Multiple sequence alignment - TraesCS4A01G334700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G334700 chr4A 100.000 5990 0 0 1 5990 617848876 617854865 0.000000e+00 11062.0
1 TraesCS4A01G334700 chr4A 99.747 395 1 0 579 973 617843659 617844053 0.000000e+00 725.0
2 TraesCS4A01G334700 chr4A 88.333 180 13 3 1696 1875 572843117 572842946 6.080000e-50 209.0
3 TraesCS4A01G334700 chr4A 93.023 129 9 0 5862 5990 478067446 478067318 7.930000e-44 189.0
4 TraesCS4A01G334700 chr4A 97.059 102 3 0 484 585 617844049 617844150 7.980000e-39 172.0
5 TraesCS4A01G334700 chr4A 90.741 108 8 1 1696 1801 629915464 629915571 6.260000e-30 143.0
6 TraesCS4A01G334700 chr4A 85.833 120 12 5 593 710 80136972 80137088 8.150000e-24 122.0
7 TraesCS4A01G334700 chr4A 100.000 28 0 0 472 499 363088793 363088766 1.100000e-02 52.8
8 TraesCS4A01G334700 chr5D 96.864 1722 43 3 2856 4577 549893037 549891327 0.000000e+00 2870.0
9 TraesCS4A01G334700 chr5D 95.745 987 34 5 1879 2864 549894853 549893874 0.000000e+00 1583.0
10 TraesCS4A01G334700 chr5D 93.094 1086 42 14 4784 5865 549891334 549890278 0.000000e+00 1559.0
11 TraesCS4A01G334700 chr5D 94.959 853 20 8 795 1641 549895686 549894851 0.000000e+00 1315.0
12 TraesCS4A01G334700 chr5D 88.475 295 14 13 1697 1971 390694325 390694031 7.440000e-89 339.0
13 TraesCS4A01G334700 chr5D 86.780 295 19 12 1697 1971 393058099 393058393 1.620000e-80 311.0
14 TraesCS4A01G334700 chr5D 78.804 368 32 19 1696 2041 384474871 384475214 7.870000e-49 206.0
15 TraesCS4A01G334700 chr5D 90.741 108 8 1 1696 1801 538767316 538767209 6.260000e-30 143.0
16 TraesCS4A01G334700 chr5D 100.000 29 0 0 4513 4541 549891282 549891254 3.000000e-03 54.7
17 TraesCS4A01G334700 chr5B 96.447 1576 47 6 3005 4577 701551650 701550081 0.000000e+00 2591.0
18 TraesCS4A01G334700 chr5B 95.643 918 24 5 1443 2346 701553345 701552430 0.000000e+00 1459.0
19 TraesCS4A01G334700 chr5B 95.880 631 20 4 2377 3006 701552435 701551810 0.000000e+00 1016.0
20 TraesCS4A01G334700 chr5B 94.343 548 19 6 891 1430 701554422 701553879 0.000000e+00 830.0
21 TraesCS4A01G334700 chr5B 89.799 598 28 17 4784 5378 701550088 701549521 0.000000e+00 736.0
22 TraesCS4A01G334700 chr5B 87.458 295 17 11 1697 1971 471023084 471022790 7.490000e-84 322.0
23 TraesCS4A01G334700 chr5B 86.942 291 20 9 1697 1971 473116759 473117047 1.620000e-80 311.0
24 TraesCS4A01G334700 chr5B 82.372 312 30 12 1698 1988 693677637 693677330 1.290000e-61 248.0
25 TraesCS4A01G334700 chr5B 89.806 206 0 1 4578 4783 282048098 282048282 1.670000e-60 244.0
26 TraesCS4A01G334700 chr5B 98.361 61 1 0 786 846 701554490 701554430 2.280000e-19 108.0
27 TraesCS4A01G334700 chr5B 100.000 29 0 0 4513 4541 701550036 701550008 3.000000e-03 54.7
28 TraesCS4A01G334700 chr2B 95.197 687 28 5 3891 4577 329462647 329463328 0.000000e+00 1081.0
29 TraesCS4A01G334700 chr2B 91.102 708 45 9 4784 5488 329463321 329464013 0.000000e+00 942.0
30 TraesCS4A01G334700 chr2B 97.260 146 2 2 4576 4721 188260942 188261085 4.640000e-61 246.0
31 TraesCS4A01G334700 chr2B 89.855 207 0 1 4577 4783 247923034 247923219 4.640000e-61 246.0
32 TraesCS4A01G334700 chr1A 99.316 585 4 0 1 585 364292641 364293225 0.000000e+00 1059.0
33 TraesCS4A01G334700 chr1A 93.798 129 8 0 5862 5990 548725806 548725678 1.700000e-45 195.0
34 TraesCS4A01G334700 chr1A 96.907 97 3 0 489 585 364287823 364287919 4.800000e-36 163.0
35 TraesCS4A01G334700 chr1A 93.182 88 5 1 624 710 57739901 57739988 1.750000e-25 128.0
36 TraesCS4A01G334700 chr2A 98.974 585 5 1 1 585 744911275 744911858 0.000000e+00 1046.0
37 TraesCS4A01G334700 chr2A 89.806 206 0 1 4578 4783 615351786 615351970 1.670000e-60 244.0
38 TraesCS4A01G334700 chr2A 90.556 180 13 3 1696 1875 745811668 745811493 1.000000e-57 235.0
39 TraesCS4A01G334700 chr2A 96.907 97 2 1 489 585 744906457 744906552 1.730000e-35 161.0
40 TraesCS4A01G334700 chr2A 86.000 100 10 2 622 717 675489390 675489291 2.950000e-18 104.0
41 TraesCS4A01G334700 chr7B 77.951 576 119 8 13 585 743256599 743257169 2.660000e-93 353.0
42 TraesCS4A01G334700 chr7B 93.023 129 9 0 5862 5990 132142967 132142839 7.930000e-44 189.0
43 TraesCS4A01G334700 chr7B 93.519 108 7 0 3126 3233 570465364 570465257 1.730000e-35 161.0
44 TraesCS4A01G334700 chr7B 95.876 97 4 0 489 585 743251811 743251907 2.230000e-34 158.0
45 TraesCS4A01G334700 chr7B 91.071 56 2 2 581 635 730377657 730377604 8.330000e-09 73.1
46 TraesCS4A01G334700 chr2D 85.319 361 32 10 1696 2039 87754187 87754543 2.660000e-93 353.0
47 TraesCS4A01G334700 chr2D 89.011 91 7 3 622 710 510222909 510222820 6.350000e-20 110.0
48 TraesCS4A01G334700 chr2D 85.057 87 11 2 634 719 527268036 527268121 2.970000e-13 87.9
49 TraesCS4A01G334700 chr5A 87.458 295 17 12 1697 1971 494231174 494230880 7.490000e-84 322.0
50 TraesCS4A01G334700 chr5A 89.151 212 2 7 4571 4782 268643370 268643180 1.670000e-60 244.0
51 TraesCS4A01G334700 chr5A 89.806 206 0 1 4578 4783 321925264 321925080 1.670000e-60 244.0
52 TraesCS4A01G334700 chr5A 86.598 97 12 1 624 719 472081602 472081506 8.210000e-19 106.0
53 TraesCS4A01G334700 chr4D 80.335 478 46 29 2261 2708 50059682 50059223 9.690000e-83 318.0
54 TraesCS4A01G334700 chr4D 90.164 122 9 3 3120 3240 441486703 441486822 8.040000e-34 156.0
55 TraesCS4A01G334700 chr4D 87.356 87 10 1 624 709 359845910 359845824 1.370000e-16 99.0
56 TraesCS4A01G334700 chr4D 73.312 311 63 15 244 544 464539853 464539553 4.940000e-16 97.1
57 TraesCS4A01G334700 chr7A 83.642 324 31 13 1696 1997 667232012 667232335 9.830000e-73 285.0
58 TraesCS4A01G334700 chr7A 90.164 183 15 1 1696 1875 400068954 400068772 1.000000e-57 235.0
59 TraesCS4A01G334700 chr7A 93.023 129 9 0 5862 5990 167251938 167252066 7.930000e-44 189.0
60 TraesCS4A01G334700 chr7A 87.059 85 10 1 627 710 549383051 549383135 1.780000e-15 95.3
61 TraesCS4A01G334700 chr4B 89.623 212 1 1 4573 4784 564389481 564389671 3.580000e-62 250.0
62 TraesCS4A01G334700 chr4B 89.855 207 0 1 4577 4783 54028415 54028600 4.640000e-61 246.0
63 TraesCS4A01G334700 chrUn 89.524 210 1 1 4578 4787 5429632 5429820 4.640000e-61 246.0
64 TraesCS4A01G334700 chrUn 93.023 129 9 0 5862 5990 82662244 82662116 7.930000e-44 189.0
65 TraesCS4A01G334700 chrUn 93.023 129 9 0 5862 5990 119060471 119060343 7.930000e-44 189.0
66 TraesCS4A01G334700 chr3B 89.202 213 1 2 4572 4783 689512970 689513161 4.640000e-61 246.0
67 TraesCS4A01G334700 chr3B 89.806 206 0 1 4578 4783 43716566 43716382 1.670000e-60 244.0
68 TraesCS4A01G334700 chr3B 79.532 342 33 19 2375 2689 54591974 54591643 6.080000e-50 209.0
69 TraesCS4A01G334700 chr3B 79.412 340 33 19 2376 2689 54537820 54537492 7.870000e-49 206.0
70 TraesCS4A01G334700 chr3B 88.636 88 9 1 622 708 434728467 434728380 8.210000e-19 106.0
71 TraesCS4A01G334700 chr3A 96.644 149 2 3 4578 4726 340285041 340284896 1.670000e-60 244.0
72 TraesCS4A01G334700 chr3A 89.806 206 0 1 4578 4783 625241547 625241731 1.670000e-60 244.0
73 TraesCS4A01G334700 chr3A 88.889 117 12 1 3117 3233 336604526 336604641 6.260000e-30 143.0
74 TraesCS4A01G334700 chr6A 97.222 144 2 2 4578 4721 97765371 97765230 6.000000e-60 243.0
75 TraesCS4A01G334700 chr6A 86.076 79 9 2 625 702 558951462 558951539 3.850000e-12 84.2
76 TraesCS4A01G334700 chr1D 81.379 290 40 12 1589 1868 324747209 324746924 2.170000e-54 224.0
77 TraesCS4A01G334700 chr1D 90.826 109 10 0 3126 3234 169065296 169065404 4.840000e-31 147.0
78 TraesCS4A01G334700 chr1D 87.640 89 10 1 623 710 332416272 332416184 1.060000e-17 102.0
79 TraesCS4A01G334700 chr6B 93.798 129 8 0 5862 5990 45201632 45201504 1.700000e-45 195.0
80 TraesCS4A01G334700 chr6B 93.023 129 9 0 5862 5990 142690173 142690045 7.930000e-44 189.0
81 TraesCS4A01G334700 chr6B 91.818 110 9 0 3125 3234 617173711 617173820 2.890000e-33 154.0
82 TraesCS4A01G334700 chr6B 90.435 115 11 0 3120 3234 281335957 281336071 1.040000e-32 152.0
83 TraesCS4A01G334700 chr1B 93.023 129 9 0 5862 5990 488043083 488043211 7.930000e-44 189.0
84 TraesCS4A01G334700 chr1B 91.071 112 10 0 3126 3237 249625004 249624893 1.040000e-32 152.0
85 TraesCS4A01G334700 chr1B 89.796 98 9 1 623 719 381380279 381380182 2.270000e-24 124.0
86 TraesCS4A01G334700 chr1B 85.714 91 11 2 621 710 639924857 639924768 1.780000e-15 95.3
87 TraesCS4A01G334700 chr3D 89.051 137 10 4 1734 1868 105428600 105428733 1.340000e-36 165.0
88 TraesCS4A01G334700 chr3D 86.538 104 13 1 1905 2008 105428721 105428823 4.910000e-21 113.0
89 TraesCS4A01G334700 chr6D 90.698 86 7 1 635 719 17506130 17506045 4.910000e-21 113.0
90 TraesCS4A01G334700 chr6D 90.566 53 4 1 575 626 6140306 6140358 1.080000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G334700 chr4A 617848876 617854865 5989 False 11062.000000 11062 100.000000 1 5990 1 chr4A.!!$F2 5989
1 TraesCS4A01G334700 chr5D 549890278 549895686 5408 True 1476.340000 2870 96.132400 795 5865 5 chr5D.!!$R3 5070
2 TraesCS4A01G334700 chr5B 701549521 701554490 4969 True 970.671429 2591 95.781857 786 5378 7 chr5B.!!$R3 4592
3 TraesCS4A01G334700 chr2B 329462647 329464013 1366 False 1011.500000 1081 93.149500 3891 5488 2 chr2B.!!$F3 1597
4 TraesCS4A01G334700 chr1A 364292641 364293225 584 False 1059.000000 1059 99.316000 1 585 1 chr1A.!!$F3 584
5 TraesCS4A01G334700 chr2A 744911275 744911858 583 False 1046.000000 1046 98.974000 1 585 1 chr2A.!!$F3 584
6 TraesCS4A01G334700 chr7B 743256599 743257169 570 False 353.000000 353 77.951000 13 585 1 chr7B.!!$F2 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
689 691 0.038983 TCGACGCGAAGAATCCAACA 60.039 50.0 15.93 0.00 31.06 3.33 F
728 730 0.173935 TATACACACGCGAAGGTGGG 59.826 55.0 25.16 13.66 46.77 4.61 F
741 743 0.252696 AGGTGGGAGTGACCTATGCA 60.253 55.0 0.00 0.00 42.35 3.96 F
1363 1375 0.391597 TCTTTCACCTGGACACCGTC 59.608 55.0 0.00 0.00 0.00 4.79 F
1365 1377 0.391597 TTTCACCTGGACACCGTCTC 59.608 55.0 0.00 0.00 32.47 3.36 F
1366 1378 0.469331 TTCACCTGGACACCGTCTCT 60.469 55.0 0.00 0.00 32.47 3.10 F
1962 2498 0.543174 GCCTGAGAGGTATCGGGGAT 60.543 60.0 1.71 0.00 44.70 3.85 F
3843 5401 0.035056 CTGAAGTTGGGCCAGTAGGG 60.035 60.0 6.23 0.00 40.85 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2223 2770 2.005451 CGGATTCAGCAGAAGTTCAGG 58.995 52.381 5.50 0.0 37.14 3.86 R
2392 2941 4.464951 TCACTACCGTCTAATCACCACAAT 59.535 41.667 0.00 0.0 0.00 2.71 R
2451 3000 6.186957 AGGAATGAACAATACTGGTGCATAA 58.813 36.000 0.00 0.0 0.00 1.90 R
2928 4325 5.998454 AATCAGAAATTCTAGCATGTCGG 57.002 39.130 0.00 0.0 0.00 4.79 R
3409 4967 5.048504 TGAATCACCATTCTGAAGAAACTGC 60.049 40.000 0.00 0.0 39.49 4.40 R
3635 5193 0.737219 CATCTGCCTGCTTAACCTGC 59.263 55.000 0.00 0.0 0.00 4.85 R
4131 5689 3.738791 CCCGCAAGTACCAAAACAAATTC 59.261 43.478 0.00 0.0 0.00 2.17 R
5604 7389 0.037326 TCCTGCGCAAACTAGGTCAG 60.037 55.000 13.05 0.0 33.30 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 1.207791 CACCAGAGCCTCCACCTTAT 58.792 55.000 0.00 0.00 0.00 1.73
404 406 2.050895 CCTGATCGACCGCTAGCG 60.051 66.667 29.93 29.93 39.44 4.26
553 555 2.353704 CCCCGATTTCATATAGCAGCGA 60.354 50.000 0.00 0.00 0.00 4.93
589 591 5.358298 ACAAGTTCAAGGATTTACTTCGC 57.642 39.130 0.00 0.00 30.55 4.70
590 592 4.084013 ACAAGTTCAAGGATTTACTTCGCG 60.084 41.667 0.00 0.00 30.55 5.87
591 593 3.000727 AGTTCAAGGATTTACTTCGCGG 58.999 45.455 6.13 0.00 0.00 6.46
592 594 2.018542 TCAAGGATTTACTTCGCGGG 57.981 50.000 6.13 1.80 0.00 6.13
593 595 1.551430 TCAAGGATTTACTTCGCGGGA 59.449 47.619 6.13 0.00 0.00 5.14
594 596 1.933853 CAAGGATTTACTTCGCGGGAG 59.066 52.381 6.13 7.63 0.00 4.30
595 597 0.464452 AGGATTTACTTCGCGGGAGG 59.536 55.000 6.13 10.16 0.00 4.30
596 598 1.158484 GGATTTACTTCGCGGGAGGC 61.158 60.000 11.66 0.00 38.69 4.70
597 599 0.461339 GATTTACTTCGCGGGAGGCA 60.461 55.000 11.66 0.00 43.84 4.75
598 600 0.743345 ATTTACTTCGCGGGAGGCAC 60.743 55.000 11.66 0.00 43.84 5.01
599 601 2.102109 TTTACTTCGCGGGAGGCACA 62.102 55.000 11.66 0.00 43.84 4.57
600 602 2.501223 TTACTTCGCGGGAGGCACAG 62.501 60.000 11.66 4.09 43.84 3.66
601 603 4.379243 CTTCGCGGGAGGCACAGT 62.379 66.667 6.13 0.00 43.84 3.55
602 604 4.373116 TTCGCGGGAGGCACAGTC 62.373 66.667 6.13 0.00 43.84 3.51
614 616 2.145225 CACAGTCGTGCCTCTTTCG 58.855 57.895 0.00 0.00 36.06 3.46
615 617 1.006102 ACAGTCGTGCCTCTTTCGG 60.006 57.895 0.00 0.00 0.00 4.30
616 618 1.289066 CAGTCGTGCCTCTTTCGGA 59.711 57.895 0.00 0.00 0.00 4.55
617 619 0.108615 CAGTCGTGCCTCTTTCGGAT 60.109 55.000 0.00 0.00 0.00 4.18
618 620 1.134367 CAGTCGTGCCTCTTTCGGATA 59.866 52.381 0.00 0.00 0.00 2.59
619 621 1.405821 AGTCGTGCCTCTTTCGGATAG 59.594 52.381 0.00 0.00 0.00 2.08
620 622 0.744874 TCGTGCCTCTTTCGGATAGG 59.255 55.000 0.00 0.00 0.00 2.57
621 623 0.744874 CGTGCCTCTTTCGGATAGGA 59.255 55.000 5.91 0.00 31.64 2.94
622 624 1.136305 CGTGCCTCTTTCGGATAGGAA 59.864 52.381 5.91 0.00 31.64 3.36
623 625 2.418197 CGTGCCTCTTTCGGATAGGAAA 60.418 50.000 5.91 0.00 34.87 3.13
624 626 3.606687 GTGCCTCTTTCGGATAGGAAAA 58.393 45.455 5.91 0.00 35.64 2.29
625 627 4.007659 GTGCCTCTTTCGGATAGGAAAAA 58.992 43.478 5.91 0.00 35.64 1.94
649 651 7.504924 AAAAGATCGTCAAAACCTATCAACA 57.495 32.000 0.00 0.00 0.00 3.33
650 652 7.687941 AAAGATCGTCAAAACCTATCAACAT 57.312 32.000 0.00 0.00 0.00 2.71
651 653 8.786826 AAAGATCGTCAAAACCTATCAACATA 57.213 30.769 0.00 0.00 0.00 2.29
652 654 8.786826 AAGATCGTCAAAACCTATCAACATAA 57.213 30.769 0.00 0.00 0.00 1.90
653 655 8.786826 AGATCGTCAAAACCTATCAACATAAA 57.213 30.769 0.00 0.00 0.00 1.40
654 656 9.226606 AGATCGTCAAAACCTATCAACATAAAA 57.773 29.630 0.00 0.00 0.00 1.52
657 659 9.226606 TCGTCAAAACCTATCAACATAAAATCT 57.773 29.630 0.00 0.00 0.00 2.40
676 678 7.452630 AAATCTAGTTTAAAGATCTCGACGC 57.547 36.000 0.00 0.00 32.48 5.19
677 679 4.585364 TCTAGTTTAAAGATCTCGACGCG 58.415 43.478 3.53 3.53 0.00 6.01
678 680 3.482722 AGTTTAAAGATCTCGACGCGA 57.517 42.857 15.93 0.00 0.00 5.87
679 681 3.829948 AGTTTAAAGATCTCGACGCGAA 58.170 40.909 15.93 0.00 34.74 4.70
680 682 3.852536 AGTTTAAAGATCTCGACGCGAAG 59.147 43.478 15.93 7.40 34.74 3.79
681 683 3.752412 TTAAAGATCTCGACGCGAAGA 57.248 42.857 15.93 13.19 34.74 2.87
682 684 2.631418 AAAGATCTCGACGCGAAGAA 57.369 45.000 15.93 3.26 34.74 2.52
683 685 2.853731 AAGATCTCGACGCGAAGAAT 57.146 45.000 15.93 7.87 34.74 2.40
684 686 2.392933 AGATCTCGACGCGAAGAATC 57.607 50.000 15.93 15.29 34.74 2.52
685 687 1.002251 AGATCTCGACGCGAAGAATCC 60.002 52.381 15.93 6.66 34.74 3.01
686 688 0.738975 ATCTCGACGCGAAGAATCCA 59.261 50.000 15.93 0.00 34.74 3.41
687 689 0.524414 TCTCGACGCGAAGAATCCAA 59.476 50.000 15.93 0.00 34.74 3.53
688 690 0.640768 CTCGACGCGAAGAATCCAAC 59.359 55.000 15.93 0.00 34.74 3.77
689 691 0.038983 TCGACGCGAAGAATCCAACA 60.039 50.000 15.93 0.00 31.06 3.33
690 692 0.787787 CGACGCGAAGAATCCAACAA 59.212 50.000 15.93 0.00 0.00 2.83
691 693 1.393539 CGACGCGAAGAATCCAACAAT 59.606 47.619 15.93 0.00 0.00 2.71
692 694 2.774007 GACGCGAAGAATCCAACAATG 58.226 47.619 15.93 0.00 0.00 2.82
693 695 2.415168 GACGCGAAGAATCCAACAATGA 59.585 45.455 15.93 0.00 0.00 2.57
694 696 2.811431 ACGCGAAGAATCCAACAATGAA 59.189 40.909 15.93 0.00 0.00 2.57
695 697 3.252215 ACGCGAAGAATCCAACAATGAAA 59.748 39.130 15.93 0.00 0.00 2.69
696 698 4.225984 CGCGAAGAATCCAACAATGAAAA 58.774 39.130 0.00 0.00 0.00 2.29
697 699 4.088496 CGCGAAGAATCCAACAATGAAAAC 59.912 41.667 0.00 0.00 0.00 2.43
698 700 4.088496 GCGAAGAATCCAACAATGAAAACG 59.912 41.667 0.00 0.00 0.00 3.60
699 701 4.616802 CGAAGAATCCAACAATGAAAACGG 59.383 41.667 0.00 0.00 0.00 4.44
700 702 5.528870 GAAGAATCCAACAATGAAAACGGT 58.471 37.500 0.00 0.00 0.00 4.83
701 703 5.529581 AGAATCCAACAATGAAAACGGTT 57.470 34.783 0.00 0.00 0.00 4.44
702 704 5.528870 AGAATCCAACAATGAAAACGGTTC 58.471 37.500 0.00 0.00 0.00 3.62
703 705 3.341857 TCCAACAATGAAAACGGTTCG 57.658 42.857 0.00 0.00 0.00 3.95
704 706 2.943690 TCCAACAATGAAAACGGTTCGA 59.056 40.909 0.00 0.00 0.00 3.71
705 707 3.002862 TCCAACAATGAAAACGGTTCGAG 59.997 43.478 0.00 0.00 0.00 4.04
706 708 3.002862 CCAACAATGAAAACGGTTCGAGA 59.997 43.478 0.00 0.00 0.00 4.04
707 709 4.320202 CCAACAATGAAAACGGTTCGAGAT 60.320 41.667 0.00 0.00 0.00 2.75
708 710 5.212194 CAACAATGAAAACGGTTCGAGATT 58.788 37.500 0.00 0.00 0.00 2.40
709 711 5.432885 ACAATGAAAACGGTTCGAGATTT 57.567 34.783 0.00 0.00 0.00 2.17
710 712 6.548441 ACAATGAAAACGGTTCGAGATTTA 57.452 33.333 0.00 0.00 0.00 1.40
711 713 7.141100 ACAATGAAAACGGTTCGAGATTTAT 57.859 32.000 0.00 0.00 0.00 1.40
712 714 8.259049 ACAATGAAAACGGTTCGAGATTTATA 57.741 30.769 0.00 0.00 0.00 0.98
713 715 8.173130 ACAATGAAAACGGTTCGAGATTTATAC 58.827 33.333 0.00 0.00 0.00 1.47
714 716 7.837202 ATGAAAACGGTTCGAGATTTATACA 57.163 32.000 0.00 0.00 0.00 2.29
715 717 7.052565 TGAAAACGGTTCGAGATTTATACAC 57.947 36.000 0.00 0.00 0.00 2.90
716 718 6.645827 TGAAAACGGTTCGAGATTTATACACA 59.354 34.615 0.00 0.00 0.00 3.72
717 719 6.399204 AAACGGTTCGAGATTTATACACAC 57.601 37.500 0.00 0.00 0.00 3.82
718 720 4.100529 ACGGTTCGAGATTTATACACACG 58.899 43.478 0.00 0.00 0.00 4.49
719 721 3.061403 CGGTTCGAGATTTATACACACGC 60.061 47.826 0.00 0.00 0.00 5.34
720 722 3.061403 GGTTCGAGATTTATACACACGCG 60.061 47.826 3.53 3.53 0.00 6.01
721 723 3.678915 TCGAGATTTATACACACGCGA 57.321 42.857 15.93 0.00 0.00 5.87
722 724 4.018649 TCGAGATTTATACACACGCGAA 57.981 40.909 15.93 0.00 31.19 4.70
723 725 4.033019 TCGAGATTTATACACACGCGAAG 58.967 43.478 15.93 7.57 31.19 3.79
724 726 3.179795 CGAGATTTATACACACGCGAAGG 59.820 47.826 15.93 4.07 0.00 3.46
725 727 4.110482 GAGATTTATACACACGCGAAGGT 58.890 43.478 15.93 9.96 0.00 3.50
726 728 3.863424 AGATTTATACACACGCGAAGGTG 59.137 43.478 15.93 19.96 43.54 4.00
727 729 1.999048 TTATACACACGCGAAGGTGG 58.001 50.000 25.16 13.14 42.23 4.61
728 730 0.173935 TATACACACGCGAAGGTGGG 59.826 55.000 25.16 13.66 46.77 4.61
729 731 1.537814 ATACACACGCGAAGGTGGGA 61.538 55.000 25.16 16.86 44.15 4.37
730 732 2.149803 TACACACGCGAAGGTGGGAG 62.150 60.000 25.16 8.18 44.15 4.30
731 733 3.231736 ACACGCGAAGGTGGGAGT 61.232 61.111 15.93 0.00 42.23 3.85
732 734 2.738521 CACGCGAAGGTGGGAGTG 60.739 66.667 15.93 0.00 34.27 3.51
733 735 2.915659 ACGCGAAGGTGGGAGTGA 60.916 61.111 15.93 0.00 0.00 3.41
734 736 2.432628 CGCGAAGGTGGGAGTGAC 60.433 66.667 0.00 0.00 0.00 3.67
735 737 2.047179 GCGAAGGTGGGAGTGACC 60.047 66.667 0.00 0.00 38.08 4.02
736 738 2.584391 GCGAAGGTGGGAGTGACCT 61.584 63.158 0.00 0.00 46.36 3.85
737 739 1.255667 GCGAAGGTGGGAGTGACCTA 61.256 60.000 0.00 0.00 43.42 3.08
738 740 1.486211 CGAAGGTGGGAGTGACCTAT 58.514 55.000 0.00 0.00 43.42 2.57
739 741 1.137086 CGAAGGTGGGAGTGACCTATG 59.863 57.143 0.00 0.00 43.42 2.23
740 742 0.912486 AAGGTGGGAGTGACCTATGC 59.088 55.000 0.00 0.00 43.42 3.14
741 743 0.252696 AGGTGGGAGTGACCTATGCA 60.253 55.000 0.00 0.00 42.35 3.96
742 744 0.839946 GGTGGGAGTGACCTATGCAT 59.160 55.000 3.79 3.79 38.98 3.96
743 745 1.212935 GGTGGGAGTGACCTATGCATT 59.787 52.381 3.54 0.00 38.98 3.56
744 746 2.357154 GGTGGGAGTGACCTATGCATTT 60.357 50.000 3.54 0.00 38.98 2.32
745 747 3.118038 GGTGGGAGTGACCTATGCATTTA 60.118 47.826 3.54 0.00 38.98 1.40
746 748 4.446311 GGTGGGAGTGACCTATGCATTTAT 60.446 45.833 3.54 0.00 38.98 1.40
747 749 5.133221 GTGGGAGTGACCTATGCATTTATT 58.867 41.667 3.54 0.00 38.98 1.40
748 750 5.594317 GTGGGAGTGACCTATGCATTTATTT 59.406 40.000 3.54 0.00 38.98 1.40
749 751 6.770785 GTGGGAGTGACCTATGCATTTATTTA 59.229 38.462 3.54 0.00 38.98 1.40
750 752 7.448469 GTGGGAGTGACCTATGCATTTATTTAT 59.552 37.037 3.54 0.00 38.98 1.40
751 753 8.004215 TGGGAGTGACCTATGCATTTATTTATT 58.996 33.333 3.54 0.00 38.98 1.40
752 754 8.860088 GGGAGTGACCTATGCATTTATTTATTT 58.140 33.333 3.54 0.00 38.98 1.40
774 776 7.687941 TTTATTTTTAGAAGAGTGCTCCTGG 57.312 36.000 0.00 0.00 0.00 4.45
775 777 4.706842 TTTTTAGAAGAGTGCTCCTGGT 57.293 40.909 0.00 0.00 0.00 4.00
776 778 3.963428 TTTAGAAGAGTGCTCCTGGTC 57.037 47.619 0.00 0.00 0.00 4.02
777 779 2.604912 TAGAAGAGTGCTCCTGGTCA 57.395 50.000 0.00 0.00 0.00 4.02
778 780 0.972883 AGAAGAGTGCTCCTGGTCAC 59.027 55.000 11.85 11.85 0.00 3.67
779 781 0.972883 GAAGAGTGCTCCTGGTCACT 59.027 55.000 18.94 18.94 45.32 3.41
780 782 0.683973 AAGAGTGCTCCTGGTCACTG 59.316 55.000 22.16 0.66 42.97 3.66
781 783 1.375268 GAGTGCTCCTGGTCACTGC 60.375 63.158 22.16 13.28 42.97 4.40
782 784 2.740055 GTGCTCCTGGTCACTGCG 60.740 66.667 12.30 0.00 0.00 5.18
783 785 4.687215 TGCTCCTGGTCACTGCGC 62.687 66.667 0.00 0.00 0.00 6.09
1237 1248 3.989167 CGGCAATTTCTTGATTTGCTCAA 59.011 39.130 14.20 0.00 41.84 3.02
1248 1260 8.583810 TCTTGATTTGCTCAAAGAGAAAATTG 57.416 30.769 12.86 7.96 45.02 2.32
1276 1288 1.008538 GTGCTTGTTCCTTGTGCCG 60.009 57.895 0.00 0.00 0.00 5.69
1363 1375 0.391597 TCTTTCACCTGGACACCGTC 59.608 55.000 0.00 0.00 0.00 4.79
1364 1376 0.393077 CTTTCACCTGGACACCGTCT 59.607 55.000 0.00 0.00 32.47 4.18
1365 1377 0.391597 TTTCACCTGGACACCGTCTC 59.608 55.000 0.00 0.00 32.47 3.36
1366 1378 0.469331 TTCACCTGGACACCGTCTCT 60.469 55.000 0.00 0.00 32.47 3.10
1367 1379 1.179174 TCACCTGGACACCGTCTCTG 61.179 60.000 0.00 0.00 32.47 3.35
1386 1398 4.318332 TCTGTATTCAGAGCTTGTGTTGG 58.682 43.478 0.00 0.00 44.58 3.77
1436 1448 6.546403 AGACCAGTAGAAGATTCTGCGTATTA 59.454 38.462 5.34 0.00 43.51 0.98
1637 2173 1.001268 CCAGTATGAGCGCGATACAGT 60.001 52.381 25.20 10.39 39.69 3.55
1750 2286 8.818141 TTAGCATATATTTAGTCAGTGCAGTC 57.182 34.615 0.00 0.00 33.80 3.51
1795 2331 4.692228 TGATTCCAACAAAAGCAAGAACC 58.308 39.130 0.00 0.00 0.00 3.62
1833 2369 5.167845 AGCCGCAATTTACCAAACATAAAG 58.832 37.500 0.00 0.00 0.00 1.85
1962 2498 0.543174 GCCTGAGAGGTATCGGGGAT 60.543 60.000 1.71 0.00 44.70 3.85
1988 2535 5.011090 TGGTGAAAGAATCAGTATCGGAG 57.989 43.478 0.00 0.00 39.19 4.63
2157 2704 2.285743 ACCTCCCCTCCCTGAAGC 60.286 66.667 0.00 0.00 0.00 3.86
2193 2740 6.317088 AGTAAATCATGTTTTGCTGACATCG 58.683 36.000 16.18 0.00 35.64 3.84
2271 2818 8.921353 AAGGGAGATTTCAGATATTGATTCTG 57.079 34.615 0.00 0.00 41.61 3.02
2357 2906 3.250744 TGCGTTCTCCTTTTCTCATACG 58.749 45.455 0.00 0.00 0.00 3.06
2451 3000 8.050778 TGAAATGCCTCTTTGTAATATTTCGT 57.949 30.769 0.00 0.00 36.41 3.85
2538 3087 7.421530 TTCTTTACTGTATTGTGAAGTGAGC 57.578 36.000 0.00 0.00 35.75 4.26
2542 3091 4.960938 ACTGTATTGTGAAGTGAGCAGAA 58.039 39.130 0.00 0.00 0.00 3.02
2543 3092 5.555017 ACTGTATTGTGAAGTGAGCAGAAT 58.445 37.500 0.00 0.00 34.23 2.40
2627 3178 9.688091 TCTAACAGATACACTCTTCATTAGACT 57.312 33.333 0.00 0.00 31.51 3.24
2745 3296 8.553085 TCTTTCATCTTTCATCCTGTCCTATA 57.447 34.615 0.00 0.00 0.00 1.31
2746 3297 8.646004 TCTTTCATCTTTCATCCTGTCCTATAG 58.354 37.037 0.00 0.00 0.00 1.31
2835 3387 3.545703 GCACTGATGCCAATTAGGTACT 58.454 45.455 0.00 0.00 46.97 2.73
2928 4325 5.414454 TGTACTATTCAAATGGCTGTGAACC 59.586 40.000 0.00 0.00 36.62 3.62
2965 4362 9.586150 GAATTTCTGATTTATGTACATGCGTAG 57.414 33.333 18.81 9.91 0.00 3.51
3072 4630 9.899661 TGCCTATAATTAAATAACTCGGCATAT 57.100 29.630 0.00 0.00 38.73 1.78
3409 4967 9.837525 CTCTGGAGATGAACTTGAAATAAAAAG 57.162 33.333 0.00 0.00 0.00 2.27
3556 5114 4.770795 AGTGAACAATAGCTGGTGGATAC 58.229 43.478 0.00 0.00 0.00 2.24
3604 5162 6.124340 TGTAGCTCAATCATTTGTGATCCAT 58.876 36.000 0.00 0.00 34.32 3.41
3798 5356 7.790027 TCTGTACCTCTAGTAATCGACTACTT 58.210 38.462 12.32 0.00 39.81 2.24
3843 5401 0.035056 CTGAAGTTGGGCCAGTAGGG 60.035 60.000 6.23 0.00 40.85 3.53
3875 5433 9.166222 TGATACTAGGGGATTACACATAATTGT 57.834 33.333 0.00 0.00 36.15 2.71
3922 5480 5.163499 CCGCTCTGAAAGTTAAGAGGTCTAT 60.163 44.000 14.31 0.00 40.30 1.98
3991 5549 5.519927 GTGGTGAAACTGGAAATTTCAAGTG 59.480 40.000 25.58 11.80 45.19 3.16
4000 5558 7.555087 ACTGGAAATTTCAAGTGTCAAATTGA 58.445 30.769 24.53 0.00 39.93 2.57
4099 5657 5.862924 TTCGAGTTTTCCATCTTGATGAC 57.137 39.130 11.76 2.77 0.00 3.06
4103 5661 5.163814 CGAGTTTTCCATCTTGATGACCTTC 60.164 44.000 11.76 2.37 0.00 3.46
4131 5689 3.807622 ACGTTTATTAGCCATGTGGATCG 59.192 43.478 2.55 0.00 37.39 3.69
4151 5709 4.283678 TCGAATTTGTTTTGGTACTTGCG 58.716 39.130 0.00 0.00 0.00 4.85
4172 5730 3.938963 CGGGAATGTTAGTGTACAGCATT 59.061 43.478 0.00 5.27 33.14 3.56
4405 5965 4.530710 ATGTTTGTCTTACGTGCCTCTA 57.469 40.909 0.00 0.00 0.00 2.43
4406 5966 4.530710 TGTTTGTCTTACGTGCCTCTAT 57.469 40.909 0.00 0.00 0.00 1.98
4568 6130 6.142817 CCCATTTTACAAGTGAAGAAGAACG 58.857 40.000 0.00 0.00 0.00 3.95
4569 6131 6.017440 CCCATTTTACAAGTGAAGAAGAACGA 60.017 38.462 0.00 0.00 0.00 3.85
4570 6132 7.414436 CCATTTTACAAGTGAAGAAGAACGAA 58.586 34.615 0.00 0.00 0.00 3.85
4571 6133 7.913297 CCATTTTACAAGTGAAGAAGAACGAAA 59.087 33.333 0.00 0.00 0.00 3.46
4572 6134 9.450807 CATTTTACAAGTGAAGAAGAACGAAAT 57.549 29.630 0.00 0.00 0.00 2.17
4573 6135 8.835467 TTTTACAAGTGAAGAAGAACGAAATG 57.165 30.769 0.00 0.00 0.00 2.32
4574 6136 4.848757 ACAAGTGAAGAAGAACGAAATGC 58.151 39.130 0.00 0.00 0.00 3.56
4575 6137 4.335315 ACAAGTGAAGAAGAACGAAATGCA 59.665 37.500 0.00 0.00 0.00 3.96
4576 6138 4.739046 AGTGAAGAAGAACGAAATGCAG 57.261 40.909 0.00 0.00 0.00 4.41
4577 6139 3.058639 AGTGAAGAAGAACGAAATGCAGC 60.059 43.478 0.00 0.00 0.00 5.25
4578 6140 3.058639 GTGAAGAAGAACGAAATGCAGCT 60.059 43.478 0.00 0.00 0.00 4.24
4579 6141 3.187227 TGAAGAAGAACGAAATGCAGCTC 59.813 43.478 0.00 0.00 0.00 4.09
4580 6142 3.051081 AGAAGAACGAAATGCAGCTCT 57.949 42.857 0.00 0.00 0.00 4.09
4581 6143 2.740981 AGAAGAACGAAATGCAGCTCTG 59.259 45.455 0.00 0.00 0.00 3.35
4582 6144 2.175878 AGAACGAAATGCAGCTCTGT 57.824 45.000 0.00 0.00 0.00 3.41
4583 6145 2.498167 AGAACGAAATGCAGCTCTGTT 58.502 42.857 0.00 0.60 0.00 3.16
4584 6146 2.880890 AGAACGAAATGCAGCTCTGTTT 59.119 40.909 0.00 0.00 0.00 2.83
4585 6147 3.316308 AGAACGAAATGCAGCTCTGTTTT 59.684 39.130 0.00 0.21 0.00 2.43
4586 6148 3.715628 ACGAAATGCAGCTCTGTTTTT 57.284 38.095 0.00 0.00 0.00 1.94
4587 6149 4.829064 ACGAAATGCAGCTCTGTTTTTA 57.171 36.364 0.00 0.00 0.00 1.52
4588 6150 5.181690 ACGAAATGCAGCTCTGTTTTTAA 57.818 34.783 0.00 0.00 0.00 1.52
4589 6151 5.215160 ACGAAATGCAGCTCTGTTTTTAAG 58.785 37.500 0.00 1.44 0.00 1.85
4590 6152 4.618489 CGAAATGCAGCTCTGTTTTTAAGG 59.382 41.667 0.00 0.00 0.00 2.69
4591 6153 3.582714 ATGCAGCTCTGTTTTTAAGGC 57.417 42.857 0.00 0.00 0.00 4.35
4592 6154 1.266718 TGCAGCTCTGTTTTTAAGGCG 59.733 47.619 0.00 0.00 0.00 5.52
4593 6155 1.266989 GCAGCTCTGTTTTTAAGGCGT 59.733 47.619 0.00 0.00 0.00 5.68
4594 6156 2.665794 GCAGCTCTGTTTTTAAGGCGTC 60.666 50.000 0.00 0.00 0.00 5.19
4595 6157 2.095718 CAGCTCTGTTTTTAAGGCGTCC 60.096 50.000 0.00 0.00 0.00 4.79
4596 6158 1.199327 GCTCTGTTTTTAAGGCGTCCC 59.801 52.381 0.00 0.00 0.00 4.46
4597 6159 1.463444 CTCTGTTTTTAAGGCGTCCCG 59.537 52.381 0.00 0.00 35.76 5.14
4609 6171 4.699522 GTCCCGCCTTGGACGCTT 62.700 66.667 0.00 0.00 44.98 4.68
4610 6172 2.998480 TCCCGCCTTGGACGCTTA 60.998 61.111 0.00 0.00 42.00 3.09
4611 6173 2.511600 CCCGCCTTGGACGCTTAG 60.512 66.667 0.00 0.00 42.00 2.18
4612 6174 2.511600 CCGCCTTGGACGCTTAGG 60.512 66.667 0.00 0.00 42.00 2.69
4623 6185 4.014065 GCTTAGGCGACGCTTAGG 57.986 61.111 20.77 17.82 0.00 2.69
4624 6186 2.238437 GCTTAGGCGACGCTTAGGC 61.238 63.158 25.71 25.71 36.29 3.93
4653 6215 3.053291 CCGCCAGCGCCTTACAAA 61.053 61.111 2.29 0.00 38.24 2.83
4654 6216 2.406616 CCGCCAGCGCCTTACAAAT 61.407 57.895 2.29 0.00 38.24 2.32
4655 6217 1.092921 CCGCCAGCGCCTTACAAATA 61.093 55.000 2.29 0.00 38.24 1.40
4656 6218 0.944386 CGCCAGCGCCTTACAAATAT 59.056 50.000 2.29 0.00 0.00 1.28
4657 6219 1.334059 CGCCAGCGCCTTACAAATATG 60.334 52.381 2.29 0.00 0.00 1.78
4658 6220 1.600413 GCCAGCGCCTTACAAATATGC 60.600 52.381 2.29 0.00 0.00 3.14
4659 6221 1.001378 CCAGCGCCTTACAAATATGCC 60.001 52.381 2.29 0.00 0.00 4.40
4660 6222 1.001378 CAGCGCCTTACAAATATGCCC 60.001 52.381 2.29 0.00 0.00 5.36
4661 6223 0.040425 GCGCCTTACAAATATGCCCG 60.040 55.000 0.00 0.00 0.00 6.13
4662 6224 0.040425 CGCCTTACAAATATGCCCGC 60.040 55.000 0.00 0.00 0.00 6.13
4663 6225 0.313987 GCCTTACAAATATGCCCGCC 59.686 55.000 0.00 0.00 0.00 6.13
4664 6226 1.981256 CCTTACAAATATGCCCGCCT 58.019 50.000 0.00 0.00 0.00 5.52
4665 6227 2.306847 CCTTACAAATATGCCCGCCTT 58.693 47.619 0.00 0.00 0.00 4.35
4666 6228 3.482436 CCTTACAAATATGCCCGCCTTA 58.518 45.455 0.00 0.00 0.00 2.69
4667 6229 3.502211 CCTTACAAATATGCCCGCCTTAG 59.498 47.826 0.00 0.00 0.00 2.18
4668 6230 1.981256 ACAAATATGCCCGCCTTAGG 58.019 50.000 0.00 0.00 0.00 2.69
4759 6321 2.427753 CCCCCAGCGCCTTAGATC 59.572 66.667 2.29 0.00 0.00 2.75
4760 6322 2.029666 CCCCAGCGCCTTAGATCG 59.970 66.667 2.29 0.00 0.00 3.69
4766 6328 2.518711 GCGCCTTAGATCGCCTTAC 58.481 57.895 0.00 0.00 45.01 2.34
4767 6329 0.944788 GCGCCTTAGATCGCCTTACC 60.945 60.000 0.00 0.00 45.01 2.85
4768 6330 0.663568 CGCCTTAGATCGCCTTACCG 60.664 60.000 0.00 0.00 0.00 4.02
4769 6331 0.944788 GCCTTAGATCGCCTTACCGC 60.945 60.000 0.00 0.00 0.00 5.68
4770 6332 0.319641 CCTTAGATCGCCTTACCGCC 60.320 60.000 0.00 0.00 0.00 6.13
4771 6333 0.674534 CTTAGATCGCCTTACCGCCT 59.325 55.000 0.00 0.00 0.00 5.52
4772 6334 1.068741 CTTAGATCGCCTTACCGCCTT 59.931 52.381 0.00 0.00 0.00 4.35
4773 6335 1.985473 TAGATCGCCTTACCGCCTTA 58.015 50.000 0.00 0.00 0.00 2.69
4774 6336 1.117150 AGATCGCCTTACCGCCTTAA 58.883 50.000 0.00 0.00 0.00 1.85
4775 6337 1.483415 AGATCGCCTTACCGCCTTAAA 59.517 47.619 0.00 0.00 0.00 1.52
4776 6338 2.093341 AGATCGCCTTACCGCCTTAAAA 60.093 45.455 0.00 0.00 0.00 1.52
4777 6339 2.181954 TCGCCTTACCGCCTTAAAAA 57.818 45.000 0.00 0.00 0.00 1.94
4778 6340 1.805943 TCGCCTTACCGCCTTAAAAAC 59.194 47.619 0.00 0.00 0.00 2.43
4779 6341 1.536331 CGCCTTACCGCCTTAAAAACA 59.464 47.619 0.00 0.00 0.00 2.83
4780 6342 2.162809 CGCCTTACCGCCTTAAAAACAT 59.837 45.455 0.00 0.00 0.00 2.71
4781 6343 3.374678 CGCCTTACCGCCTTAAAAACATA 59.625 43.478 0.00 0.00 0.00 2.29
4782 6344 4.495184 CGCCTTACCGCCTTAAAAACATAG 60.495 45.833 0.00 0.00 0.00 2.23
5055 6834 2.261729 GGAGTTTCTCAACCTCCTCCT 58.738 52.381 0.00 0.00 32.70 3.69
5082 6861 1.537397 TTGGCTGCTCTCCTCAGGT 60.537 57.895 0.00 0.00 32.41 4.00
5101 6882 5.663106 TCAGGTTAATGAGCTTCTGGAGTAT 59.337 40.000 0.00 0.00 32.70 2.12
5171 6954 4.744795 AGGAGCGATGAACTGTTAGAAT 57.255 40.909 0.00 0.00 0.00 2.40
5285 7070 5.181009 TGGAGTTCTGCATTTATCAGAGTG 58.819 41.667 0.00 0.00 41.10 3.51
5347 7132 8.905702 CCTTTTTCGTCATTTTAGTTCTGAATG 58.094 33.333 0.00 0.00 33.24 2.67
5469 7254 2.622436 GTACACCATGACTTCAGGCTC 58.378 52.381 0.00 0.00 0.00 4.70
5474 7259 0.179089 CATGACTTCAGGCTCTCCCG 60.179 60.000 0.00 0.00 39.21 5.14
5480 7265 0.034896 TTCAGGCTCTCCCGTGAAAC 59.965 55.000 0.00 0.00 39.21 2.78
5490 7275 4.312443 TCTCCCGTGAAACATTACTTGAC 58.688 43.478 0.00 0.00 35.74 3.18
5516 7301 7.504922 TCGCAATAATTATTTCAACTGCAAC 57.495 32.000 8.01 0.00 0.00 4.17
5534 7319 0.877071 ACGGATTCAGTTGCAAGCAG 59.123 50.000 0.00 0.00 0.00 4.24
5536 7321 0.529378 GGATTCAGTTGCAAGCAGGG 59.471 55.000 0.00 0.00 0.00 4.45
5564 7349 9.923143 TTATATACGAACCTAAGTGAATCATGG 57.077 33.333 0.00 0.00 0.00 3.66
5569 7354 5.643777 CGAACCTAAGTGAATCATGGAAACT 59.356 40.000 0.00 0.00 0.00 2.66
5570 7355 6.816640 CGAACCTAAGTGAATCATGGAAACTA 59.183 38.462 0.00 0.00 0.00 2.24
5604 7389 8.915871 TCATCTTTGATTTTATTAGCTGCAAC 57.084 30.769 1.02 0.00 0.00 4.17
5605 7390 8.742777 TCATCTTTGATTTTATTAGCTGCAACT 58.257 29.630 1.02 0.00 0.00 3.16
5606 7391 8.804743 CATCTTTGATTTTATTAGCTGCAACTG 58.195 33.333 1.02 0.00 0.00 3.16
5607 7392 8.109705 TCTTTGATTTTATTAGCTGCAACTGA 57.890 30.769 1.02 0.00 0.00 3.41
5608 7393 8.023128 TCTTTGATTTTATTAGCTGCAACTGAC 58.977 33.333 1.02 0.00 0.00 3.51
5609 7394 6.194796 TGATTTTATTAGCTGCAACTGACC 57.805 37.500 1.02 0.00 0.00 4.02
5610 7395 5.945784 TGATTTTATTAGCTGCAACTGACCT 59.054 36.000 1.02 0.00 0.00 3.85
5611 7396 7.109501 TGATTTTATTAGCTGCAACTGACCTA 58.890 34.615 1.02 0.00 0.00 3.08
5612 7397 6.985188 TTTTATTAGCTGCAACTGACCTAG 57.015 37.500 1.02 0.00 0.00 3.02
5613 7398 5.677319 TTATTAGCTGCAACTGACCTAGT 57.323 39.130 1.02 0.00 42.89 2.57
5621 7406 3.217242 ACTGACCTAGTTTGCGCAG 57.783 52.632 11.31 0.00 35.67 5.18
5648 7433 8.827832 ATGATTTCCAAATTGTAAGATCTCCA 57.172 30.769 0.00 0.00 0.00 3.86
5649 7434 8.284945 TGATTTCCAAATTGTAAGATCTCCAG 57.715 34.615 0.00 0.00 0.00 3.86
5712 7500 7.988737 ACCAACAAAAAGGTAAACAGTACTAC 58.011 34.615 0.00 0.00 36.07 2.73
5717 7505 9.112725 ACAAAAAGGTAAACAGTACTACGATTT 57.887 29.630 0.00 0.00 0.00 2.17
5770 7558 3.130280 TGCAACTCTTCTCAAGATGCA 57.870 42.857 9.47 9.47 45.94 3.96
5771 7559 3.479489 TGCAACTCTTCTCAAGATGCAA 58.521 40.909 10.66 0.00 45.45 4.08
5772 7560 3.501062 TGCAACTCTTCTCAAGATGCAAG 59.499 43.478 10.66 0.00 45.45 4.01
5773 7561 3.670091 GCAACTCTTCTCAAGATGCAAGC 60.670 47.826 0.00 0.00 41.14 4.01
5774 7562 2.709213 ACTCTTCTCAAGATGCAAGCC 58.291 47.619 0.00 0.00 36.82 4.35
5775 7563 2.305343 ACTCTTCTCAAGATGCAAGCCT 59.695 45.455 0.00 0.00 36.82 4.58
5776 7564 3.244840 ACTCTTCTCAAGATGCAAGCCTT 60.245 43.478 0.00 0.00 36.82 4.35
5796 7584 9.660180 AAGCCTTCTTAACAAAAACAAAATGTA 57.340 25.926 0.00 0.00 0.00 2.29
5850 7638 6.422776 AAGCACGGTGAAACATTATAGAAG 57.577 37.500 13.29 0.00 39.98 2.85
5872 7660 9.315525 AGAAGACTGTTCAAAAACTAGAACTAC 57.684 33.333 0.00 0.00 43.38 2.73
5873 7661 9.315525 GAAGACTGTTCAAAAACTAGAACTACT 57.684 33.333 0.00 0.00 43.38 2.57
5887 7675 9.863650 AACTAGAACTACTATAGATGCTAACCA 57.136 33.333 6.78 0.00 0.00 3.67
5888 7676 9.863650 ACTAGAACTACTATAGATGCTAACCAA 57.136 33.333 6.78 0.00 0.00 3.67
5896 7684 8.451908 ACTATAGATGCTAACCAAAAATGACC 57.548 34.615 6.78 0.00 0.00 4.02
5897 7685 6.715347 ATAGATGCTAACCAAAAATGACCC 57.285 37.500 0.00 0.00 0.00 4.46
5898 7686 3.769300 AGATGCTAACCAAAAATGACCCC 59.231 43.478 0.00 0.00 0.00 4.95
5899 7687 2.252714 TGCTAACCAAAAATGACCCCC 58.747 47.619 0.00 0.00 0.00 5.40
5900 7688 1.203758 GCTAACCAAAAATGACCCCCG 59.796 52.381 0.00 0.00 0.00 5.73
5901 7689 2.521126 CTAACCAAAAATGACCCCCGT 58.479 47.619 0.00 0.00 0.00 5.28
5902 7690 1.044611 AACCAAAAATGACCCCCGTG 58.955 50.000 0.00 0.00 0.00 4.94
5903 7691 0.105913 ACCAAAAATGACCCCCGTGT 60.106 50.000 0.00 0.00 0.00 4.49
5904 7692 0.316841 CCAAAAATGACCCCCGTGTG 59.683 55.000 0.00 0.00 0.00 3.82
5905 7693 1.036707 CAAAAATGACCCCCGTGTGT 58.963 50.000 0.00 0.00 0.00 3.72
5906 7694 1.036707 AAAAATGACCCCCGTGTGTG 58.963 50.000 0.00 0.00 0.00 3.82
5907 7695 1.460273 AAAATGACCCCCGTGTGTGC 61.460 55.000 0.00 0.00 0.00 4.57
5908 7696 2.632602 AAATGACCCCCGTGTGTGCA 62.633 55.000 0.00 0.00 0.00 4.57
5909 7697 2.632602 AATGACCCCCGTGTGTGCAA 62.633 55.000 0.00 0.00 0.00 4.08
5910 7698 2.282180 GACCCCCGTGTGTGCAAT 60.282 61.111 0.00 0.00 0.00 3.56
5911 7699 1.901464 GACCCCCGTGTGTGCAATT 60.901 57.895 0.00 0.00 0.00 2.32
5912 7700 1.456705 ACCCCCGTGTGTGCAATTT 60.457 52.632 0.00 0.00 0.00 1.82
5913 7701 1.045911 ACCCCCGTGTGTGCAATTTT 61.046 50.000 0.00 0.00 0.00 1.82
5914 7702 0.105778 CCCCCGTGTGTGCAATTTTT 59.894 50.000 0.00 0.00 0.00 1.94
5915 7703 1.496934 CCCCGTGTGTGCAATTTTTC 58.503 50.000 0.00 0.00 0.00 2.29
5916 7704 1.202463 CCCCGTGTGTGCAATTTTTCA 60.202 47.619 0.00 0.00 0.00 2.69
5917 7705 2.544685 CCCGTGTGTGCAATTTTTCAA 58.455 42.857 0.00 0.00 0.00 2.69
5918 7706 3.129871 CCCGTGTGTGCAATTTTTCAAT 58.870 40.909 0.00 0.00 0.00 2.57
5919 7707 3.059733 CCCGTGTGTGCAATTTTTCAATG 60.060 43.478 0.00 0.00 0.00 2.82
5920 7708 3.801050 CCGTGTGTGCAATTTTTCAATGA 59.199 39.130 0.00 0.00 0.00 2.57
5921 7709 4.448395 CCGTGTGTGCAATTTTTCAATGAT 59.552 37.500 0.00 0.00 0.00 2.45
5922 7710 5.388682 CCGTGTGTGCAATTTTTCAATGATC 60.389 40.000 0.00 0.00 0.00 2.92
5923 7711 5.601582 GTGTGTGCAATTTTTCAATGATCG 58.398 37.500 0.00 0.00 0.00 3.69
5924 7712 5.175491 GTGTGTGCAATTTTTCAATGATCGT 59.825 36.000 0.00 0.00 0.00 3.73
5925 7713 5.175308 TGTGTGCAATTTTTCAATGATCGTG 59.825 36.000 0.00 0.00 0.00 4.35
5926 7714 5.175491 GTGTGCAATTTTTCAATGATCGTGT 59.825 36.000 0.00 0.00 0.00 4.49
5927 7715 5.401972 TGTGCAATTTTTCAATGATCGTGTC 59.598 36.000 0.00 0.00 0.00 3.67
5928 7716 4.922692 TGCAATTTTTCAATGATCGTGTCC 59.077 37.500 0.00 0.00 0.00 4.02
5929 7717 4.922692 GCAATTTTTCAATGATCGTGTCCA 59.077 37.500 0.00 0.00 0.00 4.02
5930 7718 5.404968 GCAATTTTTCAATGATCGTGTCCAA 59.595 36.000 0.00 0.00 0.00 3.53
5931 7719 6.616260 GCAATTTTTCAATGATCGTGTCCAAC 60.616 38.462 0.00 0.00 0.00 3.77
5932 7720 5.766150 TTTTTCAATGATCGTGTCCAACT 57.234 34.783 0.00 0.00 0.00 3.16
5933 7721 4.747540 TTTCAATGATCGTGTCCAACTG 57.252 40.909 0.00 0.00 0.00 3.16
5934 7722 3.676291 TCAATGATCGTGTCCAACTGA 57.324 42.857 0.00 0.00 0.00 3.41
5935 7723 4.001618 TCAATGATCGTGTCCAACTGAA 57.998 40.909 0.00 0.00 0.00 3.02
5936 7724 4.384940 TCAATGATCGTGTCCAACTGAAA 58.615 39.130 0.00 0.00 0.00 2.69
5937 7725 4.819088 TCAATGATCGTGTCCAACTGAAAA 59.181 37.500 0.00 0.00 0.00 2.29
5938 7726 4.749245 ATGATCGTGTCCAACTGAAAAC 57.251 40.909 0.00 0.00 0.00 2.43
5939 7727 3.536570 TGATCGTGTCCAACTGAAAACA 58.463 40.909 0.00 0.00 0.00 2.83
5940 7728 3.942115 TGATCGTGTCCAACTGAAAACAA 59.058 39.130 0.00 0.00 0.00 2.83
5941 7729 3.750639 TCGTGTCCAACTGAAAACAAC 57.249 42.857 0.00 0.00 0.00 3.32
5942 7730 3.340034 TCGTGTCCAACTGAAAACAACT 58.660 40.909 0.00 0.00 0.00 3.16
5943 7731 4.505808 TCGTGTCCAACTGAAAACAACTA 58.494 39.130 0.00 0.00 0.00 2.24
5944 7732 5.120399 TCGTGTCCAACTGAAAACAACTAT 58.880 37.500 0.00 0.00 0.00 2.12
5945 7733 5.007234 TCGTGTCCAACTGAAAACAACTATG 59.993 40.000 0.00 0.00 0.00 2.23
5946 7734 5.220777 CGTGTCCAACTGAAAACAACTATGT 60.221 40.000 0.00 0.00 43.14 2.29
5947 7735 5.971202 GTGTCCAACTGAAAACAACTATGTG 59.029 40.000 0.00 0.00 40.46 3.21
5948 7736 5.650266 TGTCCAACTGAAAACAACTATGTGT 59.350 36.000 0.00 0.00 40.46 3.72
5949 7737 5.971202 GTCCAACTGAAAACAACTATGTGTG 59.029 40.000 0.00 0.00 40.46 3.82
5950 7738 4.739716 CCAACTGAAAACAACTATGTGTGC 59.260 41.667 0.00 0.00 40.46 4.57
5951 7739 5.339177 CAACTGAAAACAACTATGTGTGCA 58.661 37.500 0.00 0.00 40.46 4.57
5952 7740 5.574891 ACTGAAAACAACTATGTGTGCAA 57.425 34.783 0.00 0.00 40.46 4.08
5953 7741 6.147864 ACTGAAAACAACTATGTGTGCAAT 57.852 33.333 0.00 0.00 40.46 3.56
5954 7742 6.572519 ACTGAAAACAACTATGTGTGCAATT 58.427 32.000 0.00 0.00 40.46 2.32
5955 7743 6.476380 ACTGAAAACAACTATGTGTGCAATTG 59.524 34.615 0.00 0.00 40.46 2.32
5956 7744 6.567959 TGAAAACAACTATGTGTGCAATTGA 58.432 32.000 10.34 0.00 40.46 2.57
5957 7745 7.038048 TGAAAACAACTATGTGTGCAATTGAA 58.962 30.769 10.34 0.00 40.46 2.69
5958 7746 7.547019 TGAAAACAACTATGTGTGCAATTGAAA 59.453 29.630 10.34 0.00 40.46 2.69
5959 7747 6.826893 AACAACTATGTGTGCAATTGAAAC 57.173 33.333 10.34 7.19 40.46 2.78
5960 7748 6.147864 ACAACTATGTGTGCAATTGAAACT 57.852 33.333 10.34 0.00 38.69 2.66
5961 7749 7.270757 ACAACTATGTGTGCAATTGAAACTA 57.729 32.000 10.34 1.32 38.69 2.24
5962 7750 7.138736 ACAACTATGTGTGCAATTGAAACTAC 58.861 34.615 10.34 8.09 38.69 2.73
5963 7751 7.013274 ACAACTATGTGTGCAATTGAAACTACT 59.987 33.333 10.34 0.00 38.69 2.57
5964 7752 8.503196 CAACTATGTGTGCAATTGAAACTACTA 58.497 33.333 10.34 0.10 0.00 1.82
5965 7753 8.792830 ACTATGTGTGCAATTGAAACTACTAT 57.207 30.769 10.34 3.58 0.00 2.12
5966 7754 9.884636 ACTATGTGTGCAATTGAAACTACTATA 57.115 29.630 10.34 4.39 0.00 1.31
5969 7757 9.618890 ATGTGTGCAATTGAAACTACTATAGAT 57.381 29.630 10.34 0.00 0.00 1.98
5970 7758 8.882736 TGTGTGCAATTGAAACTACTATAGATG 58.117 33.333 10.34 1.07 0.00 2.90
5971 7759 7.852945 GTGTGCAATTGAAACTACTATAGATGC 59.147 37.037 10.34 0.00 0.00 3.91
5972 7760 7.012327 TGTGCAATTGAAACTACTATAGATGCC 59.988 37.037 10.34 0.00 0.00 4.40
5973 7761 7.012327 GTGCAATTGAAACTACTATAGATGCCA 59.988 37.037 10.34 0.00 0.00 4.92
5974 7762 7.555914 TGCAATTGAAACTACTATAGATGCCAA 59.444 33.333 10.34 3.60 0.00 4.52
5975 7763 7.857885 GCAATTGAAACTACTATAGATGCCAAC 59.142 37.037 10.34 0.00 0.00 3.77
5976 7764 8.892723 CAATTGAAACTACTATAGATGCCAACA 58.107 33.333 6.78 0.00 0.00 3.33
5977 7765 9.461312 AATTGAAACTACTATAGATGCCAACAA 57.539 29.630 6.78 5.31 0.00 2.83
5978 7766 8.856153 TTGAAACTACTATAGATGCCAACAAA 57.144 30.769 6.78 0.00 0.00 2.83
5979 7767 8.856153 TGAAACTACTATAGATGCCAACAAAA 57.144 30.769 6.78 0.00 0.00 2.44
5980 7768 9.290988 TGAAACTACTATAGATGCCAACAAAAA 57.709 29.630 6.78 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
404 406 1.341679 GGACCCTGGTAAAATCCCACC 60.342 57.143 0.00 0.00 35.24 4.61
581 583 2.263540 GTGCCTCCCGCGAAGTAA 59.736 61.111 8.23 0.00 42.08 2.24
585 587 4.373116 GACTGTGCCTCCCGCGAA 62.373 66.667 8.23 0.00 42.08 4.70
597 599 1.006102 CCGAAAGAGGCACGACTGT 60.006 57.895 0.00 0.00 0.00 3.55
598 600 0.108615 ATCCGAAAGAGGCACGACTG 60.109 55.000 0.00 0.00 0.00 3.51
599 601 1.405821 CTATCCGAAAGAGGCACGACT 59.594 52.381 0.00 0.00 0.00 4.18
600 602 1.536284 CCTATCCGAAAGAGGCACGAC 60.536 57.143 0.00 0.00 0.00 4.34
601 603 0.744874 CCTATCCGAAAGAGGCACGA 59.255 55.000 0.00 0.00 0.00 4.35
602 604 0.744874 TCCTATCCGAAAGAGGCACG 59.255 55.000 0.00 0.00 0.00 5.34
603 605 2.981859 TTCCTATCCGAAAGAGGCAC 57.018 50.000 0.00 0.00 0.00 5.01
604 606 3.992943 TTTTCCTATCCGAAAGAGGCA 57.007 42.857 0.00 0.00 33.46 4.75
624 626 7.936584 TGTTGATAGGTTTTGACGATCTTTTT 58.063 30.769 0.00 0.00 0.00 1.94
625 627 7.504924 TGTTGATAGGTTTTGACGATCTTTT 57.495 32.000 0.00 0.00 0.00 2.27
626 628 7.687941 ATGTTGATAGGTTTTGACGATCTTT 57.312 32.000 0.00 0.00 0.00 2.52
627 629 8.786826 TTATGTTGATAGGTTTTGACGATCTT 57.213 30.769 0.00 0.00 0.00 2.40
628 630 8.786826 TTTATGTTGATAGGTTTTGACGATCT 57.213 30.769 0.00 0.00 0.00 2.75
631 633 9.226606 AGATTTTATGTTGATAGGTTTTGACGA 57.773 29.630 0.00 0.00 0.00 4.20
650 652 9.017669 GCGTCGAGATCTTTAAACTAGATTTTA 57.982 33.333 0.00 0.00 32.64 1.52
651 653 7.253684 CGCGTCGAGATCTTTAAACTAGATTTT 60.254 37.037 0.00 0.00 32.64 1.82
652 654 6.196724 CGCGTCGAGATCTTTAAACTAGATTT 59.803 38.462 0.00 0.00 32.64 2.17
653 655 5.681982 CGCGTCGAGATCTTTAAACTAGATT 59.318 40.000 0.00 0.00 32.64 2.40
654 656 5.007430 TCGCGTCGAGATCTTTAAACTAGAT 59.993 40.000 5.77 0.00 35.12 1.98
655 657 4.330894 TCGCGTCGAGATCTTTAAACTAGA 59.669 41.667 5.77 0.00 0.00 2.43
656 658 4.585364 TCGCGTCGAGATCTTTAAACTAG 58.415 43.478 5.77 0.00 0.00 2.57
657 659 4.604843 TCGCGTCGAGATCTTTAAACTA 57.395 40.909 5.77 0.00 0.00 2.24
658 660 3.482722 TCGCGTCGAGATCTTTAAACT 57.517 42.857 5.77 0.00 0.00 2.66
659 661 3.850273 TCTTCGCGTCGAGATCTTTAAAC 59.150 43.478 5.77 0.00 37.14 2.01
660 662 4.087510 TCTTCGCGTCGAGATCTTTAAA 57.912 40.909 5.77 0.00 37.14 1.52
661 663 3.752412 TCTTCGCGTCGAGATCTTTAA 57.248 42.857 5.77 0.00 37.14 1.52
662 664 3.752412 TTCTTCGCGTCGAGATCTTTA 57.248 42.857 5.77 0.00 37.14 1.85
663 665 2.631418 TTCTTCGCGTCGAGATCTTT 57.369 45.000 5.77 0.00 37.14 2.52
664 666 2.541999 GGATTCTTCGCGTCGAGATCTT 60.542 50.000 5.77 0.00 37.14 2.40
665 667 1.002251 GGATTCTTCGCGTCGAGATCT 60.002 52.381 5.77 0.00 37.14 2.75
666 668 1.268589 TGGATTCTTCGCGTCGAGATC 60.269 52.381 5.77 4.95 37.14 2.75
667 669 0.738975 TGGATTCTTCGCGTCGAGAT 59.261 50.000 5.77 0.00 37.14 2.75
668 670 0.524414 TTGGATTCTTCGCGTCGAGA 59.476 50.000 5.77 5.73 37.14 4.04
669 671 0.640768 GTTGGATTCTTCGCGTCGAG 59.359 55.000 5.77 3.11 37.14 4.04
670 672 0.038983 TGTTGGATTCTTCGCGTCGA 60.039 50.000 5.77 0.21 0.00 4.20
671 673 0.787787 TTGTTGGATTCTTCGCGTCG 59.212 50.000 5.77 0.00 0.00 5.12
672 674 2.415168 TCATTGTTGGATTCTTCGCGTC 59.585 45.455 5.77 0.00 0.00 5.19
673 675 2.422597 TCATTGTTGGATTCTTCGCGT 58.577 42.857 5.77 0.00 0.00 6.01
674 676 3.469899 TTCATTGTTGGATTCTTCGCG 57.530 42.857 0.00 0.00 0.00 5.87
675 677 4.088496 CGTTTTCATTGTTGGATTCTTCGC 59.912 41.667 0.00 0.00 0.00 4.70
676 678 4.616802 CCGTTTTCATTGTTGGATTCTTCG 59.383 41.667 0.00 0.00 0.00 3.79
677 679 5.528870 ACCGTTTTCATTGTTGGATTCTTC 58.471 37.500 0.00 0.00 0.00 2.87
678 680 5.529581 ACCGTTTTCATTGTTGGATTCTT 57.470 34.783 0.00 0.00 0.00 2.52
679 681 5.528870 GAACCGTTTTCATTGTTGGATTCT 58.471 37.500 0.00 0.00 0.00 2.40
680 682 4.381566 CGAACCGTTTTCATTGTTGGATTC 59.618 41.667 0.00 0.00 0.00 2.52
681 683 4.036971 TCGAACCGTTTTCATTGTTGGATT 59.963 37.500 0.00 0.00 0.00 3.01
682 684 3.566322 TCGAACCGTTTTCATTGTTGGAT 59.434 39.130 0.00 0.00 0.00 3.41
683 685 2.943690 TCGAACCGTTTTCATTGTTGGA 59.056 40.909 0.00 0.00 0.00 3.53
684 686 3.002862 TCTCGAACCGTTTTCATTGTTGG 59.997 43.478 0.00 0.00 0.00 3.77
685 687 4.203950 TCTCGAACCGTTTTCATTGTTG 57.796 40.909 0.00 0.00 0.00 3.33
686 688 5.432885 AATCTCGAACCGTTTTCATTGTT 57.567 34.783 0.00 0.00 0.00 2.83
687 689 5.432885 AAATCTCGAACCGTTTTCATTGT 57.567 34.783 0.00 0.00 0.00 2.71
688 690 8.172484 TGTATAAATCTCGAACCGTTTTCATTG 58.828 33.333 0.00 0.00 0.00 2.82
689 691 8.173130 GTGTATAAATCTCGAACCGTTTTCATT 58.827 33.333 0.00 0.00 0.00 2.57
690 692 7.332430 TGTGTATAAATCTCGAACCGTTTTCAT 59.668 33.333 0.00 0.00 0.00 2.57
691 693 6.645827 TGTGTATAAATCTCGAACCGTTTTCA 59.354 34.615 0.00 0.00 0.00 2.69
692 694 6.952083 GTGTGTATAAATCTCGAACCGTTTTC 59.048 38.462 0.00 0.00 0.00 2.29
693 695 6.400303 CGTGTGTATAAATCTCGAACCGTTTT 60.400 38.462 0.00 0.00 0.00 2.43
694 696 5.061311 CGTGTGTATAAATCTCGAACCGTTT 59.939 40.000 0.00 0.00 0.00 3.60
695 697 4.560035 CGTGTGTATAAATCTCGAACCGTT 59.440 41.667 0.00 0.00 0.00 4.44
696 698 4.100529 CGTGTGTATAAATCTCGAACCGT 58.899 43.478 0.00 0.00 0.00 4.83
697 699 3.061403 GCGTGTGTATAAATCTCGAACCG 60.061 47.826 0.00 0.00 0.00 4.44
698 700 3.061403 CGCGTGTGTATAAATCTCGAACC 60.061 47.826 0.00 0.00 0.00 3.62
699 701 3.787634 TCGCGTGTGTATAAATCTCGAAC 59.212 43.478 5.77 0.00 0.00 3.95
700 702 4.018649 TCGCGTGTGTATAAATCTCGAA 57.981 40.909 5.77 0.00 0.00 3.71
701 703 3.678915 TCGCGTGTGTATAAATCTCGA 57.321 42.857 5.77 0.00 0.00 4.04
702 704 3.179795 CCTTCGCGTGTGTATAAATCTCG 59.820 47.826 5.77 0.00 0.00 4.04
703 705 4.026804 CACCTTCGCGTGTGTATAAATCTC 60.027 45.833 5.77 0.00 0.00 2.75
704 706 3.863424 CACCTTCGCGTGTGTATAAATCT 59.137 43.478 5.77 0.00 0.00 2.40
705 707 3.000925 CCACCTTCGCGTGTGTATAAATC 59.999 47.826 19.17 0.00 31.47 2.17
706 708 2.933906 CCACCTTCGCGTGTGTATAAAT 59.066 45.455 19.17 0.00 31.47 1.40
707 709 2.339418 CCACCTTCGCGTGTGTATAAA 58.661 47.619 19.17 0.00 31.47 1.40
708 710 1.404449 CCCACCTTCGCGTGTGTATAA 60.404 52.381 19.17 0.63 31.47 0.98
709 711 0.173935 CCCACCTTCGCGTGTGTATA 59.826 55.000 19.17 0.00 31.47 1.47
710 712 1.079405 CCCACCTTCGCGTGTGTAT 60.079 57.895 19.17 0.00 31.47 2.29
711 713 2.149803 CTCCCACCTTCGCGTGTGTA 62.150 60.000 19.17 10.05 31.47 2.90
712 714 3.515316 CTCCCACCTTCGCGTGTGT 62.515 63.158 19.17 8.01 31.47 3.72
713 715 2.738521 CTCCCACCTTCGCGTGTG 60.739 66.667 5.77 12.29 31.47 3.82
714 716 3.231736 ACTCCCACCTTCGCGTGT 61.232 61.111 5.77 0.00 31.47 4.49
715 717 2.738521 CACTCCCACCTTCGCGTG 60.739 66.667 5.77 0.00 0.00 5.34
716 718 2.915659 TCACTCCCACCTTCGCGT 60.916 61.111 5.77 0.00 0.00 6.01
717 719 2.432628 GTCACTCCCACCTTCGCG 60.433 66.667 0.00 0.00 0.00 5.87
718 720 1.255667 TAGGTCACTCCCACCTTCGC 61.256 60.000 0.00 0.00 41.95 4.70
719 721 1.137086 CATAGGTCACTCCCACCTTCG 59.863 57.143 0.00 0.00 41.95 3.79
720 722 1.134371 GCATAGGTCACTCCCACCTTC 60.134 57.143 0.00 0.00 41.95 3.46
721 723 0.912486 GCATAGGTCACTCCCACCTT 59.088 55.000 0.00 0.00 41.95 3.50
722 724 0.252696 TGCATAGGTCACTCCCACCT 60.253 55.000 0.00 0.00 46.60 4.00
723 725 0.839946 ATGCATAGGTCACTCCCACC 59.160 55.000 0.00 0.00 36.75 4.61
724 726 2.717639 AATGCATAGGTCACTCCCAC 57.282 50.000 0.00 0.00 36.75 4.61
725 727 5.387113 AATAAATGCATAGGTCACTCCCA 57.613 39.130 0.00 0.00 36.75 4.37
726 728 8.409358 AATAAATAAATGCATAGGTCACTCCC 57.591 34.615 0.00 0.00 36.75 4.30
748 750 9.396022 CCAGGAGCACTCTTCTAAAAATAAATA 57.604 33.333 0.00 0.00 0.00 1.40
749 751 7.890655 ACCAGGAGCACTCTTCTAAAAATAAAT 59.109 33.333 0.00 0.00 0.00 1.40
750 752 7.231467 ACCAGGAGCACTCTTCTAAAAATAAA 58.769 34.615 0.00 0.00 0.00 1.40
751 753 6.779860 ACCAGGAGCACTCTTCTAAAAATAA 58.220 36.000 0.00 0.00 0.00 1.40
752 754 6.013725 TGACCAGGAGCACTCTTCTAAAAATA 60.014 38.462 0.00 0.00 0.00 1.40
753 755 5.221925 TGACCAGGAGCACTCTTCTAAAAAT 60.222 40.000 0.00 0.00 0.00 1.82
754 756 4.102524 TGACCAGGAGCACTCTTCTAAAAA 59.897 41.667 0.00 0.00 0.00 1.94
755 757 3.646162 TGACCAGGAGCACTCTTCTAAAA 59.354 43.478 0.00 0.00 0.00 1.52
756 758 3.006967 GTGACCAGGAGCACTCTTCTAAA 59.993 47.826 0.00 0.00 32.44 1.85
757 759 2.563179 GTGACCAGGAGCACTCTTCTAA 59.437 50.000 0.00 0.00 32.44 2.10
758 760 2.171840 GTGACCAGGAGCACTCTTCTA 58.828 52.381 0.00 0.00 32.44 2.10
759 761 0.972883 GTGACCAGGAGCACTCTTCT 59.027 55.000 0.00 0.00 32.44 2.85
760 762 0.972883 AGTGACCAGGAGCACTCTTC 59.027 55.000 12.25 0.00 41.21 2.87
761 763 0.683973 CAGTGACCAGGAGCACTCTT 59.316 55.000 14.38 0.00 43.06 2.85
762 764 1.825281 GCAGTGACCAGGAGCACTCT 61.825 60.000 14.38 0.00 43.06 3.24
763 765 1.375268 GCAGTGACCAGGAGCACTC 60.375 63.158 14.38 8.11 43.06 3.51
764 766 2.746359 GCAGTGACCAGGAGCACT 59.254 61.111 12.25 12.25 45.62 4.40
765 767 2.740055 CGCAGTGACCAGGAGCAC 60.740 66.667 8.60 8.60 35.30 4.40
766 768 4.687215 GCGCAGTGACCAGGAGCA 62.687 66.667 0.30 0.00 0.00 4.26
768 770 4.767255 GGGCGCAGTGACCAGGAG 62.767 72.222 10.83 0.00 0.00 3.69
781 783 3.958147 CTGTACAGGCTGGTGGGCG 62.958 68.421 20.34 0.00 45.89 6.13
782 784 2.045926 CTGTACAGGCTGGTGGGC 60.046 66.667 20.34 4.42 41.20 5.36
783 785 1.003355 CACTGTACAGGCTGGTGGG 60.003 63.158 26.12 8.68 0.00 4.61
784 786 1.003355 CCACTGTACAGGCTGGTGG 60.003 63.158 26.12 21.10 40.84 4.61
932 934 1.447643 GATCTGGTGGATCGGGTGG 59.552 63.158 0.00 0.00 40.99 4.61
1237 1248 2.474526 CGCGCGACATCAATTTTCTCTT 60.475 45.455 28.94 0.00 0.00 2.85
1248 1260 3.295228 AACAAGCACGCGCGACATC 62.295 57.895 39.36 20.64 45.49 3.06
1276 1288 3.356290 TCTTGGCAAGGGAAATTCTAGC 58.644 45.455 25.92 0.00 0.00 3.42
1365 1377 4.067896 ACCAACACAAGCTCTGAATACAG 58.932 43.478 0.00 0.00 44.66 2.74
1366 1378 4.085357 ACCAACACAAGCTCTGAATACA 57.915 40.909 0.00 0.00 0.00 2.29
1367 1379 4.757149 AGAACCAACACAAGCTCTGAATAC 59.243 41.667 0.00 0.00 0.00 1.89
1386 1398 6.645415 TGAACCGAATCACTTAGAGAAAGAAC 59.355 38.462 0.00 0.00 38.67 3.01
1436 1448 4.442706 AGGTTGCGTCGATTTTGATCTAT 58.557 39.130 0.00 0.00 0.00 1.98
1442 1454 4.041723 AGAAAAAGGTTGCGTCGATTTTG 58.958 39.130 0.00 0.00 0.00 2.44
1669 2205 2.025418 CGTATCCGGGTATTGGCGC 61.025 63.158 0.00 0.00 0.00 6.53
1700 2236 9.941325 AAATGGTTTGATGCTTAATTGATAACA 57.059 25.926 0.00 0.00 0.00 2.41
1795 2331 2.048603 GGCTACCCTTTGGCTGCTG 61.049 63.158 0.00 0.00 34.67 4.41
1833 2369 5.189934 TCCTCCCTTTCTCTCTAATTGAACC 59.810 44.000 0.00 0.00 0.00 3.62
1962 2498 6.097696 TCCGATACTGATTCTTTCACCATACA 59.902 38.462 0.00 0.00 0.00 2.29
1999 2546 6.534079 ACTTCAAGCAACTAATGTATCCGTAC 59.466 38.462 0.00 0.00 0.00 3.67
2009 2556 5.488341 ACACCGATACTTCAAGCAACTAAT 58.512 37.500 0.00 0.00 0.00 1.73
2012 2559 3.402628 ACACCGATACTTCAAGCAACT 57.597 42.857 0.00 0.00 0.00 3.16
2157 2704 4.753610 ACATGATTTACTCGCATCCATGAG 59.246 41.667 0.00 0.00 38.21 2.90
2223 2770 2.005451 CGGATTCAGCAGAAGTTCAGG 58.995 52.381 5.50 0.00 37.14 3.86
2271 2818 7.362662 TCACAAGATTTTCTTAGCAACATCAC 58.637 34.615 0.00 0.00 33.78 3.06
2321 2868 6.152661 AGGAGAACGCATGGATAAAAATCAAA 59.847 34.615 0.00 0.00 0.00 2.69
2322 2869 5.652014 AGGAGAACGCATGGATAAAAATCAA 59.348 36.000 0.00 0.00 0.00 2.57
2382 2931 4.644103 AATCACCACAATATTCTGCAGC 57.356 40.909 9.47 0.00 0.00 5.25
2392 2941 4.464951 TCACTACCGTCTAATCACCACAAT 59.535 41.667 0.00 0.00 0.00 2.71
2427 2976 8.911247 AACGAAATATTACAAAGAGGCATTTC 57.089 30.769 0.00 0.00 0.00 2.17
2451 3000 6.186957 AGGAATGAACAATACTGGTGCATAA 58.813 36.000 0.00 0.00 0.00 1.90
2492 3041 7.652727 AGAAATTTTAGCTCCAAACTGAGAAC 58.347 34.615 0.00 0.00 34.11 3.01
2628 3179 9.085645 ACAATGTATTCATGATTTCCAGCATAT 57.914 29.630 0.00 0.00 34.19 1.78
2745 3296 6.499106 AAAGGGAACATTGGAAATTTCACT 57.501 33.333 19.49 0.90 32.97 3.41
2746 3297 9.936759 TTATAAAGGGAACATTGGAAATTTCAC 57.063 29.630 19.49 9.62 0.00 3.18
2873 4270 8.744652 TGAGAAAGTGTGATTTTTCCAGTTTAA 58.255 29.630 0.00 0.00 33.20 1.52
2928 4325 5.998454 AATCAGAAATTCTAGCATGTCGG 57.002 39.130 0.00 0.00 0.00 4.79
3409 4967 5.048504 TGAATCACCATTCTGAAGAAACTGC 60.049 40.000 0.00 0.00 39.49 4.40
3635 5193 0.737219 CATCTGCCTGCTTAACCTGC 59.263 55.000 0.00 0.00 0.00 4.85
3839 5397 3.992311 TCCCCTAGTATCAAGTAGCCCTA 59.008 47.826 0.00 0.00 0.00 3.53
3843 5401 6.267014 TGTGTAATCCCCTAGTATCAAGTAGC 59.733 42.308 0.00 0.00 0.00 3.58
3875 5433 9.962783 GCGGATAGAGTAATTAGTTAGAAAAGA 57.037 33.333 0.00 0.00 0.00 2.52
3885 5443 7.653647 ACTTTCAGAGCGGATAGAGTAATTAG 58.346 38.462 0.00 0.00 0.00 1.73
4099 5657 4.693566 TGGCTAATAAACGTTGTGAGAAGG 59.306 41.667 0.00 0.00 0.00 3.46
4103 5661 5.323900 CACATGGCTAATAAACGTTGTGAG 58.676 41.667 0.00 0.00 0.00 3.51
4131 5689 3.738791 CCCGCAAGTACCAAAACAAATTC 59.261 43.478 0.00 0.00 0.00 2.17
4151 5709 5.897377 AAATGCTGTACACTAACATTCCC 57.103 39.130 0.00 0.00 30.90 3.97
4172 5730 4.666412 TCCAATGGTGTCCTTGGATAAA 57.334 40.909 0.00 0.00 44.56 1.40
4405 5965 6.824305 AACTGCTGAGTGCTTATTTTACAT 57.176 33.333 0.00 0.00 43.37 2.29
4406 5966 6.039270 ACAAACTGCTGAGTGCTTATTTTACA 59.961 34.615 0.00 0.00 43.37 2.41
4568 6130 4.386954 GCCTTAAAAACAGAGCTGCATTTC 59.613 41.667 1.02 0.00 0.00 2.17
4569 6131 4.309933 GCCTTAAAAACAGAGCTGCATTT 58.690 39.130 1.02 2.46 0.00 2.32
4570 6132 3.612479 CGCCTTAAAAACAGAGCTGCATT 60.612 43.478 1.02 0.00 0.00 3.56
4571 6133 2.095059 CGCCTTAAAAACAGAGCTGCAT 60.095 45.455 1.02 0.00 0.00 3.96
4572 6134 1.266718 CGCCTTAAAAACAGAGCTGCA 59.733 47.619 1.02 0.00 0.00 4.41
4573 6135 1.266989 ACGCCTTAAAAACAGAGCTGC 59.733 47.619 0.00 0.00 0.00 5.25
4574 6136 2.095718 GGACGCCTTAAAAACAGAGCTG 60.096 50.000 0.00 0.00 0.00 4.24
4575 6137 2.152016 GGACGCCTTAAAAACAGAGCT 58.848 47.619 0.00 0.00 0.00 4.09
4576 6138 1.199327 GGGACGCCTTAAAAACAGAGC 59.801 52.381 0.00 0.00 0.00 4.09
4593 6155 2.998480 TAAGCGTCCAAGGCGGGA 60.998 61.111 0.00 0.00 33.62 5.14
4594 6156 2.511600 CTAAGCGTCCAAGGCGGG 60.512 66.667 5.39 0.00 33.62 6.13
4595 6157 2.511600 CCTAAGCGTCCAAGGCGG 60.512 66.667 5.39 0.00 33.62 6.13
4596 6158 3.195698 GCCTAAGCGTCCAAGGCG 61.196 66.667 0.00 0.00 45.82 5.52
4606 6168 2.238437 GCCTAAGCGTCGCCTAAGC 61.238 63.158 14.86 7.18 0.00 3.09
4607 6169 4.014065 GCCTAAGCGTCGCCTAAG 57.986 61.111 14.86 8.78 0.00 2.18
4636 6198 1.092921 TATTTGTAAGGCGCTGGCGG 61.093 55.000 16.61 0.00 41.24 6.13
4637 6199 0.944386 ATATTTGTAAGGCGCTGGCG 59.056 50.000 7.64 10.80 41.24 5.69
4638 6200 1.600413 GCATATTTGTAAGGCGCTGGC 60.600 52.381 7.64 0.00 38.90 4.85
4639 6201 1.001378 GGCATATTTGTAAGGCGCTGG 60.001 52.381 7.64 0.00 0.00 4.85
4640 6202 1.001378 GGGCATATTTGTAAGGCGCTG 60.001 52.381 7.64 0.00 34.95 5.18
4641 6203 1.318576 GGGCATATTTGTAAGGCGCT 58.681 50.000 7.64 0.00 34.95 5.92
4642 6204 0.040425 CGGGCATATTTGTAAGGCGC 60.040 55.000 0.00 0.00 0.00 6.53
4643 6205 0.040425 GCGGGCATATTTGTAAGGCG 60.040 55.000 0.00 0.00 0.00 5.52
4644 6206 0.313987 GGCGGGCATATTTGTAAGGC 59.686 55.000 0.00 0.00 0.00 4.35
4645 6207 1.981256 AGGCGGGCATATTTGTAAGG 58.019 50.000 3.78 0.00 0.00 2.69
4646 6208 3.502211 CCTAAGGCGGGCATATTTGTAAG 59.498 47.826 3.78 0.00 0.00 2.34
4647 6209 3.482436 CCTAAGGCGGGCATATTTGTAA 58.518 45.455 3.78 0.00 0.00 2.41
4648 6210 3.134574 CCTAAGGCGGGCATATTTGTA 57.865 47.619 3.78 0.00 0.00 2.41
4649 6211 1.981256 CCTAAGGCGGGCATATTTGT 58.019 50.000 3.78 0.00 0.00 2.83
4742 6304 2.427753 GATCTAAGGCGCTGGGGG 59.572 66.667 7.64 0.00 0.00 5.40
4743 6305 2.029666 CGATCTAAGGCGCTGGGG 59.970 66.667 7.64 0.00 0.00 4.96
4749 6311 0.663568 CGGTAAGGCGATCTAAGGCG 60.664 60.000 0.00 0.00 39.33 5.52
4750 6312 0.944788 GCGGTAAGGCGATCTAAGGC 60.945 60.000 0.00 0.00 0.00 4.35
4751 6313 0.319641 GGCGGTAAGGCGATCTAAGG 60.320 60.000 0.00 0.00 35.04 2.69
4752 6314 3.196613 GGCGGTAAGGCGATCTAAG 57.803 57.895 0.00 0.00 35.04 2.18
4761 6323 6.746745 TTCTATGTTTTTAAGGCGGTAAGG 57.253 37.500 0.00 0.00 0.00 2.69
4762 6324 7.220108 GCATTTCTATGTTTTTAAGGCGGTAAG 59.780 37.037 0.00 0.00 34.12 2.34
4763 6325 7.030768 GCATTTCTATGTTTTTAAGGCGGTAA 58.969 34.615 0.00 0.00 34.12 2.85
4764 6326 6.151312 TGCATTTCTATGTTTTTAAGGCGGTA 59.849 34.615 0.00 0.00 34.12 4.02
4765 6327 5.047660 TGCATTTCTATGTTTTTAAGGCGGT 60.048 36.000 0.00 0.00 34.12 5.68
4766 6328 5.406649 TGCATTTCTATGTTTTTAAGGCGG 58.593 37.500 0.00 0.00 34.12 6.13
4767 6329 6.321717 TCTGCATTTCTATGTTTTTAAGGCG 58.678 36.000 0.00 0.00 34.12 5.52
4768 6330 8.028938 TCTTCTGCATTTCTATGTTTTTAAGGC 58.971 33.333 0.00 0.00 34.12 4.35
4769 6331 9.346725 GTCTTCTGCATTTCTATGTTTTTAAGG 57.653 33.333 0.00 0.00 34.12 2.69
4772 6334 9.283768 TGAGTCTTCTGCATTTCTATGTTTTTA 57.716 29.630 0.00 0.00 34.12 1.52
4773 6335 8.078596 GTGAGTCTTCTGCATTTCTATGTTTTT 58.921 33.333 0.00 0.00 34.12 1.94
4774 6336 7.571983 CGTGAGTCTTCTGCATTTCTATGTTTT 60.572 37.037 0.00 0.00 34.12 2.43
4775 6337 6.128445 CGTGAGTCTTCTGCATTTCTATGTTT 60.128 38.462 0.00 0.00 34.12 2.83
4776 6338 5.349817 CGTGAGTCTTCTGCATTTCTATGTT 59.650 40.000 0.00 0.00 34.12 2.71
4777 6339 4.867047 CGTGAGTCTTCTGCATTTCTATGT 59.133 41.667 0.00 0.00 34.12 2.29
4778 6340 5.105063 TCGTGAGTCTTCTGCATTTCTATG 58.895 41.667 0.00 0.00 34.76 2.23
4779 6341 5.330455 TCGTGAGTCTTCTGCATTTCTAT 57.670 39.130 0.00 0.00 0.00 1.98
4780 6342 4.783764 TCGTGAGTCTTCTGCATTTCTA 57.216 40.909 0.00 0.00 0.00 2.10
4781 6343 3.667497 TCGTGAGTCTTCTGCATTTCT 57.333 42.857 0.00 0.00 0.00 2.52
4782 6344 3.928992 TGATCGTGAGTCTTCTGCATTTC 59.071 43.478 0.00 0.00 0.00 2.17
4850 6626 0.322277 AGCATGTCCAAGACTGGCAG 60.322 55.000 14.16 14.16 43.17 4.85
5055 6834 1.228245 GAGCAGCCAACACCTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
5082 6861 6.115446 CACCAATACTCCAGAAGCTCATTAA 58.885 40.000 0.00 0.00 0.00 1.40
5101 6882 3.632080 ATCGACCGGGTGCACCAA 61.632 61.111 35.78 14.49 40.22 3.67
5171 6954 2.445682 AGTTAAACCTGGCACCACAA 57.554 45.000 0.00 0.00 0.00 3.33
5276 7061 5.215252 GGCATTAAGGCTACACTCTGATA 57.785 43.478 12.41 0.00 40.24 2.15
5469 7254 4.062293 TGTCAAGTAATGTTTCACGGGAG 58.938 43.478 0.00 0.00 0.00 4.30
5474 7259 5.029650 TGCGATGTCAAGTAATGTTTCAC 57.970 39.130 0.00 0.00 0.00 3.18
5490 7275 7.682593 TGCAGTTGAAATAATTATTGCGATG 57.317 32.000 11.42 10.13 0.00 3.84
5516 7301 0.169672 CCTGCTTGCAACTGAATCCG 59.830 55.000 0.00 0.00 0.00 4.18
5534 7319 6.336842 TCACTTAGGTTCGTATATAAGCCC 57.663 41.667 0.00 0.00 0.00 5.19
5536 7321 9.640963 ATGATTCACTTAGGTTCGTATATAAGC 57.359 33.333 0.00 0.00 0.00 3.09
5541 7326 7.591421 TCCATGATTCACTTAGGTTCGTATA 57.409 36.000 0.00 0.00 0.00 1.47
5546 7331 8.561738 TTAGTTTCCATGATTCACTTAGGTTC 57.438 34.615 0.00 0.00 0.00 3.62
5577 7362 9.740239 TTGCAGCTAATAAAATCAAAGATGATC 57.260 29.630 0.00 0.00 45.60 2.92
5604 7389 0.037326 TCCTGCGCAAACTAGGTCAG 60.037 55.000 13.05 0.00 33.30 3.51
5605 7390 0.613260 ATCCTGCGCAAACTAGGTCA 59.387 50.000 13.05 0.00 33.30 4.02
5606 7391 1.009829 CATCCTGCGCAAACTAGGTC 58.990 55.000 13.05 0.00 33.30 3.85
5607 7392 0.613260 TCATCCTGCGCAAACTAGGT 59.387 50.000 13.05 0.00 33.30 3.08
5608 7393 1.959042 ATCATCCTGCGCAAACTAGG 58.041 50.000 13.05 9.21 0.00 3.02
5609 7394 3.242870 GGAAATCATCCTGCGCAAACTAG 60.243 47.826 13.05 0.00 45.56 2.57
5610 7395 2.682856 GGAAATCATCCTGCGCAAACTA 59.317 45.455 13.05 0.00 45.56 2.24
5611 7396 1.474077 GGAAATCATCCTGCGCAAACT 59.526 47.619 13.05 0.00 45.56 2.66
5612 7397 1.913317 GGAAATCATCCTGCGCAAAC 58.087 50.000 13.05 0.00 45.56 2.93
5642 7427 5.423610 AGTGTACTATCTTTGCACTGGAGAT 59.576 40.000 0.00 0.00 38.74 2.75
5643 7428 4.772624 AGTGTACTATCTTTGCACTGGAGA 59.227 41.667 0.00 0.00 38.74 3.71
5644 7429 5.078411 AGTGTACTATCTTTGCACTGGAG 57.922 43.478 0.00 0.00 38.74 3.86
5648 7433 4.891992 ACCAGTGTACTATCTTTGCACT 57.108 40.909 0.00 0.00 40.54 4.40
5649 7434 6.090898 CAGTAACCAGTGTACTATCTTTGCAC 59.909 42.308 0.00 0.00 0.00 4.57
5685 7473 6.888088 AGTACTGTTTACCTTTTTGTTGGTCT 59.112 34.615 0.00 0.00 37.74 3.85
5760 7548 4.456911 TGTTAAGAAGGCTTGCATCTTGAG 59.543 41.667 3.46 0.00 35.22 3.02
5770 7558 8.560355 ACATTTTGTTTTTGTTAAGAAGGCTT 57.440 26.923 0.00 0.00 38.15 4.35
5771 7559 9.093970 GTACATTTTGTTTTTGTTAAGAAGGCT 57.906 29.630 0.00 0.00 0.00 4.58
5772 7560 9.093970 AGTACATTTTGTTTTTGTTAAGAAGGC 57.906 29.630 0.00 0.00 0.00 4.35
5800 7588 9.252962 CCAGAAAAGGAAAATCATAATATGCAC 57.747 33.333 0.00 0.00 0.00 4.57
5829 7617 5.581085 AGTCTTCTATAATGTTTCACCGTGC 59.419 40.000 0.00 0.00 0.00 5.34
5862 7650 9.863650 TTGGTTAGCATCTATAGTAGTTCTAGT 57.136 33.333 0.00 0.00 31.67 2.57
5870 7658 9.555727 GGTCATTTTTGGTTAGCATCTATAGTA 57.444 33.333 0.00 0.00 0.00 1.82
5871 7659 7.502561 GGGTCATTTTTGGTTAGCATCTATAGT 59.497 37.037 0.00 0.00 0.00 2.12
5872 7660 7.040409 GGGGTCATTTTTGGTTAGCATCTATAG 60.040 40.741 0.00 0.00 0.00 1.31
5873 7661 6.775629 GGGGTCATTTTTGGTTAGCATCTATA 59.224 38.462 0.00 0.00 0.00 1.31
5874 7662 5.598417 GGGGTCATTTTTGGTTAGCATCTAT 59.402 40.000 0.00 0.00 0.00 1.98
5875 7663 4.953579 GGGGTCATTTTTGGTTAGCATCTA 59.046 41.667 0.00 0.00 0.00 1.98
5876 7664 3.769300 GGGGTCATTTTTGGTTAGCATCT 59.231 43.478 0.00 0.00 0.00 2.90
5877 7665 3.118775 GGGGGTCATTTTTGGTTAGCATC 60.119 47.826 0.00 0.00 0.00 3.91
5878 7666 2.837591 GGGGGTCATTTTTGGTTAGCAT 59.162 45.455 0.00 0.00 0.00 3.79
5879 7667 2.252714 GGGGGTCATTTTTGGTTAGCA 58.747 47.619 0.00 0.00 0.00 3.49
5880 7668 1.203758 CGGGGGTCATTTTTGGTTAGC 59.796 52.381 0.00 0.00 0.00 3.09
5881 7669 2.230266 CACGGGGGTCATTTTTGGTTAG 59.770 50.000 0.00 0.00 0.00 2.34
5882 7670 2.240279 CACGGGGGTCATTTTTGGTTA 58.760 47.619 0.00 0.00 0.00 2.85
5883 7671 1.044611 CACGGGGGTCATTTTTGGTT 58.955 50.000 0.00 0.00 0.00 3.67
5884 7672 0.105913 ACACGGGGGTCATTTTTGGT 60.106 50.000 0.00 0.00 0.00 3.67
5885 7673 0.316841 CACACGGGGGTCATTTTTGG 59.683 55.000 0.00 0.00 0.00 3.28
5886 7674 1.036707 ACACACGGGGGTCATTTTTG 58.963 50.000 0.00 0.00 0.00 2.44
5887 7675 1.036707 CACACACGGGGGTCATTTTT 58.963 50.000 0.00 0.00 0.00 1.94
5888 7676 1.460273 GCACACACGGGGGTCATTTT 61.460 55.000 0.00 0.00 0.00 1.82
5889 7677 1.901464 GCACACACGGGGGTCATTT 60.901 57.895 0.00 0.00 0.00 2.32
5890 7678 2.282180 GCACACACGGGGGTCATT 60.282 61.111 0.00 0.00 0.00 2.57
5891 7679 2.424842 ATTGCACACACGGGGGTCAT 62.425 55.000 0.00 0.00 0.00 3.06
5892 7680 2.632602 AATTGCACACACGGGGGTCA 62.633 55.000 0.00 0.00 0.00 4.02
5893 7681 1.460273 AAATTGCACACACGGGGGTC 61.460 55.000 0.00 0.00 0.00 4.46
5894 7682 1.045911 AAAATTGCACACACGGGGGT 61.046 50.000 0.00 0.00 0.00 4.95
5895 7683 0.105778 AAAAATTGCACACACGGGGG 59.894 50.000 0.00 0.00 0.00 5.40
5896 7684 1.202463 TGAAAAATTGCACACACGGGG 60.202 47.619 0.00 0.00 0.00 5.73
5897 7685 2.215907 TGAAAAATTGCACACACGGG 57.784 45.000 0.00 0.00 0.00 5.28
5898 7686 3.801050 TCATTGAAAAATTGCACACACGG 59.199 39.130 0.00 0.00 0.00 4.94
5899 7687 5.579384 ATCATTGAAAAATTGCACACACG 57.421 34.783 0.00 0.00 0.00 4.49
5900 7688 5.175491 ACGATCATTGAAAAATTGCACACAC 59.825 36.000 0.00 0.00 0.00 3.82
5901 7689 5.175308 CACGATCATTGAAAAATTGCACACA 59.825 36.000 0.00 0.00 0.00 3.72
5902 7690 5.175491 ACACGATCATTGAAAAATTGCACAC 59.825 36.000 0.00 0.00 0.00 3.82
5903 7691 5.288015 ACACGATCATTGAAAAATTGCACA 58.712 33.333 0.00 0.00 0.00 4.57
5904 7692 5.164061 GGACACGATCATTGAAAAATTGCAC 60.164 40.000 0.00 0.00 0.00 4.57
5905 7693 4.922692 GGACACGATCATTGAAAAATTGCA 59.077 37.500 0.00 0.00 0.00 4.08
5906 7694 4.922692 TGGACACGATCATTGAAAAATTGC 59.077 37.500 0.00 0.00 0.00 3.56
5907 7695 6.642131 AGTTGGACACGATCATTGAAAAATTG 59.358 34.615 0.00 0.00 0.00 2.32
5908 7696 6.642131 CAGTTGGACACGATCATTGAAAAATT 59.358 34.615 0.00 0.00 0.00 1.82
5909 7697 6.016360 TCAGTTGGACACGATCATTGAAAAAT 60.016 34.615 0.00 0.00 0.00 1.82
5910 7698 5.298026 TCAGTTGGACACGATCATTGAAAAA 59.702 36.000 0.00 0.00 0.00 1.94
5911 7699 4.819088 TCAGTTGGACACGATCATTGAAAA 59.181 37.500 0.00 0.00 0.00 2.29
5912 7700 4.384940 TCAGTTGGACACGATCATTGAAA 58.615 39.130 0.00 0.00 0.00 2.69
5913 7701 4.001618 TCAGTTGGACACGATCATTGAA 57.998 40.909 0.00 0.00 0.00 2.69
5914 7702 3.676291 TCAGTTGGACACGATCATTGA 57.324 42.857 0.00 0.00 0.00 2.57
5915 7703 4.747540 TTTCAGTTGGACACGATCATTG 57.252 40.909 0.00 0.00 0.00 2.82
5916 7704 4.578516 TGTTTTCAGTTGGACACGATCATT 59.421 37.500 0.00 0.00 0.00 2.57
5917 7705 4.133820 TGTTTTCAGTTGGACACGATCAT 58.866 39.130 0.00 0.00 0.00 2.45
5918 7706 3.536570 TGTTTTCAGTTGGACACGATCA 58.463 40.909 0.00 0.00 0.00 2.92
5919 7707 4.035208 AGTTGTTTTCAGTTGGACACGATC 59.965 41.667 0.00 0.00 0.00 3.69
5920 7708 3.945285 AGTTGTTTTCAGTTGGACACGAT 59.055 39.130 0.00 0.00 0.00 3.73
5921 7709 3.340034 AGTTGTTTTCAGTTGGACACGA 58.660 40.909 0.00 0.00 0.00 4.35
5922 7710 3.757745 AGTTGTTTTCAGTTGGACACG 57.242 42.857 0.00 0.00 0.00 4.49
5923 7711 5.971202 CACATAGTTGTTTTCAGTTGGACAC 59.029 40.000 0.00 0.00 32.34 3.67
5924 7712 5.650266 ACACATAGTTGTTTTCAGTTGGACA 59.350 36.000 0.00 0.00 32.34 4.02
5925 7713 5.971202 CACACATAGTTGTTTTCAGTTGGAC 59.029 40.000 0.00 0.00 32.34 4.02
5926 7714 5.449862 GCACACATAGTTGTTTTCAGTTGGA 60.450 40.000 0.00 0.00 32.34 3.53
5927 7715 4.739716 GCACACATAGTTGTTTTCAGTTGG 59.260 41.667 0.00 0.00 32.34 3.77
5928 7716 5.339177 TGCACACATAGTTGTTTTCAGTTG 58.661 37.500 0.00 0.00 32.34 3.16
5929 7717 5.574891 TGCACACATAGTTGTTTTCAGTT 57.425 34.783 0.00 0.00 32.34 3.16
5930 7718 5.574891 TTGCACACATAGTTGTTTTCAGT 57.425 34.783 0.00 0.00 32.34 3.41
5931 7719 6.696583 TCAATTGCACACATAGTTGTTTTCAG 59.303 34.615 0.00 0.00 32.34 3.02
5932 7720 6.567959 TCAATTGCACACATAGTTGTTTTCA 58.432 32.000 0.00 0.00 32.34 2.69
5933 7721 7.462109 TTCAATTGCACACATAGTTGTTTTC 57.538 32.000 0.00 0.00 32.34 2.29
5934 7722 7.548780 AGTTTCAATTGCACACATAGTTGTTTT 59.451 29.630 0.00 0.00 32.34 2.43
5935 7723 7.041107 AGTTTCAATTGCACACATAGTTGTTT 58.959 30.769 0.00 0.00 32.34 2.83
5936 7724 6.572519 AGTTTCAATTGCACACATAGTTGTT 58.427 32.000 0.00 0.00 32.34 2.83
5937 7725 6.147864 AGTTTCAATTGCACACATAGTTGT 57.852 33.333 0.00 0.00 36.15 3.32
5938 7726 7.362662 AGTAGTTTCAATTGCACACATAGTTG 58.637 34.615 0.00 0.00 0.00 3.16
5939 7727 7.510549 AGTAGTTTCAATTGCACACATAGTT 57.489 32.000 0.00 0.00 0.00 2.24
5940 7728 8.792830 ATAGTAGTTTCAATTGCACACATAGT 57.207 30.769 0.00 0.00 0.00 2.12
5943 7731 9.618890 ATCTATAGTAGTTTCAATTGCACACAT 57.381 29.630 0.00 0.00 0.00 3.21
5944 7732 8.882736 CATCTATAGTAGTTTCAATTGCACACA 58.117 33.333 0.00 0.00 0.00 3.72
5945 7733 7.852945 GCATCTATAGTAGTTTCAATTGCACAC 59.147 37.037 0.00 0.00 0.00 3.82
5946 7734 7.012327 GGCATCTATAGTAGTTTCAATTGCACA 59.988 37.037 0.00 0.00 0.00 4.57
5947 7735 7.012327 TGGCATCTATAGTAGTTTCAATTGCAC 59.988 37.037 0.00 0.00 0.00 4.57
5948 7736 7.053498 TGGCATCTATAGTAGTTTCAATTGCA 58.947 34.615 0.00 0.00 0.00 4.08
5949 7737 7.496529 TGGCATCTATAGTAGTTTCAATTGC 57.503 36.000 0.00 0.00 0.00 3.56
5950 7738 8.892723 TGTTGGCATCTATAGTAGTTTCAATTG 58.107 33.333 0.00 0.00 0.00 2.32
5951 7739 9.461312 TTGTTGGCATCTATAGTAGTTTCAATT 57.539 29.630 0.00 0.00 0.00 2.32
5952 7740 9.461312 TTTGTTGGCATCTATAGTAGTTTCAAT 57.539 29.630 0.00 0.00 0.00 2.57
5953 7741 8.856153 TTTGTTGGCATCTATAGTAGTTTCAA 57.144 30.769 0.00 0.00 0.00 2.69
5954 7742 8.856153 TTTTGTTGGCATCTATAGTAGTTTCA 57.144 30.769 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.