503 GCACCAGCAGAAAACAAGGAATC 60.859 47.826 0.00 0.00 41.58 2.52
820 853 3.319122 ACCAGCAGAAAACAAGGAATCAC 59.681 43.478 0.00 0.00 0.00 3.06
821 854 3.305608 CCAGCAGAAAACAAGGAATCACC 60.306 47.826 0.00 0.00 39.35 4.02
822 855 2.554032 AGCAGAAAACAAGGAATCACCG 59.446 45.455 0.00 0.00 44.74 4.94
836 879 1.878953 TCACCGGAGAGAAAAGCAAC 58.121 50.000 9.46 0.00 0.00 4.17
847 890 3.477530 AGAAAAGCAACTAGTCCACACC 58.522 45.455 0.00 0.00 0.00 4.16
856 899 2.897969 ACTAGTCCACACCAAGATCGTT 59.102 45.455 0.00 0.00 0.00 3.85
866 912 3.005554 ACCAAGATCGTTGCTGATTGAG 58.994 45.455 0.00 0.00 0.00 3.02
902 954 7.617723 ACCATGCTACCAAAATTAACCTATGAA 59.382 33.333 0.00 0.00 0.00 2.57
903 955 8.641541 CCATGCTACCAAAATTAACCTATGAAT 58.358 33.333 0.00 0.00 0.00 2.57
920 972 0.759346 AATATGCCCTGTCTCCGTCC 59.241 55.000 0.00 0.00 0.00 4.79
930 982 0.390472 GTCTCCGTCCCTCTGCTTTG 60.390 60.000 0.00 0.00 0.00 2.77
933 985 2.328099 CCGTCCCTCTGCTTTGTGC 61.328 63.158 0.00 0.00 43.25 4.57
937 989 0.250901 TCCCTCTGCTTTGTGCCTTC 60.251 55.000 0.00 0.00 42.00 3.46
940 992 1.613836 CTCTGCTTTGTGCCTTCCTT 58.386 50.000 0.00 0.00 42.00 3.36
942 994 1.682854 TCTGCTTTGTGCCTTCCTTTG 59.317 47.619 0.00 0.00 42.00 2.77
943 995 0.104671 TGCTTTGTGCCTTCCTTTGC 59.895 50.000 0.00 0.00 42.00 3.68
944 996 0.390492 GCTTTGTGCCTTCCTTTGCT 59.610 50.000 0.00 0.00 35.15 3.91
945 997 1.202568 GCTTTGTGCCTTCCTTTGCTT 60.203 47.619 0.00 0.00 35.15 3.91
946 998 2.742856 GCTTTGTGCCTTCCTTTGCTTT 60.743 45.455 0.00 0.00 35.15 3.51
947 999 2.600470 TTGTGCCTTCCTTTGCTTTG 57.400 45.000 0.00 0.00 0.00 2.77
948 1000 0.104671 TGTGCCTTCCTTTGCTTTGC 59.895 50.000 0.00 0.00 0.00 3.68
949 1001 0.390492 GTGCCTTCCTTTGCTTTGCT 59.610 50.000 0.00 0.00 0.00 3.91
950 1002 1.122227 TGCCTTCCTTTGCTTTGCTT 58.878 45.000 0.00 0.00 0.00 3.91
951 1003 1.485895 TGCCTTCCTTTGCTTTGCTTT 59.514 42.857 0.00 0.00 0.00 3.51
952 1004 1.869132 GCCTTCCTTTGCTTTGCTTTG 59.131 47.619 0.00 0.00 0.00 2.77
953 1005 2.742856 GCCTTCCTTTGCTTTGCTTTGT 60.743 45.455 0.00 0.00 0.00 2.83
954 1006 2.867975 CCTTCCTTTGCTTTGCTTTGTG 59.132 45.455 0.00 0.00 0.00 3.33
955 1007 1.938625 TCCTTTGCTTTGCTTTGTGC 58.061 45.000 0.00 0.00 43.25 4.57
956 1008 1.481772 TCCTTTGCTTTGCTTTGTGCT 59.518 42.857 0.00 0.00 43.37 4.40
959 1011 1.558741 TTGCTTTGCTTTGTGCTTCG 58.441 45.000 0.00 0.00 43.37 3.79
960 1012 0.871163 TGCTTTGCTTTGTGCTTCGC 60.871 50.000 0.00 0.00 43.37 4.70
979 1039 1.954651 GGCTATAAGACACGCCGGC 60.955 63.158 19.07 19.07 32.22 6.13
992 1052 3.814268 CCGGCCCAAGAACGCATG 61.814 66.667 0.00 0.00 0.00 4.06
993 1053 4.481112 CGGCCCAAGAACGCATGC 62.481 66.667 7.91 7.91 0.00 4.06
994 1054 3.372730 GGCCCAAGAACGCATGCA 61.373 61.111 19.57 0.00 0.00 3.96
995 1055 2.650196 GCCCAAGAACGCATGCAA 59.350 55.556 19.57 0.00 0.00 4.08
996 1056 1.734117 GCCCAAGAACGCATGCAAC 60.734 57.895 19.57 8.05 0.00 4.17
997 1057 1.659233 CCCAAGAACGCATGCAACA 59.341 52.632 19.57 0.00 0.00 3.33
998 1058 0.664166 CCCAAGAACGCATGCAACAC 60.664 55.000 19.57 5.80 0.00 3.32
1000 1060 0.030504 CAAGAACGCATGCAACACCA 59.969 50.000 19.57 0.00 0.00 4.17
1001 1061 0.030638 AAGAACGCATGCAACACCAC 59.969 50.000 19.57 1.44 0.00 4.16
1002 1062 0.819259 AGAACGCATGCAACACCACT 60.819 50.000 19.57 3.79 0.00 4.00
1022 1121 3.586618 ACTCTGCATCTTTCTTCCTCCTT 59.413 43.478 0.00 0.00 0.00 3.36
1045 1144 4.887655 TGTCTTCGTATCAATCTCCAGCTA 59.112 41.667 0.00 0.00 0.00 3.32
1046 1145 5.359860 TGTCTTCGTATCAATCTCCAGCTAA 59.640 40.000 0.00 0.00 0.00 3.09
1190 1319 1.541168 AACCCCTCCTCCTCCTCCAT 61.541 60.000 0.00 0.00 0.00 3.41
1223 1378 1.991121 AAGTGACCAGTCTCGTACCA 58.009 50.000 0.00 0.00 0.00 3.25
1224 1379 1.245732 AGTGACCAGTCTCGTACCAC 58.754 55.000 0.00 0.00 0.00 4.16
1291 1454 0.879400 AGCAGCAGCACATCTATCGC 60.879 55.000 3.17 0.00 45.49 4.58
1292 1455 0.879400 GCAGCAGCACATCTATCGCT 60.879 55.000 0.00 0.00 41.58 4.93
1296 1459 1.070445 AGCACATCTATCGCTGGCC 59.930 57.895 0.00 0.00 33.91 5.36
1297 1460 1.963338 GCACATCTATCGCTGGCCC 60.963 63.158 0.00 0.00 0.00 5.80
1298 1461 1.447217 CACATCTATCGCTGGCCCA 59.553 57.895 0.00 0.00 0.00 5.36
1299 1462 0.035881 CACATCTATCGCTGGCCCAT 59.964 55.000 0.00 0.00 0.00 4.00
1300 1463 0.767375 ACATCTATCGCTGGCCCATT 59.233 50.000 0.00 0.00 0.00 3.16
1301 1464 1.143684 ACATCTATCGCTGGCCCATTT 59.856 47.619 0.00 0.00 0.00 2.32
1302 1465 1.808945 CATCTATCGCTGGCCCATTTC 59.191 52.381 0.00 0.00 0.00 2.17
1303 1466 0.836606 TCTATCGCTGGCCCATTTCA 59.163 50.000 0.00 0.00 0.00 2.69
1306 1469 0.748450 ATCGCTGGCCCATTTCATTG 59.252 50.000 0.00 0.00 0.00 2.82
1358 1521 2.268920 GGCGGTGATGAGAAGGCA 59.731 61.111 0.00 0.00 0.00 4.75
1376 1557 1.438651 CAAAAGAAGGGATCGTCGCA 58.561 50.000 5.23 0.00 0.00 5.10
1562 1776 3.077556 ATGGTCGGCGCCTTCTCT 61.078 61.111 26.68 3.04 0.00 3.10
1563 1777 3.376935 ATGGTCGGCGCCTTCTCTG 62.377 63.158 26.68 7.77 0.00 3.35
1633 1847 3.964875 CGCAACCACCACCTGCAC 61.965 66.667 0.00 0.00 35.78 4.57
1644 1858 0.962356 CACCTGCACCAACTGATCCC 60.962 60.000 0.00 0.00 0.00 3.85
1659 1877 3.743521 TGATCCCTAATTCTCCATTGCG 58.256 45.455 0.00 0.00 0.00 4.85
1661 1879 3.194005 TCCCTAATTCTCCATTGCGTC 57.806 47.619 0.00 0.00 0.00 5.19
1662 1880 2.503765 TCCCTAATTCTCCATTGCGTCA 59.496 45.455 0.00 0.00 0.00 4.35
1663 1881 3.136443 TCCCTAATTCTCCATTGCGTCAT 59.864 43.478 0.00 0.00 0.00 3.06
1664 1882 4.346709 TCCCTAATTCTCCATTGCGTCATA 59.653 41.667 0.00 0.00 0.00 2.15
1666 1884 4.692625 CCTAATTCTCCATTGCGTCATAGG 59.307 45.833 0.00 0.00 0.00 2.57
1667 1885 4.422073 AATTCTCCATTGCGTCATAGGA 57.578 40.909 0.00 0.00 0.00 2.94
1668 1886 3.459232 TTCTCCATTGCGTCATAGGAG 57.541 47.619 15.47 15.47 45.64 3.69
1674 1936 1.847328 TTGCGTCATAGGAGACCTCA 58.153 50.000 0.00 0.00 34.61 3.86
1680 1942 3.027412 GTCATAGGAGACCTCAAGCTCA 58.973 50.000 0.00 0.00 34.61 4.26
1732 2000 3.419264 TTACATGAATGAATGGCGCAC 57.581 42.857 10.83 0.00 31.46 5.34
1735 2003 1.948834 CATGAATGAATGGCGCACCTA 59.051 47.619 10.83 0.00 36.63 3.08
1739 2007 3.202906 GAATGAATGGCGCACCTACTAA 58.797 45.455 10.83 0.00 36.63 2.24
1768 2036 2.104111 CCTCACCCGGATTGCAAGTATA 59.896 50.000 0.73 0.00 0.00 1.47
1834 2118 0.388649 ACGAGTGGCTGTTCGATGAC 60.389 55.000 11.57 0.00 39.93 3.06
1841 2125 1.281899 GCTGTTCGATGACTGTAGGC 58.718 55.000 0.00 0.00 0.00 3.93
1842 2126 1.404181 GCTGTTCGATGACTGTAGGCA 60.404 52.381 0.00 0.00 0.00 4.75
1843 2127 2.739932 GCTGTTCGATGACTGTAGGCAT 60.740 50.000 0.00 0.00 0.00 4.40
1844 2128 3.490933 GCTGTTCGATGACTGTAGGCATA 60.491 47.826 0.00 0.00 0.00 3.14
1845 2129 4.294232 CTGTTCGATGACTGTAGGCATAG 58.706 47.826 0.00 0.60 0.00 2.23
1846 2130 3.699538 TGTTCGATGACTGTAGGCATAGT 59.300 43.478 0.00 0.00 0.00 2.12
1847 2131 4.885325 TGTTCGATGACTGTAGGCATAGTA 59.115 41.667 0.00 0.00 0.00 1.82
1848 2132 5.213675 GTTCGATGACTGTAGGCATAGTAC 58.786 45.833 0.00 1.31 0.00 2.73
1878 2162 1.134159 CAGAGAAGCCCAAGATGGAGG 60.134 57.143 0.00 0.00 40.96 4.30
1879 2163 1.207791 GAGAAGCCCAAGATGGAGGA 58.792 55.000 0.00 0.00 40.96 3.71
1881 2165 1.207791 GAAGCCCAAGATGGAGGAGA 58.792 55.000 0.00 0.00 40.96 3.71
1882 2166 0.915364 AAGCCCAAGATGGAGGAGAC 59.085 55.000 0.00 0.00 40.96 3.36
1883 2167 0.252881 AGCCCAAGATGGAGGAGACA 60.253 55.000 0.00 0.00 40.96 3.41
1884 2168 0.107459 GCCCAAGATGGAGGAGACAC 60.107 60.000 0.00 0.00 40.96 3.67
1885 2169 0.176680 CCCAAGATGGAGGAGACACG 59.823 60.000 0.00 0.00 40.96 4.49
1886 2170 0.176680 CCAAGATGGAGGAGACACGG 59.823 60.000 0.00 0.00 40.96 4.94
1887 2171 1.186200 CAAGATGGAGGAGACACGGA 58.814 55.000 0.00 0.00 0.00 4.69
1888 2172 1.135915 CAAGATGGAGGAGACACGGAG 59.864 57.143 0.00 0.00 0.00 4.63
1889 2173 0.396417 AGATGGAGGAGACACGGAGG 60.396 60.000 0.00 0.00 0.00 4.30
1890 2174 2.022240 GATGGAGGAGACACGGAGGC 62.022 65.000 0.00 0.00 0.00 4.70
1891 2175 3.462678 GGAGGAGACACGGAGGCC 61.463 72.222 0.00 0.00 0.00 5.19
1912 2196 4.496429 ACGGAGTGGACGAGACTT 57.504 55.556 0.00 0.00 42.51 3.01
1913 2197 1.957562 ACGGAGTGGACGAGACTTG 59.042 57.895 0.00 0.00 42.51 3.16
1914 2198 1.444553 CGGAGTGGACGAGACTTGC 60.445 63.158 0.00 0.00 0.00 4.01
1915 2199 1.079750 GGAGTGGACGAGACTTGCC 60.080 63.158 0.00 0.00 0.00 4.52
1916 2200 1.666011 GAGTGGACGAGACTTGCCA 59.334 57.895 0.00 2.67 0.00 4.92
1917 2201 0.389166 GAGTGGACGAGACTTGCCAG 60.389 60.000 6.21 0.00 0.00 4.85
1918 2202 2.029844 GTGGACGAGACTTGCCAGC 61.030 63.158 6.21 0.00 0.00 4.85
1919 2203 2.210013 TGGACGAGACTTGCCAGCT 61.210 57.895 0.00 0.00 0.00 4.24
1920 2204 1.446966 GGACGAGACTTGCCAGCTC 60.447 63.158 0.00 0.00 0.00 4.09
1921 2205 1.446966 GACGAGACTTGCCAGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
1922 2206 2.125350 CGAGACTTGCCAGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
1923 2207 2.270527 GAGACTTGCCAGCTCCCC 59.729 66.667 0.00 0.00 0.00 4.81
1924 2208 2.204059 AGACTTGCCAGCTCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
1925 2209 2.250741 GAGACTTGCCAGCTCCCCTC 62.251 65.000 0.00 0.00 0.00 4.30
1926 2210 2.204059 ACTTGCCAGCTCCCCTCT 60.204 61.111 0.00 0.00 0.00 3.69
1927 2211 2.250741 GACTTGCCAGCTCCCCTCTC 62.251 65.000 0.00 0.00 0.00 3.20
1928 2212 3.382803 CTTGCCAGCTCCCCTCTCG 62.383 68.421 0.00 0.00 0.00 4.04
1929 2213 4.704103 TGCCAGCTCCCCTCTCGT 62.704 66.667 0.00 0.00 0.00 4.18
1930 2214 4.154347 GCCAGCTCCCCTCTCGTG 62.154 72.222 0.00 0.00 0.00 4.35
1931 2215 2.681778 CCAGCTCCCCTCTCGTGT 60.682 66.667 0.00 0.00 0.00 4.49
1932 2216 2.575993 CAGCTCCCCTCTCGTGTG 59.424 66.667 0.00 0.00 0.00 3.82
1933 2217 2.118513 AGCTCCCCTCTCGTGTGT 59.881 61.111 0.00 0.00 0.00 3.72
1934 2218 1.979693 AGCTCCCCTCTCGTGTGTC 60.980 63.158 0.00 0.00 0.00 3.67
1935 2219 3.007973 GCTCCCCTCTCGTGTGTCC 62.008 68.421 0.00 0.00 0.00 4.02
1936 2220 1.606601 CTCCCCTCTCGTGTGTCCA 60.607 63.158 0.00 0.00 0.00 4.02
1937 2221 0.972983 CTCCCCTCTCGTGTGTCCAT 60.973 60.000 0.00 0.00 0.00 3.41
1938 2222 0.970937 TCCCCTCTCGTGTGTCCATC 60.971 60.000 0.00 0.00 0.00 3.51
1939 2223 1.517832 CCCTCTCGTGTGTCCATCC 59.482 63.158 0.00 0.00 0.00 3.51
1940 2224 1.139734 CCTCTCGTGTGTCCATCCG 59.860 63.158 0.00 0.00 0.00 4.18
1941 2225 1.595993 CCTCTCGTGTGTCCATCCGT 61.596 60.000 0.00 0.00 0.00 4.69
1942 2226 1.092348 CTCTCGTGTGTCCATCCGTA 58.908 55.000 0.00 0.00 0.00 4.02
1943 2227 0.806868 TCTCGTGTGTCCATCCGTAC 59.193 55.000 0.00 0.00 0.00 3.67
1944 2228 0.809385 CTCGTGTGTCCATCCGTACT 59.191 55.000 0.00 0.00 0.00 2.73
1945 2229 0.806868 TCGTGTGTCCATCCGTACTC 59.193 55.000 0.00 0.00 0.00 2.59
1946 2230 0.179145 CGTGTGTCCATCCGTACTCC 60.179 60.000 0.00 0.00 0.00 3.85
1947 2231 0.175073 GTGTGTCCATCCGTACTCCC 59.825 60.000 0.00 0.00 0.00 4.30
1948 2232 1.317431 TGTGTCCATCCGTACTCCCG 61.317 60.000 0.00 0.00 0.00 5.14
1969 2253 4.900635 GGATACGTGGCTTGATTTGATT 57.099 40.909 0.00 0.00 0.00 2.57
1970 2254 4.601019 GGATACGTGGCTTGATTTGATTG 58.399 43.478 0.00 0.00 0.00 2.67
1971 2255 4.498009 GGATACGTGGCTTGATTTGATTGG 60.498 45.833 0.00 0.00 0.00 3.16
1972 2256 2.513753 ACGTGGCTTGATTTGATTGGA 58.486 42.857 0.00 0.00 0.00 3.53
1973 2257 2.890311 ACGTGGCTTGATTTGATTGGAA 59.110 40.909 0.00 0.00 0.00 3.53
1974 2258 3.244976 CGTGGCTTGATTTGATTGGAAC 58.755 45.455 0.00 0.00 0.00 3.62
1975 2259 3.305267 CGTGGCTTGATTTGATTGGAACA 60.305 43.478 0.00 0.00 0.00 3.18
1989 2273 2.164338 TGGAACAAAATAAGACCCGGC 58.836 47.619 0.00 0.00 31.92 6.13
1990 2274 1.475280 GGAACAAAATAAGACCCGGCC 59.525 52.381 0.00 0.00 0.00 6.13
1991 2275 1.475280 GAACAAAATAAGACCCGGCCC 59.525 52.381 0.00 0.00 0.00 5.80
1992 2276 0.323999 ACAAAATAAGACCCGGCCCC 60.324 55.000 0.00 0.00 0.00 5.80
1993 2277 0.323908 CAAAATAAGACCCGGCCCCA 60.324 55.000 0.00 0.00 0.00 4.96
1994 2278 0.323999 AAAATAAGACCCGGCCCCAC 60.324 55.000 0.00 0.00 0.00 4.61
1995 2279 2.219449 AAATAAGACCCGGCCCCACC 62.219 60.000 0.00 0.00 0.00 4.61
1996 2280 3.653122 ATAAGACCCGGCCCCACCT 62.653 63.158 0.00 0.00 35.61 4.00
2002 2286 3.012722 CCGGCCCCACCTCCTTAA 61.013 66.667 0.00 0.00 35.61 1.85
2003 2287 2.608550 CCGGCCCCACCTCCTTAAA 61.609 63.158 0.00 0.00 35.61 1.52
2004 2288 1.381076 CGGCCCCACCTCCTTAAAA 59.619 57.895 0.00 0.00 35.61 1.52
2005 2289 0.033503 CGGCCCCACCTCCTTAAAAT 60.034 55.000 0.00 0.00 35.61 1.82
2006 2290 1.776662 GGCCCCACCTCCTTAAAATC 58.223 55.000 0.00 0.00 34.51 2.17
2007 2291 1.288037 GGCCCCACCTCCTTAAAATCT 59.712 52.381 0.00 0.00 34.51 2.40
2008 2292 2.379005 GCCCCACCTCCTTAAAATCTG 58.621 52.381 0.00 0.00 0.00 2.90
2009 2293 2.950418 GCCCCACCTCCTTAAAATCTGG 60.950 54.545 0.00 0.00 0.00 3.86
2010 2294 2.358195 CCCCACCTCCTTAAAATCTGGG 60.358 54.545 0.00 0.00 37.24 4.45
2011 2295 2.358195 CCCACCTCCTTAAAATCTGGGG 60.358 54.545 0.00 0.00 34.30 4.96
2012 2296 2.358195 CCACCTCCTTAAAATCTGGGGG 60.358 54.545 0.00 0.00 46.69 5.40
2033 2317 7.767250 GGGGGAAATGATTAGATTAGAAAGG 57.233 40.000 0.00 0.00 0.00 3.11
2034 2318 7.526918 GGGGGAAATGATTAGATTAGAAAGGA 58.473 38.462 0.00 0.00 0.00 3.36
2035 2319 8.004801 GGGGGAAATGATTAGATTAGAAAGGAA 58.995 37.037 0.00 0.00 0.00 3.36
2036 2320 9.421399 GGGGAAATGATTAGATTAGAAAGGAAA 57.579 33.333 0.00 0.00 0.00 3.13
2062 2346 2.270352 AAAAGACAGCCGTTGGATGA 57.730 45.000 8.26 0.00 42.34 2.92
2063 2347 1.813513 AAAGACAGCCGTTGGATGAG 58.186 50.000 8.26 0.00 42.34 2.90
2064 2348 0.036010 AAGACAGCCGTTGGATGAGG 60.036 55.000 8.26 0.00 42.34 3.86
2065 2349 1.194781 AGACAGCCGTTGGATGAGGT 61.195 55.000 8.26 0.00 42.34 3.85
2066 2350 1.003355 ACAGCCGTTGGATGAGGTG 60.003 57.895 8.26 0.00 42.34 4.00
2067 2351 1.746615 CAGCCGTTGGATGAGGTGG 60.747 63.158 0.00 0.00 42.34 4.61
2068 2352 2.438434 GCCGTTGGATGAGGTGGG 60.438 66.667 0.00 0.00 0.00 4.61
2069 2353 2.966732 GCCGTTGGATGAGGTGGGA 61.967 63.158 0.00 0.00 0.00 4.37
2070 2354 1.221840 CCGTTGGATGAGGTGGGAG 59.778 63.158 0.00 0.00 0.00 4.30
2071 2355 1.450312 CGTTGGATGAGGTGGGAGC 60.450 63.158 0.00 0.00 0.00 4.70
2072 2356 1.685224 GTTGGATGAGGTGGGAGCA 59.315 57.895 0.00 0.00 0.00 4.26
2073 2357 0.678048 GTTGGATGAGGTGGGAGCAC 60.678 60.000 0.00 0.00 0.00 4.40
2074 2358 2.184020 TTGGATGAGGTGGGAGCACG 62.184 60.000 0.00 0.00 0.00 5.34
2075 2359 2.187946 GATGAGGTGGGAGCACGG 59.812 66.667 0.00 0.00 0.00 4.94
2076 2360 2.284625 ATGAGGTGGGAGCACGGA 60.285 61.111 0.00 0.00 0.00 4.69
2077 2361 1.690219 GATGAGGTGGGAGCACGGAT 61.690 60.000 0.00 0.00 0.00 4.18
2078 2362 0.398522 ATGAGGTGGGAGCACGGATA 60.399 55.000 0.00 0.00 0.00 2.59
2079 2363 1.043116 TGAGGTGGGAGCACGGATAG 61.043 60.000 0.00 0.00 0.00 2.08
2080 2364 1.749334 GAGGTGGGAGCACGGATAGG 61.749 65.000 0.00 0.00 0.00 2.57
2081 2365 1.760875 GGTGGGAGCACGGATAGGA 60.761 63.158 0.00 0.00 0.00 2.94
2082 2366 1.742768 GTGGGAGCACGGATAGGAG 59.257 63.158 0.00 0.00 0.00 3.69
2083 2367 1.043673 GTGGGAGCACGGATAGGAGT 61.044 60.000 0.00 0.00 0.00 3.85
2084 2368 0.554305 TGGGAGCACGGATAGGAGTA 59.446 55.000 0.00 0.00 0.00 2.59
2085 2369 1.147191 TGGGAGCACGGATAGGAGTAT 59.853 52.381 0.00 0.00 0.00 2.12
2086 2370 1.546476 GGGAGCACGGATAGGAGTATG 59.454 57.143 0.00 0.00 0.00 2.39
2087 2371 2.515854 GGAGCACGGATAGGAGTATGA 58.484 52.381 0.00 0.00 0.00 2.15
2088 2372 2.490115 GGAGCACGGATAGGAGTATGAG 59.510 54.545 0.00 0.00 0.00 2.90
2089 2373 3.413327 GAGCACGGATAGGAGTATGAGA 58.587 50.000 0.00 0.00 0.00 3.27
2090 2374 3.821600 GAGCACGGATAGGAGTATGAGAA 59.178 47.826 0.00 0.00 0.00 2.87
2091 2375 3.823873 AGCACGGATAGGAGTATGAGAAG 59.176 47.826 0.00 0.00 0.00 2.85
2092 2376 3.057174 GCACGGATAGGAGTATGAGAAGG 60.057 52.174 0.00 0.00 0.00 3.46
2093 2377 3.508012 CACGGATAGGAGTATGAGAAGGG 59.492 52.174 0.00 0.00 0.00 3.95
2094 2378 3.398292 ACGGATAGGAGTATGAGAAGGGA 59.602 47.826 0.00 0.00 0.00 4.20
2095 2379 4.013728 CGGATAGGAGTATGAGAAGGGAG 58.986 52.174 0.00 0.00 0.00 4.30
2096 2380 3.767131 GGATAGGAGTATGAGAAGGGAGC 59.233 52.174 0.00 0.00 0.00 4.70
2097 2381 2.856760 AGGAGTATGAGAAGGGAGCA 57.143 50.000 0.00 0.00 0.00 4.26
2098 2382 2.676748 AGGAGTATGAGAAGGGAGCAG 58.323 52.381 0.00 0.00 0.00 4.24
2099 2383 1.691434 GGAGTATGAGAAGGGAGCAGG 59.309 57.143 0.00 0.00 0.00 4.85
2100 2384 1.069978 GAGTATGAGAAGGGAGCAGGC 59.930 57.143 0.00 0.00 0.00 4.85
2101 2385 0.833287 GTATGAGAAGGGAGCAGGCA 59.167 55.000 0.00 0.00 0.00 4.75
2102 2386 1.210478 GTATGAGAAGGGAGCAGGCAA 59.790 52.381 0.00 0.00 0.00 4.52
2103 2387 0.255318 ATGAGAAGGGAGCAGGCAAG 59.745 55.000 0.00 0.00 0.00 4.01
2104 2388 1.748500 GAGAAGGGAGCAGGCAAGC 60.749 63.158 0.00 0.00 0.00 4.01
2105 2389 2.753446 GAAGGGAGCAGGCAAGCC 60.753 66.667 2.02 2.02 34.23 4.35
2106 2390 4.729918 AAGGGAGCAGGCAAGCCG 62.730 66.667 5.28 2.12 41.95 5.52
2109 2393 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
2110 2394 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
2111 2395 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
2161 2445 4.129737 ACCCGGCTGACGTCATCG 62.130 66.667 20.40 23.31 42.24 3.84
2167 2451 1.875813 GCTGACGTCATCGCTCTGG 60.876 63.158 20.40 5.73 41.18 3.86
2168 2452 1.508545 CTGACGTCATCGCTCTGGT 59.491 57.895 20.40 0.00 41.18 4.00
2169 2453 0.524392 CTGACGTCATCGCTCTGGTC 60.524 60.000 20.40 0.00 41.18 4.02
2170 2454 1.226717 GACGTCATCGCTCTGGTCC 60.227 63.158 11.55 0.00 41.18 4.46
2175 2459 0.176449 TCATCGCTCTGGTCCATGTG 59.824 55.000 0.00 0.00 0.00 3.21
2193 2477 4.819105 TGTGGTTCCTTTCTGATACGAT 57.181 40.909 0.00 0.00 0.00 3.73
2197 2481 3.557595 GGTTCCTTTCTGATACGATGCTG 59.442 47.826 0.00 0.00 0.00 4.41
2201 2485 2.515926 TTCTGATACGATGCTGCCTC 57.484 50.000 0.00 0.00 0.00 4.70
2202 2486 0.312102 TCTGATACGATGCTGCCTCG 59.688 55.000 22.62 22.62 41.77 4.63
2208 2492 2.894387 GATGCTGCCTCGTGGAGC 60.894 66.667 7.92 13.26 37.17 4.70
2210 2494 3.040206 ATGCTGCCTCGTGGAGCAT 62.040 57.895 24.88 24.88 44.27 3.79
2234 2518 1.753956 CGCACCAAGTTTGCAACTAC 58.246 50.000 0.00 0.00 41.91 2.73
2235 2519 1.599419 CGCACCAAGTTTGCAACTACC 60.599 52.381 0.00 0.00 41.91 3.18
2236 2520 1.269569 GCACCAAGTTTGCAACTACCC 60.270 52.381 0.00 0.00 41.91 3.69
2237 2521 1.339929 CACCAAGTTTGCAACTACCCC 59.660 52.381 0.00 0.00 41.91 4.95
2238 2522 0.966179 CCAAGTTTGCAACTACCCCC 59.034 55.000 0.00 0.00 41.91 5.40
2239 2523 1.480498 CCAAGTTTGCAACTACCCCCT 60.480 52.381 0.00 0.00 41.91 4.79
2240 2524 2.224917 CCAAGTTTGCAACTACCCCCTA 60.225 50.000 0.00 0.00 41.91 3.53
2250 2534 4.031611 CAACTACCCCCTAGCTAGTTTCT 58.968 47.826 19.31 2.20 29.94 2.52
2251 2535 4.349564 ACTACCCCCTAGCTAGTTTCTT 57.650 45.455 19.31 2.64 0.00 2.52
2260 2544 3.685139 AGCTAGTTTCTTAGCACTGCA 57.315 42.857 3.30 0.00 46.69 4.41
2272 2556 2.755650 AGCACTGCACTGTGTAGTTAC 58.244 47.619 25.70 20.41 40.41 2.50
2279 2563 3.386726 TGCACTGTGTAGTTACCTTGACT 59.613 43.478 9.86 0.00 34.07 3.41
2320 2655 6.459923 ACTCTTCTTTTAGTAGTTGCTGAGG 58.540 40.000 0.00 0.00 0.00 3.86
2376 2711 0.529992 GCCAGCACGGTATGAGGTAC 60.530 60.000 0.00 0.00 36.97 3.34
2415 2750 3.565307 TGGCTTCCAAACTGTTGAGAAT 58.435 40.909 0.00 0.00 36.83 2.40
2416 2751 3.318839 TGGCTTCCAAACTGTTGAGAATG 59.681 43.478 0.00 0.00 36.83 2.67
2425 2760 2.308570 ACTGTTGAGAATGGGCATGGTA 59.691 45.455 0.00 0.00 0.00 3.25
2446 2781 6.469139 GTAGTTTTCTACTTTGGTCAGCTC 57.531 41.667 0.00 0.00 46.53 4.09
2447 2782 5.297569 AGTTTTCTACTTTGGTCAGCTCT 57.702 39.130 0.00 0.00 31.29 4.09
2482 2818 5.854157 AGCGATGTTAAAATTACTGTCACG 58.146 37.500 0.00 0.00 0.00 4.35
2496 2832 3.126343 ACTGTCACGTTTTTCAGGTTGTC 59.874 43.478 9.65 0.00 32.92 3.18
2503 2839 1.028905 TTTTCAGGTTGTCGCCCAAG 58.971 50.000 0.00 0.00 32.51 3.61
2513 2849 1.070786 TCGCCCAAGACTTGTGGAC 59.929 57.895 20.62 13.16 38.54 4.02
2516 2852 1.620822 GCCCAAGACTTGTGGACAAT 58.379 50.000 20.62 0.00 38.54 2.71
2517 2853 1.541588 GCCCAAGACTTGTGGACAATC 59.458 52.381 20.62 4.92 38.54 2.67
2518 2854 2.815589 GCCCAAGACTTGTGGACAATCT 60.816 50.000 20.62 0.00 38.54 2.40
2519 2855 3.077359 CCCAAGACTTGTGGACAATCTC 58.923 50.000 14.03 0.00 38.54 2.75
2520 2856 3.496692 CCCAAGACTTGTGGACAATCTCA 60.497 47.826 14.03 0.00 38.54 3.27
2521 2857 4.330250 CCAAGACTTGTGGACAATCTCAT 58.670 43.478 14.03 0.00 38.54 2.90
2522 2858 5.491070 CCAAGACTTGTGGACAATCTCATA 58.509 41.667 14.03 0.00 38.54 2.15
2523 2859 6.118170 CCAAGACTTGTGGACAATCTCATAT 58.882 40.000 14.03 0.00 38.54 1.78
2524 2860 7.275183 CCAAGACTTGTGGACAATCTCATATA 58.725 38.462 14.03 0.00 38.54 0.86
2525 2861 7.935755 CCAAGACTTGTGGACAATCTCATATAT 59.064 37.037 14.03 0.00 38.54 0.86
2545 2881 9.130661 CATATATTTTGATTGGGTGACAGGTTA 57.869 33.333 0.00 0.00 0.00 2.85
2548 2884 6.827586 TTTTGATTGGGTGACAGGTTATAC 57.172 37.500 0.00 0.00 0.00 1.47
2602 2950 5.068987 AGCTAAAGAAAACATGAACTTGGCA 59.931 36.000 0.00 0.00 0.00 4.92
2616 2964 5.596361 TGAACTTGGCAAGAAATTGGAGTAA 59.404 36.000 32.50 0.00 0.00 2.24
2623 2971 8.415950 TGGCAAGAAATTGGAGTAAAATAAGA 57.584 30.769 0.00 0.00 0.00 2.10
2624 2972 8.303876 TGGCAAGAAATTGGAGTAAAATAAGAC 58.696 33.333 0.00 0.00 0.00 3.01
2644 2992 1.438651 GAGCTATTGTGCCGTTGACA 58.561 50.000 0.00 0.00 0.00 3.58
2645 2993 1.804151 GAGCTATTGTGCCGTTGACAA 59.196 47.619 0.00 0.00 37.70 3.18
2657 3005 2.360801 CCGTTGACAAGTGGGAAACATT 59.639 45.455 0.00 0.00 0.00 2.71
2658 3006 3.550030 CCGTTGACAAGTGGGAAACATTC 60.550 47.826 0.00 0.00 0.00 2.67
2659 3007 3.315191 CGTTGACAAGTGGGAAACATTCT 59.685 43.478 0.00 0.00 0.00 2.40
2668 3016 5.178797 AGTGGGAAACATTCTATCGTCAAG 58.821 41.667 0.00 0.00 0.00 3.02
2674 3022 5.490139 AACATTCTATCGTCAAGCAATGG 57.510 39.130 0.00 0.00 0.00 3.16
2680 3028 0.608856 TCGTCAAGCAATGGCCATGT 60.609 50.000 21.63 6.81 42.56 3.21
2684 3032 1.478916 TCAAGCAATGGCCATGTGATG 59.521 47.619 21.63 15.09 42.56 3.07
2685 3033 1.206132 CAAGCAATGGCCATGTGATGT 59.794 47.619 21.63 0.00 42.56 3.06
2686 3034 0.821517 AGCAATGGCCATGTGATGTG 59.178 50.000 21.63 13.88 42.56 3.21
2687 3035 0.818938 GCAATGGCCATGTGATGTGA 59.181 50.000 21.63 0.00 0.00 3.58
2688 3036 1.411246 GCAATGGCCATGTGATGTGAT 59.589 47.619 21.63 0.00 0.00 3.06
2689 3037 2.159014 GCAATGGCCATGTGATGTGATT 60.159 45.455 21.63 0.00 0.00 2.57
2690 3038 3.680475 GCAATGGCCATGTGATGTGATTT 60.680 43.478 21.63 0.00 0.00 2.17
2691 3039 4.441773 GCAATGGCCATGTGATGTGATTTA 60.442 41.667 21.63 0.00 0.00 1.40
2692 3040 5.286438 CAATGGCCATGTGATGTGATTTAG 58.714 41.667 21.63 0.00 0.00 1.85
2693 3041 3.289836 TGGCCATGTGATGTGATTTAGG 58.710 45.455 0.00 0.00 0.00 2.69
2694 3042 2.035066 GGCCATGTGATGTGATTTAGGC 59.965 50.000 0.00 0.00 38.84 3.93
2695 3043 2.035066 GCCATGTGATGTGATTTAGGCC 59.965 50.000 0.00 0.00 33.68 5.19
2696 3044 2.624838 CCATGTGATGTGATTTAGGCCC 59.375 50.000 0.00 0.00 0.00 5.80
2697 3045 3.559069 CATGTGATGTGATTTAGGCCCT 58.441 45.455 0.00 0.00 0.00 5.19
2698 3046 3.003394 TGTGATGTGATTTAGGCCCTG 57.997 47.619 0.00 0.00 0.00 4.45
2699 3047 2.308570 TGTGATGTGATTTAGGCCCTGT 59.691 45.455 0.00 0.00 0.00 4.00
2700 3048 3.245229 TGTGATGTGATTTAGGCCCTGTT 60.245 43.478 0.00 0.00 0.00 3.16
2701 3049 3.378427 GTGATGTGATTTAGGCCCTGTTC 59.622 47.826 0.00 0.00 0.00 3.18
2702 3050 2.107950 TGTGATTTAGGCCCTGTTCG 57.892 50.000 0.00 0.00 0.00 3.95
2703 3051 1.339631 TGTGATTTAGGCCCTGTTCGG 60.340 52.381 0.00 0.00 0.00 4.30
2704 3052 1.065709 GTGATTTAGGCCCTGTTCGGA 60.066 52.381 0.00 0.00 33.16 4.55
2705 3053 1.209504 TGATTTAGGCCCTGTTCGGAG 59.790 52.381 0.00 0.00 33.16 4.63
2706 3054 1.209747 GATTTAGGCCCTGTTCGGAGT 59.790 52.381 0.00 0.00 33.16 3.85
2707 3055 0.611714 TTTAGGCCCTGTTCGGAGTC 59.388 55.000 0.00 0.00 33.16 3.36
2708 3056 1.262640 TTAGGCCCTGTTCGGAGTCC 61.263 60.000 0.00 0.00 33.16 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.741476 CAGCAGCTGGGCGTTTCC 61.741 66.667 17.12 0.00 39.27 3.13
7 8 2.980233 ACAGCAGCTGGGCGTTTC 60.980 61.111 26.38 0.00 39.27 2.78
8 9 3.289834 CACAGCAGCTGGGCGTTT 61.290 61.111 26.38 0.79 39.27 3.60
14 15 4.421515 CCCTCCCACAGCAGCTGG 62.422 72.222 26.38 14.63 35.51 4.85
15 16 4.421515 CCCCTCCCACAGCAGCTG 62.422 72.222 21.54 21.54 37.52 4.24
18 19 4.421515 CAGCCCCTCCCACAGCAG 62.422 72.222 0.00 0.00 0.00 4.24
42 43 1.446731 CGAAAAATAGCAGCGCTTCG 58.553 50.000 7.50 8.56 40.44 3.79
43 44 1.815132 CCGAAAAATAGCAGCGCTTC 58.185 50.000 7.50 1.45 40.44 3.86
44 45 0.179163 GCCGAAAAATAGCAGCGCTT 60.179 50.000 7.50 0.00 40.44 4.68
45 46 1.429423 GCCGAAAAATAGCAGCGCT 59.571 52.632 2.64 2.64 43.41 5.92
46 47 1.934476 CGCCGAAAAATAGCAGCGC 60.934 57.895 0.00 0.00 36.89 5.92
47 48 1.297598 CCGCCGAAAAATAGCAGCG 60.298 57.895 0.00 0.00 42.99 5.18
48 49 1.064134 CCCGCCGAAAAATAGCAGC 59.936 57.895 0.00 0.00 0.00 5.25
49 50 0.746563 TCCCCGCCGAAAAATAGCAG 60.747 55.000 0.00 0.00 0.00 4.24
50 51 0.322636 TTCCCCGCCGAAAAATAGCA 60.323 50.000 0.00 0.00 0.00 3.49
51 52 1.029681 ATTCCCCGCCGAAAAATAGC 58.970 50.000 0.00 0.00 0.00 2.97
52 53 1.336755 CCATTCCCCGCCGAAAAATAG 59.663 52.381 0.00 0.00 0.00 1.73
53 54 1.394618 CCATTCCCCGCCGAAAAATA 58.605 50.000 0.00 0.00 0.00 1.40
54 55 1.955495 GCCATTCCCCGCCGAAAAAT 61.955 55.000 0.00 0.00 0.00 1.82
55 56 2.641277 GCCATTCCCCGCCGAAAAA 61.641 57.895 0.00 0.00 0.00 1.94
56 57 2.199613 TAGCCATTCCCCGCCGAAAA 62.200 55.000 0.00 0.00 0.00 2.29
57 58 1.990160 ATAGCCATTCCCCGCCGAAA 61.990 55.000 0.00 0.00 0.00 3.46
58 59 2.391724 GATAGCCATTCCCCGCCGAA 62.392 60.000 0.00 0.00 0.00 4.30
59 60 2.847234 ATAGCCATTCCCCGCCGA 60.847 61.111 0.00 0.00 0.00 5.54
60 61 1.541310 TAGATAGCCATTCCCCGCCG 61.541 60.000 0.00 0.00 0.00 6.46
61 62 0.036294 GTAGATAGCCATTCCCCGCC 60.036 60.000 0.00 0.00 0.00 6.13
62 63 0.036294 GGTAGATAGCCATTCCCCGC 60.036 60.000 0.00 0.00 0.00 6.13
63 64 0.246635 CGGTAGATAGCCATTCCCCG 59.753 60.000 0.00 0.00 0.00 5.73
64 65 0.613777 CCGGTAGATAGCCATTCCCC 59.386 60.000 0.00 0.00 0.00 4.81
65 66 1.550976 CTCCGGTAGATAGCCATTCCC 59.449 57.143 0.00 0.00 0.00 3.97
66 67 2.249139 ACTCCGGTAGATAGCCATTCC 58.751 52.381 0.00 0.00 0.00 3.01
67 68 3.444388 CCTACTCCGGTAGATAGCCATTC 59.556 52.174 0.00 0.00 46.01 2.67
68 69 3.432378 CCTACTCCGGTAGATAGCCATT 58.568 50.000 0.00 0.00 46.01 3.16
69 70 2.291670 CCCTACTCCGGTAGATAGCCAT 60.292 54.545 0.00 0.00 46.01 4.40
70 71 1.075050 CCCTACTCCGGTAGATAGCCA 59.925 57.143 0.00 0.00 46.01 4.75
71 72 1.836802 CCCTACTCCGGTAGATAGCC 58.163 60.000 0.00 0.00 46.01 3.93
72 73 1.175654 GCCCTACTCCGGTAGATAGC 58.824 60.000 0.00 0.00 46.01 2.97
73 74 1.451067 CGCCCTACTCCGGTAGATAG 58.549 60.000 0.00 0.00 46.01 2.08
74 75 0.037303 CCGCCCTACTCCGGTAGATA 59.963 60.000 0.00 0.00 46.01 1.98
75 76 1.228490 CCGCCCTACTCCGGTAGAT 60.228 63.158 0.00 0.00 46.01 1.98
76 77 2.194056 CCGCCCTACTCCGGTAGA 59.806 66.667 0.00 0.00 46.01 2.59
77 78 3.603671 GCCGCCCTACTCCGGTAG 61.604 72.222 0.00 0.00 45.98 3.18
99 100 1.132643 CACTAGCTATATCCCGGCGAC 59.867 57.143 9.30 0.00 0.00 5.19
100 101 1.460504 CACTAGCTATATCCCGGCGA 58.539 55.000 9.30 0.00 0.00 5.54
101 102 0.456221 CCACTAGCTATATCCCGGCG 59.544 60.000 0.00 0.00 0.00 6.46
102 103 1.204941 CACCACTAGCTATATCCCGGC 59.795 57.143 0.00 0.00 0.00 6.13
103 104 1.825474 CCACCACTAGCTATATCCCGG 59.175 57.143 0.00 0.00 0.00 5.73
104 105 1.204941 GCCACCACTAGCTATATCCCG 59.795 57.143 0.00 0.00 0.00 5.14
105 106 1.555533 GGCCACCACTAGCTATATCCC 59.444 57.143 0.00 0.00 0.00 3.85
106 107 1.204941 CGGCCACCACTAGCTATATCC 59.795 57.143 2.24 0.00 0.00 2.59
107 108 2.164624 CTCGGCCACCACTAGCTATATC 59.835 54.545 2.24 0.00 0.00 1.63
108 109 2.171840 CTCGGCCACCACTAGCTATAT 58.828 52.381 2.24 0.00 0.00 0.86
109 110 1.617322 CTCGGCCACCACTAGCTATA 58.383 55.000 2.24 0.00 0.00 1.31
110 111 1.115930 CCTCGGCCACCACTAGCTAT 61.116 60.000 2.24 0.00 0.00 2.97
111 112 1.756950 CCTCGGCCACCACTAGCTA 60.757 63.158 2.24 0.00 0.00 3.32
112 113 3.077556 CCTCGGCCACCACTAGCT 61.078 66.667 2.24 0.00 0.00 3.32
113 114 4.162690 CCCTCGGCCACCACTAGC 62.163 72.222 2.24 0.00 0.00 3.42
114 115 4.162690 GCCCTCGGCCACCACTAG 62.163 72.222 2.24 0.00 44.06 2.57
142 143 3.701604 CTTTCCCCGACTCGCCTCG 62.702 68.421 0.00 0.00 0.00 4.63
143 144 1.885163 TTCTTTCCCCGACTCGCCTC 61.885 60.000 0.00 0.00 0.00 4.70
144 145 1.477685 TTTCTTTCCCCGACTCGCCT 61.478 55.000 0.00 0.00 0.00 5.52
145 146 0.604511 TTTTCTTTCCCCGACTCGCC 60.605 55.000 0.00 0.00 0.00 5.54
146 147 0.516001 GTTTTCTTTCCCCGACTCGC 59.484 55.000 0.00 0.00 0.00 5.03
147 148 1.154197 GGTTTTCTTTCCCCGACTCG 58.846 55.000 0.00 0.00 0.00 4.18
148 149 2.552743 CAAGGTTTTCTTTCCCCGACTC 59.447 50.000 0.00 0.00 32.41 3.36
149 150 2.173996 TCAAGGTTTTCTTTCCCCGACT 59.826 45.455 0.00 0.00 32.41 4.18
150 151 2.292569 GTCAAGGTTTTCTTTCCCCGAC 59.707 50.000 0.00 0.00 32.41 4.79
151 152 2.173996 AGTCAAGGTTTTCTTTCCCCGA 59.826 45.455 0.00 0.00 32.41 5.14
152 153 2.583143 AGTCAAGGTTTTCTTTCCCCG 58.417 47.619 0.00 0.00 32.41 5.73
153 154 5.353394 AAAAGTCAAGGTTTTCTTTCCCC 57.647 39.130 0.00 0.00 32.41 4.81
154 155 5.357257 GGAAAAGTCAAGGTTTTCTTTCCC 58.643 41.667 7.92 0.00 41.63 3.97
155 156 5.357257 GGGAAAAGTCAAGGTTTTCTTTCC 58.643 41.667 7.92 0.00 41.63 3.13
156 157 5.128827 AGGGGAAAAGTCAAGGTTTTCTTTC 59.871 40.000 7.92 0.00 41.63 2.62
157 158 5.030147 AGGGGAAAAGTCAAGGTTTTCTTT 58.970 37.500 7.92 0.00 41.63 2.52
158 159 4.620723 AGGGGAAAAGTCAAGGTTTTCTT 58.379 39.130 7.92 0.00 41.63 2.52
159 160 4.265856 AGGGGAAAAGTCAAGGTTTTCT 57.734 40.909 7.92 0.00 41.63 2.52
160 161 5.106277 CGATAGGGGAAAAGTCAAGGTTTTC 60.106 44.000 0.00 0.00 41.33 2.29
161 162 4.765339 CGATAGGGGAAAAGTCAAGGTTTT 59.235 41.667 0.00 0.00 0.00 2.43
162 163 4.332828 CGATAGGGGAAAAGTCAAGGTTT 58.667 43.478 0.00 0.00 0.00 3.27
163 164 3.951663 CGATAGGGGAAAAGTCAAGGTT 58.048 45.455 0.00 0.00 0.00 3.50
164 165 3.629142 CGATAGGGGAAAAGTCAAGGT 57.371 47.619 0.00 0.00 0.00 3.50
179 180 1.367840 GCCTGGCCTACACCGATAG 59.632 63.158 7.66 0.00 0.00 2.08
180 181 2.495409 CGCCTGGCCTACACCGATA 61.495 63.158 14.12 0.00 0.00 2.92
181 182 3.849951 CGCCTGGCCTACACCGAT 61.850 66.667 14.12 0.00 0.00 4.18
185 186 3.901797 AAGCACGCCTGGCCTACAC 62.902 63.158 14.12 0.00 0.00 2.90
186 187 2.690653 AAAAGCACGCCTGGCCTACA 62.691 55.000 14.12 0.00 0.00 2.74
187 188 1.923227 GAAAAGCACGCCTGGCCTAC 61.923 60.000 14.12 1.95 0.00 3.18
188 189 1.674322 GAAAAGCACGCCTGGCCTA 60.674 57.895 14.12 0.00 0.00 3.93
189 190 2.985847 GAAAAGCACGCCTGGCCT 60.986 61.111 14.12 0.99 0.00 5.19
190 191 4.056125 GGAAAAGCACGCCTGGCC 62.056 66.667 14.12 0.00 0.00 5.36
191 192 4.056125 GGGAAAAGCACGCCTGGC 62.056 66.667 9.11 9.11 0.00 4.85
192 193 1.002624 TAGGGAAAAGCACGCCTGG 60.003 57.895 0.00 0.00 0.00 4.45
193 194 1.648467 GCTAGGGAAAAGCACGCCTG 61.648 60.000 0.00 0.00 39.83 4.85
194 195 1.377333 GCTAGGGAAAAGCACGCCT 60.377 57.895 0.00 0.00 39.83 5.52
195 196 2.750888 CGCTAGGGAAAAGCACGCC 61.751 63.158 0.00 0.00 40.08 5.68
196 197 2.785258 CGCTAGGGAAAAGCACGC 59.215 61.111 0.00 0.00 40.08 5.34
197 198 2.750888 GGCGCTAGGGAAAAGCACG 61.751 63.158 11.61 0.00 40.08 5.34
198 199 2.750888 CGGCGCTAGGGAAAAGCAC 61.751 63.158 11.61 0.00 40.08 4.40
199 200 2.435938 CGGCGCTAGGGAAAAGCA 60.436 61.111 11.61 0.00 40.08 3.91
200 201 3.202706 CCGGCGCTAGGGAAAAGC 61.203 66.667 11.61 0.00 36.60 3.51
201 202 1.521681 CTCCGGCGCTAGGGAAAAG 60.522 63.158 19.31 8.14 0.00 2.27
202 203 2.582436 CTCCGGCGCTAGGGAAAA 59.418 61.111 19.31 2.81 0.00 2.29
203 204 4.157120 GCTCCGGCGCTAGGGAAA 62.157 66.667 19.31 3.12 0.00 3.13
220 221 3.589542 TTGGGGAGCAGTTGGGGG 61.590 66.667 0.00 0.00 0.00 5.40
221 222 2.283173 GTTGGGGAGCAGTTGGGG 60.283 66.667 0.00 0.00 0.00 4.96
222 223 2.672996 CGTTGGGGAGCAGTTGGG 60.673 66.667 0.00 0.00 0.00 4.12
223 224 3.365265 GCGTTGGGGAGCAGTTGG 61.365 66.667 0.00 0.00 0.00 3.77
224 225 3.726517 CGCGTTGGGGAGCAGTTG 61.727 66.667 0.00 0.00 0.00 3.16
235 236 4.676586 GTCAAACCCGGCGCGTTG 62.677 66.667 11.05 9.59 0.00 4.10
240 241 3.353836 CACAGGTCAAACCCGGCG 61.354 66.667 0.00 0.00 39.75 6.46
241 242 2.112297 TCACAGGTCAAACCCGGC 59.888 61.111 0.00 0.00 39.75 6.13
242 243 1.599797 GGTCACAGGTCAAACCCGG 60.600 63.158 0.00 0.00 39.75 5.73
243 244 1.959226 CGGTCACAGGTCAAACCCG 60.959 63.158 0.00 0.00 39.75 5.28
244 245 2.258726 GCGGTCACAGGTCAAACCC 61.259 63.158 0.00 0.00 39.75 4.11
245 246 2.258726 GGCGGTCACAGGTCAAACC 61.259 63.158 0.00 0.00 38.99 3.27
246 247 2.604174 CGGCGGTCACAGGTCAAAC 61.604 63.158 0.00 0.00 0.00 2.93
247 248 2.280524 CGGCGGTCACAGGTCAAA 60.281 61.111 0.00 0.00 0.00 2.69
248 249 4.308458 CCGGCGGTCACAGGTCAA 62.308 66.667 19.97 0.00 0.00 3.18
261 262 3.744719 GACCTTTTTCCGCCCGGC 61.745 66.667 0.00 0.00 34.68 6.13
262 263 3.060000 GGACCTTTTTCCGCCCGG 61.060 66.667 0.00 0.00 0.00 5.73
279 280 2.398036 CCGAAAATCGCCGGTTCG 59.602 61.111 15.14 15.14 42.85 3.95
280 281 1.988834 ATGCCGAAAATCGCCGGTTC 61.989 55.000 1.90 0.00 46.84 3.62
281 282 1.988834 GATGCCGAAAATCGCCGGTT 61.989 55.000 1.90 0.00 46.84 4.44
282 283 2.437716 ATGCCGAAAATCGCCGGT 60.438 55.556 1.90 0.00 46.84 5.28
284 285 0.878523 TAGGATGCCGAAAATCGCCG 60.879 55.000 0.00 0.00 38.82 6.46
285 286 1.264288 CTTAGGATGCCGAAAATCGCC 59.736 52.381 0.00 0.00 38.82 5.54
286 287 2.210116 TCTTAGGATGCCGAAAATCGC 58.790 47.619 0.00 0.00 38.82 4.58
287 288 2.221981 GCTCTTAGGATGCCGAAAATCG 59.778 50.000 0.00 0.00 40.07 3.34
288 289 2.221981 CGCTCTTAGGATGCCGAAAATC 59.778 50.000 0.00 0.00 0.00 2.17
289 290 2.213499 CGCTCTTAGGATGCCGAAAAT 58.787 47.619 0.00 0.00 0.00 1.82
290 291 1.651987 CGCTCTTAGGATGCCGAAAA 58.348 50.000 0.00 0.00 0.00 2.29
291 292 0.810031 GCGCTCTTAGGATGCCGAAA 60.810 55.000 0.00 0.00 0.00 3.46
292 293 1.227263 GCGCTCTTAGGATGCCGAA 60.227 57.895 0.00 0.00 0.00 4.30
293 294 2.417516 GCGCTCTTAGGATGCCGA 59.582 61.111 0.00 0.00 0.00 5.54
294 295 3.032609 CGCGCTCTTAGGATGCCG 61.033 66.667 5.56 0.00 0.00 5.69
295 296 1.951631 GTCGCGCTCTTAGGATGCC 60.952 63.158 5.56 0.00 0.00 4.40
296 297 0.311165 TAGTCGCGCTCTTAGGATGC 59.689 55.000 5.56 0.00 0.00 3.91
297 298 1.068885 CCTAGTCGCGCTCTTAGGATG 60.069 57.143 17.90 0.00 0.00 3.51
298 299 1.240256 CCTAGTCGCGCTCTTAGGAT 58.760 55.000 17.90 0.00 0.00 3.24
299 300 1.445716 GCCTAGTCGCGCTCTTAGGA 61.446 60.000 23.72 4.49 0.00 2.94
300 301 1.008309 GCCTAGTCGCGCTCTTAGG 60.008 63.158 18.25 18.25 0.00 2.69
301 302 1.008309 GGCCTAGTCGCGCTCTTAG 60.008 63.158 5.56 3.91 0.00 2.18
302 303 2.831366 CGGCCTAGTCGCGCTCTTA 61.831 63.158 5.56 0.00 0.00 2.10
303 304 4.194720 CGGCCTAGTCGCGCTCTT 62.195 66.667 5.56 0.00 0.00 2.85
305 306 3.984200 AAACGGCCTAGTCGCGCTC 62.984 63.158 5.56 0.00 32.11 5.03
306 307 3.584868 AAAACGGCCTAGTCGCGCT 62.585 57.895 5.56 4.52 32.11 5.92
307 308 2.674084 AAAAACGGCCTAGTCGCGC 61.674 57.895 0.00 0.00 32.11 6.86
308 309 3.557824 AAAAACGGCCTAGTCGCG 58.442 55.556 0.00 0.00 32.11 5.87
332 333 4.398598 CCACTTTTTCGGCGCCGG 62.399 66.667 44.95 31.46 40.25 6.13
338 339 2.275380 CCCCAGGCCACTTTTTCGG 61.275 63.158 5.01 0.00 0.00 4.30
339 340 2.275380 CCCCCAGGCCACTTTTTCG 61.275 63.158 5.01 0.00 0.00 3.46
340 341 3.791640 CCCCCAGGCCACTTTTTC 58.208 61.111 5.01 0.00 0.00 2.29
374 375 1.346068 CTACCTAAGGGCATCTCCAGC 59.654 57.143 0.00 0.00 36.21 4.85
375 376 2.896685 CTCTACCTAAGGGCATCTCCAG 59.103 54.545 0.00 0.00 36.21 3.86
376 377 2.518407 TCTCTACCTAAGGGCATCTCCA 59.482 50.000 0.00 0.00 36.21 3.86
377 378 3.246416 TCTCTACCTAAGGGCATCTCC 57.754 52.381 0.00 0.00 35.63 3.71
378 379 3.006430 GCTTCTCTACCTAAGGGCATCTC 59.994 52.174 0.00 0.00 35.63 2.75
379 380 2.969262 GCTTCTCTACCTAAGGGCATCT 59.031 50.000 0.00 0.00 35.63 2.90
380 381 2.037902 GGCTTCTCTACCTAAGGGCATC 59.962 54.545 0.00 0.00 35.63 3.91
381 382 2.050918 GGCTTCTCTACCTAAGGGCAT 58.949 52.381 0.00 0.00 35.63 4.40
382 383 1.497161 GGCTTCTCTACCTAAGGGCA 58.503 55.000 0.00 0.00 35.63 5.36
383 384 0.389757 CGGCTTCTCTACCTAAGGGC 59.610 60.000 0.00 0.00 35.63 5.19
384 385 0.389757 GCGGCTTCTCTACCTAAGGG 59.610 60.000 0.00 0.00 38.88 3.95
385 386 0.030908 CGCGGCTTCTCTACCTAAGG 59.969 60.000 0.00 0.00 0.00 2.69
386 387 0.030908 CCGCGGCTTCTCTACCTAAG 59.969 60.000 14.67 0.00 0.00 2.18
387 388 0.682209 ACCGCGGCTTCTCTACCTAA 60.682 55.000 28.58 0.00 0.00 2.69
388 389 1.077212 ACCGCGGCTTCTCTACCTA 60.077 57.895 28.58 0.00 0.00 3.08
389 390 2.362632 ACCGCGGCTTCTCTACCT 60.363 61.111 28.58 0.00 0.00 3.08
390 391 2.202756 CACCGCGGCTTCTCTACC 60.203 66.667 28.58 0.00 0.00 3.18
391 392 2.886124 GCACCGCGGCTTCTCTAC 60.886 66.667 28.58 1.40 0.00 2.59
392 393 3.378602 TGCACCGCGGCTTCTCTA 61.379 61.111 28.58 1.36 34.04 2.43
418 419 2.480419 GACGTGCAAGTAAGATGCTTGT 59.520 45.455 4.92 0.00 43.65 3.16
527 532 2.035961 CTCTTGGTGAAGAAGGTCGTCA 59.964 50.000 0.00 0.00 37.77 4.35
528 533 2.296471 TCTCTTGGTGAAGAAGGTCGTC 59.704 50.000 0.00 0.00 37.77 4.20
529 534 2.297597 CTCTCTTGGTGAAGAAGGTCGT 59.702 50.000 0.00 0.00 37.77 4.34
530 535 2.928731 GCTCTCTTGGTGAAGAAGGTCG 60.929 54.545 0.00 0.00 37.77 4.79
549 564 1.872773 ATCTTTCGGGAAGAGGAGCT 58.127 50.000 4.81 0.00 46.99 4.09
565 580 7.030165 CGTGTCACTCTGTAGAAAATGTATCT 58.970 38.462 0.65 0.00 0.00 1.98
566 581 6.237595 GCGTGTCACTCTGTAGAAAATGTATC 60.238 42.308 0.65 0.00 0.00 2.24
567 582 5.577164 GCGTGTCACTCTGTAGAAAATGTAT 59.423 40.000 0.65 0.00 0.00 2.29
570 585 3.123621 GGCGTGTCACTCTGTAGAAAATG 59.876 47.826 0.65 0.00 0.00 2.32
571 586 3.326747 GGCGTGTCACTCTGTAGAAAAT 58.673 45.455 0.65 0.00 0.00 1.82
572 587 2.547218 GGGCGTGTCACTCTGTAGAAAA 60.547 50.000 0.65 0.00 0.00 2.29
577 596 0.826256 AGTGGGCGTGTCACTCTGTA 60.826 55.000 0.65 0.00 41.10 2.74
630 663 0.821301 GCCTCCTTCCTTGGCTATGC 60.821 60.000 0.00 0.00 43.05 3.14
658 691 2.284952 CCTTTTTCTTTTGTGCGGCTTG 59.715 45.455 0.00 0.00 0.00 4.01
671 704 2.907042 ACGACCTCCATCTCCTTTTTCT 59.093 45.455 0.00 0.00 0.00 2.52
672 705 3.336138 ACGACCTCCATCTCCTTTTTC 57.664 47.619 0.00 0.00 0.00 2.29
684 717 0.731855 GACGTAGCACAACGACCTCC 60.732 60.000 12.36 0.00 45.68 4.30
692 725 0.109458 CGCTAGTGGACGTAGCACAA 60.109 55.000 7.93 0.00 42.69 3.33
726 759 0.407139 GGGTAGGGGGTAGCTCGATA 59.593 60.000 0.00 0.00 0.00 2.92
735 768 1.081481 CTTCCAAAAGGGTAGGGGGT 58.919 55.000 0.00 0.00 38.11 4.95
751 784 6.531240 TGAATCAATTGCGCTAAAATTCCTTC 59.469 34.615 9.73 11.17 0.00 3.46
763 796 1.322338 GTGCACATGAATCAATTGCGC 59.678 47.619 13.17 14.42 35.90 6.09
775 808 3.434319 GGCTGGGACGTGCACATG 61.434 66.667 18.64 3.67 32.38 3.21
813 846 2.010497 GCTTTTCTCTCCGGTGATTCC 58.990 52.381 6.68 0.00 0.00 3.01
814 847 2.699954 TGCTTTTCTCTCCGGTGATTC 58.300 47.619 6.68 0.00 0.00 2.52
816 849 2.039084 AGTTGCTTTTCTCTCCGGTGAT 59.961 45.455 6.68 0.00 0.00 3.06
817 850 1.416401 AGTTGCTTTTCTCTCCGGTGA 59.584 47.619 6.00 6.00 0.00 4.02
818 851 1.884235 AGTTGCTTTTCTCTCCGGTG 58.116 50.000 0.00 0.00 0.00 4.94
820 853 3.254892 GACTAGTTGCTTTTCTCTCCGG 58.745 50.000 0.00 0.00 0.00 5.14
821 854 3.254892 GGACTAGTTGCTTTTCTCTCCG 58.745 50.000 0.00 0.00 0.00 4.63
822 855 3.997681 GTGGACTAGTTGCTTTTCTCTCC 59.002 47.826 0.00 0.00 0.00 3.71
836 879 3.254060 CAACGATCTTGGTGTGGACTAG 58.746 50.000 0.00 0.00 0.00 2.57
866 912 2.222027 GGTAGCATGGTATTGTGGAGC 58.778 52.381 8.06 0.00 0.00 4.70
902 954 1.122019 GGGACGGAGACAGGGCATAT 61.122 60.000 0.00 0.00 0.00 1.78
903 955 1.760875 GGGACGGAGACAGGGCATA 60.761 63.158 0.00 0.00 0.00 3.14
930 982 0.390492 AGCAAAGCAAAGGAAGGCAC 59.610 50.000 0.00 0.00 0.00 5.01
933 985 2.867975 CACAAAGCAAAGCAAAGGAAGG 59.132 45.455 0.00 0.00 0.00 3.46
955 1007 1.121240 CGTGTCTTATAGCCGCGAAG 58.879 55.000 8.23 2.23 34.22 3.79
956 1008 0.868602 GCGTGTCTTATAGCCGCGAA 60.869 55.000 8.23 0.00 34.66 4.70
959 1011 3.626472 GGCGTGTCTTATAGCCGC 58.374 61.111 0.00 0.00 43.35 6.53
979 1039 0.664166 GTGTTGCATGCGTTCTTGGG 60.664 55.000 14.09 0.00 0.00 4.12
992 1052 1.242076 AAGATGCAGAGTGGTGTTGC 58.758 50.000 0.00 0.00 38.30 4.17
993 1053 3.144506 AGAAAGATGCAGAGTGGTGTTG 58.855 45.455 0.00 0.00 0.00 3.33
994 1054 3.498774 AGAAAGATGCAGAGTGGTGTT 57.501 42.857 0.00 0.00 0.00 3.32
995 1055 3.406764 GAAGAAAGATGCAGAGTGGTGT 58.593 45.455 0.00 0.00 0.00 4.16
996 1056 2.746362 GGAAGAAAGATGCAGAGTGGTG 59.254 50.000 0.00 0.00 0.00 4.17
997 1057 2.641815 AGGAAGAAAGATGCAGAGTGGT 59.358 45.455 0.00 0.00 0.00 4.16
998 1058 3.269178 GAGGAAGAAAGATGCAGAGTGG 58.731 50.000 0.00 0.00 0.00 4.00
1000 1060 3.180507 AGGAGGAAGAAAGATGCAGAGT 58.819 45.455 0.00 0.00 0.00 3.24
1001 1061 3.910568 AGGAGGAAGAAAGATGCAGAG 57.089 47.619 0.00 0.00 0.00 3.35
1002 1062 3.328931 ACAAGGAGGAAGAAAGATGCAGA 59.671 43.478 0.00 0.00 0.00 4.26
1022 1121 3.701542 AGCTGGAGATTGATACGAAGACA 59.298 43.478 0.00 0.00 0.00 3.41
1045 1144 1.908483 GGTCCTTCATCGGAGCCTT 59.092 57.895 0.00 0.00 43.94 4.35
1046 1145 2.427245 CGGTCCTTCATCGGAGCCT 61.427 63.158 3.72 0.00 46.28 4.58
1076 1184 0.463295 CATGCAGCCGATGGAGAAGT 60.463 55.000 0.00 0.00 30.11 3.01
1170 1299 0.858598 TGGAGGAGGAGGAGGGGTTA 60.859 60.000 0.00 0.00 0.00 2.85
1190 1319 1.414919 GTCACTTACCCTGTGTGGTGA 59.585 52.381 0.00 0.00 39.53 4.02
1223 1378 6.128553 GCATCGATCGTGGTATGAATTATTGT 60.129 38.462 15.94 0.00 0.00 2.71
1224 1379 6.243551 GCATCGATCGTGGTATGAATTATTG 58.756 40.000 15.94 0.00 0.00 1.90
1291 1454 2.686915 GAGTCTCAATGAAATGGGCCAG 59.313 50.000 13.78 0.00 0.00 4.85
1292 1455 2.041485 TGAGTCTCAATGAAATGGGCCA 59.959 45.455 9.61 9.61 0.00 5.36
1294 1457 3.376546 GTCTGAGTCTCAATGAAATGGGC 59.623 47.826 3.67 0.00 0.00 5.36
1296 1459 5.485620 TCTGTCTGAGTCTCAATGAAATGG 58.514 41.667 3.67 0.00 0.00 3.16
1297 1460 5.063691 GCTCTGTCTGAGTCTCAATGAAATG 59.936 44.000 3.67 0.00 44.41 2.32
1298 1461 5.177326 GCTCTGTCTGAGTCTCAATGAAAT 58.823 41.667 3.67 0.00 44.41 2.17
1299 1462 4.039609 TGCTCTGTCTGAGTCTCAATGAAA 59.960 41.667 3.67 0.00 44.41 2.69
1300 1463 3.575687 TGCTCTGTCTGAGTCTCAATGAA 59.424 43.478 3.67 0.00 44.41 2.57
1301 1464 3.056962 GTGCTCTGTCTGAGTCTCAATGA 60.057 47.826 3.67 0.00 44.41 2.57
1302 1465 3.252400 GTGCTCTGTCTGAGTCTCAATG 58.748 50.000 3.67 0.00 44.41 2.82
1303 1466 2.233431 GGTGCTCTGTCTGAGTCTCAAT 59.767 50.000 3.67 0.00 44.41 2.57
1306 1469 0.530288 GGGTGCTCTGTCTGAGTCTC 59.470 60.000 8.37 0.00 44.41 3.36
1322 1485 2.039137 GTCCCTTCCTCTCGGGGT 59.961 66.667 0.00 0.00 40.99 4.95
1358 1521 1.726853 CTGCGACGATCCCTTCTTTT 58.273 50.000 0.00 0.00 0.00 2.27
1562 1776 4.741239 GGGAGGGAGGAGGGCACA 62.741 72.222 0.00 0.00 0.00 4.57
1563 1777 4.423209 AGGGAGGGAGGAGGGCAC 62.423 72.222 0.00 0.00 0.00 5.01
1633 1847 4.778213 TGGAGAATTAGGGATCAGTTGG 57.222 45.455 0.00 0.00 0.00 3.77
1644 1858 5.541845 TCCTATGACGCAATGGAGAATTAG 58.458 41.667 0.00 0.00 0.00 1.73
1659 1877 3.027412 TGAGCTTGAGGTCTCCTATGAC 58.973 50.000 11.07 0.00 42.60 3.06
1661 1879 3.740764 GCTTGAGCTTGAGGTCTCCTATG 60.741 52.174 11.07 0.00 42.60 2.23
1662 1880 2.433970 GCTTGAGCTTGAGGTCTCCTAT 59.566 50.000 11.07 0.00 42.60 2.57
1663 1881 1.827969 GCTTGAGCTTGAGGTCTCCTA 59.172 52.381 11.07 0.00 42.60 2.94
1664 1882 0.612744 GCTTGAGCTTGAGGTCTCCT 59.387 55.000 11.07 0.00 42.60 3.69
1666 1884 1.803555 GTTGCTTGAGCTTGAGGTCTC 59.196 52.381 11.07 2.42 42.60 3.36
1667 1885 1.544314 GGTTGCTTGAGCTTGAGGTCT 60.544 52.381 11.07 0.00 42.60 3.85
1668 1886 0.877743 GGTTGCTTGAGCTTGAGGTC 59.122 55.000 4.44 3.34 42.66 3.85
1712 1980 2.098934 GGTGCGCCATTCATTCATGTAA 59.901 45.455 12.58 0.00 34.09 2.41
1715 1983 0.742505 AGGTGCGCCATTCATTCATG 59.257 50.000 20.59 0.00 37.19 3.07
1717 1985 1.065491 AGTAGGTGCGCCATTCATTCA 60.065 47.619 20.59 0.00 37.19 2.57
1720 1988 2.434336 TCTTAGTAGGTGCGCCATTCAT 59.566 45.455 20.59 0.00 37.19 2.57
1732 2000 2.099427 GGTGAGGCGACTTCTTAGTAGG 59.901 54.545 0.00 0.00 44.43 3.18
1735 2003 0.896226 GGGTGAGGCGACTTCTTAGT 59.104 55.000 0.00 0.00 44.43 2.24
1739 2007 3.382832 CCGGGTGAGGCGACTTCT 61.383 66.667 0.00 0.00 44.43 2.85
1816 2098 0.109086 AGTCATCGAACAGCCACTCG 60.109 55.000 0.00 0.00 36.39 4.18
1819 2101 2.263077 CTACAGTCATCGAACAGCCAC 58.737 52.381 0.00 0.00 0.00 5.01
1834 2118 1.269621 GGGTGCGTACTATGCCTACAG 60.270 57.143 3.01 0.00 0.00 2.74
1841 2125 0.530650 CTGGCTGGGTGCGTACTATG 60.531 60.000 3.01 0.00 44.05 2.23
1842 2126 0.686441 TCTGGCTGGGTGCGTACTAT 60.686 55.000 3.01 0.00 44.05 2.12
1843 2127 1.304630 TCTGGCTGGGTGCGTACTA 60.305 57.895 3.01 0.00 44.05 1.82
1844 2128 2.603473 TCTGGCTGGGTGCGTACT 60.603 61.111 3.01 0.00 44.05 2.73
1845 2129 2.125512 CTCTGGCTGGGTGCGTAC 60.126 66.667 0.00 0.00 44.05 3.67
1846 2130 1.888436 CTTCTCTGGCTGGGTGCGTA 61.888 60.000 0.00 0.00 44.05 4.42
1847 2131 3.241530 TTCTCTGGCTGGGTGCGT 61.242 61.111 0.00 0.00 44.05 5.24
1848 2132 2.435586 CTTCTCTGGCTGGGTGCG 60.436 66.667 0.00 0.00 44.05 5.34
1891 2175 3.812019 CTCGTCCACTCCGTCGGG 61.812 72.222 12.29 4.77 0.00 5.14
1903 2187 1.446966 GGAGCTGGCAAGTCTCGTC 60.447 63.158 0.00 0.00 31.29 4.20
1904 2188 2.659610 GGAGCTGGCAAGTCTCGT 59.340 61.111 0.00 0.00 31.29 4.18
1906 2190 2.250741 GAGGGGAGCTGGCAAGTCTC 62.251 65.000 0.00 4.47 0.00 3.36
1908 2192 2.250741 GAGAGGGGAGCTGGCAAGTC 62.251 65.000 0.00 0.00 0.00 3.01
1909 2193 2.204059 AGAGGGGAGCTGGCAAGT 60.204 61.111 0.00 0.00 0.00 3.16
1910 2194 2.588989 GAGAGGGGAGCTGGCAAG 59.411 66.667 0.00 0.00 0.00 4.01
1911 2195 3.393970 CGAGAGGGGAGCTGGCAA 61.394 66.667 0.00 0.00 0.00 4.52
1912 2196 4.704103 ACGAGAGGGGAGCTGGCA 62.704 66.667 0.00 0.00 0.00 4.92
1913 2197 4.154347 CACGAGAGGGGAGCTGGC 62.154 72.222 0.00 0.00 0.00 4.85
1914 2198 2.681778 ACACGAGAGGGGAGCTGG 60.682 66.667 0.00 0.00 40.46 4.85
1915 2199 2.219325 GACACACGAGAGGGGAGCTG 62.219 65.000 0.00 0.00 40.46 4.24
1916 2200 1.979693 GACACACGAGAGGGGAGCT 60.980 63.158 0.00 0.00 40.46 4.09
1917 2201 2.574399 GACACACGAGAGGGGAGC 59.426 66.667 0.00 0.00 40.46 4.70
1918 2202 0.972983 ATGGACACACGAGAGGGGAG 60.973 60.000 0.00 0.00 40.46 4.30
1919 2203 0.970937 GATGGACACACGAGAGGGGA 60.971 60.000 0.00 0.00 40.46 4.81
1920 2204 1.517832 GATGGACACACGAGAGGGG 59.482 63.158 0.00 0.00 40.46 4.79
1921 2205 1.517832 GGATGGACACACGAGAGGG 59.482 63.158 0.00 0.00 43.28 4.30
1922 2206 1.139734 CGGATGGACACACGAGAGG 59.860 63.158 0.00 0.00 0.00 3.69
1923 2207 1.092348 TACGGATGGACACACGAGAG 58.908 55.000 0.00 0.00 0.00 3.20
1924 2208 0.806868 GTACGGATGGACACACGAGA 59.193 55.000 0.00 0.00 0.00 4.04
1925 2209 0.809385 AGTACGGATGGACACACGAG 59.191 55.000 0.00 0.00 0.00 4.18
1926 2210 0.806868 GAGTACGGATGGACACACGA 59.193 55.000 0.00 0.00 0.00 4.35
1927 2211 0.179145 GGAGTACGGATGGACACACG 60.179 60.000 0.00 0.00 0.00 4.49
1928 2212 0.175073 GGGAGTACGGATGGACACAC 59.825 60.000 0.00 0.00 0.00 3.82
1929 2213 1.317431 CGGGAGTACGGATGGACACA 61.317 60.000 0.00 0.00 0.00 3.72
1930 2214 1.436336 CGGGAGTACGGATGGACAC 59.564 63.158 0.00 0.00 0.00 3.67
1931 2215 3.929002 CGGGAGTACGGATGGACA 58.071 61.111 0.00 0.00 0.00 4.02
1939 2223 1.650912 CCACGTATCCGGGAGTACG 59.349 63.158 24.48 24.48 46.59 3.67
1940 2224 1.105759 AGCCACGTATCCGGGAGTAC 61.106 60.000 0.00 1.93 41.01 2.73
1941 2225 0.396139 AAGCCACGTATCCGGGAGTA 60.396 55.000 0.00 0.00 41.01 2.59
1942 2226 1.684734 AAGCCACGTATCCGGGAGT 60.685 57.895 0.00 0.00 41.01 3.85
1943 2227 1.227263 CAAGCCACGTATCCGGGAG 60.227 63.158 0.00 0.00 41.01 4.30
1944 2228 1.046472 ATCAAGCCACGTATCCGGGA 61.046 55.000 0.00 0.00 41.01 5.14
1945 2229 0.179056 AATCAAGCCACGTATCCGGG 60.179 55.000 0.00 0.00 38.78 5.73
1946 2230 1.330521 CAAATCAAGCCACGTATCCGG 59.669 52.381 0.00 0.00 38.78 5.14
1947 2231 2.276201 TCAAATCAAGCCACGTATCCG 58.724 47.619 0.00 0.00 40.83 4.18
1948 2232 4.498009 CCAATCAAATCAAGCCACGTATCC 60.498 45.833 0.00 0.00 0.00 2.59
1949 2233 4.335315 TCCAATCAAATCAAGCCACGTATC 59.665 41.667 0.00 0.00 0.00 2.24
1950 2234 4.269183 TCCAATCAAATCAAGCCACGTAT 58.731 39.130 0.00 0.00 0.00 3.06
1951 2235 3.680490 TCCAATCAAATCAAGCCACGTA 58.320 40.909 0.00 0.00 0.00 3.57
1952 2236 2.513753 TCCAATCAAATCAAGCCACGT 58.486 42.857 0.00 0.00 0.00 4.49
1953 2237 3.244976 GTTCCAATCAAATCAAGCCACG 58.755 45.455 0.00 0.00 0.00 4.94
1954 2238 4.255833 TGTTCCAATCAAATCAAGCCAC 57.744 40.909 0.00 0.00 0.00 5.01
1955 2239 4.952071 TTGTTCCAATCAAATCAAGCCA 57.048 36.364 0.00 0.00 0.00 4.75
1956 2240 6.806388 ATTTTGTTCCAATCAAATCAAGCC 57.194 33.333 0.00 0.00 35.25 4.35
1957 2241 9.206870 TCTTATTTTGTTCCAATCAAATCAAGC 57.793 29.630 0.00 0.00 35.25 4.01
1959 2243 9.487790 GGTCTTATTTTGTTCCAATCAAATCAA 57.512 29.630 0.00 0.00 35.25 2.57
1960 2244 8.093927 GGGTCTTATTTTGTTCCAATCAAATCA 58.906 33.333 0.00 0.00 35.25 2.57
1961 2245 7.275560 CGGGTCTTATTTTGTTCCAATCAAATC 59.724 37.037 0.00 0.00 35.25 2.17
1962 2246 7.096551 CGGGTCTTATTTTGTTCCAATCAAAT 58.903 34.615 0.00 0.00 35.25 2.32
1963 2247 6.451393 CGGGTCTTATTTTGTTCCAATCAAA 58.549 36.000 0.00 0.00 33.76 2.69
1964 2248 5.047660 CCGGGTCTTATTTTGTTCCAATCAA 60.048 40.000 0.00 0.00 0.00 2.57
1965 2249 4.461081 CCGGGTCTTATTTTGTTCCAATCA 59.539 41.667 0.00 0.00 0.00 2.57
1966 2250 4.676986 GCCGGGTCTTATTTTGTTCCAATC 60.677 45.833 2.18 0.00 0.00 2.67
1967 2251 3.194755 GCCGGGTCTTATTTTGTTCCAAT 59.805 43.478 2.18 0.00 0.00 3.16
1968 2252 2.559231 GCCGGGTCTTATTTTGTTCCAA 59.441 45.455 2.18 0.00 0.00 3.53
1969 2253 2.164338 GCCGGGTCTTATTTTGTTCCA 58.836 47.619 2.18 0.00 0.00 3.53
1970 2254 1.475280 GGCCGGGTCTTATTTTGTTCC 59.525 52.381 2.18 0.00 0.00 3.62
1971 2255 1.475280 GGGCCGGGTCTTATTTTGTTC 59.525 52.381 2.18 0.00 0.00 3.18
1972 2256 1.552578 GGGCCGGGTCTTATTTTGTT 58.447 50.000 2.18 0.00 0.00 2.83
1973 2257 0.323999 GGGGCCGGGTCTTATTTTGT 60.324 55.000 2.18 0.00 0.00 2.83
1974 2258 0.323908 TGGGGCCGGGTCTTATTTTG 60.324 55.000 2.18 0.00 0.00 2.44
1975 2259 0.323999 GTGGGGCCGGGTCTTATTTT 60.324 55.000 2.18 0.00 0.00 1.82
1976 2260 1.305287 GTGGGGCCGGGTCTTATTT 59.695 57.895 2.18 0.00 0.00 1.40
1977 2261 2.686572 GGTGGGGCCGGGTCTTATT 61.687 63.158 2.18 0.00 0.00 1.40
1978 2262 3.094498 GGTGGGGCCGGGTCTTAT 61.094 66.667 2.18 0.00 0.00 1.73
1979 2263 4.342086 AGGTGGGGCCGGGTCTTA 62.342 66.667 2.18 0.00 43.70 2.10
1985 2269 2.144859 TTTTAAGGAGGTGGGGCCGG 62.145 60.000 0.00 0.00 43.70 6.13
1986 2270 0.033503 ATTTTAAGGAGGTGGGGCCG 60.034 55.000 0.00 0.00 43.70 6.13
1987 2271 1.288037 AGATTTTAAGGAGGTGGGGCC 59.712 52.381 0.00 0.00 37.58 5.80
1988 2272 2.379005 CAGATTTTAAGGAGGTGGGGC 58.621 52.381 0.00 0.00 0.00 5.80
1989 2273 2.358195 CCCAGATTTTAAGGAGGTGGGG 60.358 54.545 0.00 0.00 39.69 4.96
1990 2274 2.358195 CCCCAGATTTTAAGGAGGTGGG 60.358 54.545 0.00 0.00 42.54 4.61
1991 2275 2.358195 CCCCCAGATTTTAAGGAGGTGG 60.358 54.545 0.00 0.00 0.00 4.61
1992 2276 3.018423 CCCCCAGATTTTAAGGAGGTG 57.982 52.381 0.00 0.00 0.00 4.00
2009 2293 7.526918 TCCTTTCTAATCTAATCATTTCCCCC 58.473 38.462 0.00 0.00 0.00 5.40
2010 2294 8.996651 TTCCTTTCTAATCTAATCATTTCCCC 57.003 34.615 0.00 0.00 0.00 4.81
2042 2326 2.554032 CTCATCCAACGGCTGTCTTTTT 59.446 45.455 0.00 0.00 0.00 1.94
2043 2327 2.154462 CTCATCCAACGGCTGTCTTTT 58.846 47.619 0.00 0.00 0.00 2.27
2044 2328 1.611673 CCTCATCCAACGGCTGTCTTT 60.612 52.381 0.00 0.00 0.00 2.52
2045 2329 0.036010 CCTCATCCAACGGCTGTCTT 60.036 55.000 0.00 0.00 0.00 3.01
2046 2330 1.194781 ACCTCATCCAACGGCTGTCT 61.195 55.000 0.00 0.00 0.00 3.41
2047 2331 1.021390 CACCTCATCCAACGGCTGTC 61.021 60.000 0.00 0.00 0.00 3.51
2048 2332 1.003355 CACCTCATCCAACGGCTGT 60.003 57.895 0.00 0.00 0.00 4.40
2049 2333 1.746615 CCACCTCATCCAACGGCTG 60.747 63.158 0.00 0.00 0.00 4.85
2050 2334 2.671070 CCACCTCATCCAACGGCT 59.329 61.111 0.00 0.00 0.00 5.52
2051 2335 2.438434 CCCACCTCATCCAACGGC 60.438 66.667 0.00 0.00 0.00 5.68
2052 2336 1.221840 CTCCCACCTCATCCAACGG 59.778 63.158 0.00 0.00 0.00 4.44
2053 2337 1.450312 GCTCCCACCTCATCCAACG 60.450 63.158 0.00 0.00 0.00 4.10
2054 2338 0.678048 GTGCTCCCACCTCATCCAAC 60.678 60.000 0.00 0.00 35.92 3.77
2055 2339 1.685224 GTGCTCCCACCTCATCCAA 59.315 57.895 0.00 0.00 35.92 3.53
2056 2340 2.659063 CGTGCTCCCACCTCATCCA 61.659 63.158 0.00 0.00 38.79 3.41
2057 2341 2.187946 CGTGCTCCCACCTCATCC 59.812 66.667 0.00 0.00 38.79 3.51
2058 2342 1.690219 ATCCGTGCTCCCACCTCATC 61.690 60.000 0.00 0.00 38.79 2.92
2059 2343 0.398522 TATCCGTGCTCCCACCTCAT 60.399 55.000 0.00 0.00 38.79 2.90
2060 2344 1.001120 TATCCGTGCTCCCACCTCA 59.999 57.895 0.00 0.00 38.79 3.86
2061 2345 1.742768 CTATCCGTGCTCCCACCTC 59.257 63.158 0.00 0.00 38.79 3.85
2062 2346 1.762460 CCTATCCGTGCTCCCACCT 60.762 63.158 0.00 0.00 38.79 4.00
2063 2347 1.749334 CTCCTATCCGTGCTCCCACC 61.749 65.000 0.00 0.00 38.79 4.61
2064 2348 1.043673 ACTCCTATCCGTGCTCCCAC 61.044 60.000 0.00 0.00 38.62 4.61
2065 2349 0.554305 TACTCCTATCCGTGCTCCCA 59.446 55.000 0.00 0.00 0.00 4.37
2066 2350 1.546476 CATACTCCTATCCGTGCTCCC 59.454 57.143 0.00 0.00 0.00 4.30
2067 2351 2.490115 CTCATACTCCTATCCGTGCTCC 59.510 54.545 0.00 0.00 0.00 4.70
2068 2352 3.413327 TCTCATACTCCTATCCGTGCTC 58.587 50.000 0.00 0.00 0.00 4.26
2069 2353 3.510531 TCTCATACTCCTATCCGTGCT 57.489 47.619 0.00 0.00 0.00 4.40
2070 2354 3.057174 CCTTCTCATACTCCTATCCGTGC 60.057 52.174 0.00 0.00 0.00 5.34
2071 2355 3.508012 CCCTTCTCATACTCCTATCCGTG 59.492 52.174 0.00 0.00 0.00 4.94
2072 2356 3.398292 TCCCTTCTCATACTCCTATCCGT 59.602 47.826 0.00 0.00 0.00 4.69
2073 2357 4.013728 CTCCCTTCTCATACTCCTATCCG 58.986 52.174 0.00 0.00 0.00 4.18
2074 2358 3.767131 GCTCCCTTCTCATACTCCTATCC 59.233 52.174 0.00 0.00 0.00 2.59
2075 2359 4.411927 TGCTCCCTTCTCATACTCCTATC 58.588 47.826 0.00 0.00 0.00 2.08
2076 2360 4.415596 CTGCTCCCTTCTCATACTCCTAT 58.584 47.826 0.00 0.00 0.00 2.57
2077 2361 3.437198 CCTGCTCCCTTCTCATACTCCTA 60.437 52.174 0.00 0.00 0.00 2.94
2078 2362 2.676748 CTGCTCCCTTCTCATACTCCT 58.323 52.381 0.00 0.00 0.00 3.69
2079 2363 1.691434 CCTGCTCCCTTCTCATACTCC 59.309 57.143 0.00 0.00 0.00 3.85
2080 2364 1.069978 GCCTGCTCCCTTCTCATACTC 59.930 57.143 0.00 0.00 0.00 2.59
2081 2365 1.127343 GCCTGCTCCCTTCTCATACT 58.873 55.000 0.00 0.00 0.00 2.12
2082 2366 0.833287 TGCCTGCTCCCTTCTCATAC 59.167 55.000 0.00 0.00 0.00 2.39
2083 2367 1.487976 CTTGCCTGCTCCCTTCTCATA 59.512 52.381 0.00 0.00 0.00 2.15
2084 2368 0.255318 CTTGCCTGCTCCCTTCTCAT 59.745 55.000 0.00 0.00 0.00 2.90
2085 2369 1.681666 CTTGCCTGCTCCCTTCTCA 59.318 57.895 0.00 0.00 0.00 3.27
2086 2370 1.748500 GCTTGCCTGCTCCCTTCTC 60.749 63.158 0.00 0.00 0.00 2.87
2087 2371 2.354343 GCTTGCCTGCTCCCTTCT 59.646 61.111 0.00 0.00 0.00 2.85
2088 2372 2.753446 GGCTTGCCTGCTCCCTTC 60.753 66.667 4.11 0.00 0.00 3.46
2089 2373 4.729918 CGGCTTGCCTGCTCCCTT 62.730 66.667 10.12 0.00 0.00 3.95
2092 2376 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
2093 2377 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
2094 2378 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
2106 2390 2.494918 CACACTCCGTCGGGATCC 59.505 66.667 12.29 1.92 42.83 3.36
2107 2391 2.494918 CCACACTCCGTCGGGATC 59.505 66.667 12.29 0.00 42.83 3.36
2108 2392 3.075005 CCCACACTCCGTCGGGAT 61.075 66.667 12.29 0.00 42.83 3.85
2111 2395 4.742201 CAGCCCACACTCCGTCGG 62.742 72.222 4.39 4.39 0.00 4.79
2112 2396 3.633094 CTCAGCCCACACTCCGTCG 62.633 68.421 0.00 0.00 0.00 5.12
2113 2397 2.262915 CTCAGCCCACACTCCGTC 59.737 66.667 0.00 0.00 0.00 4.79
2114 2398 3.314331 CCTCAGCCCACACTCCGT 61.314 66.667 0.00 0.00 0.00 4.69
2115 2399 4.767255 GCCTCAGCCCACACTCCG 62.767 72.222 0.00 0.00 0.00 4.63
2116 2400 3.325753 AGCCTCAGCCCACACTCC 61.326 66.667 0.00 0.00 41.25 3.85
2117 2401 2.046507 CAGCCTCAGCCCACACTC 60.047 66.667 0.00 0.00 41.25 3.51
2151 2435 1.506718 GACCAGAGCGATGACGTCA 59.493 57.895 22.48 22.48 41.98 4.35
2161 2445 0.678048 GGAACCACATGGACCAGAGC 60.678 60.000 4.53 0.00 38.94 4.09
2167 2451 3.140325 TCAGAAAGGAACCACATGGAC 57.860 47.619 4.53 0.00 38.94 4.02
2168 2452 4.622933 CGTATCAGAAAGGAACCACATGGA 60.623 45.833 4.53 0.00 38.94 3.41
2169 2453 3.623060 CGTATCAGAAAGGAACCACATGG 59.377 47.826 0.00 0.00 42.17 3.66
2170 2454 4.503910 TCGTATCAGAAAGGAACCACATG 58.496 43.478 0.00 0.00 0.00 3.21
2175 2459 3.557595 CAGCATCGTATCAGAAAGGAACC 59.442 47.826 0.00 0.00 0.00 3.62
2193 2477 3.258228 AATGCTCCACGAGGCAGCA 62.258 57.895 21.22 21.22 46.87 4.41
2197 2481 2.467826 GCTGAATGCTCCACGAGGC 61.468 63.158 0.00 0.00 38.95 4.70
2201 2485 3.120385 TGCGCTGAATGCTCCACG 61.120 61.111 9.73 0.00 40.11 4.94
2202 2486 2.482374 GTGCGCTGAATGCTCCAC 59.518 61.111 9.73 0.00 40.11 4.02
2208 2492 1.411394 CAAACTTGGTGCGCTGAATG 58.589 50.000 9.73 0.00 0.00 2.67
2210 2494 1.065600 GCAAACTTGGTGCGCTGAA 59.934 52.632 9.73 0.00 31.20 3.02
2234 2518 3.039011 TGCTAAGAAACTAGCTAGGGGG 58.961 50.000 24.35 8.33 43.96 5.40
2235 2519 3.707102 AGTGCTAAGAAACTAGCTAGGGG 59.293 47.826 24.35 1.06 43.96 4.79
2236 2520 4.688021 CAGTGCTAAGAAACTAGCTAGGG 58.312 47.826 24.35 1.84 43.96 3.53
2237 2521 4.116238 GCAGTGCTAAGAAACTAGCTAGG 58.884 47.826 24.35 6.16 43.96 3.02
2238 2522 4.564769 GTGCAGTGCTAAGAAACTAGCTAG 59.435 45.833 19.44 19.44 43.96 3.42
2239 2523 4.220821 AGTGCAGTGCTAAGAAACTAGCTA 59.779 41.667 17.60 0.00 43.96 3.32
2240 2524 3.007398 AGTGCAGTGCTAAGAAACTAGCT 59.993 43.478 17.60 0.00 43.96 3.32
2250 2534 3.469008 AACTACACAGTGCAGTGCTAA 57.531 42.857 21.57 5.84 43.23 3.09
2251 2535 3.305813 GGTAACTACACAGTGCAGTGCTA 60.306 47.826 21.57 9.99 43.23 3.49
2272 2556 9.449719 AGTTATATACACAAGGAAAAGTCAAGG 57.550 33.333 0.00 0.00 0.00 3.61
2296 2580 6.042208 ACCTCAGCAACTACTAAAAGAAGAGT 59.958 38.462 0.00 0.00 0.00 3.24
2301 2612 6.354130 ACAAACCTCAGCAACTACTAAAAGA 58.646 36.000 0.00 0.00 0.00 2.52
2349 2684 1.812686 TACCGTGCTGGCGACTCTTT 61.813 55.000 0.00 0.00 43.94 2.52
2350 2685 1.605058 ATACCGTGCTGGCGACTCTT 61.605 55.000 0.00 0.00 43.94 2.85
2351 2686 2.052690 ATACCGTGCTGGCGACTCT 61.053 57.895 0.00 0.00 43.94 3.24
2382 2717 6.421801 CAGTTTGGAAGCCATCTTTTAACTTG 59.578 38.462 0.00 0.00 31.36 3.16
2415 2750 4.650972 AAGTAGAAAACTACCATGCCCA 57.349 40.909 0.00 0.00 37.50 5.36
2416 2751 4.157840 CCAAAGTAGAAAACTACCATGCCC 59.842 45.833 0.00 0.00 37.50 5.36
2425 2760 5.071115 AGAGAGCTGACCAAAGTAGAAAACT 59.929 40.000 0.00 0.00 41.49 2.66
2461 2796 8.483743 AAAACGTGACAGTAATTTTAACATCG 57.516 30.769 0.00 0.00 0.00 3.84
2482 2818 0.741915 TGGGCGACAACCTGAAAAAC 59.258 50.000 0.00 0.00 0.00 2.43
2496 2832 0.817634 TTGTCCACAAGTCTTGGGCG 60.818 55.000 16.85 7.18 42.10 6.13
2503 2839 9.941664 CAAAATATATGAGATTGTCCACAAGTC 57.058 33.333 0.00 0.00 39.47 3.01
2513 2849 9.903682 GTCACCCAATCAAAATATATGAGATTG 57.096 33.333 18.76 18.76 43.04 2.67
2516 2852 7.720957 CCTGTCACCCAATCAAAATATATGAGA 59.279 37.037 0.00 0.00 0.00 3.27
2517 2853 7.503566 ACCTGTCACCCAATCAAAATATATGAG 59.496 37.037 0.00 0.00 0.00 2.90
2518 2854 7.353525 ACCTGTCACCCAATCAAAATATATGA 58.646 34.615 0.00 0.00 0.00 2.15
2519 2855 7.587037 ACCTGTCACCCAATCAAAATATATG 57.413 36.000 0.00 0.00 0.00 1.78
2520 2856 9.881773 ATAACCTGTCACCCAATCAAAATATAT 57.118 29.630 0.00 0.00 0.00 0.86
2522 2858 9.131791 GTATAACCTGTCACCCAATCAAAATAT 57.868 33.333 0.00 0.00 0.00 1.28
2523 2859 8.333235 AGTATAACCTGTCACCCAATCAAAATA 58.667 33.333 0.00 0.00 0.00 1.40
2524 2860 7.182060 AGTATAACCTGTCACCCAATCAAAAT 58.818 34.615 0.00 0.00 0.00 1.82
2525 2861 6.548321 AGTATAACCTGTCACCCAATCAAAA 58.452 36.000 0.00 0.00 0.00 2.44
2576 2912 7.039784 TGCCAAGTTCATGTTTTCTTTAGCTAT 60.040 33.333 0.00 0.00 0.00 2.97
2584 2932 5.596836 TTCTTGCCAAGTTCATGTTTTCT 57.403 34.783 4.04 0.00 0.00 2.52
2588 2936 5.058490 CCAATTTCTTGCCAAGTTCATGTT 58.942 37.500 4.04 0.00 0.00 2.71
2589 2937 4.344679 TCCAATTTCTTGCCAAGTTCATGT 59.655 37.500 4.04 0.00 0.00 3.21
2602 2950 8.451748 GCTCGTCTTATTTTACTCCAATTTCTT 58.548 33.333 0.00 0.00 0.00 2.52
2616 2964 3.555956 CGGCACAATAGCTCGTCTTATTT 59.444 43.478 0.00 0.00 34.17 1.40
2623 2971 0.037697 TCAACGGCACAATAGCTCGT 60.038 50.000 0.00 0.00 41.03 4.18
2624 2972 0.370273 GTCAACGGCACAATAGCTCG 59.630 55.000 0.00 0.00 35.37 5.03
2644 2992 5.160607 TGACGATAGAATGTTTCCCACTT 57.839 39.130 0.00 0.00 41.38 3.16
2645 2993 4.819105 TGACGATAGAATGTTTCCCACT 57.181 40.909 0.00 0.00 41.38 4.00
2657 3005 1.209261 TGGCCATTGCTTGACGATAGA 59.791 47.619 0.00 0.00 37.49 1.98
2658 3006 1.667236 TGGCCATTGCTTGACGATAG 58.333 50.000 0.00 0.00 39.22 2.08
2659 3007 1.948834 CATGGCCATTGCTTGACGATA 59.051 47.619 17.92 0.00 37.74 2.92
2668 3016 0.818938 TCACATCACATGGCCATTGC 59.181 50.000 17.92 0.00 33.60 3.56
2674 3022 2.035066 GGCCTAAATCACATCACATGGC 59.965 50.000 0.00 0.00 37.34 4.40
2680 3028 3.620488 GAACAGGGCCTAAATCACATCA 58.380 45.455 5.28 0.00 0.00 3.07
2684 3032 1.065709 TCCGAACAGGGCCTAAATCAC 60.066 52.381 5.28 0.00 41.52 3.06
2685 3033 1.209504 CTCCGAACAGGGCCTAAATCA 59.790 52.381 5.28 0.00 41.52 2.57
2686 3034 1.209747 ACTCCGAACAGGGCCTAAATC 59.790 52.381 5.28 3.85 41.52 2.17
2687 3035 1.209747 GACTCCGAACAGGGCCTAAAT 59.790 52.381 5.28 0.00 41.52 1.40
2688 3036 0.611714 GACTCCGAACAGGGCCTAAA 59.388 55.000 5.28 0.00 41.52 1.85
2689 3037 1.262640 GGACTCCGAACAGGGCCTAA 61.263 60.000 5.28 0.00 41.52 2.69
2690 3038 1.684734 GGACTCCGAACAGGGCCTA 60.685 63.158 5.28 0.00 41.52 3.93
2691 3039 3.003763 GGACTCCGAACAGGGCCT 61.004 66.667 0.00 0.00 41.52 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.