Multiple sequence alignment - TraesCS4A01G336900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G336900 chr4A 100.000 7523 0 0 697 8219 619278239 619285761 0.000000e+00 13893.0
1 TraesCS4A01G336900 chr4A 87.812 1280 98 20 2641 3901 627776974 627775734 0.000000e+00 1447.0
2 TraesCS4A01G336900 chr4A 100.000 266 0 0 1 266 619277543 619277808 7.410000e-135 492.0
3 TraesCS4A01G336900 chr4A 90.093 323 27 3 6634 6952 619284092 619284413 1.650000e-111 414.0
4 TraesCS4A01G336900 chr4A 90.093 323 27 3 6550 6871 619284176 619284494 1.650000e-111 414.0
5 TraesCS4A01G336900 chr4A 88.618 123 10 4 3865 3985 570916118 570916238 6.650000e-31 147.0
6 TraesCS4A01G336900 chr4A 89.362 94 7 2 1614 1704 619279054 619279147 1.870000e-21 115.0
7 TraesCS4A01G336900 chr4A 89.362 94 7 2 1512 1605 619279156 619279246 1.870000e-21 115.0
8 TraesCS4A01G336900 chr5D 93.829 4132 160 46 3983 8044 548365396 548369502 0.000000e+00 6130.0
9 TraesCS4A01G336900 chr5D 93.605 1642 78 11 2190 3826 548363750 548365369 0.000000e+00 2425.0
10 TraesCS4A01G336900 chr5D 86.443 1549 98 40 706 2186 548362096 548363600 0.000000e+00 1594.0
11 TraesCS4A01G336900 chr5D 88.138 1273 96 29 2641 3901 539962695 539961466 0.000000e+00 1463.0
12 TraesCS4A01G336900 chr5D 91.615 322 24 1 6550 6871 548368079 548368397 7.570000e-120 442.0
13 TraesCS4A01G336900 chr5D 91.331 323 23 3 6634 6952 548367995 548368316 3.520000e-118 436.0
14 TraesCS4A01G336900 chr5D 88.259 247 24 3 6545 6790 548368155 548368397 2.900000e-74 291.0
15 TraesCS4A01G336900 chr5D 90.426 94 6 2 1512 1605 548363026 548363116 4.030000e-23 121.0
16 TraesCS4A01G336900 chr5D 100.000 35 0 0 3866 3900 548365363 548365397 1.910000e-06 65.8
17 TraesCS4A01G336900 chr5D 95.122 41 2 0 7260 7300 548374946 548374986 1.910000e-06 65.8
18 TraesCS4A01G336900 chr5B 92.547 4146 193 61 3983 8044 692632646 692636759 0.000000e+00 5838.0
19 TraesCS4A01G336900 chr5B 92.147 1719 87 18 2190 3900 692630969 692632647 0.000000e+00 2383.0
20 TraesCS4A01G336900 chr5B 83.724 1536 128 52 697 2186 692629357 692630816 0.000000e+00 1339.0
21 TraesCS4A01G336900 chr5B 85.951 1025 89 27 2886 3901 682169291 682168313 0.000000e+00 1044.0
22 TraesCS4A01G336900 chr5B 91.304 322 25 1 6550 6871 692635326 692635644 3.520000e-118 436.0
23 TraesCS4A01G336900 chr5B 90.994 322 26 1 6634 6952 692635242 692635563 1.640000e-116 431.0
24 TraesCS4A01G336900 chr5B 87.898 314 24 8 3983 4286 682168315 682168006 2.820000e-94 357.0
25 TraesCS4A01G336900 chr5B 91.221 262 19 3 2641 2901 682169721 682169463 3.650000e-93 353.0
26 TraesCS4A01G336900 chr5B 88.664 247 23 3 6710 6952 692635237 692635482 6.240000e-76 296.0
27 TraesCS4A01G336900 chr5B 80.405 148 21 2 8072 8219 692636860 692636999 1.130000e-18 106.0
28 TraesCS4A01G336900 chr7A 95.556 90 4 0 3900 3989 184126824 184126735 2.390000e-30 145.0
29 TraesCS4A01G336900 chr7A 95.506 89 4 0 3897 3985 84015503 84015591 8.600000e-30 143.0
30 TraesCS4A01G336900 chr3B 95.556 90 4 0 3896 3985 658489056 658488967 2.390000e-30 145.0
31 TraesCS4A01G336900 chr1B 94.565 92 5 0 3895 3986 190886034 190885943 8.600000e-30 143.0
32 TraesCS4A01G336900 chr6A 94.565 92 4 1 3895 3985 121887925 121888016 3.090000e-29 141.0
33 TraesCS4A01G336900 chr4D 92.708 96 7 0 3898 3993 383775651 383775556 1.110000e-28 139.0
34 TraesCS4A01G336900 chr4B 92.000 100 7 1 3886 3985 91298412 91298314 1.110000e-28 139.0
35 TraesCS4A01G336900 chr6D 93.478 92 4 2 3895 3985 101231485 101231575 1.440000e-27 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G336900 chr4A 619277543 619285761 8218 False 7192.500000 13893 100.000000 1 8219 2 chr4A.!!$F2 8218
1 TraesCS4A01G336900 chr4A 627775734 627776974 1240 True 1447.000000 1447 87.812000 2641 3901 1 chr4A.!!$R1 1260
2 TraesCS4A01G336900 chr5D 539961466 539962695 1229 True 1463.000000 1463 88.138000 2641 3901 1 chr5D.!!$R1 1260
3 TraesCS4A01G336900 chr5D 548362096 548369502 7406 False 1438.100000 6130 91.938500 706 8044 8 chr5D.!!$F2 7338
4 TraesCS4A01G336900 chr5B 692629357 692636999 7642 False 1547.000000 5838 88.540714 697 8219 7 chr5B.!!$F1 7522
5 TraesCS4A01G336900 chr5B 682168006 682169721 1715 True 584.666667 1044 88.356667 2641 4286 3 chr5B.!!$R1 1645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.035317 ACGGATGCATCGCCACATAT 59.965 50.0 20.15 0.00 0.00 1.78 F
1155 1193 0.179084 ATCGCTCCATTACACACGGG 60.179 55.0 0.00 0.00 0.00 5.28 F
1567 1657 0.178995 TGGGTCTTGCATGCTTCACA 60.179 50.0 20.33 10.64 0.00 3.58 F
1986 2082 0.179056 CGTGTTTGTCCTGGTCCTGT 60.179 55.0 0.00 0.00 0.00 4.00 F
2491 2739 0.618458 GTGTCCATGCCTGTTCCCTA 59.382 55.0 0.00 0.00 0.00 3.53 F
2493 2741 0.912486 GTCCATGCCTGTTCCCTACT 59.088 55.0 0.00 0.00 0.00 2.57 F
3430 3890 1.059098 ACACATCAGAGGGACAAGCA 58.941 50.0 0.00 0.00 0.00 3.91 F
3914 4377 0.178926 TTTGTACTCCCTCCGTCCCA 60.179 55.0 0.00 0.00 0.00 4.37 F
3916 4379 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.0 0.00 0.00 0.00 3.28 F
5665 6163 0.704076 TCCCAAGCCCAAGCATTACT 59.296 50.0 0.00 0.00 43.56 2.24 F
6820 7318 0.390472 GGAAGAGAAGGTGGCTGTCG 60.390 60.0 0.00 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 1639 0.242017 GTGTGAAGCATGCAAGACCC 59.758 55.000 21.98 0.00 0.00 4.46 R
2610 2859 0.099436 GCTGCTAAGCGGGTCATTTG 59.901 55.000 0.00 0.00 40.27 2.32 R
2625 2874 0.322816 TGGAATGGAACCAGAGCTGC 60.323 55.000 0.00 0.00 33.22 5.25 R
3562 4024 0.806868 ATGAGCAACATGGAACTGCG 59.193 50.000 0.00 0.00 41.05 5.18 R
3902 4365 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20 R
3903 4366 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30 R
5196 5694 0.473501 TTGCCCCAAGCCCTCATTTT 60.474 50.000 0.00 0.00 42.71 1.82 R
5665 6163 1.217916 TCCCATTTGGCCTTCGGATA 58.782 50.000 3.32 0.00 0.00 2.59 R
5854 6352 1.707427 AGCATTCTTCCACCTGGTTCT 59.293 47.619 0.00 0.00 36.34 3.01 R
7182 7683 0.036105 ATGGCAGAGCAATGACGTCA 60.036 50.000 22.48 22.48 0.00 4.35 R
7875 8431 0.106708 TGCAGTGACTCTCCAACACC 59.893 55.000 0.00 0.00 35.47 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.598019 AACCCACTTAAAGCATGCATG 57.402 42.857 22.70 22.70 0.00 4.06
22 23 2.806434 ACCCACTTAAAGCATGCATGA 58.194 42.857 30.64 6.27 0.00 3.07
23 24 2.756760 ACCCACTTAAAGCATGCATGAG 59.243 45.455 30.64 19.35 0.00 2.90
24 25 2.480759 CCCACTTAAAGCATGCATGAGC 60.481 50.000 30.64 15.92 42.57 4.26
25 26 2.480759 CCACTTAAAGCATGCATGAGCC 60.481 50.000 30.64 12.65 41.13 4.70
26 27 2.426024 CACTTAAAGCATGCATGAGCCT 59.574 45.455 30.64 14.84 41.13 4.58
27 28 3.628942 CACTTAAAGCATGCATGAGCCTA 59.371 43.478 30.64 11.81 41.13 3.93
28 29 4.096833 CACTTAAAGCATGCATGAGCCTAA 59.903 41.667 30.64 17.69 41.13 2.69
29 30 4.706476 ACTTAAAGCATGCATGAGCCTAAA 59.294 37.500 30.64 13.69 41.13 1.85
30 31 3.795623 AAAGCATGCATGAGCCTAAAG 57.204 42.857 30.64 0.20 41.13 1.85
31 32 2.723322 AGCATGCATGAGCCTAAAGA 57.277 45.000 30.64 0.00 41.13 2.52
32 33 3.225177 AGCATGCATGAGCCTAAAGAT 57.775 42.857 30.64 0.00 41.13 2.40
33 34 3.147629 AGCATGCATGAGCCTAAAGATC 58.852 45.455 30.64 7.61 41.13 2.75
34 35 2.228343 GCATGCATGAGCCTAAAGATCC 59.772 50.000 30.64 3.61 41.13 3.36
35 36 2.245159 TGCATGAGCCTAAAGATCCG 57.755 50.000 0.00 0.00 41.13 4.18
36 37 1.202687 TGCATGAGCCTAAAGATCCGG 60.203 52.381 0.00 0.00 41.13 5.14
37 38 1.879796 GCATGAGCCTAAAGATCCGGG 60.880 57.143 0.00 0.00 33.58 5.73
38 39 1.694150 CATGAGCCTAAAGATCCGGGA 59.306 52.381 0.00 0.00 0.00 5.14
39 40 2.103153 TGAGCCTAAAGATCCGGGAT 57.897 50.000 9.85 9.85 0.00 3.85
40 41 2.408565 TGAGCCTAAAGATCCGGGATT 58.591 47.619 11.57 0.00 0.00 3.01
41 42 3.583228 TGAGCCTAAAGATCCGGGATTA 58.417 45.455 11.57 0.00 0.00 1.75
42 43 4.168101 TGAGCCTAAAGATCCGGGATTAT 58.832 43.478 11.57 0.14 0.00 1.28
43 44 4.597507 TGAGCCTAAAGATCCGGGATTATT 59.402 41.667 11.57 11.51 0.00 1.40
44 45 5.783360 TGAGCCTAAAGATCCGGGATTATTA 59.217 40.000 11.57 12.00 0.00 0.98
45 46 6.443849 TGAGCCTAAAGATCCGGGATTATTAT 59.556 38.462 11.57 0.01 0.00 1.28
46 47 6.890293 AGCCTAAAGATCCGGGATTATTATC 58.110 40.000 11.57 0.00 0.00 1.75
57 58 4.098914 GGATTATTATCCCAGCACACCA 57.901 45.455 0.00 0.00 43.98 4.17
58 59 4.074970 GGATTATTATCCCAGCACACCAG 58.925 47.826 0.00 0.00 43.98 4.00
59 60 2.638480 TATTATCCCAGCACACCAGC 57.362 50.000 0.00 0.00 0.00 4.85
60 61 0.625316 ATTATCCCAGCACACCAGCA 59.375 50.000 0.00 0.00 36.85 4.41
61 62 0.403655 TTATCCCAGCACACCAGCAA 59.596 50.000 0.00 0.00 36.85 3.91
62 63 0.625316 TATCCCAGCACACCAGCAAT 59.375 50.000 0.00 0.00 36.85 3.56
63 64 0.968901 ATCCCAGCACACCAGCAATG 60.969 55.000 0.00 0.00 36.85 2.82
64 65 2.642254 CCCAGCACACCAGCAATGG 61.642 63.158 0.00 0.00 36.85 3.16
65 66 2.260434 CAGCACACCAGCAATGGC 59.740 61.111 0.00 0.00 41.61 4.40
66 67 2.203523 AGCACACCAGCAATGGCA 60.204 55.556 0.00 0.00 44.61 4.92
67 68 2.048877 GCACACCAGCAATGGCAC 60.049 61.111 0.00 0.00 44.61 5.01
81 82 2.743636 TGGCACAAAACAAAAACGGA 57.256 40.000 0.00 0.00 31.92 4.69
82 83 3.252974 TGGCACAAAACAAAAACGGAT 57.747 38.095 0.00 0.00 31.92 4.18
83 84 2.932614 TGGCACAAAACAAAAACGGATG 59.067 40.909 0.00 0.00 31.92 3.51
84 85 2.286125 GGCACAAAACAAAAACGGATGC 60.286 45.455 0.00 0.00 0.00 3.91
85 86 2.349886 GCACAAAACAAAAACGGATGCA 59.650 40.909 0.00 0.00 0.00 3.96
86 87 3.002144 GCACAAAACAAAAACGGATGCAT 59.998 39.130 0.00 0.00 0.00 3.96
87 88 4.760683 CACAAAACAAAAACGGATGCATC 58.239 39.130 18.81 18.81 0.00 3.91
88 89 3.489047 ACAAAACAAAAACGGATGCATCG 59.511 39.130 20.15 16.86 0.00 3.84
89 90 1.696988 AACAAAAACGGATGCATCGC 58.303 45.000 20.15 12.11 0.00 4.58
90 91 0.109319 ACAAAAACGGATGCATCGCC 60.109 50.000 20.15 7.48 0.00 5.54
91 92 0.109365 CAAAAACGGATGCATCGCCA 60.109 50.000 20.15 0.00 0.00 5.69
92 93 0.109319 AAAAACGGATGCATCGCCAC 60.109 50.000 20.15 5.65 0.00 5.01
93 94 1.240641 AAAACGGATGCATCGCCACA 61.241 50.000 20.15 0.00 0.00 4.17
94 95 1.031571 AAACGGATGCATCGCCACAT 61.032 50.000 20.15 1.88 0.00 3.21
95 96 0.179059 AACGGATGCATCGCCACATA 60.179 50.000 20.15 0.00 0.00 2.29
96 97 0.035317 ACGGATGCATCGCCACATAT 59.965 50.000 20.15 0.00 0.00 1.78
97 98 1.159285 CGGATGCATCGCCACATATT 58.841 50.000 20.15 0.00 0.00 1.28
98 99 1.536766 CGGATGCATCGCCACATATTT 59.463 47.619 20.15 0.00 0.00 1.40
99 100 2.413239 CGGATGCATCGCCACATATTTC 60.413 50.000 20.15 1.17 0.00 2.17
100 101 2.095059 GGATGCATCGCCACATATTTCC 60.095 50.000 20.15 0.00 0.00 3.13
101 102 2.346766 TGCATCGCCACATATTTCCT 57.653 45.000 0.00 0.00 0.00 3.36
102 103 2.653726 TGCATCGCCACATATTTCCTT 58.346 42.857 0.00 0.00 0.00 3.36
103 104 2.358582 TGCATCGCCACATATTTCCTTG 59.641 45.455 0.00 0.00 0.00 3.61
104 105 2.618241 GCATCGCCACATATTTCCTTGA 59.382 45.455 0.00 0.00 0.00 3.02
105 106 3.254166 GCATCGCCACATATTTCCTTGAT 59.746 43.478 0.00 0.00 0.00 2.57
106 107 4.790878 CATCGCCACATATTTCCTTGATG 58.209 43.478 0.00 0.00 0.00 3.07
107 108 4.149511 TCGCCACATATTTCCTTGATGA 57.850 40.909 0.00 0.00 0.00 2.92
108 109 4.717877 TCGCCACATATTTCCTTGATGAT 58.282 39.130 0.00 0.00 0.00 2.45
109 110 5.863965 TCGCCACATATTTCCTTGATGATA 58.136 37.500 0.00 0.00 0.00 2.15
110 111 6.295249 TCGCCACATATTTCCTTGATGATAA 58.705 36.000 0.00 0.00 0.00 1.75
111 112 6.770303 TCGCCACATATTTCCTTGATGATAAA 59.230 34.615 0.00 0.00 0.00 1.40
112 113 7.448161 TCGCCACATATTTCCTTGATGATAAAT 59.552 33.333 0.00 0.00 0.00 1.40
113 114 8.729756 CGCCACATATTTCCTTGATGATAAATA 58.270 33.333 0.00 0.00 0.00 1.40
180 181 2.751166 AGTGTAGCACTTGTAGCAGG 57.249 50.000 0.00 0.00 42.59 4.85
181 182 2.248248 AGTGTAGCACTTGTAGCAGGA 58.752 47.619 0.00 0.00 42.59 3.86
182 183 2.232452 AGTGTAGCACTTGTAGCAGGAG 59.768 50.000 0.00 0.00 42.59 3.69
183 184 2.028930 GTGTAGCACTTGTAGCAGGAGT 60.029 50.000 0.00 0.00 0.00 3.85
184 185 3.192844 GTGTAGCACTTGTAGCAGGAGTA 59.807 47.826 0.00 0.00 0.00 2.59
185 186 3.444034 TGTAGCACTTGTAGCAGGAGTAG 59.556 47.826 0.00 0.00 0.00 2.57
186 187 1.205893 AGCACTTGTAGCAGGAGTAGC 59.794 52.381 0.00 0.00 0.00 3.58
187 188 1.066858 GCACTTGTAGCAGGAGTAGCA 60.067 52.381 0.00 0.00 0.00 3.49
188 189 2.612972 GCACTTGTAGCAGGAGTAGCAA 60.613 50.000 0.00 0.00 0.00 3.91
189 190 3.664107 CACTTGTAGCAGGAGTAGCAAA 58.336 45.455 0.00 0.00 0.00 3.68
190 191 3.681897 CACTTGTAGCAGGAGTAGCAAAG 59.318 47.826 0.00 0.00 0.00 2.77
191 192 3.578716 ACTTGTAGCAGGAGTAGCAAAGA 59.421 43.478 0.00 0.00 0.00 2.52
192 193 3.876274 TGTAGCAGGAGTAGCAAAGAG 57.124 47.619 0.00 0.00 0.00 2.85
193 194 3.165875 TGTAGCAGGAGTAGCAAAGAGT 58.834 45.455 0.00 0.00 0.00 3.24
194 195 4.341487 TGTAGCAGGAGTAGCAAAGAGTA 58.659 43.478 0.00 0.00 0.00 2.59
195 196 3.878160 AGCAGGAGTAGCAAAGAGTAC 57.122 47.619 0.00 0.00 0.00 2.73
196 197 3.165875 AGCAGGAGTAGCAAAGAGTACA 58.834 45.455 0.00 0.00 0.00 2.90
197 198 3.578716 AGCAGGAGTAGCAAAGAGTACAA 59.421 43.478 0.00 0.00 0.00 2.41
198 199 4.040461 AGCAGGAGTAGCAAAGAGTACAAA 59.960 41.667 0.00 0.00 0.00 2.83
199 200 4.938226 GCAGGAGTAGCAAAGAGTACAAAT 59.062 41.667 0.00 0.00 0.00 2.32
200 201 6.070767 AGCAGGAGTAGCAAAGAGTACAAATA 60.071 38.462 0.00 0.00 0.00 1.40
201 202 6.256757 GCAGGAGTAGCAAAGAGTACAAATAG 59.743 42.308 0.00 0.00 0.00 1.73
202 203 6.256757 CAGGAGTAGCAAAGAGTACAAATAGC 59.743 42.308 0.00 0.00 0.00 2.97
203 204 6.070767 AGGAGTAGCAAAGAGTACAAATAGCA 60.071 38.462 0.00 0.00 0.00 3.49
204 205 6.594159 GGAGTAGCAAAGAGTACAAATAGCAA 59.406 38.462 0.00 0.00 0.00 3.91
205 206 7.119262 GGAGTAGCAAAGAGTACAAATAGCAAA 59.881 37.037 0.00 0.00 0.00 3.68
206 207 7.807680 AGTAGCAAAGAGTACAAATAGCAAAC 58.192 34.615 0.00 0.00 0.00 2.93
207 208 6.013842 AGCAAAGAGTACAAATAGCAAACC 57.986 37.500 0.00 0.00 0.00 3.27
208 209 5.534654 AGCAAAGAGTACAAATAGCAAACCA 59.465 36.000 0.00 0.00 0.00 3.67
209 210 5.629435 GCAAAGAGTACAAATAGCAAACCAC 59.371 40.000 0.00 0.00 0.00 4.16
210 211 6.734137 CAAAGAGTACAAATAGCAAACCACA 58.266 36.000 0.00 0.00 0.00 4.17
211 212 6.952773 AAGAGTACAAATAGCAAACCACAA 57.047 33.333 0.00 0.00 0.00 3.33
212 213 6.560253 AGAGTACAAATAGCAAACCACAAG 57.440 37.500 0.00 0.00 0.00 3.16
213 214 6.296026 AGAGTACAAATAGCAAACCACAAGA 58.704 36.000 0.00 0.00 0.00 3.02
214 215 6.428159 AGAGTACAAATAGCAAACCACAAGAG 59.572 38.462 0.00 0.00 0.00 2.85
215 216 4.243007 ACAAATAGCAAACCACAAGAGC 57.757 40.909 0.00 0.00 0.00 4.09
216 217 3.636300 ACAAATAGCAAACCACAAGAGCA 59.364 39.130 0.00 0.00 0.00 4.26
217 218 4.281688 ACAAATAGCAAACCACAAGAGCAT 59.718 37.500 0.00 0.00 0.00 3.79
218 219 4.445452 AATAGCAAACCACAAGAGCATG 57.555 40.909 0.00 0.00 0.00 4.06
219 220 1.696063 AGCAAACCACAAGAGCATGT 58.304 45.000 0.00 0.00 0.00 3.21
220 221 1.610522 AGCAAACCACAAGAGCATGTC 59.389 47.619 0.00 0.00 0.00 3.06
221 222 1.336240 GCAAACCACAAGAGCATGTCC 60.336 52.381 0.00 0.00 0.00 4.02
222 223 1.955778 CAAACCACAAGAGCATGTCCA 59.044 47.619 0.00 0.00 0.00 4.02
223 224 1.609208 AACCACAAGAGCATGTCCAC 58.391 50.000 0.00 0.00 0.00 4.02
224 225 0.250901 ACCACAAGAGCATGTCCACC 60.251 55.000 0.00 0.00 0.00 4.61
225 226 0.250858 CCACAAGAGCATGTCCACCA 60.251 55.000 0.00 0.00 0.00 4.17
226 227 1.615116 CCACAAGAGCATGTCCACCAT 60.615 52.381 0.00 0.00 0.00 3.55
227 228 2.356022 CCACAAGAGCATGTCCACCATA 60.356 50.000 0.00 0.00 30.71 2.74
228 229 2.941064 CACAAGAGCATGTCCACCATAG 59.059 50.000 0.00 0.00 30.71 2.23
229 230 2.092753 ACAAGAGCATGTCCACCATAGG 60.093 50.000 0.00 0.00 30.71 2.57
230 231 1.885049 AGAGCATGTCCACCATAGGT 58.115 50.000 0.00 0.00 35.62 3.08
231 232 2.200081 AGAGCATGTCCACCATAGGTT 58.800 47.619 0.00 0.00 31.02 3.50
232 233 2.578021 AGAGCATGTCCACCATAGGTTT 59.422 45.455 0.00 0.00 31.02 3.27
233 234 2.684881 GAGCATGTCCACCATAGGTTTG 59.315 50.000 0.00 0.00 31.02 2.93
234 235 1.750778 GCATGTCCACCATAGGTTTGG 59.249 52.381 0.00 0.00 42.82 3.28
241 242 3.976704 CCATAGGTTTGGTCTGGCA 57.023 52.632 0.00 0.00 31.74 4.92
242 243 1.755179 CCATAGGTTTGGTCTGGCAG 58.245 55.000 8.58 8.58 31.74 4.85
243 244 1.683011 CCATAGGTTTGGTCTGGCAGG 60.683 57.143 15.73 0.00 31.74 4.85
244 245 1.004745 CATAGGTTTGGTCTGGCAGGT 59.995 52.381 15.73 0.00 0.00 4.00
245 246 0.400213 TAGGTTTGGTCTGGCAGGTG 59.600 55.000 15.73 0.00 0.00 4.00
246 247 1.903404 GGTTTGGTCTGGCAGGTGG 60.903 63.158 15.73 0.00 0.00 4.61
247 248 1.903404 GTTTGGTCTGGCAGGTGGG 60.903 63.158 15.73 0.00 0.00 4.61
248 249 3.808218 TTTGGTCTGGCAGGTGGGC 62.808 63.158 15.73 0.34 43.73 5.36
915 925 2.695970 CGGGAGGAGGAGAGGAGGT 61.696 68.421 0.00 0.00 0.00 3.85
916 926 1.231928 GGGAGGAGGAGAGGAGGTC 59.768 68.421 0.00 0.00 0.00 3.85
919 938 0.755327 GAGGAGGAGAGGAGGTCTGC 60.755 65.000 0.00 0.00 43.95 4.26
1011 1049 2.433145 CGTGCCATGTCTCGCTGT 60.433 61.111 0.00 0.00 0.00 4.40
1092 1130 1.371183 CCTGCTCGACAAGGTGGAA 59.629 57.895 1.11 0.00 0.00 3.53
1093 1131 0.951040 CCTGCTCGACAAGGTGGAAC 60.951 60.000 1.11 0.00 0.00 3.62
1132 1170 2.761465 CCCATCCCCTCTTGCTCCC 61.761 68.421 0.00 0.00 0.00 4.30
1148 1186 1.001406 CTCCCTCCATCGCTCCATTAC 59.999 57.143 0.00 0.00 0.00 1.89
1149 1187 0.758734 CCCTCCATCGCTCCATTACA 59.241 55.000 0.00 0.00 0.00 2.41
1151 1189 1.138859 CCTCCATCGCTCCATTACACA 59.861 52.381 0.00 0.00 0.00 3.72
1153 1191 0.930310 CCATCGCTCCATTACACACG 59.070 55.000 0.00 0.00 0.00 4.49
1154 1192 0.930310 CATCGCTCCATTACACACGG 59.070 55.000 0.00 0.00 0.00 4.94
1155 1193 0.179084 ATCGCTCCATTACACACGGG 60.179 55.000 0.00 0.00 0.00 5.28
1156 1194 1.216977 CGCTCCATTACACACGGGA 59.783 57.895 0.00 0.00 0.00 5.14
1158 1196 0.462047 GCTCCATTACACACGGGAGG 60.462 60.000 8.47 0.00 45.61 4.30
1182 1232 3.821033 GGGTTTCTAGAACATTGTGTGCT 59.179 43.478 4.18 0.00 40.07 4.40
1195 1245 0.734889 GTGTGCTGCCGCTATTTCAT 59.265 50.000 0.70 0.00 36.97 2.57
1196 1246 1.133025 GTGTGCTGCCGCTATTTCATT 59.867 47.619 0.70 0.00 36.97 2.57
1197 1247 1.132834 TGTGCTGCCGCTATTTCATTG 59.867 47.619 0.70 0.00 36.97 2.82
1198 1248 0.740149 TGCTGCCGCTATTTCATTGG 59.260 50.000 0.70 0.00 36.97 3.16
1222 1272 3.321682 TGGTTGCAGAAATTTCTTGGGAG 59.678 43.478 18.16 7.93 34.74 4.30
1227 1277 2.494870 CAGAAATTTCTTGGGAGCCAGG 59.505 50.000 18.16 0.00 34.74 4.45
1232 1282 2.044551 CTTGGGAGCCAGGCCTTC 60.045 66.667 8.22 0.00 33.81 3.46
1238 1294 4.093291 AGCCAGGCCTTCAGCTCG 62.093 66.667 14.60 0.00 43.05 5.03
1247 1303 0.599728 CCTTCAGCTCGCCTATCTGC 60.600 60.000 0.00 0.00 0.00 4.26
1273 1329 1.000145 GACTAGTTGCTTACGGCTGC 59.000 55.000 0.00 0.00 42.39 5.25
1276 1332 2.501223 TAGTTGCTTACGGCTGCGCT 62.501 55.000 9.73 0.00 42.39 5.92
1277 1333 2.098233 GTTGCTTACGGCTGCGCTA 61.098 57.895 9.73 0.00 42.39 4.26
1289 1345 2.095869 GGCTGCGCTATGATGAATCTTG 60.096 50.000 9.73 0.00 0.00 3.02
1293 1349 2.608467 GCTATGATGAATCTTGGCGC 57.392 50.000 0.00 0.00 31.08 6.53
1295 1351 2.497138 CTATGATGAATCTTGGCGCCA 58.503 47.619 29.03 29.03 0.00 5.69
1325 1382 0.759959 TTGGGTTAGGTCACTCGCAA 59.240 50.000 0.00 0.00 0.00 4.85
1327 1384 1.019805 GGGTTAGGTCACTCGCAAGC 61.020 60.000 0.00 0.00 37.18 4.01
1344 1419 4.169696 CGCTATGCCCGGGGTTCA 62.170 66.667 25.28 12.82 0.00 3.18
1345 1420 2.515901 GCTATGCCCGGGGTTCAT 59.484 61.111 25.28 19.46 0.00 2.57
1347 1422 1.455383 GCTATGCCCGGGGTTCATTG 61.455 60.000 25.28 18.25 0.00 2.82
1372 1458 5.592282 CACTGATTGGTAGAGAAGCTAGAGA 59.408 44.000 0.00 0.00 0.00 3.10
1388 1478 3.971245 AGAGAACAAAGTAGGGCTGAG 57.029 47.619 0.00 0.00 0.00 3.35
1408 1498 2.649816 AGCCCATGGTTTCCTAAAGAGT 59.350 45.455 11.73 0.00 0.00 3.24
1441 1531 3.385755 GCAAATTGAACCTGATAGGGCAT 59.614 43.478 0.00 0.00 40.58 4.40
1465 1555 2.366787 GATCTTGCGGCTAGTTGCGC 62.367 60.000 11.06 0.00 44.05 6.09
1485 1575 2.629656 CGCAAGGTGGGGCTTTCTG 61.630 63.158 0.00 0.00 0.00 3.02
1486 1576 2.935740 GCAAGGTGGGGCTTTCTGC 61.936 63.158 0.00 0.00 41.94 4.26
1497 1587 1.372087 GCTTTCTGCTGGGTGGATCG 61.372 60.000 0.00 0.00 38.95 3.69
1507 1597 0.837272 GGGTGGATCGATGGGAGAAA 59.163 55.000 0.54 0.00 0.00 2.52
1509 1599 1.486726 GGTGGATCGATGGGAGAAAGT 59.513 52.381 0.54 0.00 0.00 2.66
1518 1608 0.539986 TGGGAGAAAGTATGCGGGTC 59.460 55.000 0.00 0.00 0.00 4.46
1527 1617 2.029623 AGTATGCGGGTCTATGTCGTT 58.970 47.619 0.00 0.00 0.00 3.85
1549 1639 6.624917 CGTTACTCATTGATTATTGTCGCTTG 59.375 38.462 0.00 0.00 0.00 4.01
1567 1657 0.178995 TGGGTCTTGCATGCTTCACA 60.179 50.000 20.33 10.64 0.00 3.58
1568 1658 0.242017 GGGTCTTGCATGCTTCACAC 59.758 55.000 20.33 9.51 0.00 3.82
1569 1659 0.953727 GGTCTTGCATGCTTCACACA 59.046 50.000 20.33 0.00 0.00 3.72
1572 1662 2.033801 GTCTTGCATGCTTCACACAAGT 59.966 45.455 20.33 0.00 38.99 3.16
1668 1758 2.751806 GCTTAGGTCTTGCAAGCTTCAT 59.248 45.455 21.99 13.64 41.14 2.57
1708 1801 1.217882 AGCGCATTTAGTATGTCGCC 58.782 50.000 11.47 5.89 41.66 5.54
1779 1873 8.419076 AAAGACGCAAATGTTTCTAATTTGTT 57.581 26.923 9.80 0.00 43.72 2.83
1820 1914 4.912766 GTGACTGAAGTTCTAGAGACGTTG 59.087 45.833 4.17 0.00 0.00 4.10
1843 1937 1.302033 CCGCTAGCTATTGCCAGGG 60.302 63.158 13.93 4.89 39.69 4.45
1890 1985 6.587273 ACTACTTTCTGCAAATATCCTCCTC 58.413 40.000 0.00 0.00 0.00 3.71
1934 2029 2.884639 GCACTAAACTGGTTGACCACAT 59.115 45.455 0.00 0.00 42.01 3.21
1935 2030 3.304659 GCACTAAACTGGTTGACCACATG 60.305 47.826 0.00 0.00 42.01 3.21
1970 2066 9.180678 GAATATTATTTTTCTATGCAACCCGTG 57.819 33.333 0.00 0.00 0.00 4.94
1972 2068 4.864704 ATTTTTCTATGCAACCCGTGTT 57.135 36.364 0.00 0.00 34.14 3.32
1986 2082 0.179056 CGTGTTTGTCCTGGTCCTGT 60.179 55.000 0.00 0.00 0.00 4.00
1987 2083 1.308998 GTGTTTGTCCTGGTCCTGTG 58.691 55.000 0.00 0.00 0.00 3.66
2005 2102 4.003648 CTGTGGGAGTTACCATCAGTTTC 58.996 47.826 0.00 0.00 43.59 2.78
2059 2156 5.576774 CGTGCAAGTATGAATCACTTAGTCA 59.423 40.000 0.00 0.00 36.47 3.41
2063 2160 5.283457 AGTATGAATCACTTAGTCAGGGC 57.717 43.478 0.00 0.00 35.29 5.19
2069 2166 1.623811 TCACTTAGTCAGGGCAAGTCC 59.376 52.381 0.00 0.00 30.20 3.85
2092 2189 4.898829 TGACCACACTGATGAAACAAAG 57.101 40.909 0.00 0.00 0.00 2.77
2113 2210 2.396590 TTCCTAATTGCCGGTCTCAC 57.603 50.000 1.90 0.00 0.00 3.51
2118 2215 0.951558 AATTGCCGGTCTCACACAAC 59.048 50.000 1.90 0.00 0.00 3.32
2133 2230 5.981174 TCACACAACGTGTTCTAAATAAGC 58.019 37.500 0.00 0.00 45.08 3.09
2148 2245 5.540400 AAATAAGCGGTACCTATGCTGTA 57.460 39.130 12.82 8.42 39.30 2.74
2186 2283 3.555168 GGTGGATTGGATCGATGTAGGAC 60.555 52.174 0.54 0.00 0.00 3.85
2187 2284 3.069586 GTGGATTGGATCGATGTAGGACA 59.930 47.826 0.54 0.00 0.00 4.02
2188 2285 3.069586 TGGATTGGATCGATGTAGGACAC 59.930 47.826 0.54 0.00 0.00 3.67
2248 2496 2.298729 TGGTGTAGCCCTTTTCAATTGC 59.701 45.455 0.00 0.00 36.04 3.56
2338 2586 5.428253 TCAGAACTTGGGAATACAGCATAC 58.572 41.667 0.00 0.00 0.00 2.39
2358 2606 2.234908 ACGTGCAAAAGAGAGCCTCTAT 59.765 45.455 0.00 0.00 40.28 1.98
2482 2730 2.627945 TCGTCTTTATGTGTCCATGCC 58.372 47.619 0.00 0.00 32.29 4.40
2491 2739 0.618458 GTGTCCATGCCTGTTCCCTA 59.382 55.000 0.00 0.00 0.00 3.53
2493 2741 0.912486 GTCCATGCCTGTTCCCTACT 59.088 55.000 0.00 0.00 0.00 2.57
2494 2742 1.282157 GTCCATGCCTGTTCCCTACTT 59.718 52.381 0.00 0.00 0.00 2.24
2495 2743 1.559682 TCCATGCCTGTTCCCTACTTC 59.440 52.381 0.00 0.00 0.00 3.01
2496 2744 1.281867 CCATGCCTGTTCCCTACTTCA 59.718 52.381 0.00 0.00 0.00 3.02
2497 2745 2.290896 CCATGCCTGTTCCCTACTTCAA 60.291 50.000 0.00 0.00 0.00 2.69
2498 2746 2.859165 TGCCTGTTCCCTACTTCAAG 57.141 50.000 0.00 0.00 0.00 3.02
2584 2832 3.429492 TGCCAATAGTTTGCTGGATTGA 58.571 40.909 0.00 0.00 32.16 2.57
2610 2859 6.032094 CCATCAGTTGCAATTTATCTGTGTC 58.968 40.000 0.59 0.00 0.00 3.67
2625 2874 2.416547 CTGTGTCAAATGACCCGCTTAG 59.583 50.000 10.83 0.00 44.15 2.18
2764 3013 5.824624 TGATTCATCTGTCTGCTTATTTCCC 59.175 40.000 0.00 0.00 0.00 3.97
2858 3109 7.602753 AGAAAACATAAATACCTTGGCAGTTC 58.397 34.615 0.00 0.00 0.00 3.01
3076 3530 3.685139 TCCACTGTTAGAAAGCTGAGG 57.315 47.619 0.00 0.00 0.00 3.86
3108 3562 7.439157 TTCATTATTGTGACCTGAACTCTTG 57.561 36.000 0.00 0.00 0.00 3.02
3184 3638 4.412796 GTCTTCTGACATCATCATGGGA 57.587 45.455 0.00 0.00 42.48 4.37
3185 3639 4.970711 GTCTTCTGACATCATCATGGGAT 58.029 43.478 0.00 0.00 42.48 3.85
3186 3640 5.374921 GTCTTCTGACATCATCATGGGATT 58.625 41.667 0.00 0.00 42.48 3.01
3187 3641 6.528321 GTCTTCTGACATCATCATGGGATTA 58.472 40.000 0.00 0.00 42.48 1.75
3188 3642 6.994496 GTCTTCTGACATCATCATGGGATTAA 59.006 38.462 0.00 0.00 42.48 1.40
3231 3689 8.450578 AACTGAACTCATGTTATGTTTCTGAA 57.549 30.769 13.78 0.00 36.39 3.02
3362 3822 9.466497 ACTGTAACTTCATGAATGGATATGTTT 57.534 29.630 8.96 0.00 0.00 2.83
3430 3890 1.059098 ACACATCAGAGGGACAAGCA 58.941 50.000 0.00 0.00 0.00 3.91
3542 4004 3.756933 ATGTTTTTGCCTGCAATCTGT 57.243 38.095 5.25 0.00 35.70 3.41
3551 4013 4.081406 TGCCTGCAATCTGTGTTATCTTT 58.919 39.130 0.00 0.00 0.00 2.52
3562 4024 9.614792 AATCTGTGTTATCTTTATGTACCCTTC 57.385 33.333 0.00 0.00 0.00 3.46
3564 4026 5.813672 TGTGTTATCTTTATGTACCCTTCGC 59.186 40.000 0.00 0.00 0.00 4.70
3768 4231 4.217118 GCCCTCATAGAACATGGCAATAAG 59.783 45.833 0.00 0.00 38.73 1.73
3813 4276 1.863454 CATGTCCTTAGAGTGCATCGC 59.137 52.381 0.00 0.00 0.00 4.58
3825 4288 1.994779 GTGCATCGCAGGGAATTTTTG 59.005 47.619 0.00 0.00 40.08 2.44
3901 4364 7.822822 ACCTGAGGTGTTATGTTAGATTTGTAC 59.177 37.037 1.77 0.00 32.98 2.90
3902 4365 8.041323 CCTGAGGTGTTATGTTAGATTTGTACT 58.959 37.037 0.00 0.00 0.00 2.73
3903 4366 8.997621 TGAGGTGTTATGTTAGATTTGTACTC 57.002 34.615 0.00 0.00 0.00 2.59
3904 4367 8.038944 TGAGGTGTTATGTTAGATTTGTACTCC 58.961 37.037 0.00 0.00 0.00 3.85
3905 4368 7.336396 AGGTGTTATGTTAGATTTGTACTCCC 58.664 38.462 0.00 0.00 0.00 4.30
3906 4369 7.182206 AGGTGTTATGTTAGATTTGTACTCCCT 59.818 37.037 0.00 0.00 0.00 4.20
3907 4370 7.494952 GGTGTTATGTTAGATTTGTACTCCCTC 59.505 40.741 0.00 0.00 0.00 4.30
3908 4371 7.494952 GTGTTATGTTAGATTTGTACTCCCTCC 59.505 40.741 0.00 0.00 0.00 4.30
3909 4372 4.730949 TGTTAGATTTGTACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
3910 4373 4.091549 TGTTAGATTTGTACTCCCTCCGT 58.908 43.478 0.00 0.00 0.00 4.69
3911 4374 4.159135 TGTTAGATTTGTACTCCCTCCGTC 59.841 45.833 0.00 0.00 0.00 4.79
3912 4375 2.108970 AGATTTGTACTCCCTCCGTCC 58.891 52.381 0.00 0.00 0.00 4.79
3913 4376 1.138464 GATTTGTACTCCCTCCGTCCC 59.862 57.143 0.00 0.00 0.00 4.46
3914 4377 0.178926 TTTGTACTCCCTCCGTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
3915 4378 0.178926 TTGTACTCCCTCCGTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
3916 4379 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
3917 4380 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
3918 4381 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
3919 4382 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3920 4383 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3921 4384 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3922 4385 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3923 4386 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3924 4387 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
3925 4388 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
3926 4389 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3927 4390 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
3928 4391 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
3929 4392 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3930 4393 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3931 4394 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
3932 4395 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
3933 4396 6.238648 CGTCCCAAAATAAGTGACTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
3934 4397 6.918022 GTCCCAAAATAAGTGACTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
3935 4398 6.605594 TCCCAAAATAAGTGACTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
3936 4399 7.776030 TCCCAAAATAAGTGACTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
3937 4400 7.860872 CCCAAAATAAGTGACTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
3938 4401 8.621286 CCAAAATAAGTGACTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
3944 4407 8.788325 AAGTGACTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
3945 4408 9.880157 AAGTGACTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
3946 4409 9.530633 AGTGACTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
3947 4410 9.310716 GTGACTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
3974 4437 9.758651 ACAAAGTTGATTTACTTATTTTGGGAC 57.241 29.630 0.00 0.00 37.37 4.46
3975 4438 9.757227 CAAAGTTGATTTACTTATTTTGGGACA 57.243 29.630 0.00 0.00 37.37 4.02
3976 4439 9.981114 AAAGTTGATTTACTTATTTTGGGACAG 57.019 29.630 0.00 0.00 37.17 3.51
3977 4440 8.934023 AGTTGATTTACTTATTTTGGGACAGA 57.066 30.769 0.00 0.00 42.39 3.41
3978 4441 9.014297 AGTTGATTTACTTATTTTGGGACAGAG 57.986 33.333 0.00 0.00 42.39 3.35
3979 4442 7.938140 TGATTTACTTATTTTGGGACAGAGG 57.062 36.000 0.00 0.00 42.39 3.69
3980 4443 6.889722 TGATTTACTTATTTTGGGACAGAGGG 59.110 38.462 0.00 0.00 42.39 4.30
3981 4444 6.457159 TTTACTTATTTTGGGACAGAGGGA 57.543 37.500 0.00 0.00 42.39 4.20
3982 4445 4.576330 ACTTATTTTGGGACAGAGGGAG 57.424 45.455 0.00 0.00 42.39 4.30
3983 4446 3.916989 ACTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
3984 4447 5.098663 ACTTATTTTGGGACAGAGGGAGTA 58.901 41.667 0.00 0.00 42.39 2.59
3985 4448 5.189934 ACTTATTTTGGGACAGAGGGAGTAG 59.810 44.000 0.00 0.00 42.39 2.57
3986 4449 3.269592 TTTTGGGACAGAGGGAGTAGA 57.730 47.619 0.00 0.00 42.39 2.59
3990 4453 4.834406 TGGGACAGAGGGAGTAGAATAT 57.166 45.455 0.00 0.00 0.00 1.28
4029 4502 7.951347 AGCTTATTTCTTTCCTCATGATTGT 57.049 32.000 0.00 0.00 0.00 2.71
4047 4520 8.554528 CATGATTGTCTAAAGTACTGGCTTATG 58.445 37.037 0.00 0.00 0.00 1.90
4101 4574 1.737793 GTCCATAACAAGGCTGTTCCG 59.262 52.381 5.75 0.58 42.25 4.30
4127 4600 4.864704 ACATGTTTAAATGTGGGGTGAC 57.135 40.909 0.00 0.00 39.32 3.67
4305 4783 6.923508 GTGGTTAGTATCAAAGCAAAAGCTTT 59.076 34.615 5.69 5.69 40.19 3.51
4341 4819 3.169355 AGTACTATTACCGGGTTTGCG 57.831 47.619 4.31 0.00 0.00 4.85
4612 5092 9.249457 AGTGATGTGTCGTAGATGTTTATATTG 57.751 33.333 0.00 0.00 40.67 1.90
4616 5096 6.989759 TGTGTCGTAGATGTTTATATTGGCAT 59.010 34.615 0.00 0.00 40.67 4.40
4646 5126 7.439157 TTCTGGTAGATCAACAAACTCATTG 57.561 36.000 0.00 0.00 44.95 2.82
4658 5139 4.981776 CAAACTCATTGTTTTTCTTCGCG 58.018 39.130 0.00 0.00 45.69 5.87
4690 5171 6.148948 TGGACTGTTCTTTGCAAAATATTCG 58.851 36.000 13.84 0.21 0.00 3.34
4693 5174 7.358352 GGACTGTTCTTTGCAAAATATTCGTTG 60.358 37.037 13.84 0.00 0.00 4.10
4724 5222 8.303876 TGTTTTATTCTTATGTTTGGCCTCTTC 58.696 33.333 3.32 0.00 0.00 2.87
4732 5230 4.385358 TGTTTGGCCTCTTCTTTTGAAC 57.615 40.909 3.32 0.00 34.31 3.18
4742 5240 6.863645 GCCTCTTCTTTTGAACTTTATTGACC 59.136 38.462 0.00 0.00 34.31 4.02
4745 5243 7.940850 TCTTCTTTTGAACTTTATTGACCTGG 58.059 34.615 0.00 0.00 34.31 4.45
4891 5389 5.936956 AGATCGAAAAGAGAAGCACAAAGAT 59.063 36.000 0.00 0.00 0.00 2.40
4942 5440 2.573462 CAGGGAATCTGAAGGGACTGAA 59.427 50.000 0.00 0.00 46.18 3.02
4977 5475 3.495100 GCTCTCCTTGGTCAGAAGTTTGA 60.495 47.826 0.00 0.00 0.00 2.69
4984 5482 5.359194 TTGGTCAGAAGTTTGAAGAGAGT 57.641 39.130 0.00 0.00 0.00 3.24
4993 5491 5.146010 AGTTTGAAGAGAGTAGCAGGAAG 57.854 43.478 0.00 0.00 0.00 3.46
5152 5650 2.306805 TGCATTGGAGAATGACAGGACT 59.693 45.455 0.00 0.00 41.49 3.85
5196 5694 6.053632 TCACTCTATTGATGCTTCAAGGAA 57.946 37.500 18.58 7.61 44.75 3.36
5199 5697 7.448161 TCACTCTATTGATGCTTCAAGGAAAAA 59.552 33.333 18.58 6.55 44.75 1.94
5273 5771 0.798771 GATTCGACGCAGCGAGAACT 60.799 55.000 24.65 14.81 41.79 3.01
5315 5813 3.133721 AGGCTCTGATGGCTTTAGTACAG 59.866 47.826 0.00 0.00 40.00 2.74
5350 5848 5.817816 GGAGAAAGAAAGAGTCAAAGTCACA 59.182 40.000 0.00 0.00 0.00 3.58
5519 6017 1.119684 TCGAAGCCCTGCTAATGCTA 58.880 50.000 0.00 0.00 38.25 3.49
5526 6024 1.878088 CCCTGCTAATGCTATGCACAG 59.122 52.381 0.00 0.00 43.04 3.66
5605 6103 3.176411 TGAGAGTCCATCAACATCTGGT 58.824 45.455 0.00 0.00 34.03 4.00
5665 6163 0.704076 TCCCAAGCCCAAGCATTACT 59.296 50.000 0.00 0.00 43.56 2.24
5717 6215 5.395103 CCAACTGAAAACTTGTCCATTTCCA 60.395 40.000 0.00 0.00 33.23 3.53
5854 6352 0.752054 CAGCTGTGGGCAAGGAAAAA 59.248 50.000 5.25 0.00 44.79 1.94
5870 6368 3.958147 GGAAAAAGAACCAGGTGGAAGAA 59.042 43.478 2.10 0.00 38.94 2.52
6070 6568 7.766283 AGAAACACAAAGAGAAGAAAAAGGAG 58.234 34.615 0.00 0.00 0.00 3.69
6090 6588 2.571202 AGAAGGAGGCAAAGAAGGAGAG 59.429 50.000 0.00 0.00 0.00 3.20
6326 6824 6.836577 TGCTTTTTATTTTGCACTTACCAC 57.163 33.333 0.00 0.00 0.00 4.16
6337 6835 3.876914 TGCACTTACCACTATTGCATAGC 59.123 43.478 0.00 0.00 38.25 2.97
6391 6889 7.552687 TGGTGCTTTATGTTATAAGACTTCTGG 59.447 37.037 0.00 0.00 0.00 3.86
6622 7120 1.757118 TCGATTCAGGGCTTCGAGATT 59.243 47.619 0.00 0.00 37.01 2.40
6675 7173 0.886563 GCAACAAGGAAGCTCAGCAT 59.113 50.000 0.00 0.00 0.00 3.79
6814 7312 2.290577 CCCAAGAAGGAAGAGAAGGTGG 60.291 54.545 0.00 0.00 41.22 4.61
6820 7318 0.390472 GGAAGAGAAGGTGGCTGTCG 60.390 60.000 0.00 0.00 0.00 4.35
6929 7427 4.687215 TCAGCAGCGACCTGTGGC 62.687 66.667 0.00 0.00 41.26 5.01
6979 7480 1.344953 ATCTGGGAATGGCGCACCTA 61.345 55.000 10.83 3.85 35.39 3.08
6990 7491 0.815734 GCGCACCTACTAGGAAGTCA 59.184 55.000 9.28 0.00 37.67 3.41
6999 7500 1.149288 ACTAGGAAGTCACCTCACCCA 59.851 52.381 0.00 0.00 41.00 4.51
7035 7536 1.065126 GGGCAGATATACAGCATCCCC 60.065 57.143 0.00 0.00 32.56 4.81
7059 7560 1.209019 GCACCTCAGATCATGGAGTGT 59.791 52.381 0.00 0.00 35.78 3.55
7068 7569 3.706594 AGATCATGGAGTGTGATTACGGT 59.293 43.478 0.00 0.00 36.49 4.83
7071 7572 3.450817 TCATGGAGTGTGATTACGGTGAT 59.549 43.478 0.00 0.00 0.00 3.06
7089 7590 0.534412 ATCAGGACTGGCTGTTCGAG 59.466 55.000 0.00 0.00 0.00 4.04
7114 7615 2.045536 GCACCCAGCCAGAGAAGG 60.046 66.667 0.00 0.00 37.23 3.46
7128 7629 0.915364 AGAAGGCCAAGATGGAGACC 59.085 55.000 5.01 0.00 40.96 3.85
7182 7683 1.810412 GCTATGAAAATCGACCCGGCT 60.810 52.381 0.00 0.00 0.00 5.52
7191 7692 2.264794 GACCCGGCTGACGTCATT 59.735 61.111 20.40 0.00 42.24 2.57
7226 7727 6.982852 ACGTCATTCCTTTCTGATACGATAT 58.017 36.000 0.00 0.00 0.00 1.63
7232 7733 6.345096 TCCTTTCTGATACGATATGATGCA 57.655 37.500 0.00 0.00 0.00 3.96
7260 7764 3.839293 ACTACTGAGCAAAGATCGTGTC 58.161 45.455 2.03 0.38 0.00 3.67
7320 7824 5.859495 AGTTTCTACTTTCTAGCACTGCTT 58.141 37.500 9.30 0.00 40.44 3.91
7321 7825 5.929415 AGTTTCTACTTTCTAGCACTGCTTC 59.071 40.000 9.30 0.00 40.44 3.86
7322 7826 5.730296 TTCTACTTTCTAGCACTGCTTCT 57.270 39.130 9.30 0.00 40.44 2.85
7428 7936 0.321021 ACTTGTGAGAGAGCTGGCAG 59.679 55.000 10.94 10.94 0.00 4.85
7430 7938 1.123861 TTGTGAGAGAGCTGGCAGGT 61.124 55.000 20.74 20.74 0.00 4.00
7431 7939 1.079266 GTGAGAGAGCTGGCAGGTG 60.079 63.158 25.83 0.00 0.00 4.00
7433 7941 0.251787 TGAGAGAGCTGGCAGGTGTA 60.252 55.000 25.83 1.81 0.00 2.90
7486 8003 4.013728 CCGGAGAAGAAGAGAAGAGAAGA 58.986 47.826 0.00 0.00 0.00 2.87
7512 8029 3.289062 TCTGTTGGTCGTCGCCGA 61.289 61.111 0.00 0.00 41.73 5.54
7513 8030 2.126071 CTGTTGGTCGTCGCCGAT 60.126 61.111 0.00 0.00 46.30 4.18
7514 8031 2.126228 TGTTGGTCGTCGCCGATC 60.126 61.111 0.00 0.00 46.30 3.69
7516 8033 3.066190 TTGGTCGTCGCCGATCCT 61.066 61.111 0.00 0.00 46.30 3.24
7517 8034 3.350909 TTGGTCGTCGCCGATCCTG 62.351 63.158 0.00 0.00 46.30 3.86
7639 8180 6.427441 ACATGTACATTAGAGAGACAGGAGA 58.573 40.000 5.37 0.00 0.00 3.71
7641 8182 7.068103 ACATGTACATTAGAGAGACAGGAGAAG 59.932 40.741 5.37 0.00 0.00 2.85
7642 8183 5.888724 TGTACATTAGAGAGACAGGAGAAGG 59.111 44.000 0.00 0.00 0.00 3.46
7653 8194 0.556380 AGGAGAAGGGGAGAGGGAGA 60.556 60.000 0.00 0.00 0.00 3.71
7654 8195 0.340208 GGAGAAGGGGAGAGGGAGAA 59.660 60.000 0.00 0.00 0.00 2.87
7655 8196 1.691163 GGAGAAGGGGAGAGGGAGAAG 60.691 61.905 0.00 0.00 0.00 2.85
7656 8197 1.289530 GAGAAGGGGAGAGGGAGAAGA 59.710 57.143 0.00 0.00 0.00 2.87
7657 8198 1.290732 AGAAGGGGAGAGGGAGAAGAG 59.709 57.143 0.00 0.00 0.00 2.85
7658 8199 0.341609 AAGGGGAGAGGGAGAAGAGG 59.658 60.000 0.00 0.00 0.00 3.69
7659 8200 0.556380 AGGGGAGAGGGAGAAGAGGA 60.556 60.000 0.00 0.00 0.00 3.71
7660 8201 0.340208 GGGGAGAGGGAGAAGAGGAA 59.660 60.000 0.00 0.00 0.00 3.36
7772 8320 4.706476 TGCCTGATTTATTCTTGTTCCCAG 59.294 41.667 0.00 0.00 0.00 4.45
7786 8334 1.003355 CCCAGAGTTGGCATGTCGT 60.003 57.895 0.00 0.00 43.58 4.34
7805 8353 8.540492 CATGTCGTTTTGTGTATATAACTCTCC 58.460 37.037 0.00 0.00 0.00 3.71
7806 8354 7.833786 TGTCGTTTTGTGTATATAACTCTCCT 58.166 34.615 0.00 0.00 0.00 3.69
7872 8428 1.869132 GAGGTTTTGTAACGAACGCCT 59.131 47.619 0.00 0.00 35.00 5.52
7873 8429 2.288729 GAGGTTTTGTAACGAACGCCTT 59.711 45.455 0.00 0.00 35.00 4.35
7875 8431 2.784928 GGTTTTGTAACGAACGCCTTTG 59.215 45.455 0.00 0.00 35.00 2.77
7897 8454 0.952984 GTTGGAGAGTCACTGCAGGC 60.953 60.000 19.93 7.87 46.77 4.85
7898 8455 1.410050 TTGGAGAGTCACTGCAGGCA 61.410 55.000 19.93 0.00 46.77 4.75
7899 8456 3.316366 TTGGAGAGTCACTGCAGGCAG 62.316 57.143 19.93 19.11 46.77 4.85
7902 8459 2.851102 AGTCACTGCAGGCAGGGT 60.851 61.111 21.81 2.07 46.80 4.34
7903 8460 1.536418 AGTCACTGCAGGCAGGGTA 60.536 57.895 21.81 7.40 46.80 3.69
7904 8461 0.911525 AGTCACTGCAGGCAGGGTAT 60.912 55.000 21.81 9.95 46.80 2.73
7905 8462 0.745845 GTCACTGCAGGCAGGGTATG 60.746 60.000 21.81 12.38 46.80 2.39
7906 8463 0.909133 TCACTGCAGGCAGGGTATGA 60.909 55.000 21.81 14.35 46.80 2.15
7908 8465 1.147824 CTGCAGGCAGGGTATGAGG 59.852 63.158 13.39 0.00 40.17 3.86
7909 8466 2.203266 GCAGGCAGGGTATGAGGC 60.203 66.667 0.00 0.00 0.00 4.70
7911 8468 1.918253 CAGGCAGGGTATGAGGCTT 59.082 57.895 0.00 0.00 35.85 4.35
7912 8469 0.465097 CAGGCAGGGTATGAGGCTTG 60.465 60.000 0.00 0.00 35.85 4.01
7913 8470 0.621571 AGGCAGGGTATGAGGCTTGA 60.622 55.000 0.00 0.00 34.14 3.02
7914 8471 0.475906 GGCAGGGTATGAGGCTTGAT 59.524 55.000 0.00 0.00 0.00 2.57
7915 8472 1.544314 GGCAGGGTATGAGGCTTGATC 60.544 57.143 0.00 0.00 0.00 2.92
7917 8474 0.394565 AGGGTATGAGGCTTGATCGC 59.605 55.000 0.00 0.00 0.00 4.58
7919 8476 1.475034 GGGTATGAGGCTTGATCGCAA 60.475 52.381 0.00 0.00 0.00 4.85
7973 8530 3.696051 TGGGCATGATACTTTTCTGCTTC 59.304 43.478 0.00 0.00 33.43 3.86
7979 8536 4.245660 TGATACTTTTCTGCTTCAGTCGG 58.754 43.478 0.00 0.00 32.61 4.79
7988 8545 1.153667 CTTCAGTCGGCTGGCTCTC 60.154 63.158 18.55 0.00 42.78 3.20
7989 8546 1.603236 CTTCAGTCGGCTGGCTCTCT 61.603 60.000 18.55 0.00 42.78 3.10
7991 8548 0.749818 TCAGTCGGCTGGCTCTCTAG 60.750 60.000 18.55 0.00 42.78 2.43
7992 8549 0.749818 CAGTCGGCTGGCTCTCTAGA 60.750 60.000 9.79 0.00 39.01 2.43
7993 8550 0.465460 AGTCGGCTGGCTCTCTAGAG 60.465 60.000 13.98 13.98 44.75 2.43
7996 8553 0.539438 CGGCTGGCTCTCTAGAGGAT 60.539 60.000 19.67 0.00 42.29 3.24
7997 8554 1.271652 CGGCTGGCTCTCTAGAGGATA 60.272 57.143 19.67 0.00 42.29 2.59
7998 8555 2.446435 GGCTGGCTCTCTAGAGGATAG 58.554 57.143 19.67 10.85 42.29 2.08
8003 8560 3.205507 TGGCTCTCTAGAGGATAGTTGGT 59.794 47.826 19.67 0.00 42.29 3.67
8004 8561 3.824443 GGCTCTCTAGAGGATAGTTGGTC 59.176 52.174 19.67 0.00 42.29 4.02
8005 8562 4.465886 GCTCTCTAGAGGATAGTTGGTCA 58.534 47.826 19.67 0.00 42.29 4.02
8006 8563 5.076873 GCTCTCTAGAGGATAGTTGGTCAT 58.923 45.833 19.67 0.00 42.29 3.06
8007 8564 5.048083 GCTCTCTAGAGGATAGTTGGTCATG 60.048 48.000 19.67 0.00 42.29 3.07
8010 8568 6.718912 TCTCTAGAGGATAGTTGGTCATGATG 59.281 42.308 19.67 0.00 0.00 3.07
8054 8612 5.720371 TTTTCAGGTGTGTTAATGGATGG 57.280 39.130 0.00 0.00 0.00 3.51
8055 8613 4.380843 TTCAGGTGTGTTAATGGATGGT 57.619 40.909 0.00 0.00 0.00 3.55
8057 8615 5.506730 TCAGGTGTGTTAATGGATGGTTA 57.493 39.130 0.00 0.00 0.00 2.85
8058 8616 5.882040 TCAGGTGTGTTAATGGATGGTTAA 58.118 37.500 0.00 0.00 0.00 2.01
8059 8617 6.489603 TCAGGTGTGTTAATGGATGGTTAAT 58.510 36.000 0.00 0.00 0.00 1.40
8060 8618 6.951198 TCAGGTGTGTTAATGGATGGTTAATT 59.049 34.615 0.00 0.00 0.00 1.40
8061 8619 7.122055 TCAGGTGTGTTAATGGATGGTTAATTC 59.878 37.037 0.00 0.00 0.00 2.17
8062 8620 7.122650 CAGGTGTGTTAATGGATGGTTAATTCT 59.877 37.037 0.00 0.00 0.00 2.40
8063 8621 7.122650 AGGTGTGTTAATGGATGGTTAATTCTG 59.877 37.037 0.00 0.00 0.00 3.02
8064 8622 6.751888 GTGTGTTAATGGATGGTTAATTCTGC 59.248 38.462 0.00 0.00 0.00 4.26
8066 8624 7.123997 TGTGTTAATGGATGGTTAATTCTGCAT 59.876 33.333 0.00 0.00 0.00 3.96
8068 8626 9.194972 TGTTAATGGATGGTTAATTCTGCATTA 57.805 29.630 0.00 0.00 0.00 1.90
8085 8716 7.035004 TCTGCATTATGTGTTTGAAATTAGGC 58.965 34.615 0.00 0.00 0.00 3.93
8089 8720 3.907894 TGTGTTTGAAATTAGGCGACC 57.092 42.857 0.00 0.00 0.00 4.79
8091 8722 1.198178 TGTTTGAAATTAGGCGACCGC 59.802 47.619 5.75 5.75 41.06 5.68
8099 8730 0.454600 TTAGGCGACCGCTTCTACTG 59.545 55.000 14.25 0.00 41.60 2.74
8101 8732 1.038130 AGGCGACCGCTTCTACTGAT 61.038 55.000 14.25 0.00 41.60 2.90
8102 8733 0.872021 GGCGACCGCTTCTACTGATG 60.872 60.000 14.25 0.00 41.60 3.07
8104 8735 1.550065 CGACCGCTTCTACTGATGTG 58.450 55.000 0.00 0.00 0.00 3.21
8107 8738 1.002366 CCGCTTCTACTGATGTGCAC 58.998 55.000 10.75 10.75 0.00 4.57
8109 8740 1.657594 CGCTTCTACTGATGTGCACAG 59.342 52.381 25.84 14.19 40.68 3.66
8114 8745 4.335400 TCTACTGATGTGCACAGAAACA 57.665 40.909 25.84 19.07 38.55 2.83
8116 8747 2.224606 ACTGATGTGCACAGAAACAGG 58.775 47.619 30.30 20.38 38.55 4.00
8122 8753 1.946768 GTGCACAGAAACAGGCAGTAA 59.053 47.619 13.17 0.00 36.86 2.24
8123 8754 2.554032 GTGCACAGAAACAGGCAGTAAT 59.446 45.455 13.17 0.00 36.86 1.89
8125 8756 3.636300 TGCACAGAAACAGGCAGTAATTT 59.364 39.130 0.00 0.00 0.00 1.82
8132 8763 5.827797 AGAAACAGGCAGTAATTTCAGAACA 59.172 36.000 0.00 0.00 34.22 3.18
8134 8765 6.655078 AACAGGCAGTAATTTCAGAACAAT 57.345 33.333 0.00 0.00 0.00 2.71
8147 8778 7.750229 TTTCAGAACAATGAACAGCTAAGAT 57.250 32.000 0.00 0.00 38.87 2.40
8156 8787 7.337689 ACAATGAACAGCTAAGATAAGCATGAA 59.662 33.333 0.00 0.00 45.30 2.57
8157 8788 8.350722 CAATGAACAGCTAAGATAAGCATGAAT 58.649 33.333 0.00 0.00 45.30 2.57
8158 8789 7.870509 TGAACAGCTAAGATAAGCATGAATT 57.129 32.000 0.00 0.00 45.30 2.17
8159 8790 8.284945 TGAACAGCTAAGATAAGCATGAATTT 57.715 30.769 0.00 0.00 45.30 1.82
8160 8791 8.400947 TGAACAGCTAAGATAAGCATGAATTTC 58.599 33.333 0.00 0.00 45.30 2.17
8161 8792 7.870509 ACAGCTAAGATAAGCATGAATTTCA 57.129 32.000 0.75 0.75 45.30 2.69
8162 8793 7.928103 ACAGCTAAGATAAGCATGAATTTCAG 58.072 34.615 5.21 0.00 45.30 3.02
8163 8794 7.772292 ACAGCTAAGATAAGCATGAATTTCAGA 59.228 33.333 5.21 0.00 45.30 3.27
8164 8795 8.618677 CAGCTAAGATAAGCATGAATTTCAGAA 58.381 33.333 5.21 0.00 45.30 3.02
8165 8796 8.619546 AGCTAAGATAAGCATGAATTTCAGAAC 58.380 33.333 5.21 0.00 45.30 3.01
8179 8810 8.641541 TGAATTTCAGAACTTGGCTAGAAATTT 58.358 29.630 2.20 0.00 42.41 1.82
8180 8811 9.481340 GAATTTCAGAACTTGGCTAGAAATTTT 57.519 29.630 2.20 0.00 42.41 1.82
8189 8820 7.433680 ACTTGGCTAGAAATTTTAGTTTGGTG 58.566 34.615 2.20 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.164268 TCATGCATGCTTTAAGTGGGTT 58.836 40.909 22.25 0.00 0.00 4.11
4 5 2.480759 GGCTCATGCATGCTTTAAGTGG 60.481 50.000 22.25 0.00 41.91 4.00
5 6 2.426024 AGGCTCATGCATGCTTTAAGTG 59.574 45.455 22.25 8.12 41.91 3.16
6 7 2.731572 AGGCTCATGCATGCTTTAAGT 58.268 42.857 22.25 0.00 41.91 2.24
7 8 4.906065 TTAGGCTCATGCATGCTTTAAG 57.094 40.909 22.25 14.25 41.91 1.85
8 9 4.949238 TCTTTAGGCTCATGCATGCTTTAA 59.051 37.500 22.25 13.57 41.91 1.52
9 10 4.525996 TCTTTAGGCTCATGCATGCTTTA 58.474 39.130 22.25 8.59 41.91 1.85
10 11 3.359033 TCTTTAGGCTCATGCATGCTTT 58.641 40.909 22.25 9.54 41.91 3.51
11 12 3.008835 TCTTTAGGCTCATGCATGCTT 57.991 42.857 22.25 10.16 41.91 3.91
12 13 2.723322 TCTTTAGGCTCATGCATGCT 57.277 45.000 22.25 15.25 41.91 3.79
13 14 2.228343 GGATCTTTAGGCTCATGCATGC 59.772 50.000 22.25 11.82 41.91 4.06
14 15 2.483106 CGGATCTTTAGGCTCATGCATG 59.517 50.000 21.07 21.07 41.91 4.06
15 16 2.551721 CCGGATCTTTAGGCTCATGCAT 60.552 50.000 0.00 0.00 41.91 3.96
16 17 1.202687 CCGGATCTTTAGGCTCATGCA 60.203 52.381 0.00 0.00 41.91 3.96
17 18 1.517242 CCGGATCTTTAGGCTCATGC 58.483 55.000 0.00 0.00 38.76 4.06
18 19 1.694150 TCCCGGATCTTTAGGCTCATG 59.306 52.381 0.73 0.00 0.00 3.07
19 20 2.103153 TCCCGGATCTTTAGGCTCAT 57.897 50.000 0.73 0.00 0.00 2.90
20 21 2.103153 ATCCCGGATCTTTAGGCTCA 57.897 50.000 0.73 0.00 0.00 4.26
21 22 4.828072 ATAATCCCGGATCTTTAGGCTC 57.172 45.455 0.73 0.00 0.00 4.70
22 23 6.126739 GGATAATAATCCCGGATCTTTAGGCT 60.127 42.308 0.73 0.00 45.37 4.58
23 24 6.056236 GGATAATAATCCCGGATCTTTAGGC 58.944 44.000 0.73 0.07 45.37 3.93
37 38 3.503748 GCTGGTGTGCTGGGATAATAATC 59.496 47.826 0.00 0.00 0.00 1.75
38 39 3.117550 TGCTGGTGTGCTGGGATAATAAT 60.118 43.478 0.00 0.00 0.00 1.28
39 40 2.240921 TGCTGGTGTGCTGGGATAATAA 59.759 45.455 0.00 0.00 0.00 1.40
40 41 1.843206 TGCTGGTGTGCTGGGATAATA 59.157 47.619 0.00 0.00 0.00 0.98
41 42 0.625316 TGCTGGTGTGCTGGGATAAT 59.375 50.000 0.00 0.00 0.00 1.28
42 43 0.403655 TTGCTGGTGTGCTGGGATAA 59.596 50.000 0.00 0.00 0.00 1.75
43 44 0.625316 ATTGCTGGTGTGCTGGGATA 59.375 50.000 0.00 0.00 0.00 2.59
44 45 0.968901 CATTGCTGGTGTGCTGGGAT 60.969 55.000 0.00 0.00 0.00 3.85
45 46 1.604308 CATTGCTGGTGTGCTGGGA 60.604 57.895 0.00 0.00 0.00 4.37
46 47 2.642254 CCATTGCTGGTGTGCTGGG 61.642 63.158 0.00 0.00 37.79 4.45
47 48 2.967397 CCATTGCTGGTGTGCTGG 59.033 61.111 0.00 0.00 37.79 4.85
48 49 2.260434 GCCATTGCTGGTGTGCTG 59.740 61.111 0.00 0.00 45.10 4.41
49 50 2.203523 TGCCATTGCTGGTGTGCT 60.204 55.556 0.00 0.00 45.10 4.40
50 51 2.048877 GTGCCATTGCTGGTGTGC 60.049 61.111 0.00 0.00 45.10 4.57
51 52 0.104487 TTTGTGCCATTGCTGGTGTG 59.896 50.000 0.00 0.00 45.10 3.82
52 53 0.829333 TTTTGTGCCATTGCTGGTGT 59.171 45.000 0.00 0.00 45.10 4.16
53 54 1.219646 GTTTTGTGCCATTGCTGGTG 58.780 50.000 0.00 0.00 45.10 4.17
54 55 0.829333 TGTTTTGTGCCATTGCTGGT 59.171 45.000 0.00 0.00 45.10 4.00
55 56 1.950828 TTGTTTTGTGCCATTGCTGG 58.049 45.000 0.00 0.00 46.17 4.85
56 57 4.097012 GTTTTTGTTTTGTGCCATTGCTG 58.903 39.130 0.00 0.00 38.71 4.41
57 58 3.181512 CGTTTTTGTTTTGTGCCATTGCT 60.182 39.130 0.00 0.00 38.71 3.91
58 59 3.097185 CGTTTTTGTTTTGTGCCATTGC 58.903 40.909 0.00 0.00 38.26 3.56
59 60 3.372206 TCCGTTTTTGTTTTGTGCCATTG 59.628 39.130 0.00 0.00 0.00 2.82
60 61 3.600388 TCCGTTTTTGTTTTGTGCCATT 58.400 36.364 0.00 0.00 0.00 3.16
61 62 3.252974 TCCGTTTTTGTTTTGTGCCAT 57.747 38.095 0.00 0.00 0.00 4.40
62 63 2.743636 TCCGTTTTTGTTTTGTGCCA 57.256 40.000 0.00 0.00 0.00 4.92
63 64 2.286125 GCATCCGTTTTTGTTTTGTGCC 60.286 45.455 0.00 0.00 0.00 5.01
64 65 2.349886 TGCATCCGTTTTTGTTTTGTGC 59.650 40.909 0.00 0.00 0.00 4.57
65 66 4.605793 CGATGCATCCGTTTTTGTTTTGTG 60.606 41.667 20.87 0.00 0.00 3.33
66 67 3.489047 CGATGCATCCGTTTTTGTTTTGT 59.511 39.130 20.87 0.00 0.00 2.83
67 68 3.661419 GCGATGCATCCGTTTTTGTTTTG 60.661 43.478 20.87 3.26 0.00 2.44
68 69 2.474735 GCGATGCATCCGTTTTTGTTTT 59.525 40.909 20.87 0.00 0.00 2.43
69 70 2.058057 GCGATGCATCCGTTTTTGTTT 58.942 42.857 20.87 0.00 0.00 2.83
70 71 1.668628 GGCGATGCATCCGTTTTTGTT 60.669 47.619 20.87 0.00 0.00 2.83
71 72 0.109319 GGCGATGCATCCGTTTTTGT 60.109 50.000 20.87 0.00 0.00 2.83
72 73 0.109365 TGGCGATGCATCCGTTTTTG 60.109 50.000 20.87 6.15 0.00 2.44
73 74 0.109319 GTGGCGATGCATCCGTTTTT 60.109 50.000 20.87 0.00 0.00 1.94
74 75 1.240641 TGTGGCGATGCATCCGTTTT 61.241 50.000 20.87 0.00 0.00 2.43
75 76 1.031571 ATGTGGCGATGCATCCGTTT 61.032 50.000 20.87 0.00 0.00 3.60
76 77 0.179059 TATGTGGCGATGCATCCGTT 60.179 50.000 20.87 3.20 0.00 4.44
77 78 0.035317 ATATGTGGCGATGCATCCGT 59.965 50.000 20.87 10.40 0.00 4.69
78 79 1.159285 AATATGTGGCGATGCATCCG 58.841 50.000 20.87 16.06 0.00 4.18
79 80 2.095059 GGAAATATGTGGCGATGCATCC 60.095 50.000 20.87 13.07 0.00 3.51
80 81 2.816087 AGGAAATATGTGGCGATGCATC 59.184 45.455 17.10 17.10 0.00 3.91
81 82 2.867624 AGGAAATATGTGGCGATGCAT 58.132 42.857 0.00 0.00 0.00 3.96
82 83 2.346766 AGGAAATATGTGGCGATGCA 57.653 45.000 0.00 0.00 0.00 3.96
83 84 2.618241 TCAAGGAAATATGTGGCGATGC 59.382 45.455 0.00 0.00 0.00 3.91
84 85 4.516321 TCATCAAGGAAATATGTGGCGATG 59.484 41.667 0.00 0.00 0.00 3.84
85 86 4.717877 TCATCAAGGAAATATGTGGCGAT 58.282 39.130 0.00 0.00 0.00 4.58
86 87 4.149511 TCATCAAGGAAATATGTGGCGA 57.850 40.909 0.00 0.00 0.00 5.54
87 88 6.558771 TTATCATCAAGGAAATATGTGGCG 57.441 37.500 0.00 0.00 0.00 5.69
147 148 7.954788 AGTGCTACACTTTTGTTTTTCAAAA 57.045 28.000 0.00 5.79 42.59 2.44
162 163 2.028930 ACTCCTGCTACAAGTGCTACAC 60.029 50.000 0.00 0.00 34.10 2.90
163 164 2.248248 ACTCCTGCTACAAGTGCTACA 58.752 47.619 0.00 0.00 0.00 2.74
164 165 3.735514 GCTACTCCTGCTACAAGTGCTAC 60.736 52.174 0.00 0.00 0.00 3.58
165 166 2.427453 GCTACTCCTGCTACAAGTGCTA 59.573 50.000 0.00 0.00 0.00 3.49
166 167 1.205893 GCTACTCCTGCTACAAGTGCT 59.794 52.381 0.00 0.00 0.00 4.40
167 168 1.066858 TGCTACTCCTGCTACAAGTGC 60.067 52.381 0.00 0.00 0.00 4.40
168 169 3.319137 TTGCTACTCCTGCTACAAGTG 57.681 47.619 0.00 0.00 0.00 3.16
169 170 3.578716 TCTTTGCTACTCCTGCTACAAGT 59.421 43.478 0.00 0.00 0.00 3.16
170 171 4.180057 CTCTTTGCTACTCCTGCTACAAG 58.820 47.826 0.00 0.00 0.00 3.16
171 172 3.578716 ACTCTTTGCTACTCCTGCTACAA 59.421 43.478 0.00 0.00 0.00 2.41
172 173 3.165875 ACTCTTTGCTACTCCTGCTACA 58.834 45.455 0.00 0.00 0.00 2.74
173 174 3.878160 ACTCTTTGCTACTCCTGCTAC 57.122 47.619 0.00 0.00 0.00 3.58
174 175 4.341487 TGTACTCTTTGCTACTCCTGCTA 58.659 43.478 0.00 0.00 0.00 3.49
175 176 3.165875 TGTACTCTTTGCTACTCCTGCT 58.834 45.455 0.00 0.00 0.00 4.24
176 177 3.594603 TGTACTCTTTGCTACTCCTGC 57.405 47.619 0.00 0.00 0.00 4.85
177 178 6.256757 GCTATTTGTACTCTTTGCTACTCCTG 59.743 42.308 0.00 0.00 0.00 3.86
178 179 6.070767 TGCTATTTGTACTCTTTGCTACTCCT 60.071 38.462 0.00 0.00 0.00 3.69
179 180 6.106673 TGCTATTTGTACTCTTTGCTACTCC 58.893 40.000 0.00 0.00 0.00 3.85
180 181 7.596749 TTGCTATTTGTACTCTTTGCTACTC 57.403 36.000 0.00 0.00 0.00 2.59
181 182 7.094762 GGTTTGCTATTTGTACTCTTTGCTACT 60.095 37.037 0.00 0.00 0.00 2.57
182 183 7.021790 GGTTTGCTATTTGTACTCTTTGCTAC 58.978 38.462 0.00 0.00 0.00 3.58
183 184 6.712998 TGGTTTGCTATTTGTACTCTTTGCTA 59.287 34.615 0.00 0.00 0.00 3.49
184 185 5.534654 TGGTTTGCTATTTGTACTCTTTGCT 59.465 36.000 0.00 0.00 0.00 3.91
185 186 5.629435 GTGGTTTGCTATTTGTACTCTTTGC 59.371 40.000 0.00 0.00 0.00 3.68
186 187 6.734137 TGTGGTTTGCTATTTGTACTCTTTG 58.266 36.000 0.00 0.00 0.00 2.77
187 188 6.952773 TGTGGTTTGCTATTTGTACTCTTT 57.047 33.333 0.00 0.00 0.00 2.52
188 189 6.770785 TCTTGTGGTTTGCTATTTGTACTCTT 59.229 34.615 0.00 0.00 0.00 2.85
189 190 6.296026 TCTTGTGGTTTGCTATTTGTACTCT 58.704 36.000 0.00 0.00 0.00 3.24
190 191 6.554334 TCTTGTGGTTTGCTATTTGTACTC 57.446 37.500 0.00 0.00 0.00 2.59
191 192 5.048713 GCTCTTGTGGTTTGCTATTTGTACT 60.049 40.000 0.00 0.00 0.00 2.73
192 193 5.154222 GCTCTTGTGGTTTGCTATTTGTAC 58.846 41.667 0.00 0.00 0.00 2.90
193 194 4.824537 TGCTCTTGTGGTTTGCTATTTGTA 59.175 37.500 0.00 0.00 0.00 2.41
194 195 3.636300 TGCTCTTGTGGTTTGCTATTTGT 59.364 39.130 0.00 0.00 0.00 2.83
195 196 4.241590 TGCTCTTGTGGTTTGCTATTTG 57.758 40.909 0.00 0.00 0.00 2.32
196 197 4.281688 ACATGCTCTTGTGGTTTGCTATTT 59.718 37.500 0.00 0.00 0.00 1.40
197 198 3.828451 ACATGCTCTTGTGGTTTGCTATT 59.172 39.130 0.00 0.00 0.00 1.73
198 199 3.424703 ACATGCTCTTGTGGTTTGCTAT 58.575 40.909 0.00 0.00 0.00 2.97
199 200 2.813754 GACATGCTCTTGTGGTTTGCTA 59.186 45.455 0.00 0.00 0.00 3.49
200 201 1.610522 GACATGCTCTTGTGGTTTGCT 59.389 47.619 0.00 0.00 0.00 3.91
201 202 1.336240 GGACATGCTCTTGTGGTTTGC 60.336 52.381 0.00 0.00 0.00 3.68
202 203 1.955778 TGGACATGCTCTTGTGGTTTG 59.044 47.619 0.00 0.00 0.00 2.93
203 204 1.956477 GTGGACATGCTCTTGTGGTTT 59.044 47.619 0.00 0.00 0.00 3.27
204 205 1.609208 GTGGACATGCTCTTGTGGTT 58.391 50.000 0.00 0.00 0.00 3.67
205 206 0.250901 GGTGGACATGCTCTTGTGGT 60.251 55.000 0.00 0.00 0.00 4.16
206 207 0.250858 TGGTGGACATGCTCTTGTGG 60.251 55.000 0.00 0.00 0.00 4.17
207 208 1.830279 ATGGTGGACATGCTCTTGTG 58.170 50.000 0.00 0.00 38.70 3.33
208 209 2.092753 CCTATGGTGGACATGCTCTTGT 60.093 50.000 0.00 0.00 40.82 3.16
209 210 2.092753 ACCTATGGTGGACATGCTCTTG 60.093 50.000 0.00 0.00 40.82 3.02
210 211 2.200081 ACCTATGGTGGACATGCTCTT 58.800 47.619 0.00 0.00 40.82 2.85
211 212 1.885049 ACCTATGGTGGACATGCTCT 58.115 50.000 0.00 0.00 40.82 4.09
212 213 2.684881 CAAACCTATGGTGGACATGCTC 59.315 50.000 0.00 0.00 40.82 4.26
213 214 2.621407 CCAAACCTATGGTGGACATGCT 60.621 50.000 0.00 0.00 40.82 3.79
214 215 1.750778 CCAAACCTATGGTGGACATGC 59.249 52.381 0.00 0.00 40.82 4.06
223 224 1.683011 CCTGCCAGACCAAACCTATGG 60.683 57.143 0.00 0.00 46.38 2.74
224 225 1.004745 ACCTGCCAGACCAAACCTATG 59.995 52.381 0.00 0.00 0.00 2.23
225 226 1.004745 CACCTGCCAGACCAAACCTAT 59.995 52.381 0.00 0.00 0.00 2.57
226 227 0.400213 CACCTGCCAGACCAAACCTA 59.600 55.000 0.00 0.00 0.00 3.08
227 228 1.151450 CACCTGCCAGACCAAACCT 59.849 57.895 0.00 0.00 0.00 3.50
228 229 1.903404 CCACCTGCCAGACCAAACC 60.903 63.158 0.00 0.00 0.00 3.27
229 230 1.903404 CCCACCTGCCAGACCAAAC 60.903 63.158 0.00 0.00 0.00 2.93
230 231 2.520458 CCCACCTGCCAGACCAAA 59.480 61.111 0.00 0.00 0.00 3.28
231 232 4.284550 GCCCACCTGCCAGACCAA 62.285 66.667 0.00 0.00 0.00 3.67
939 977 2.581354 CAAGACCAGAGCCCTCCG 59.419 66.667 0.00 0.00 0.00 4.63
1092 1130 0.251832 TTGGGGTGGTGTGTTGTTGT 60.252 50.000 0.00 0.00 0.00 3.32
1093 1131 1.068434 GATTGGGGTGGTGTGTTGTTG 59.932 52.381 0.00 0.00 0.00 3.33
1132 1170 2.205074 GTGTGTAATGGAGCGATGGAG 58.795 52.381 0.00 0.00 0.00 3.86
1158 1196 3.506067 CACACAATGTTCTAGAAACCCCC 59.494 47.826 6.78 0.00 0.00 5.40
1163 1213 3.253188 GGCAGCACACAATGTTCTAGAAA 59.747 43.478 6.78 0.00 0.00 2.52
1170 1220 2.336088 GCGGCAGCACACAATGTT 59.664 55.556 3.18 0.00 44.35 2.71
1182 1232 1.476085 CCAACCAATGAAATAGCGGCA 59.524 47.619 1.45 0.00 0.00 5.69
1195 1245 4.751767 AGAAATTTCTGCAACCAACCAA 57.248 36.364 19.86 0.00 35.89 3.67
1196 1246 4.440880 CAAGAAATTTCTGCAACCAACCA 58.559 39.130 21.15 0.00 37.65 3.67
1197 1247 3.809279 CCAAGAAATTTCTGCAACCAACC 59.191 43.478 21.15 0.00 37.65 3.77
1198 1248 3.809279 CCCAAGAAATTTCTGCAACCAAC 59.191 43.478 21.15 0.00 37.65 3.77
1227 1277 0.599728 CAGATAGGCGAGCTGAAGGC 60.600 60.000 7.09 0.00 44.86 4.35
1238 1294 1.068250 GTCCTGACCGCAGATAGGC 59.932 63.158 0.00 0.00 45.17 3.93
1240 1296 2.577700 ACTAGTCCTGACCGCAGATAG 58.422 52.381 0.00 0.00 45.17 2.08
1247 1303 2.731341 CGTAAGCAACTAGTCCTGACCG 60.731 54.545 0.00 0.00 0.00 4.79
1273 1329 1.136141 GCGCCAAGATTCATCATAGCG 60.136 52.381 0.00 11.02 40.82 4.26
1276 1332 2.636647 TGGCGCCAAGATTCATCATA 57.363 45.000 30.74 0.00 0.00 2.15
1277 1333 1.991121 ATGGCGCCAAGATTCATCAT 58.009 45.000 36.33 10.11 0.00 2.45
1289 1345 4.796495 AGGGACCGAAATGGCGCC 62.796 66.667 22.73 22.73 43.94 6.53
1292 1348 2.052104 CCCAAGGGACCGAAATGGC 61.052 63.158 0.00 0.00 43.94 4.40
1293 1349 0.251608 AACCCAAGGGACCGAAATGG 60.252 55.000 13.15 0.00 40.67 3.16
1295 1351 1.283905 CCTAACCCAAGGGACCGAAAT 59.716 52.381 13.15 0.00 38.96 2.17
1327 1384 2.958578 AATGAACCCCGGGCATAGCG 62.959 60.000 17.73 1.97 0.00 4.26
1336 1411 1.135315 CAATCAGTGCAATGAACCCCG 60.135 52.381 21.97 4.24 31.76 5.73
1343 1418 4.201891 GCTTCTCTACCAATCAGTGCAATG 60.202 45.833 8.08 8.08 0.00 2.82
1344 1419 3.944015 GCTTCTCTACCAATCAGTGCAAT 59.056 43.478 0.00 0.00 0.00 3.56
1345 1420 3.008375 AGCTTCTCTACCAATCAGTGCAA 59.992 43.478 0.00 0.00 0.00 4.08
1347 1422 3.258971 AGCTTCTCTACCAATCAGTGC 57.741 47.619 0.00 0.00 0.00 4.40
1372 1458 3.652581 GGCTCAGCCCTACTTTGTT 57.347 52.632 3.37 0.00 44.06 2.83
1388 1478 2.755103 CACTCTTTAGGAAACCATGGGC 59.245 50.000 18.09 4.76 0.00 5.36
1391 1481 3.119708 GCAGCACTCTTTAGGAAACCATG 60.120 47.826 0.00 0.00 0.00 3.66
1468 1558 2.935740 GCAGAAAGCCCCACCTTGC 61.936 63.158 0.00 0.00 37.23 4.01
1479 1569 0.250234 TCGATCCACCCAGCAGAAAG 59.750 55.000 0.00 0.00 0.00 2.62
1485 1575 2.111878 CCCATCGATCCACCCAGC 59.888 66.667 0.00 0.00 0.00 4.85
1486 1576 0.760567 TCTCCCATCGATCCACCCAG 60.761 60.000 0.00 0.00 0.00 4.45
1497 1587 1.141053 ACCCGCATACTTTCTCCCATC 59.859 52.381 0.00 0.00 0.00 3.51
1507 1597 1.688772 ACGACATAGACCCGCATACT 58.311 50.000 0.00 0.00 0.00 2.12
1509 1599 3.216800 AGTAACGACATAGACCCGCATA 58.783 45.455 0.00 0.00 0.00 3.14
1527 1617 5.527214 CCCAAGCGACAATAATCAATGAGTA 59.473 40.000 0.00 0.00 0.00 2.59
1549 1639 0.242017 GTGTGAAGCATGCAAGACCC 59.758 55.000 21.98 0.00 0.00 4.46
1567 1657 7.147724 TGCTCTTGCCTATAATACACTACTTGT 60.148 37.037 0.00 0.00 39.36 3.16
1568 1658 7.210174 TGCTCTTGCCTATAATACACTACTTG 58.790 38.462 0.00 0.00 38.71 3.16
1569 1659 7.287927 TCTGCTCTTGCCTATAATACACTACTT 59.712 37.037 0.00 0.00 38.71 2.24
1572 1662 7.782897 ATCTGCTCTTGCCTATAATACACTA 57.217 36.000 0.00 0.00 38.71 2.74
1589 1679 4.233789 CCGCTCTCATACTAAATCTGCTC 58.766 47.826 0.00 0.00 0.00 4.26
1668 1758 5.756347 CGCTTTTGCCTATAATACACCTGTA 59.244 40.000 0.00 0.00 43.93 2.74
1708 1801 1.033574 CCTAGTAAGCCTCCCGAGTG 58.966 60.000 0.00 0.00 0.00 3.51
1779 1873 0.817634 ACGCTTTTAGCAGCACACCA 60.818 50.000 0.00 0.00 42.58 4.17
1820 1914 2.611630 GCAATAGCTAGCGGGCAGC 61.612 63.158 9.55 0.00 41.65 5.25
1843 1937 2.650322 TGTGACAGGACAAAGGAAACC 58.350 47.619 0.00 0.00 0.00 3.27
1890 1985 5.617751 GCACAGCATGAACTTTAACTGTAGG 60.618 44.000 0.00 0.00 39.69 3.18
1966 2062 0.884704 CAGGACCAGGACAAACACGG 60.885 60.000 0.00 0.00 0.00 4.94
1970 2066 0.537371 CCCACAGGACCAGGACAAAC 60.537 60.000 0.00 0.00 33.47 2.93
1972 2068 1.074090 TCCCACAGGACCAGGACAA 60.074 57.895 0.00 0.00 37.19 3.18
1986 2082 3.009033 CCAGAAACTGATGGTAACTCCCA 59.991 47.826 0.00 0.00 39.27 4.37
1987 2083 3.610911 CCAGAAACTGATGGTAACTCCC 58.389 50.000 0.00 0.00 32.44 4.30
2005 2102 5.415701 ACAACTTTATGCCAATCTACACCAG 59.584 40.000 0.00 0.00 0.00 4.00
2059 2156 1.380302 GTGGTCATGGACTTGCCCT 59.620 57.895 0.00 0.00 34.97 5.19
2063 2160 2.549064 TCAGTGTGGTCATGGACTTG 57.451 50.000 0.00 0.00 32.47 3.16
2069 2166 4.834357 TTGTTTCATCAGTGTGGTCATG 57.166 40.909 0.00 0.00 0.00 3.07
2092 2189 2.418976 GTGAGACCGGCAATTAGGAAAC 59.581 50.000 0.00 0.00 0.00 2.78
2113 2210 4.084223 ACCGCTTATTTAGAACACGTTGTG 60.084 41.667 0.00 0.00 39.75 3.33
2118 2215 4.427312 AGGTACCGCTTATTTAGAACACG 58.573 43.478 6.18 0.00 0.00 4.49
2228 2476 2.671070 CGCAATTGAAAAGGGCTACACC 60.671 50.000 10.34 0.00 37.93 4.16
2248 2496 5.734720 AGTATGATGATTGTTATAGGGGCG 58.265 41.667 0.00 0.00 0.00 6.13
2305 2553 1.542915 CCAAGTTCTGAACCATGCCAG 59.457 52.381 16.48 1.70 0.00 4.85
2309 2557 5.009631 TGTATTCCCAAGTTCTGAACCATG 58.990 41.667 16.48 14.99 0.00 3.66
2310 2558 5.255397 TGTATTCCCAAGTTCTGAACCAT 57.745 39.130 16.48 3.91 0.00 3.55
2338 2586 2.370281 TAGAGGCTCTCTTTTGCACG 57.630 50.000 22.53 0.00 41.50 5.34
2482 2730 1.630878 AGGCCTTGAAGTAGGGAACAG 59.369 52.381 0.00 0.00 35.74 3.16
2491 2739 4.542697 TGTTCCTAAAAAGGCCTTGAAGT 58.457 39.130 21.33 7.24 0.00 3.01
2493 2741 6.493189 AATTGTTCCTAAAAAGGCCTTGAA 57.507 33.333 21.33 14.82 0.00 2.69
2494 2742 6.287525 CAAATTGTTCCTAAAAAGGCCTTGA 58.712 36.000 21.33 8.74 0.00 3.02
2495 2743 5.049474 GCAAATTGTTCCTAAAAAGGCCTTG 60.049 40.000 21.33 6.04 0.00 3.61
2496 2744 5.063204 GCAAATTGTTCCTAAAAAGGCCTT 58.937 37.500 13.78 13.78 0.00 4.35
2497 2745 4.347876 AGCAAATTGTTCCTAAAAAGGCCT 59.652 37.500 0.00 0.00 0.00 5.19
2498 2746 4.641396 AGCAAATTGTTCCTAAAAAGGCC 58.359 39.130 0.00 0.00 0.00 5.19
2528 2776 6.976934 TCTACAGCACATAATCAGGTATCA 57.023 37.500 0.00 0.00 0.00 2.15
2556 2804 5.655974 TCCAGCAAACTATTGGCATAATTGA 59.344 36.000 0.00 0.00 37.02 2.57
2584 2832 6.379133 ACACAGATAAATTGCAACTGATGGAT 59.621 34.615 17.93 0.00 33.53 3.41
2610 2859 0.099436 GCTGCTAAGCGGGTCATTTG 59.901 55.000 0.00 0.00 40.27 2.32
2625 2874 0.322816 TGGAATGGAACCAGAGCTGC 60.323 55.000 0.00 0.00 33.22 5.25
2677 2926 8.500753 TCACAGGAACACCAACATATATAAAC 57.499 34.615 0.00 0.00 0.00 2.01
2858 3109 3.613737 CACGAAAATGCTATTGCCCTTTG 59.386 43.478 0.00 0.00 38.71 2.77
3076 3530 8.893219 TCAGGTCACAATAATGAATACATCTC 57.107 34.615 0.00 0.00 35.50 2.75
3108 3562 6.675987 ACAAAGATGACAGAAAAATCTGCTC 58.324 36.000 5.78 4.24 41.19 4.26
3274 3734 2.420687 CCCCTCTCGAGCTTTTTAGCAT 60.421 50.000 7.81 0.00 37.25 3.79
3413 3873 2.306805 TCAATGCTTGTCCCTCTGATGT 59.693 45.455 0.00 0.00 0.00 3.06
3414 3874 2.681848 GTCAATGCTTGTCCCTCTGATG 59.318 50.000 0.00 0.00 0.00 3.07
3542 4004 5.979993 TGCGAAGGGTACATAAAGATAACA 58.020 37.500 0.00 0.00 0.00 2.41
3551 4013 2.181125 TGGAACTGCGAAGGGTACATA 58.819 47.619 0.00 0.00 0.00 2.29
3562 4024 0.806868 ATGAGCAACATGGAACTGCG 59.193 50.000 0.00 0.00 41.05 5.18
3564 4026 2.079158 ACGATGAGCAACATGGAACTG 58.921 47.619 11.37 0.00 39.56 3.16
3768 4231 6.470235 GCTTACATGCTTGTAATCATGACAAC 59.530 38.462 21.45 0.00 44.99 3.32
3813 4276 4.070630 TGAACTTGCCAAAAATTCCCTG 57.929 40.909 0.00 0.00 0.00 4.45
3825 4288 4.787598 CAAGTCACTACAATGAACTTGCC 58.212 43.478 0.00 0.00 38.50 4.52
3901 4364 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
3902 4365 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3903 4366 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
3904 4367 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3905 4368 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
3906 4369 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
3907 4370 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
3908 4371 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
3909 4372 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
3910 4373 6.605594 ACAAAGTTGAGTCACTTATTTTGGGA 59.394 34.615 12.94 0.00 35.87 4.37
3911 4374 6.805713 ACAAAGTTGAGTCACTTATTTTGGG 58.194 36.000 12.94 0.00 35.87 4.12
3912 4375 8.621286 AGTACAAAGTTGAGTCACTTATTTTGG 58.379 33.333 12.94 0.78 35.87 3.28
3918 4381 9.880157 AAAGTTAGTACAAAGTTGAGTCACTTA 57.120 29.630 0.00 0.00 35.87 2.24
3919 4382 8.788325 AAAGTTAGTACAAAGTTGAGTCACTT 57.212 30.769 0.00 0.00 38.74 3.16
3920 4383 9.530633 CTAAAGTTAGTACAAAGTTGAGTCACT 57.469 33.333 0.00 0.00 0.00 3.41
3921 4384 9.310716 ACTAAAGTTAGTACAAAGTTGAGTCAC 57.689 33.333 1.81 0.00 41.92 3.67
3948 4411 9.758651 GTCCCAAAATAAGTAAATCAACTTTGT 57.241 29.630 0.00 0.00 40.20 2.83
3949 4412 9.757227 TGTCCCAAAATAAGTAAATCAACTTTG 57.243 29.630 0.00 0.00 40.20 2.77
3950 4413 9.981114 CTGTCCCAAAATAAGTAAATCAACTTT 57.019 29.630 0.00 0.00 40.20 2.66
3951 4414 9.362151 TCTGTCCCAAAATAAGTAAATCAACTT 57.638 29.630 0.00 0.00 42.31 2.66
3952 4415 8.934023 TCTGTCCCAAAATAAGTAAATCAACT 57.066 30.769 0.00 0.00 0.00 3.16
3953 4416 8.244113 CCTCTGTCCCAAAATAAGTAAATCAAC 58.756 37.037 0.00 0.00 0.00 3.18
3954 4417 7.396055 CCCTCTGTCCCAAAATAAGTAAATCAA 59.604 37.037 0.00 0.00 0.00 2.57
3955 4418 6.889722 CCCTCTGTCCCAAAATAAGTAAATCA 59.110 38.462 0.00 0.00 0.00 2.57
3956 4419 7.116736 TCCCTCTGTCCCAAAATAAGTAAATC 58.883 38.462 0.00 0.00 0.00 2.17
3957 4420 7.039722 TCCCTCTGTCCCAAAATAAGTAAAT 57.960 36.000 0.00 0.00 0.00 1.40
3958 4421 6.045106 ACTCCCTCTGTCCCAAAATAAGTAAA 59.955 38.462 0.00 0.00 0.00 2.01
3959 4422 5.550403 ACTCCCTCTGTCCCAAAATAAGTAA 59.450 40.000 0.00 0.00 0.00 2.24
3960 4423 5.098663 ACTCCCTCTGTCCCAAAATAAGTA 58.901 41.667 0.00 0.00 0.00 2.24
3961 4424 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
3962 4425 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
3963 4426 5.347124 TCTACTCCCTCTGTCCCAAAATAA 58.653 41.667 0.00 0.00 0.00 1.40
3964 4427 4.955335 TCTACTCCCTCTGTCCCAAAATA 58.045 43.478 0.00 0.00 0.00 1.40
3965 4428 3.803340 TCTACTCCCTCTGTCCCAAAAT 58.197 45.455 0.00 0.00 0.00 1.82
3966 4429 3.269592 TCTACTCCCTCTGTCCCAAAA 57.730 47.619 0.00 0.00 0.00 2.44
3967 4430 3.269592 TTCTACTCCCTCTGTCCCAAA 57.730 47.619 0.00 0.00 0.00 3.28
3968 4431 3.491766 ATTCTACTCCCTCTGTCCCAA 57.508 47.619 0.00 0.00 0.00 4.12
3969 4432 4.834406 ATATTCTACTCCCTCTGTCCCA 57.166 45.455 0.00 0.00 0.00 4.37
3970 4433 5.894653 ACTATATTCTACTCCCTCTGTCCC 58.105 45.833 0.00 0.00 0.00 4.46
3971 4434 6.786122 AGACTATATTCTACTCCCTCTGTCC 58.214 44.000 0.00 0.00 0.00 4.02
3972 4435 7.455058 TGAGACTATATTCTACTCCCTCTGTC 58.545 42.308 0.00 0.00 0.00 3.51
3973 4436 7.395525 TGAGACTATATTCTACTCCCTCTGT 57.604 40.000 0.00 0.00 0.00 3.41
3974 4437 8.877864 ATTGAGACTATATTCTACTCCCTCTG 57.122 38.462 0.00 0.00 0.00 3.35
4016 4479 7.331026 CCAGTACTTTAGACAATCATGAGGAA 58.669 38.462 0.09 0.00 0.00 3.36
4021 4484 6.992063 AAGCCAGTACTTTAGACAATCATG 57.008 37.500 0.00 0.00 0.00 3.07
4024 4487 7.224949 GGACATAAGCCAGTACTTTAGACAATC 59.775 40.741 0.00 0.00 0.00 2.67
4025 4488 7.048512 GGACATAAGCCAGTACTTTAGACAAT 58.951 38.462 0.00 0.00 0.00 2.71
4029 4502 6.614694 TTGGACATAAGCCAGTACTTTAGA 57.385 37.500 0.00 0.00 36.64 2.10
4047 4520 9.227777 AGTTAAGGTTGTAACATAAGATTGGAC 57.772 33.333 0.00 0.00 36.59 4.02
4332 4810 3.254014 CTGTTCAGCCGCAAACCCG 62.254 63.158 6.28 0.00 0.00 5.28
4341 4819 4.997395 TGACTTGAGTAATTCTGTTCAGCC 59.003 41.667 0.00 0.00 0.00 4.85
4666 5147 6.148948 CGAATATTTTGCAAAGAACAGTCCA 58.851 36.000 12.41 0.00 0.00 4.02
4703 5184 8.522830 CAAAAGAAGAGGCCAAACATAAGAATA 58.477 33.333 5.01 0.00 0.00 1.75
4704 5185 7.233348 TCAAAAGAAGAGGCCAAACATAAGAAT 59.767 33.333 5.01 0.00 0.00 2.40
4705 5186 6.549364 TCAAAAGAAGAGGCCAAACATAAGAA 59.451 34.615 5.01 0.00 0.00 2.52
4706 5187 6.068010 TCAAAAGAAGAGGCCAAACATAAGA 58.932 36.000 5.01 0.00 0.00 2.10
4707 5188 6.331369 TCAAAAGAAGAGGCCAAACATAAG 57.669 37.500 5.01 0.00 0.00 1.73
4717 5215 6.863645 GGTCAATAAAGTTCAAAAGAAGAGGC 59.136 38.462 0.00 0.00 0.00 4.70
4724 5222 8.359642 TGATTCCAGGTCAATAAAGTTCAAAAG 58.640 33.333 0.00 0.00 0.00 2.27
4732 5230 6.604795 AGATGGTTGATTCCAGGTCAATAAAG 59.395 38.462 0.00 0.00 41.05 1.85
4833 5331 7.324178 TCTGTGCTTATCTTTACTCCTTTCTC 58.676 38.462 0.00 0.00 0.00 2.87
4891 5389 7.823745 ATCTTTGCTCTTGTCCTTTTTCTTA 57.176 32.000 0.00 0.00 0.00 2.10
4942 5440 0.908198 GGAGAGCCTCACCATGTCTT 59.092 55.000 3.03 0.00 31.08 3.01
4977 5475 4.040936 TCAGACTTCCTGCTACTCTCTT 57.959 45.455 0.00 0.00 42.62 2.85
4984 5482 7.038302 TCCTTAATTTCTTCAGACTTCCTGCTA 60.038 37.037 0.00 0.00 42.62 3.49
5135 5633 1.699083 TGCAGTCCTGTCATTCTCCAA 59.301 47.619 0.00 0.00 0.00 3.53
5152 5650 5.627367 GTGAATACGCATTTTGTTAACTGCA 59.373 36.000 15.35 0.00 39.22 4.41
5196 5694 0.473501 TTGCCCCAAGCCCTCATTTT 60.474 50.000 0.00 0.00 42.71 1.82
5199 5697 2.037847 GTTGCCCCAAGCCCTCAT 59.962 61.111 0.00 0.00 42.71 2.90
5273 5771 4.645535 CCTCCTTGAGATGAACTGTTGAA 58.354 43.478 0.00 0.00 0.00 2.69
5332 5830 5.104735 AGGTCTTGTGACTTTGACTCTTTCT 60.105 40.000 0.00 0.00 42.54 2.52
5350 5848 4.043561 TCAGTAGAGTTGGAGAGAGGTCTT 59.956 45.833 0.00 0.00 30.97 3.01
5519 6017 2.624029 CCTTACCATTTCCCCTGTGCAT 60.624 50.000 0.00 0.00 0.00 3.96
5526 6024 2.453521 GACCAACCTTACCATTTCCCC 58.546 52.381 0.00 0.00 0.00 4.81
5605 6103 3.047857 TCTATCCATCCCTGTTGATGCA 58.952 45.455 0.00 0.00 40.66 3.96
5665 6163 1.217916 TCCCATTTGGCCTTCGGATA 58.782 50.000 3.32 0.00 0.00 2.59
5854 6352 1.707427 AGCATTCTTCCACCTGGTTCT 59.293 47.619 0.00 0.00 36.34 3.01
5870 6368 2.241160 TGAAACACAAGGATGCAGCAT 58.759 42.857 7.91 7.91 0.00 3.79
5933 6431 3.254166 TCAGCTCTTCCAACTGCAATTTC 59.746 43.478 0.00 0.00 0.00 2.17
6070 6568 2.569404 TCTCTCCTTCTTTGCCTCCTTC 59.431 50.000 0.00 0.00 0.00 3.46
6090 6588 5.412594 TGCTCTTTGTGATTATGTTCCTGTC 59.587 40.000 0.00 0.00 0.00 3.51
6209 6707 5.028549 AGGATAACTTTCGCATCATCAGT 57.971 39.130 0.00 0.00 0.00 3.41
6337 6835 8.575649 AAAAGGTATAATGGTGTTCTACAAGG 57.424 34.615 0.00 0.00 0.00 3.61
6814 7312 4.400961 AGCCTCCTTGCCGACAGC 62.401 66.667 0.00 0.00 44.14 4.40
6820 7318 2.438075 CTGCTGAGCCTCCTTGCC 60.438 66.667 0.23 0.00 0.00 4.52
6846 7344 0.038159 CTCGAAGCCCTGAAACGACT 60.038 55.000 0.00 0.00 0.00 4.18
6929 7427 2.536997 ATCCCGAAGCCCTGAAACGG 62.537 60.000 0.00 0.00 42.67 4.44
6979 7480 1.149288 TGGGTGAGGTGACTTCCTAGT 59.851 52.381 0.00 0.00 44.43 2.57
6990 7491 4.785376 AGATACTTGAAATCTGGGTGAGGT 59.215 41.667 0.00 0.00 32.44 3.85
6999 7500 3.782523 TCTGCCCCAGATACTTGAAATCT 59.217 43.478 0.00 0.00 35.39 2.40
7035 7536 1.137675 TCCATGATCTGAGGTGCTTCG 59.862 52.381 0.00 0.00 0.00 3.79
7059 7560 2.430694 CCAGTCCTGATCACCGTAATCA 59.569 50.000 0.00 0.00 0.00 2.57
7068 7569 0.247460 CGAACAGCCAGTCCTGATCA 59.753 55.000 0.00 0.00 35.19 2.92
7071 7572 1.967535 CTCGAACAGCCAGTCCTGA 59.032 57.895 0.00 0.00 36.67 3.86
7092 7593 4.082523 TCTGGCTGGGTGCTACGC 62.083 66.667 0.00 0.00 42.39 4.42
7093 7594 1.888436 TTCTCTGGCTGGGTGCTACG 61.888 60.000 0.00 0.00 42.39 3.51
7114 7615 1.144936 CCTCGGTCTCCATCTTGGC 59.855 63.158 0.00 0.00 37.47 4.52
7182 7683 0.036105 ATGGCAGAGCAATGACGTCA 60.036 50.000 22.48 22.48 0.00 4.35
7191 7692 1.473257 GGAATGACGTATGGCAGAGCA 60.473 52.381 0.00 0.00 0.00 4.26
7226 7727 3.431346 GCTCAGTAGTTCAGGATGCATCA 60.431 47.826 27.25 5.00 34.76 3.07
7232 7733 5.669477 GATCTTTGCTCAGTAGTTCAGGAT 58.331 41.667 0.00 0.00 0.00 3.24
7320 7824 3.857549 CTACACAAGCTGTAGCAGAGA 57.142 47.619 6.65 0.00 44.71 3.10
7353 7857 3.069016 CACCAATGGATGAATCACCCATG 59.931 47.826 10.43 0.88 40.31 3.66
7428 7936 2.775890 TCGGGATCGATACTCTACACC 58.224 52.381 7.75 0.00 40.88 4.16
7486 8003 1.134220 ACGACCAACAGACACCAATGT 60.134 47.619 0.00 0.00 43.71 2.71
7516 8033 4.758251 CATGACCCCGCTGTCGCA 62.758 66.667 0.00 0.00 38.11 5.10
7517 8034 3.740128 ATCATGACCCCGCTGTCGC 62.740 63.158 0.00 0.00 38.11 5.19
7518 8035 1.884464 CATCATGACCCCGCTGTCG 60.884 63.158 0.00 0.00 38.11 4.35
7519 8036 0.531532 CTCATCATGACCCCGCTGTC 60.532 60.000 0.00 0.00 35.77 3.51
7520 8037 1.524002 CTCATCATGACCCCGCTGT 59.476 57.895 0.00 0.00 0.00 4.40
7522 8039 0.760567 TAGCTCATCATGACCCCGCT 60.761 55.000 0.00 6.70 30.75 5.52
7523 8040 0.320247 CTAGCTCATCATGACCCCGC 60.320 60.000 0.00 0.00 0.00 6.13
7524 8041 0.320247 GCTAGCTCATCATGACCCCG 60.320 60.000 7.70 0.00 0.00 5.73
7639 8180 0.341609 CCTCTTCTCCCTCTCCCCTT 59.658 60.000 0.00 0.00 0.00 3.95
7641 8182 0.340208 TTCCTCTTCTCCCTCTCCCC 59.660 60.000 0.00 0.00 0.00 4.81
7642 8183 1.289530 TCTTCCTCTTCTCCCTCTCCC 59.710 57.143 0.00 0.00 0.00 4.30
7653 8194 5.600484 TCACTCAAAGTCTCTTCTTCCTCTT 59.400 40.000 0.00 0.00 0.00 2.85
7654 8195 5.144100 TCACTCAAAGTCTCTTCTTCCTCT 58.856 41.667 0.00 0.00 0.00 3.69
7655 8196 5.010617 ACTCACTCAAAGTCTCTTCTTCCTC 59.989 44.000 0.00 0.00 0.00 3.71
7656 8197 4.898861 ACTCACTCAAAGTCTCTTCTTCCT 59.101 41.667 0.00 0.00 0.00 3.36
7657 8198 4.987912 CACTCACTCAAAGTCTCTTCTTCC 59.012 45.833 0.00 0.00 0.00 3.46
7658 8199 5.837437 TCACTCACTCAAAGTCTCTTCTTC 58.163 41.667 0.00 0.00 0.00 2.87
7659 8200 5.596361 TCTCACTCACTCAAAGTCTCTTCTT 59.404 40.000 0.00 0.00 0.00 2.52
7660 8201 5.009610 GTCTCACTCACTCAAAGTCTCTTCT 59.990 44.000 0.00 0.00 0.00 2.85
7746 8291 4.346129 GAACAAGAATAAATCAGGCAGCG 58.654 43.478 0.00 0.00 0.00 5.18
7772 8320 2.223479 ACACAAAACGACATGCCAACTC 60.223 45.455 0.00 0.00 0.00 3.01
7826 8375 7.491682 GGCAAAAACACCATCATCTATGTAAT 58.508 34.615 0.00 0.00 33.34 1.89
7872 8428 2.917933 CAGTGACTCTCCAACACCAAA 58.082 47.619 0.00 0.00 35.47 3.28
7873 8429 1.475034 GCAGTGACTCTCCAACACCAA 60.475 52.381 0.00 0.00 35.47 3.67
7875 8431 0.106708 TGCAGTGACTCTCCAACACC 59.893 55.000 0.00 0.00 35.47 4.16
7882 8438 1.079266 CCTGCCTGCAGTGACTCTC 60.079 63.158 17.23 0.00 42.15 3.20
7897 8454 1.875576 GCGATCAAGCCTCATACCCTG 60.876 57.143 0.00 0.00 0.00 4.45
7898 8455 0.394565 GCGATCAAGCCTCATACCCT 59.605 55.000 0.00 0.00 0.00 4.34
7899 8456 0.106708 TGCGATCAAGCCTCATACCC 59.893 55.000 0.00 0.00 36.02 3.69
7900 8457 1.869767 CTTGCGATCAAGCCTCATACC 59.130 52.381 0.00 0.00 42.66 2.73
7911 8468 5.132897 AGCCAAATTTTAACTTGCGATCA 57.867 34.783 0.00 0.00 0.00 2.92
7912 8469 5.062183 GGAAGCCAAATTTTAACTTGCGATC 59.938 40.000 2.66 0.00 0.00 3.69
7913 8470 4.929211 GGAAGCCAAATTTTAACTTGCGAT 59.071 37.500 2.66 0.00 0.00 4.58
7914 8471 4.202161 TGGAAGCCAAATTTTAACTTGCGA 60.202 37.500 9.87 0.00 32.07 5.10
7915 8472 4.054671 TGGAAGCCAAATTTTAACTTGCG 58.945 39.130 9.87 0.00 32.07 4.85
7927 8484 6.561626 ACTCTCAAAGTGTTTGGAAGCCAAA 61.562 40.000 7.50 7.50 42.95 3.28
7941 8498 3.521126 AGTATCATGCCCACTCTCAAAGT 59.479 43.478 0.00 0.00 39.44 2.66
7942 8499 4.148128 AGTATCATGCCCACTCTCAAAG 57.852 45.455 0.00 0.00 0.00 2.77
7973 8530 0.749818 TCTAGAGAGCCAGCCGACTG 60.750 60.000 0.00 0.00 44.05 3.51
7979 8536 3.154827 ACTATCCTCTAGAGAGCCAGC 57.845 52.381 21.76 0.00 37.33 4.85
7988 8545 6.907853 TCATCATGACCAACTATCCTCTAG 57.092 41.667 0.00 0.00 0.00 2.43
7989 8546 7.675161 TTTCATCATGACCAACTATCCTCTA 57.325 36.000 0.00 0.00 0.00 2.43
7991 8548 7.814264 AATTTCATCATGACCAACTATCCTC 57.186 36.000 0.00 0.00 0.00 3.71
7992 8549 8.274322 TGTAATTTCATCATGACCAACTATCCT 58.726 33.333 0.00 0.00 0.00 3.24
7993 8550 8.450578 TGTAATTTCATCATGACCAACTATCC 57.549 34.615 0.00 0.00 0.00 2.59
7996 8553 8.729756 CAACTGTAATTTCATCATGACCAACTA 58.270 33.333 0.00 0.00 0.00 2.24
7997 8554 7.596494 CAACTGTAATTTCATCATGACCAACT 58.404 34.615 0.00 0.00 0.00 3.16
7998 8555 6.308766 GCAACTGTAATTTCATCATGACCAAC 59.691 38.462 0.00 0.00 0.00 3.77
8003 8560 6.430616 TGACAGCAACTGTAATTTCATCATGA 59.569 34.615 0.00 0.00 45.44 3.07
8004 8561 6.525628 GTGACAGCAACTGTAATTTCATCATG 59.474 38.462 0.00 0.00 45.44 3.07
8005 8562 6.432162 AGTGACAGCAACTGTAATTTCATCAT 59.568 34.615 0.00 0.00 45.44 2.45
8006 8563 5.764686 AGTGACAGCAACTGTAATTTCATCA 59.235 36.000 0.00 0.00 45.44 3.07
8007 8564 6.246420 AGTGACAGCAACTGTAATTTCATC 57.754 37.500 0.00 0.00 45.44 2.92
8010 8568 7.755582 AAAAAGTGACAGCAACTGTAATTTC 57.244 32.000 0.00 0.00 45.44 2.17
8040 8598 6.435591 TGCAGAATTAACCATCCATTAACACA 59.564 34.615 0.00 0.00 0.00 3.72
8046 8604 8.145767 CACATAATGCAGAATTAACCATCCATT 58.854 33.333 0.00 0.00 34.41 3.16
8047 8605 7.288389 ACACATAATGCAGAATTAACCATCCAT 59.712 33.333 0.00 0.00 34.41 3.41
8049 8607 7.042797 ACACATAATGCAGAATTAACCATCC 57.957 36.000 0.00 0.00 34.41 3.51
8051 8609 8.530311 TCAAACACATAATGCAGAATTAACCAT 58.470 29.630 0.00 0.00 34.41 3.55
8052 8610 7.890515 TCAAACACATAATGCAGAATTAACCA 58.109 30.769 0.00 0.00 34.41 3.67
8053 8611 8.755696 TTCAAACACATAATGCAGAATTAACC 57.244 30.769 0.00 0.00 34.41 2.85
8058 8616 9.590451 CCTAATTTCAAACACATAATGCAGAAT 57.410 29.630 0.00 0.00 0.00 2.40
8059 8617 7.545265 GCCTAATTTCAAACACATAATGCAGAA 59.455 33.333 0.00 0.00 0.00 3.02
8060 8618 7.035004 GCCTAATTTCAAACACATAATGCAGA 58.965 34.615 0.00 0.00 0.00 4.26
8061 8619 6.020440 CGCCTAATTTCAAACACATAATGCAG 60.020 38.462 0.00 0.00 0.00 4.41
8062 8620 5.804473 CGCCTAATTTCAAACACATAATGCA 59.196 36.000 0.00 0.00 0.00 3.96
8063 8621 6.020678 GTCGCCTAATTTCAAACACATAATGC 60.021 38.462 0.00 0.00 0.00 3.56
8064 8622 6.472163 GGTCGCCTAATTTCAAACACATAATG 59.528 38.462 0.00 0.00 0.00 1.90
8066 8624 5.391097 CGGTCGCCTAATTTCAAACACATAA 60.391 40.000 0.00 0.00 0.00 1.90
8068 8626 3.119990 CGGTCGCCTAATTTCAAACACAT 60.120 43.478 0.00 0.00 0.00 3.21
8069 8627 2.224549 CGGTCGCCTAATTTCAAACACA 59.775 45.455 0.00 0.00 0.00 3.72
8070 8628 2.846693 CGGTCGCCTAATTTCAAACAC 58.153 47.619 0.00 0.00 0.00 3.32
8085 8716 1.550065 CACATCAGTAGAAGCGGTCG 58.450 55.000 0.00 0.00 0.00 4.79
8089 8720 1.657594 CTGTGCACATCAGTAGAAGCG 59.342 52.381 22.00 0.00 0.00 4.68
8091 8722 4.751600 TGTTTCTGTGCACATCAGTAGAAG 59.248 41.667 22.00 5.23 33.41 2.85
8099 8730 0.953727 TGCCTGTTTCTGTGCACATC 59.046 50.000 22.00 11.67 0.00 3.06
8101 8732 0.394216 ACTGCCTGTTTCTGTGCACA 60.394 50.000 20.37 20.37 0.00 4.57
8102 8733 1.593196 TACTGCCTGTTTCTGTGCAC 58.407 50.000 10.75 10.75 0.00 4.57
8104 8735 3.923017 AATTACTGCCTGTTTCTGTGC 57.077 42.857 0.00 0.00 0.00 4.57
8107 8738 5.947228 TCTGAAATTACTGCCTGTTTCTG 57.053 39.130 0.00 0.00 33.06 3.02
8109 8740 6.072112 TGTTCTGAAATTACTGCCTGTTTC 57.928 37.500 0.00 0.00 0.00 2.78
8114 8745 6.265196 TGTTCATTGTTCTGAAATTACTGCCT 59.735 34.615 0.00 0.00 36.92 4.75
8116 8747 6.088616 GCTGTTCATTGTTCTGAAATTACTGC 59.911 38.462 0.00 0.00 36.92 4.40
8122 8753 7.750229 TCTTAGCTGTTCATTGTTCTGAAAT 57.250 32.000 0.00 0.00 36.92 2.17
8123 8754 7.750229 ATCTTAGCTGTTCATTGTTCTGAAA 57.250 32.000 0.00 0.00 36.92 2.69
8125 8756 7.065085 GCTTATCTTAGCTGTTCATTGTTCTGA 59.935 37.037 0.00 0.00 38.15 3.27
8132 8763 7.870509 TTCATGCTTATCTTAGCTGTTCATT 57.129 32.000 0.00 0.00 41.76 2.57
8134 8765 7.870509 AATTCATGCTTATCTTAGCTGTTCA 57.129 32.000 0.00 0.00 41.76 3.18
8147 8778 5.477984 AGCCAAGTTCTGAAATTCATGCTTA 59.522 36.000 10.91 0.00 0.00 3.09
8157 8788 9.131791 ACTAAAATTTCTAGCCAAGTTCTGAAA 57.868 29.630 0.00 0.00 0.00 2.69
8158 8789 8.691661 ACTAAAATTTCTAGCCAAGTTCTGAA 57.308 30.769 0.00 0.00 0.00 3.02
8159 8790 8.691661 AACTAAAATTTCTAGCCAAGTTCTGA 57.308 30.769 0.00 0.00 0.00 3.27
8160 8791 9.185192 CAAACTAAAATTTCTAGCCAAGTTCTG 57.815 33.333 0.00 0.00 0.00 3.02
8161 8792 8.360390 CCAAACTAAAATTTCTAGCCAAGTTCT 58.640 33.333 0.00 0.00 0.00 3.01
8162 8793 8.141909 ACCAAACTAAAATTTCTAGCCAAGTTC 58.858 33.333 0.00 0.00 0.00 3.01
8163 8794 7.926018 CACCAAACTAAAATTTCTAGCCAAGTT 59.074 33.333 0.00 0.00 0.00 2.66
8164 8795 7.069455 ACACCAAACTAAAATTTCTAGCCAAGT 59.931 33.333 0.00 0.00 0.00 3.16
8165 8796 7.433680 ACACCAAACTAAAATTTCTAGCCAAG 58.566 34.615 0.00 0.00 0.00 3.61
8179 8810 2.626266 TCTCTGAGCGACACCAAACTAA 59.374 45.455 0.00 0.00 0.00 2.24
8180 8811 2.030185 GTCTCTGAGCGACACCAAACTA 60.030 50.000 0.00 0.00 0.00 2.24
8189 8820 0.171455 AACCATCGTCTCTGAGCGAC 59.829 55.000 20.54 6.65 40.03 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.