Multiple sequence alignment - TraesCS4A01G328400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G328400 chr4A 100.000 4141 0 0 1 4141 614034643 614030503 0.000000e+00 7648.0
1 TraesCS4A01G328400 chr4A 90.991 888 78 2 1549 2435 614085196 614084310 0.000000e+00 1195.0
2 TraesCS4A01G328400 chr4A 90.878 888 79 2 1549 2435 614043374 614042488 0.000000e+00 1190.0
3 TraesCS4A01G328400 chr4A 90.878 888 79 2 1549 2435 614064283 614063397 0.000000e+00 1190.0
4 TraesCS4A01G328400 chr4A 89.010 919 101 0 1465 2383 614102665 614101747 0.000000e+00 1138.0
5 TraesCS4A01G328400 chr4A 84.211 513 65 10 2641 3150 614063342 614062843 6.220000e-133 484.0
6 TraesCS4A01G328400 chr4A 84.016 513 66 10 2641 3150 614084255 614083756 2.900000e-131 479.0
7 TraesCS4A01G328400 chr4A 83.431 513 69 10 2641 3150 614042433 614041934 2.920000e-126 462.0
8 TraesCS4A01G328400 chr4A 92.334 287 19 1 1014 1300 614099366 614099083 4.980000e-109 405.0
9 TraesCS4A01G328400 chr4A 87.568 185 16 1 10 194 145731136 145730959 1.510000e-49 207.0
10 TraesCS4A01G328400 chr4A 100.000 34 0 0 2873 2906 614031574 614031541 3.460000e-06 63.9
11 TraesCS4A01G328400 chr4A 100.000 34 0 0 3070 3103 614031771 614031738 3.460000e-06 63.9
12 TraesCS4A01G328400 chr4A 97.059 34 1 0 2873 2906 614042014 614041981 1.610000e-04 58.4
13 TraesCS4A01G328400 chr4A 97.059 34 1 0 2873 2906 614062923 614062890 1.610000e-04 58.4
14 TraesCS4A01G328400 chr5D 91.581 2518 150 25 1018 3499 554500819 554503310 0.000000e+00 3419.0
15 TraesCS4A01G328400 chr5D 89.325 918 96 2 1465 2381 554479202 554480118 0.000000e+00 1151.0
16 TraesCS4A01G328400 chr5D 87.752 645 32 14 3496 4115 554503367 554503989 0.000000e+00 710.0
17 TraesCS4A01G328400 chr5D 83.301 509 70 8 2641 3147 554480203 554480698 4.880000e-124 455.0
18 TraesCS4A01G328400 chr5D 81.518 303 22 12 342 628 481480189 481480473 6.970000e-53 219.0
19 TraesCS4A01G328400 chr5D 80.268 299 23 13 366 628 441922004 441921706 4.220000e-45 193.0
20 TraesCS4A01G328400 chr5D 77.261 387 44 25 270 629 493525084 493525453 1.970000e-43 187.0
21 TraesCS4A01G328400 chr5D 97.701 87 2 0 731 817 383306975 383306889 2.580000e-32 150.0
22 TraesCS4A01G328400 chr5B 89.822 2535 196 27 1014 3499 696182291 696179770 0.000000e+00 3195.0
23 TraesCS4A01G328400 chr5B 89.204 917 99 0 1465 2381 696185242 696184326 0.000000e+00 1146.0
24 TraesCS4A01G328400 chr5B 87.102 566 34 13 3581 4115 696179655 696179098 4.580000e-169 604.0
25 TraesCS4A01G328400 chr5B 93.814 97 5 1 721 817 518315812 518315717 1.200000e-30 145.0
26 TraesCS4A01G328400 chr5B 88.889 54 5 1 639 691 43202124 43202071 9.610000e-07 65.8
27 TraesCS4A01G328400 chr5B 100.000 34 0 0 3070 3103 696180420 696180387 3.460000e-06 63.9
28 TraesCS4A01G328400 chr2A 95.349 645 12 3 1 627 646631306 646631950 0.000000e+00 1009.0
29 TraesCS4A01G328400 chr2A 81.645 681 39 23 1 627 361458634 361457986 1.730000e-133 486.0
30 TraesCS4A01G328400 chr2A 97.674 86 2 0 732 817 78805676 78805761 9.270000e-32 148.0
31 TraesCS4A01G328400 chr7A 93.643 645 23 3 1 627 80134975 80134331 0.000000e+00 948.0
32 TraesCS4A01G328400 chr7A 86.997 646 51 7 1 627 20595095 20595726 0.000000e+00 697.0
33 TraesCS4A01G328400 chr6A 85.634 355 25 6 298 630 604154666 604154316 2.370000e-92 350.0
34 TraesCS4A01G328400 chr6A 86.885 61 7 1 637 696 533990490 533990550 2.670000e-07 67.6
35 TraesCS4A01G328400 chr1A 82.480 371 30 17 290 630 585345605 585345240 4.050000e-75 292.0
36 TraesCS4A01G328400 chr1A 87.826 115 9 5 733 845 540456183 540456072 3.360000e-26 130.0
37 TraesCS4A01G328400 chr1A 87.500 56 6 1 637 691 554232419 554232364 3.460000e-06 63.9
38 TraesCS4A01G328400 chr2B 79.245 318 33 19 330 627 142947968 142947664 1.520000e-44 191.0
39 TraesCS4A01G328400 chr2B 96.629 89 3 0 729 817 678068683 678068771 9.270000e-32 148.0
40 TraesCS4A01G328400 chr3D 89.928 139 14 0 3251 3389 47481543 47481681 3.290000e-41 180.0
41 TraesCS4A01G328400 chr3D 97.674 86 2 0 732 817 386613278 386613363 9.270000e-32 148.0
42 TraesCS4A01G328400 chr3B 89.928 139 14 0 3251 3389 74282728 74282866 3.290000e-41 180.0
43 TraesCS4A01G328400 chr3A 89.437 142 15 0 3251 3392 59519291 59519432 3.290000e-41 180.0
44 TraesCS4A01G328400 chr3A 89.286 56 5 1 637 691 555743179 555743234 7.430000e-08 69.4
45 TraesCS4A01G328400 chr3A 89.286 56 5 1 637 691 555763160 555763215 7.430000e-08 69.4
46 TraesCS4A01G328400 chr3A 97.500 40 0 1 637 675 727661921 727661960 2.670000e-07 67.6
47 TraesCS4A01G328400 chr5A 97.727 88 2 0 732 819 2816985 2816898 7.170000e-33 152.0
48 TraesCS4A01G328400 chr5A 87.500 56 6 1 637 691 546388938 546388993 3.460000e-06 63.9
49 TraesCS4A01G328400 chr7B 97.674 86 2 0 732 817 465162747 465162832 9.270000e-32 148.0
50 TraesCS4A01G328400 chr2D 91.667 108 8 1 526 632 448202843 448202950 9.270000e-32 148.0
51 TraesCS4A01G328400 chr1B 91.176 102 7 1 716 817 453132484 453132583 2.010000e-28 137.0
52 TraesCS4A01G328400 chr1B 92.308 52 4 0 643 694 664016221 664016170 1.600000e-09 75.0
53 TraesCS4A01G328400 chr6B 86.885 61 7 1 637 696 87652724 87652664 2.670000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G328400 chr4A 614030503 614034643 4140 True 2591.933333 7648 100.0000 1 4141 3 chr4A.!!$R2 4140
1 TraesCS4A01G328400 chr4A 614083756 614085196 1440 True 837.000000 1195 87.5035 1549 3150 2 chr4A.!!$R5 1601
2 TraesCS4A01G328400 chr4A 614099083 614102665 3582 True 771.500000 1138 90.6720 1014 2383 2 chr4A.!!$R6 1369
3 TraesCS4A01G328400 chr4A 614062843 614064283 1440 True 577.466667 1190 90.7160 1549 3150 3 chr4A.!!$R4 1601
4 TraesCS4A01G328400 chr4A 614041934 614043374 1440 True 570.133333 1190 90.4560 1549 3150 3 chr4A.!!$R3 1601
5 TraesCS4A01G328400 chr5D 554500819 554503989 3170 False 2064.500000 3419 89.6665 1018 4115 2 chr5D.!!$F4 3097
6 TraesCS4A01G328400 chr5D 554479202 554480698 1496 False 803.000000 1151 86.3130 1465 3147 2 chr5D.!!$F3 1682
7 TraesCS4A01G328400 chr5B 696179098 696185242 6144 True 1252.225000 3195 91.5320 1014 4115 4 chr5B.!!$R3 3101
8 TraesCS4A01G328400 chr2A 646631306 646631950 644 False 1009.000000 1009 95.3490 1 627 1 chr2A.!!$F2 626
9 TraesCS4A01G328400 chr2A 361457986 361458634 648 True 486.000000 486 81.6450 1 627 1 chr2A.!!$R1 626
10 TraesCS4A01G328400 chr7A 80134331 80134975 644 True 948.000000 948 93.6430 1 627 1 chr7A.!!$R1 626
11 TraesCS4A01G328400 chr7A 20595095 20595726 631 False 697.000000 697 86.9970 1 627 1 chr7A.!!$F1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
712 755 0.035915 GAAGGGTTCTCTGCCAGTCC 60.036 60.0 0.00 0.0 0.00 3.85 F
965 1008 0.095935 CTGCAGAAATCGAGCCGTTG 59.904 55.0 8.42 0.0 0.00 4.10 F
996 1039 0.179067 ACTTTTCTCCCGTCGCAACA 60.179 50.0 0.00 0.0 0.00 3.33 F
1004 1047 0.236187 CCCGTCGCAACATTCGAAAA 59.764 50.0 0.00 0.0 37.73 2.29 F
2780 6240 0.548510 AGGCTATGAAGGGGAGCAAC 59.451 55.0 0.00 0.0 37.98 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1919 1965 0.883814 GAGCCTCATTCATCTGGCCG 60.884 60.000 0.00 0.00 45.94 6.13 R
2730 6190 1.316266 CCATCTCCTCCCACCTCCT 59.684 63.158 0.00 0.00 0.00 3.69 R
2929 6390 2.554142 CAGCTCACACTGTTTCAGTCA 58.446 47.619 0.00 0.00 43.43 3.41 R
3007 6471 5.523188 AGCTTGTTCATCAAAGAGATCGATC 59.477 40.000 17.91 17.91 33.72 3.69 R
3786 7724 0.738389 AACAACACTTCAGCCCAACG 59.262 50.000 0.00 0.00 0.00 4.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 71 2.550699 TAATGGGCCGTGCTCCTTGG 62.551 60.000 0.00 0.00 0.00 3.61
102 106 2.690326 GTGCACTCCACACGTTTCT 58.310 52.632 10.32 0.00 44.06 2.52
247 273 8.298854 CACACATGAAAAATATTTCTGTCCTCA 58.701 33.333 0.00 0.00 44.32 3.86
363 404 2.038033 ACGTACACACCCACTAGCAAAT 59.962 45.455 0.00 0.00 0.00 2.32
487 530 2.228822 CACAAACATACCACTTGAGGGC 59.771 50.000 0.00 0.00 0.00 5.19
488 531 2.158534 ACAAACATACCACTTGAGGGCA 60.159 45.455 0.00 0.00 0.00 5.36
489 532 2.890311 CAAACATACCACTTGAGGGCAA 59.110 45.455 0.00 0.00 0.00 4.52
490 533 2.969821 ACATACCACTTGAGGGCAAA 57.030 45.000 0.00 0.00 32.73 3.68
491 534 2.795329 ACATACCACTTGAGGGCAAAG 58.205 47.619 0.00 0.00 32.73 2.77
492 535 2.094675 CATACCACTTGAGGGCAAAGG 58.905 52.381 0.00 0.00 36.10 3.11
493 536 0.404040 TACCACTTGAGGGCAAAGGG 59.596 55.000 0.00 0.00 34.98 3.95
494 537 1.607467 CCACTTGAGGGCAAAGGGG 60.607 63.158 1.32 1.32 32.73 4.79
495 538 1.153756 CACTTGAGGGCAAAGGGGT 59.846 57.895 0.00 0.00 32.73 4.95
496 539 0.895559 CACTTGAGGGCAAAGGGGTC 60.896 60.000 0.00 0.00 32.73 4.46
497 540 1.068352 ACTTGAGGGCAAAGGGGTCT 61.068 55.000 0.00 0.00 32.73 3.85
498 541 0.113190 CTTGAGGGCAAAGGGGTCTT 59.887 55.000 0.00 0.00 32.73 3.01
499 542 0.560688 TTGAGGGCAAAGGGGTCTTT 59.439 50.000 0.00 0.00 43.41 2.52
500 543 0.560688 TGAGGGCAAAGGGGTCTTTT 59.439 50.000 0.00 0.00 40.92 2.27
501 544 1.257743 GAGGGCAAAGGGGTCTTTTC 58.742 55.000 0.00 0.00 40.92 2.29
502 545 0.560688 AGGGCAAAGGGGTCTTTTCA 59.439 50.000 0.00 0.00 40.92 2.69
503 546 1.062505 AGGGCAAAGGGGTCTTTTCAA 60.063 47.619 0.00 0.00 40.92 2.69
504 547 1.344438 GGGCAAAGGGGTCTTTTCAAG 59.656 52.381 0.00 0.00 40.92 3.02
505 548 2.039418 GGCAAAGGGGTCTTTTCAAGT 58.961 47.619 0.00 0.00 40.92 3.16
506 549 2.224042 GGCAAAGGGGTCTTTTCAAGTG 60.224 50.000 0.00 0.00 40.92 3.16
507 550 2.430694 GCAAAGGGGTCTTTTCAAGTGT 59.569 45.455 0.00 0.00 40.92 3.55
508 551 3.490933 GCAAAGGGGTCTTTTCAAGTGTC 60.491 47.826 0.00 0.00 40.92 3.67
509 552 3.662759 AAGGGGTCTTTTCAAGTGTCA 57.337 42.857 0.00 0.00 0.00 3.58
510 553 3.884037 AGGGGTCTTTTCAAGTGTCAT 57.116 42.857 0.00 0.00 0.00 3.06
511 554 4.184649 AGGGGTCTTTTCAAGTGTCATT 57.815 40.909 0.00 0.00 0.00 2.57
512 555 4.546674 AGGGGTCTTTTCAAGTGTCATTT 58.453 39.130 0.00 0.00 0.00 2.32
513 556 4.962362 AGGGGTCTTTTCAAGTGTCATTTT 59.038 37.500 0.00 0.00 0.00 1.82
514 557 6.133356 AGGGGTCTTTTCAAGTGTCATTTTA 58.867 36.000 0.00 0.00 0.00 1.52
515 558 6.265422 AGGGGTCTTTTCAAGTGTCATTTTAG 59.735 38.462 0.00 0.00 0.00 1.85
516 559 5.920840 GGGTCTTTTCAAGTGTCATTTTAGC 59.079 40.000 0.00 0.00 0.00 3.09
517 560 6.239036 GGGTCTTTTCAAGTGTCATTTTAGCT 60.239 38.462 0.00 0.00 0.00 3.32
518 561 6.858478 GGTCTTTTCAAGTGTCATTTTAGCTC 59.142 38.462 0.00 0.00 0.00 4.09
519 562 7.417612 GTCTTTTCAAGTGTCATTTTAGCTCA 58.582 34.615 0.00 0.00 0.00 4.26
520 563 7.915397 GTCTTTTCAAGTGTCATTTTAGCTCAA 59.085 33.333 0.00 0.00 0.00 3.02
521 564 8.465999 TCTTTTCAAGTGTCATTTTAGCTCAAA 58.534 29.630 0.00 0.00 0.00 2.69
522 565 8.994429 TTTTCAAGTGTCATTTTAGCTCAAAA 57.006 26.923 0.00 0.96 40.34 2.44
523 566 9.598517 TTTTCAAGTGTCATTTTAGCTCAAAAT 57.401 25.926 0.00 3.18 45.72 1.82
535 578 9.723601 ATTTTAGCTCAAAATGAAGGCATAAAA 57.276 25.926 10.95 0.00 43.65 1.52
536 579 9.723601 TTTTAGCTCAAAATGAAGGCATAAAAT 57.276 25.926 0.00 0.00 33.44 1.82
537 580 9.723601 TTTAGCTCAAAATGAAGGCATAAAATT 57.276 25.926 0.00 0.00 33.44 1.82
538 581 9.723601 TTAGCTCAAAATGAAGGCATAAAATTT 57.276 25.926 0.00 0.00 33.44 1.82
540 583 9.723601 AGCTCAAAATGAAGGCATAAAATTTAA 57.276 25.926 0.00 0.00 33.44 1.52
546 589 9.705290 AAATGAAGGCATAAAATTTAAACTCGT 57.295 25.926 0.00 0.00 33.44 4.18
547 590 9.705290 AATGAAGGCATAAAATTTAAACTCGTT 57.295 25.926 0.00 0.00 33.44 3.85
548 591 8.514136 TGAAGGCATAAAATTTAAACTCGTTG 57.486 30.769 0.00 0.00 0.00 4.10
549 592 8.138712 TGAAGGCATAAAATTTAAACTCGTTGT 58.861 29.630 0.00 0.00 0.00 3.32
550 593 8.880878 AAGGCATAAAATTTAAACTCGTTGTT 57.119 26.923 0.00 0.00 41.29 2.83
551 594 9.968870 AAGGCATAAAATTTAAACTCGTTGTTA 57.031 25.926 0.00 0.00 38.03 2.41
552 595 9.620660 AGGCATAAAATTTAAACTCGTTGTTAG 57.379 29.630 0.00 0.00 38.03 2.34
553 596 9.615295 GGCATAAAATTTAAACTCGTTGTTAGA 57.385 29.630 0.00 0.00 38.03 2.10
562 605 9.985730 TTTAAACTCGTTGTTAGATAGGAAAGA 57.014 29.630 0.00 0.00 38.03 2.52
563 606 9.985730 TTAAACTCGTTGTTAGATAGGAAAGAA 57.014 29.630 0.00 0.00 38.03 2.52
564 607 8.897872 AAACTCGTTGTTAGATAGGAAAGAAA 57.102 30.769 0.00 0.00 38.03 2.52
565 608 9.503399 AAACTCGTTGTTAGATAGGAAAGAAAT 57.497 29.630 0.00 0.00 38.03 2.17
566 609 9.503399 AACTCGTTGTTAGATAGGAAAGAAATT 57.497 29.630 0.00 0.00 37.07 1.82
587 630 9.971922 GAAATTATTTCTGGATGTCAAATAGGG 57.028 33.333 10.15 0.00 36.73 3.53
588 631 6.959639 TTATTTCTGGATGTCAAATAGGGC 57.040 37.500 0.00 0.00 0.00 5.19
589 632 4.314522 TTTCTGGATGTCAAATAGGGCA 57.685 40.909 0.00 0.00 0.00 5.36
590 633 4.524802 TTCTGGATGTCAAATAGGGCAT 57.475 40.909 0.00 0.00 0.00 4.40
591 634 5.645056 TTCTGGATGTCAAATAGGGCATA 57.355 39.130 0.00 0.00 0.00 3.14
592 635 5.645056 TCTGGATGTCAAATAGGGCATAA 57.355 39.130 0.00 0.00 0.00 1.90
593 636 6.012337 TCTGGATGTCAAATAGGGCATAAA 57.988 37.500 0.00 0.00 0.00 1.40
594 637 6.430864 TCTGGATGTCAAATAGGGCATAAAA 58.569 36.000 0.00 0.00 0.00 1.52
595 638 7.068702 TCTGGATGTCAAATAGGGCATAAAAT 58.931 34.615 0.00 0.00 0.00 1.82
596 639 7.564660 TCTGGATGTCAAATAGGGCATAAAATT 59.435 33.333 0.00 0.00 0.00 1.82
597 640 8.088463 TGGATGTCAAATAGGGCATAAAATTT 57.912 30.769 0.00 0.00 0.00 1.82
598 641 9.206690 TGGATGTCAAATAGGGCATAAAATTTA 57.793 29.630 0.00 0.00 0.00 1.40
599 642 9.696917 GGATGTCAAATAGGGCATAAAATTTAG 57.303 33.333 0.00 0.00 0.00 1.85
600 643 9.696917 GATGTCAAATAGGGCATAAAATTTAGG 57.303 33.333 0.00 0.00 0.00 2.69
601 644 7.496747 TGTCAAATAGGGCATAAAATTTAGGC 58.503 34.615 13.25 13.25 0.00 3.93
602 645 7.124901 TGTCAAATAGGGCATAAAATTTAGGCA 59.875 33.333 21.35 4.34 0.00 4.75
603 646 7.438160 GTCAAATAGGGCATAAAATTTAGGCAC 59.562 37.037 21.35 18.75 0.00 5.01
604 647 5.705609 ATAGGGCATAAAATTTAGGCACG 57.294 39.130 21.35 0.00 31.96 5.34
605 648 2.693074 AGGGCATAAAATTTAGGCACGG 59.307 45.455 21.35 0.00 31.96 4.94
606 649 2.429250 GGGCATAAAATTTAGGCACGGT 59.571 45.455 21.35 0.00 0.00 4.83
607 650 3.443976 GGCATAAAATTTAGGCACGGTG 58.556 45.455 21.35 3.15 0.00 4.94
608 651 3.119280 GGCATAAAATTTAGGCACGGTGT 60.119 43.478 21.35 0.00 0.00 4.16
609 652 4.490743 GCATAAAATTTAGGCACGGTGTT 58.509 39.130 16.20 1.41 0.00 3.32
610 653 5.393243 GGCATAAAATTTAGGCACGGTGTTA 60.393 40.000 21.35 0.43 0.00 2.41
611 654 6.094061 GCATAAAATTTAGGCACGGTGTTAA 58.906 36.000 16.20 6.57 0.00 2.01
612 655 6.586844 GCATAAAATTTAGGCACGGTGTTAAA 59.413 34.615 16.20 14.21 0.00 1.52
613 656 7.276878 GCATAAAATTTAGGCACGGTGTTAAAT 59.723 33.333 16.20 18.52 0.00 1.40
614 657 9.790389 CATAAAATTTAGGCACGGTGTTAAATA 57.210 29.630 21.70 13.35 0.00 1.40
616 659 8.751302 AAAATTTAGGCACGGTGTTAAATAAG 57.249 30.769 21.70 0.00 0.00 1.73
617 660 5.883503 TTTAGGCACGGTGTTAAATAAGG 57.116 39.130 10.24 0.00 0.00 2.69
618 661 3.706600 AGGCACGGTGTTAAATAAGGA 57.293 42.857 10.24 0.00 0.00 3.36
619 662 4.023726 AGGCACGGTGTTAAATAAGGAA 57.976 40.909 10.24 0.00 0.00 3.36
620 663 4.595986 AGGCACGGTGTTAAATAAGGAAT 58.404 39.130 10.24 0.00 0.00 3.01
621 664 5.014202 AGGCACGGTGTTAAATAAGGAATT 58.986 37.500 10.24 0.00 0.00 2.17
622 665 5.124936 AGGCACGGTGTTAAATAAGGAATTC 59.875 40.000 10.24 0.00 0.00 2.17
623 666 5.124936 GGCACGGTGTTAAATAAGGAATTCT 59.875 40.000 10.24 0.00 0.00 2.40
624 667 6.255950 GCACGGTGTTAAATAAGGAATTCTC 58.744 40.000 10.24 0.00 0.00 2.87
625 668 6.093633 GCACGGTGTTAAATAAGGAATTCTCT 59.906 38.462 10.24 0.00 0.00 3.10
626 669 7.676572 GCACGGTGTTAAATAAGGAATTCTCTC 60.677 40.741 10.24 0.00 0.00 3.20
627 670 7.333423 CACGGTGTTAAATAAGGAATTCTCTCA 59.667 37.037 5.23 0.00 0.00 3.27
628 671 7.881232 ACGGTGTTAAATAAGGAATTCTCTCAA 59.119 33.333 5.23 0.00 0.00 3.02
629 672 8.893727 CGGTGTTAAATAAGGAATTCTCTCAAT 58.106 33.333 5.23 0.00 0.00 2.57
638 681 9.917887 ATAAGGAATTCTCTCAATCTTGAATGT 57.082 29.630 5.23 0.00 36.64 2.71
639 682 7.862512 AGGAATTCTCTCAATCTTGAATGTC 57.137 36.000 5.23 0.00 36.64 3.06
640 683 6.827762 AGGAATTCTCTCAATCTTGAATGTCC 59.172 38.462 5.23 0.00 36.64 4.02
641 684 6.827762 GGAATTCTCTCAATCTTGAATGTCCT 59.172 38.462 5.23 0.00 36.64 3.85
642 685 7.989741 GGAATTCTCTCAATCTTGAATGTCCTA 59.010 37.037 5.23 0.00 36.64 2.94
643 686 8.961294 AATTCTCTCAATCTTGAATGTCCTAG 57.039 34.615 0.00 0.00 36.64 3.02
644 687 6.477053 TCTCTCAATCTTGAATGTCCTAGG 57.523 41.667 0.82 0.82 36.64 3.02
645 688 6.197903 TCTCTCAATCTTGAATGTCCTAGGA 58.802 40.000 7.62 7.62 36.64 2.94
646 689 6.669591 TCTCTCAATCTTGAATGTCCTAGGAA 59.330 38.462 14.65 4.51 36.64 3.36
647 690 6.882656 TCTCAATCTTGAATGTCCTAGGAAG 58.117 40.000 14.65 6.29 36.64 3.46
648 691 5.431765 TCAATCTTGAATGTCCTAGGAAGC 58.568 41.667 14.65 2.23 33.55 3.86
649 692 3.914426 TCTTGAATGTCCTAGGAAGCC 57.086 47.619 14.65 1.39 0.00 4.35
650 693 3.181329 TCTTGAATGTCCTAGGAAGCCA 58.819 45.455 14.65 8.14 0.00 4.75
651 694 3.587061 TCTTGAATGTCCTAGGAAGCCAA 59.413 43.478 14.65 13.73 0.00 4.52
652 695 4.228210 TCTTGAATGTCCTAGGAAGCCAAT 59.772 41.667 14.65 0.00 0.00 3.16
653 696 5.428457 TCTTGAATGTCCTAGGAAGCCAATA 59.572 40.000 14.65 5.85 0.00 1.90
654 697 5.912149 TGAATGTCCTAGGAAGCCAATAT 57.088 39.130 14.65 0.00 0.00 1.28
655 698 5.624159 TGAATGTCCTAGGAAGCCAATATG 58.376 41.667 14.65 0.00 0.00 1.78
656 699 4.647564 ATGTCCTAGGAAGCCAATATGG 57.352 45.455 14.65 0.00 41.55 2.74
667 710 2.427232 CCAATATGGCGGCAGATTTG 57.573 50.000 26.87 20.44 0.00 2.32
668 711 1.682854 CCAATATGGCGGCAGATTTGT 59.317 47.619 26.87 6.27 0.00 2.83
669 712 2.101249 CCAATATGGCGGCAGATTTGTT 59.899 45.455 26.87 6.72 0.00 2.83
670 713 3.117794 CAATATGGCGGCAGATTTGTTG 58.882 45.455 26.87 15.07 0.00 3.33
671 714 1.102154 TATGGCGGCAGATTTGTTGG 58.898 50.000 19.29 0.00 0.00 3.77
672 715 2.125952 GGCGGCAGATTTGTTGGC 60.126 61.111 3.07 0.00 37.72 4.52
673 716 2.639327 GGCGGCAGATTTGTTGGCT 61.639 57.895 3.07 0.00 38.82 4.75
674 717 1.312371 GGCGGCAGATTTGTTGGCTA 61.312 55.000 3.07 0.00 38.82 3.93
675 718 0.099436 GCGGCAGATTTGTTGGCTAG 59.901 55.000 0.00 0.00 38.82 3.42
676 719 1.453155 CGGCAGATTTGTTGGCTAGT 58.547 50.000 0.00 0.00 38.82 2.57
677 720 2.627945 CGGCAGATTTGTTGGCTAGTA 58.372 47.619 0.00 0.00 38.82 1.82
678 721 3.006940 CGGCAGATTTGTTGGCTAGTAA 58.993 45.455 0.00 0.00 38.82 2.24
679 722 3.063997 CGGCAGATTTGTTGGCTAGTAAG 59.936 47.826 0.00 0.00 38.82 2.34
698 741 2.885861 CGGAGGACTCACGAAGGG 59.114 66.667 1.32 0.00 0.00 3.95
699 742 1.977544 CGGAGGACTCACGAAGGGT 60.978 63.158 1.32 0.00 0.00 4.34
700 743 1.533469 CGGAGGACTCACGAAGGGTT 61.533 60.000 1.32 0.00 0.00 4.11
701 744 0.246910 GGAGGACTCACGAAGGGTTC 59.753 60.000 1.32 0.00 0.00 3.62
702 745 1.258676 GAGGACTCACGAAGGGTTCT 58.741 55.000 0.00 0.00 0.00 3.01
703 746 1.202817 GAGGACTCACGAAGGGTTCTC 59.797 57.143 5.42 5.42 0.00 2.87
704 747 1.203075 AGGACTCACGAAGGGTTCTCT 60.203 52.381 0.00 0.00 0.00 3.10
705 748 1.067495 GGACTCACGAAGGGTTCTCTG 60.067 57.143 0.00 0.00 0.00 3.35
706 749 0.318762 ACTCACGAAGGGTTCTCTGC 59.681 55.000 0.00 0.00 0.00 4.26
707 750 0.390472 CTCACGAAGGGTTCTCTGCC 60.390 60.000 0.00 0.00 0.00 4.85
708 751 1.118965 TCACGAAGGGTTCTCTGCCA 61.119 55.000 0.00 0.00 0.00 4.92
709 752 0.671781 CACGAAGGGTTCTCTGCCAG 60.672 60.000 0.00 0.00 0.00 4.85
710 753 1.122019 ACGAAGGGTTCTCTGCCAGT 61.122 55.000 0.00 0.00 0.00 4.00
711 754 0.390472 CGAAGGGTTCTCTGCCAGTC 60.390 60.000 0.00 0.00 0.00 3.51
712 755 0.035915 GAAGGGTTCTCTGCCAGTCC 60.036 60.000 0.00 0.00 0.00 3.85
713 756 1.831652 AAGGGTTCTCTGCCAGTCCG 61.832 60.000 0.00 0.00 0.00 4.79
714 757 2.283529 GGGTTCTCTGCCAGTCCGA 61.284 63.158 0.00 0.00 0.00 4.55
715 758 1.617947 GGGTTCTCTGCCAGTCCGAT 61.618 60.000 0.00 0.00 0.00 4.18
716 759 0.460987 GGTTCTCTGCCAGTCCGATG 60.461 60.000 0.00 0.00 0.00 3.84
717 760 0.247736 GTTCTCTGCCAGTCCGATGT 59.752 55.000 0.00 0.00 0.00 3.06
718 761 0.976641 TTCTCTGCCAGTCCGATGTT 59.023 50.000 0.00 0.00 0.00 2.71
719 762 0.976641 TCTCTGCCAGTCCGATGTTT 59.023 50.000 0.00 0.00 0.00 2.83
720 763 1.347707 TCTCTGCCAGTCCGATGTTTT 59.652 47.619 0.00 0.00 0.00 2.43
721 764 2.565391 TCTCTGCCAGTCCGATGTTTTA 59.435 45.455 0.00 0.00 0.00 1.52
722 765 3.197766 TCTCTGCCAGTCCGATGTTTTAT 59.802 43.478 0.00 0.00 0.00 1.40
723 766 3.531538 TCTGCCAGTCCGATGTTTTATC 58.468 45.455 0.00 0.00 0.00 1.75
724 767 3.055458 TCTGCCAGTCCGATGTTTTATCA 60.055 43.478 0.00 0.00 0.00 2.15
725 768 3.270027 TGCCAGTCCGATGTTTTATCAG 58.730 45.455 0.00 0.00 0.00 2.90
726 769 3.055458 TGCCAGTCCGATGTTTTATCAGA 60.055 43.478 0.00 0.00 0.00 3.27
727 770 3.309954 GCCAGTCCGATGTTTTATCAGAC 59.690 47.826 0.00 0.00 0.00 3.51
728 771 3.551890 CCAGTCCGATGTTTTATCAGACG 59.448 47.826 0.00 0.00 32.35 4.18
729 772 4.421058 CAGTCCGATGTTTTATCAGACGA 58.579 43.478 0.00 0.00 32.35 4.20
730 773 5.043903 CAGTCCGATGTTTTATCAGACGAT 58.956 41.667 0.00 0.00 32.35 3.73
731 774 5.043903 AGTCCGATGTTTTATCAGACGATG 58.956 41.667 0.00 0.00 32.35 3.84
732 775 4.804139 GTCCGATGTTTTATCAGACGATGT 59.196 41.667 0.00 0.00 32.73 3.06
733 776 5.975344 GTCCGATGTTTTATCAGACGATGTA 59.025 40.000 0.00 0.00 32.73 2.29
734 777 5.975344 TCCGATGTTTTATCAGACGATGTAC 59.025 40.000 0.00 0.00 32.73 2.90
735 778 5.977725 CCGATGTTTTATCAGACGATGTACT 59.022 40.000 0.00 0.00 32.73 2.73
736 779 6.475727 CCGATGTTTTATCAGACGATGTACTT 59.524 38.462 0.00 0.00 32.73 2.24
737 780 7.306051 CCGATGTTTTATCAGACGATGTACTTC 60.306 40.741 0.00 0.00 32.73 3.01
738 781 7.306051 CGATGTTTTATCAGACGATGTACTTCC 60.306 40.741 3.35 0.00 32.73 3.46
739 782 6.931838 TGTTTTATCAGACGATGTACTTCCT 58.068 36.000 3.35 0.00 32.73 3.36
740 783 7.033791 TGTTTTATCAGACGATGTACTTCCTC 58.966 38.462 3.35 2.14 32.73 3.71
741 784 5.769484 TTATCAGACGATGTACTTCCTCC 57.231 43.478 3.35 0.00 32.73 4.30
742 785 2.014857 TCAGACGATGTACTTCCTCCG 58.985 52.381 3.35 0.00 0.00 4.63
743 786 1.743958 CAGACGATGTACTTCCTCCGT 59.256 52.381 3.35 0.00 0.00 4.69
744 787 2.941064 CAGACGATGTACTTCCTCCGTA 59.059 50.000 3.35 0.00 0.00 4.02
745 788 3.376234 CAGACGATGTACTTCCTCCGTAA 59.624 47.826 3.35 0.00 0.00 3.18
746 789 4.012374 AGACGATGTACTTCCTCCGTAAA 58.988 43.478 3.35 0.00 0.00 2.01
747 790 4.101235 GACGATGTACTTCCTCCGTAAAC 58.899 47.826 3.35 0.00 0.00 2.01
748 791 3.760684 ACGATGTACTTCCTCCGTAAACT 59.239 43.478 3.35 0.00 0.00 2.66
749 792 4.943705 ACGATGTACTTCCTCCGTAAACTA 59.056 41.667 3.35 0.00 0.00 2.24
750 793 5.415701 ACGATGTACTTCCTCCGTAAACTAA 59.584 40.000 3.35 0.00 0.00 2.24
751 794 6.096001 ACGATGTACTTCCTCCGTAAACTAAT 59.904 38.462 3.35 0.00 0.00 1.73
752 795 7.283127 ACGATGTACTTCCTCCGTAAACTAATA 59.717 37.037 3.35 0.00 0.00 0.98
753 796 8.295288 CGATGTACTTCCTCCGTAAACTAATAT 58.705 37.037 3.35 0.00 0.00 1.28
759 802 8.358895 ACTTCCTCCGTAAACTAATATAAGAGC 58.641 37.037 0.00 0.00 0.00 4.09
760 803 7.828508 TCCTCCGTAAACTAATATAAGAGCA 57.171 36.000 0.00 0.00 0.00 4.26
761 804 8.418597 TCCTCCGTAAACTAATATAAGAGCAT 57.581 34.615 0.00 0.00 0.00 3.79
762 805 8.867097 TCCTCCGTAAACTAATATAAGAGCATT 58.133 33.333 0.00 0.00 0.00 3.56
763 806 9.490379 CCTCCGTAAACTAATATAAGAGCATTT 57.510 33.333 0.00 0.00 0.00 2.32
812 855 9.490379 AACGCTCTTATATTAATTTACAGAGGG 57.510 33.333 21.96 21.96 42.53 4.30
813 856 8.867097 ACGCTCTTATATTAATTTACAGAGGGA 58.133 33.333 25.54 1.67 40.49 4.20
814 857 9.360093 CGCTCTTATATTAATTTACAGAGGGAG 57.640 37.037 20.74 5.24 40.49 4.30
833 876 4.901868 GGAGTAACCCTGTTTACACATGA 58.098 43.478 0.00 0.00 34.83 3.07
834 877 5.310451 GGAGTAACCCTGTTTACACATGAA 58.690 41.667 0.00 0.00 34.83 2.57
835 878 5.944007 GGAGTAACCCTGTTTACACATGAAT 59.056 40.000 0.00 0.00 34.83 2.57
836 879 7.107542 GGAGTAACCCTGTTTACACATGAATA 58.892 38.462 0.00 0.00 34.83 1.75
837 880 7.773690 GGAGTAACCCTGTTTACACATGAATAT 59.226 37.037 0.00 0.00 34.83 1.28
838 881 9.826574 GAGTAACCCTGTTTACACATGAATATA 57.173 33.333 0.00 0.00 34.83 0.86
841 884 8.871629 AACCCTGTTTACACATGAATATAACA 57.128 30.769 0.00 2.67 30.39 2.41
842 885 8.871629 ACCCTGTTTACACATGAATATAACAA 57.128 30.769 0.00 0.00 30.39 2.83
843 886 9.303116 ACCCTGTTTACACATGAATATAACAAA 57.697 29.630 0.00 0.00 30.39 2.83
844 887 9.567848 CCCTGTTTACACATGAATATAACAAAC 57.432 33.333 0.00 0.00 30.39 2.93
845 888 9.567848 CCTGTTTACACATGAATATAACAAACC 57.432 33.333 0.00 0.00 30.39 3.27
846 889 9.272901 CTGTTTACACATGAATATAACAAACCG 57.727 33.333 0.00 0.00 30.39 4.44
847 890 7.751348 TGTTTACACATGAATATAACAAACCGC 59.249 33.333 0.00 0.00 0.00 5.68
848 891 5.243426 ACACATGAATATAACAAACCGCC 57.757 39.130 0.00 0.00 0.00 6.13
849 892 4.702612 ACACATGAATATAACAAACCGCCA 59.297 37.500 0.00 0.00 0.00 5.69
850 893 5.034152 CACATGAATATAACAAACCGCCAC 58.966 41.667 0.00 0.00 0.00 5.01
851 894 4.201871 ACATGAATATAACAAACCGCCACG 60.202 41.667 0.00 0.00 0.00 4.94
852 895 3.597255 TGAATATAACAAACCGCCACGA 58.403 40.909 0.00 0.00 0.00 4.35
853 896 4.193090 TGAATATAACAAACCGCCACGAT 58.807 39.130 0.00 0.00 0.00 3.73
854 897 4.034626 TGAATATAACAAACCGCCACGATG 59.965 41.667 0.00 0.00 0.00 3.84
855 898 1.091537 ATAACAAACCGCCACGATGG 58.908 50.000 0.00 0.00 41.55 3.51
864 907 4.664062 CCACGATGGCATTTCCCT 57.336 55.556 0.00 0.00 0.00 4.20
865 908 3.798794 CCACGATGGCATTTCCCTA 57.201 52.632 0.00 0.00 0.00 3.53
866 909 1.597742 CCACGATGGCATTTCCCTAG 58.402 55.000 0.00 0.00 0.00 3.02
867 910 1.140852 CCACGATGGCATTTCCCTAGA 59.859 52.381 0.00 0.00 0.00 2.43
868 911 2.421388 CCACGATGGCATTTCCCTAGAA 60.421 50.000 0.00 0.00 0.00 2.10
869 912 3.278574 CACGATGGCATTTCCCTAGAAA 58.721 45.455 0.00 0.00 45.78 2.52
870 913 3.313526 CACGATGGCATTTCCCTAGAAAG 59.686 47.826 0.00 0.00 44.96 2.62
871 914 3.199946 ACGATGGCATTTCCCTAGAAAGA 59.800 43.478 0.00 0.00 44.96 2.52
872 915 4.199310 CGATGGCATTTCCCTAGAAAGAA 58.801 43.478 0.00 0.00 44.96 2.52
873 916 4.640201 CGATGGCATTTCCCTAGAAAGAAA 59.360 41.667 0.00 0.00 44.96 2.52
874 917 5.125417 CGATGGCATTTCCCTAGAAAGAAAA 59.875 40.000 0.00 0.00 44.96 2.29
875 918 6.350110 CGATGGCATTTCCCTAGAAAGAAAAA 60.350 38.462 0.00 0.00 44.96 1.94
898 941 8.776376 AAAAACACATGTGAATTTTTCTGAGT 57.224 26.923 31.94 9.94 33.19 3.41
899 942 9.868277 AAAAACACATGTGAATTTTTCTGAGTA 57.132 25.926 31.94 0.00 33.19 2.59
900 943 9.520204 AAAACACATGTGAATTTTTCTGAGTAG 57.480 29.630 31.94 0.00 0.00 2.57
901 944 8.450578 AACACATGTGAATTTTTCTGAGTAGA 57.549 30.769 31.94 0.00 0.00 2.59
902 945 8.092521 ACACATGTGAATTTTTCTGAGTAGAG 57.907 34.615 31.94 0.00 33.70 2.43
903 946 7.173907 ACACATGTGAATTTTTCTGAGTAGAGG 59.826 37.037 31.94 0.00 33.70 3.69
904 947 6.656693 ACATGTGAATTTTTCTGAGTAGAGGG 59.343 38.462 0.00 0.00 33.70 4.30
905 948 5.003804 TGTGAATTTTTCTGAGTAGAGGGC 58.996 41.667 0.00 0.00 33.70 5.19
906 949 5.003804 GTGAATTTTTCTGAGTAGAGGGCA 58.996 41.667 0.00 0.00 33.70 5.36
907 950 5.473504 GTGAATTTTTCTGAGTAGAGGGCAA 59.526 40.000 0.00 0.00 33.70 4.52
908 951 6.016276 GTGAATTTTTCTGAGTAGAGGGCAAA 60.016 38.462 0.00 0.00 33.70 3.68
909 952 5.966742 ATTTTTCTGAGTAGAGGGCAAAC 57.033 39.130 0.00 0.00 33.70 2.93
910 953 2.743636 TTCTGAGTAGAGGGCAAACG 57.256 50.000 0.00 0.00 33.70 3.60
911 954 1.629043 TCTGAGTAGAGGGCAAACGT 58.371 50.000 0.00 0.00 0.00 3.99
912 955 1.272490 TCTGAGTAGAGGGCAAACGTG 59.728 52.381 0.00 0.00 0.00 4.49
913 956 5.963892 TTCTGAGTAGAGGGCAAACGTGC 62.964 52.174 0.00 0.00 41.27 5.34
926 969 4.472691 CAAACGTGCAGAGATTCAGAAA 57.527 40.909 0.00 0.00 0.00 2.52
927 970 4.214437 CAAACGTGCAGAGATTCAGAAAC 58.786 43.478 0.00 0.00 0.00 2.78
928 971 3.111853 ACGTGCAGAGATTCAGAAACA 57.888 42.857 0.00 0.00 0.00 2.83
929 972 3.466836 ACGTGCAGAGATTCAGAAACAA 58.533 40.909 0.00 0.00 0.00 2.83
930 973 3.248602 ACGTGCAGAGATTCAGAAACAAC 59.751 43.478 0.00 0.00 0.00 3.32
931 974 3.496130 CGTGCAGAGATTCAGAAACAACT 59.504 43.478 0.00 0.00 0.00 3.16
932 975 4.024556 CGTGCAGAGATTCAGAAACAACTT 60.025 41.667 0.00 0.00 0.00 2.66
933 976 5.447573 GTGCAGAGATTCAGAAACAACTTC 58.552 41.667 0.00 0.00 0.00 3.01
934 977 5.008019 GTGCAGAGATTCAGAAACAACTTCA 59.992 40.000 0.00 0.00 36.40 3.02
935 978 5.237996 TGCAGAGATTCAGAAACAACTTCAG 59.762 40.000 0.00 0.00 36.40 3.02
936 979 5.468072 GCAGAGATTCAGAAACAACTTCAGA 59.532 40.000 0.00 0.00 36.40 3.27
937 980 6.565623 GCAGAGATTCAGAAACAACTTCAGAC 60.566 42.308 0.00 0.00 36.40 3.51
938 981 5.694006 AGAGATTCAGAAACAACTTCAGACG 59.306 40.000 0.00 0.00 36.40 4.18
939 982 3.944422 TTCAGAAACAACTTCAGACGC 57.056 42.857 0.00 0.00 36.40 5.19
940 983 2.210116 TCAGAAACAACTTCAGACGCC 58.790 47.619 0.00 0.00 36.40 5.68
941 984 1.939934 CAGAAACAACTTCAGACGCCA 59.060 47.619 0.00 0.00 36.40 5.69
942 985 2.032549 CAGAAACAACTTCAGACGCCAG 60.033 50.000 0.00 0.00 36.40 4.85
943 986 2.158957 AGAAACAACTTCAGACGCCAGA 60.159 45.455 0.00 0.00 36.40 3.86
944 987 2.550830 AACAACTTCAGACGCCAGAT 57.449 45.000 0.00 0.00 0.00 2.90
945 988 3.678056 AACAACTTCAGACGCCAGATA 57.322 42.857 0.00 0.00 0.00 1.98
946 989 2.960819 ACAACTTCAGACGCCAGATAC 58.039 47.619 0.00 0.00 0.00 2.24
947 990 2.563179 ACAACTTCAGACGCCAGATACT 59.437 45.455 0.00 0.00 0.00 2.12
948 991 2.926200 CAACTTCAGACGCCAGATACTG 59.074 50.000 0.00 0.00 0.00 2.74
949 992 1.134965 ACTTCAGACGCCAGATACTGC 60.135 52.381 0.00 0.00 0.00 4.40
950 993 0.894835 TTCAGACGCCAGATACTGCA 59.105 50.000 0.00 0.00 0.00 4.41
951 994 0.457443 TCAGACGCCAGATACTGCAG 59.543 55.000 13.48 13.48 0.00 4.41
952 995 0.457443 CAGACGCCAGATACTGCAGA 59.543 55.000 23.35 4.31 0.00 4.26
953 996 1.134995 CAGACGCCAGATACTGCAGAA 60.135 52.381 23.35 0.00 0.00 3.02
954 997 1.550524 AGACGCCAGATACTGCAGAAA 59.449 47.619 23.35 8.48 0.00 2.52
955 998 2.169352 AGACGCCAGATACTGCAGAAAT 59.831 45.455 23.35 13.42 0.00 2.17
956 999 2.541762 GACGCCAGATACTGCAGAAATC 59.458 50.000 23.35 20.98 0.00 2.17
957 1000 1.524355 CGCCAGATACTGCAGAAATCG 59.476 52.381 23.35 16.39 0.00 3.34
958 1001 2.799562 CGCCAGATACTGCAGAAATCGA 60.800 50.000 23.35 0.00 0.00 3.59
959 1002 2.799412 GCCAGATACTGCAGAAATCGAG 59.201 50.000 23.35 17.74 0.00 4.04
960 1003 2.799412 CCAGATACTGCAGAAATCGAGC 59.201 50.000 23.35 0.77 0.00 5.03
961 1004 2.799412 CAGATACTGCAGAAATCGAGCC 59.201 50.000 23.35 1.43 0.00 4.70
962 1005 1.789464 GATACTGCAGAAATCGAGCCG 59.211 52.381 23.35 0.00 0.00 5.52
963 1006 0.530744 TACTGCAGAAATCGAGCCGT 59.469 50.000 23.35 0.00 0.00 5.68
964 1007 0.320771 ACTGCAGAAATCGAGCCGTT 60.321 50.000 23.35 0.00 0.00 4.44
965 1008 0.095935 CTGCAGAAATCGAGCCGTTG 59.904 55.000 8.42 0.00 0.00 4.10
966 1009 1.226128 GCAGAAATCGAGCCGTTGC 60.226 57.895 0.00 0.00 37.95 4.17
967 1010 1.425428 CAGAAATCGAGCCGTTGCC 59.575 57.895 0.00 0.00 38.69 4.52
968 1011 1.003839 AGAAATCGAGCCGTTGCCA 60.004 52.632 0.00 0.00 38.69 4.92
969 1012 1.134694 GAAATCGAGCCGTTGCCAC 59.865 57.895 0.00 0.00 38.69 5.01
970 1013 1.298859 GAAATCGAGCCGTTGCCACT 61.299 55.000 0.00 0.00 38.69 4.00
971 1014 1.298859 AAATCGAGCCGTTGCCACTC 61.299 55.000 0.00 0.00 38.69 3.51
972 1015 2.172483 AATCGAGCCGTTGCCACTCT 62.172 55.000 0.00 0.00 38.69 3.24
973 1016 1.320344 ATCGAGCCGTTGCCACTCTA 61.320 55.000 0.00 0.00 38.69 2.43
974 1017 1.805945 CGAGCCGTTGCCACTCTAC 60.806 63.158 0.00 0.00 38.69 2.59
975 1018 1.448013 GAGCCGTTGCCACTCTACC 60.448 63.158 0.00 0.00 38.69 3.18
976 1019 1.889530 GAGCCGTTGCCACTCTACCT 61.890 60.000 0.00 0.00 38.69 3.08
977 1020 0.613853 AGCCGTTGCCACTCTACCTA 60.614 55.000 0.00 0.00 38.69 3.08
978 1021 0.459759 GCCGTTGCCACTCTACCTAC 60.460 60.000 0.00 0.00 0.00 3.18
979 1022 1.183549 CCGTTGCCACTCTACCTACT 58.816 55.000 0.00 0.00 0.00 2.57
980 1023 1.549170 CCGTTGCCACTCTACCTACTT 59.451 52.381 0.00 0.00 0.00 2.24
981 1024 2.028385 CCGTTGCCACTCTACCTACTTT 60.028 50.000 0.00 0.00 0.00 2.66
982 1025 3.556423 CCGTTGCCACTCTACCTACTTTT 60.556 47.826 0.00 0.00 0.00 2.27
983 1026 3.678548 CGTTGCCACTCTACCTACTTTTC 59.321 47.826 0.00 0.00 0.00 2.29
984 1027 4.560919 CGTTGCCACTCTACCTACTTTTCT 60.561 45.833 0.00 0.00 0.00 2.52
985 1028 4.803098 TGCCACTCTACCTACTTTTCTC 57.197 45.455 0.00 0.00 0.00 2.87
986 1029 3.514309 TGCCACTCTACCTACTTTTCTCC 59.486 47.826 0.00 0.00 0.00 3.71
987 1030 3.118702 GCCACTCTACCTACTTTTCTCCC 60.119 52.174 0.00 0.00 0.00 4.30
988 1031 3.130693 CCACTCTACCTACTTTTCTCCCG 59.869 52.174 0.00 0.00 0.00 5.14
989 1032 3.762823 CACTCTACCTACTTTTCTCCCGT 59.237 47.826 0.00 0.00 0.00 5.28
990 1033 4.015764 ACTCTACCTACTTTTCTCCCGTC 58.984 47.826 0.00 0.00 0.00 4.79
991 1034 3.012518 TCTACCTACTTTTCTCCCGTCG 58.987 50.000 0.00 0.00 0.00 5.12
992 1035 0.245813 ACCTACTTTTCTCCCGTCGC 59.754 55.000 0.00 0.00 0.00 5.19
993 1036 0.245539 CCTACTTTTCTCCCGTCGCA 59.754 55.000 0.00 0.00 0.00 5.10
994 1037 1.337447 CCTACTTTTCTCCCGTCGCAA 60.337 52.381 0.00 0.00 0.00 4.85
995 1038 1.725164 CTACTTTTCTCCCGTCGCAAC 59.275 52.381 0.00 0.00 0.00 4.17
996 1039 0.179067 ACTTTTCTCCCGTCGCAACA 60.179 50.000 0.00 0.00 0.00 3.33
997 1040 1.156736 CTTTTCTCCCGTCGCAACAT 58.843 50.000 0.00 0.00 0.00 2.71
998 1041 1.535462 CTTTTCTCCCGTCGCAACATT 59.465 47.619 0.00 0.00 0.00 2.71
999 1042 1.153353 TTTCTCCCGTCGCAACATTC 58.847 50.000 0.00 0.00 0.00 2.67
1000 1043 1.011968 TTCTCCCGTCGCAACATTCG 61.012 55.000 0.00 0.00 0.00 3.34
1001 1044 1.445410 CTCCCGTCGCAACATTCGA 60.445 57.895 0.00 0.00 0.00 3.71
1002 1045 1.005984 TCCCGTCGCAACATTCGAA 60.006 52.632 0.00 0.00 37.73 3.71
1003 1046 0.600518 TCCCGTCGCAACATTCGAAA 60.601 50.000 0.00 0.00 37.73 3.46
1004 1047 0.236187 CCCGTCGCAACATTCGAAAA 59.764 50.000 0.00 0.00 37.73 2.29
1005 1048 1.334239 CCCGTCGCAACATTCGAAAAA 60.334 47.619 0.00 0.00 37.73 1.94
1057 1100 3.508840 CATGTCCCGCGCCTTTCC 61.509 66.667 0.00 0.00 0.00 3.13
1110 1156 3.041940 CGCTCCACGCCGTCTTTT 61.042 61.111 0.00 0.00 34.21 2.27
1111 1157 2.861006 GCTCCACGCCGTCTTTTC 59.139 61.111 0.00 0.00 0.00 2.29
1148 1194 4.520846 GCAAACCGCGCCGATCAG 62.521 66.667 0.00 0.00 0.00 2.90
1149 1195 3.118454 CAAACCGCGCCGATCAGT 61.118 61.111 0.00 0.00 0.00 3.41
1150 1196 1.807981 CAAACCGCGCCGATCAGTA 60.808 57.895 0.00 0.00 0.00 2.74
1151 1197 1.143183 AAACCGCGCCGATCAGTAT 59.857 52.632 0.00 0.00 0.00 2.12
1152 1198 0.874607 AAACCGCGCCGATCAGTATC 60.875 55.000 0.00 0.00 0.00 2.24
1153 1199 2.430921 CCGCGCCGATCAGTATCC 60.431 66.667 0.00 0.00 0.00 2.59
1154 1200 2.335011 CGCGCCGATCAGTATCCA 59.665 61.111 0.00 0.00 0.00 3.41
1155 1201 2.016704 CGCGCCGATCAGTATCCAC 61.017 63.158 0.00 0.00 0.00 4.02
1156 1202 2.016704 GCGCCGATCAGTATCCACG 61.017 63.158 0.00 0.00 32.72 4.94
1157 1203 1.652563 CGCCGATCAGTATCCACGA 59.347 57.895 0.00 0.00 31.75 4.35
1198 1244 4.082523 CACCGCCGATGACCAGGT 62.083 66.667 0.00 0.00 35.24 4.00
1199 1245 3.771160 ACCGCCGATGACCAGGTC 61.771 66.667 13.35 13.35 0.00 3.85
1267 1313 3.461773 CACGATCGGCCTCCACCT 61.462 66.667 20.98 0.00 0.00 4.00
1268 1314 3.461773 ACGATCGGCCTCCACCTG 61.462 66.667 20.98 0.00 0.00 4.00
1269 1315 3.147595 CGATCGGCCTCCACCTGA 61.148 66.667 7.38 0.00 0.00 3.86
1270 1316 2.818132 GATCGGCCTCCACCTGAG 59.182 66.667 0.00 0.00 41.07 3.35
1277 1323 3.775654 CTCCACCTGAGGTCCCGC 61.776 72.222 0.00 0.00 37.45 6.13
1334 1380 4.157120 CCCCATCCGGACACCGTC 62.157 72.222 6.12 0.00 46.80 4.79
1336 1382 2.125673 CCATCCGGACACCGTCAC 60.126 66.667 6.12 0.00 46.80 3.67
1751 1797 1.737008 GAAAGTGGACGAGGCGGTC 60.737 63.158 0.00 3.53 36.18 4.79
1774 1820 2.107141 GTTCGAGAGGATGCCGGG 59.893 66.667 2.18 0.00 0.00 5.73
1919 1965 1.128692 GTCACTGCTTATGCCAACGAC 59.871 52.381 0.00 0.00 38.71 4.34
1931 1977 0.744414 CCAACGACGGCCAGATGAAT 60.744 55.000 2.24 0.00 0.00 2.57
1943 1989 2.435069 CCAGATGAATGAGGCTCAGAGT 59.565 50.000 23.24 10.48 0.00 3.24
1955 2001 4.464008 AGGCTCAGAGTTTGTTTGATTCA 58.536 39.130 0.00 0.00 0.00 2.57
2352 2398 0.800631 CTTTGCTCAGATGCTGCGAA 59.199 50.000 0.00 0.00 0.00 4.70
2384 5841 1.734477 CAGCTCGACCACCTTCACG 60.734 63.158 0.00 0.00 0.00 4.35
2451 5908 2.480073 CGGGCAATCTTCGCATCAATTT 60.480 45.455 0.00 0.00 0.00 1.82
2452 5909 3.118542 GGGCAATCTTCGCATCAATTTC 58.881 45.455 0.00 0.00 0.00 2.17
2454 5911 3.181483 GGCAATCTTCGCATCAATTTCCT 60.181 43.478 0.00 0.00 0.00 3.36
2468 5928 1.537814 TTTCCTGCTACGGGCTCGAA 61.538 55.000 15.95 0.00 42.39 3.71
2469 5929 1.945354 TTCCTGCTACGGGCTCGAAG 61.945 60.000 15.95 4.21 42.39 3.79
2570 6030 1.965643 ACCATGCCATTGGATATGCAC 59.034 47.619 6.95 0.00 39.25 4.57
2780 6240 0.548510 AGGCTATGAAGGGGAGCAAC 59.451 55.000 0.00 0.00 37.98 4.17
2929 6390 4.039004 CCAGATGATGAAGAAGGATCGACT 59.961 45.833 0.00 0.00 0.00 4.18
2982 6445 3.991999 GCTTGCACCAGCTGATCA 58.008 55.556 17.39 6.86 42.74 2.92
3037 6502 9.852091 GATCTCTTTGATGAACAAGCTTATTTT 57.148 29.630 0.00 0.00 39.77 1.82
3045 6510 7.967854 TGATGAACAAGCTTATTTTATTCCACG 59.032 33.333 0.00 0.00 0.00 4.94
3046 6511 7.441890 TGAACAAGCTTATTTTATTCCACGA 57.558 32.000 0.00 0.00 0.00 4.35
3065 6530 3.119673 ACGAACAATGCTTTGACACACAA 60.120 39.130 18.35 0.00 36.64 3.33
3187 6897 1.078848 CTAGAGCCCTGTGTGCACC 60.079 63.158 15.69 6.37 0.00 5.01
3209 6927 1.353091 ACTCCTGAACTCCTGAACCC 58.647 55.000 0.00 0.00 0.00 4.11
3212 6930 0.326264 CCTGAACTCCTGAACCCCAG 59.674 60.000 0.00 0.00 42.55 4.45
3238 6956 3.405831 TCTGGAGCTGTGTTTCAGAATG 58.594 45.455 0.00 0.00 46.27 2.67
3267 7001 5.046304 GGTGCTGATATATACACCCATCAGT 60.046 44.000 16.17 0.00 45.56 3.41
3268 7002 5.871524 GTGCTGATATATACACCCATCAGTG 59.128 44.000 10.96 0.00 44.04 3.66
3282 7016 3.594134 CATCAGTGTCCTCTTCTTGTCC 58.406 50.000 0.00 0.00 0.00 4.02
3283 7017 2.677914 TCAGTGTCCTCTTCTTGTCCA 58.322 47.619 0.00 0.00 0.00 4.02
3284 7018 3.242867 TCAGTGTCCTCTTCTTGTCCAT 58.757 45.455 0.00 0.00 0.00 3.41
3285 7019 3.648067 TCAGTGTCCTCTTCTTGTCCATT 59.352 43.478 0.00 0.00 0.00 3.16
3309 7050 0.467844 AGGCATGTTTGGTGCTGTCA 60.468 50.000 0.00 0.00 42.16 3.58
3310 7051 0.388659 GGCATGTTTGGTGCTGTCAA 59.611 50.000 0.00 0.00 42.16 3.18
3312 7053 2.063266 GCATGTTTGGTGCTGTCAATG 58.937 47.619 0.00 0.00 39.45 2.82
3313 7054 2.063266 CATGTTTGGTGCTGTCAATGC 58.937 47.619 0.00 0.00 0.00 3.56
3315 7056 1.337703 TGTTTGGTGCTGTCAATGCTC 59.662 47.619 0.00 0.00 0.00 4.26
3316 7057 1.610522 GTTTGGTGCTGTCAATGCTCT 59.389 47.619 0.00 0.00 0.00 4.09
3319 7060 0.524862 GGTGCTGTCAATGCTCTTGG 59.475 55.000 0.70 0.00 0.00 3.61
3320 7061 1.242076 GTGCTGTCAATGCTCTTGGT 58.758 50.000 0.70 0.00 0.00 3.67
3321 7062 1.068748 GTGCTGTCAATGCTCTTGGTG 60.069 52.381 0.70 0.00 0.00 4.17
3322 7063 0.524862 GCTGTCAATGCTCTTGGTGG 59.475 55.000 0.70 0.00 0.00 4.61
3323 7064 1.883638 GCTGTCAATGCTCTTGGTGGA 60.884 52.381 0.70 0.00 0.00 4.02
3331 7072 2.061220 CTCTTGGTGGAGGTGCTGA 58.939 57.895 0.00 0.00 0.00 4.26
3360 7101 2.564062 ACTGGGATTTGTTGGCAATCAG 59.436 45.455 1.92 5.88 34.18 2.90
3362 7103 2.971330 TGGGATTTGTTGGCAATCAGTT 59.029 40.909 1.92 0.00 34.18 3.16
3363 7104 3.244146 TGGGATTTGTTGGCAATCAGTTG 60.244 43.478 1.92 0.00 38.39 3.16
3376 7117 6.541278 TGGCAATCAGTTGATTCAGAGATAAG 59.459 38.462 4.43 0.00 42.41 1.73
3476 7224 4.847633 ACATTTGTGATCTGTTGTTCACG 58.152 39.130 0.00 0.00 42.66 4.35
3479 7227 1.414550 TGTGATCTGTTGTTCACGGGA 59.585 47.619 0.00 0.00 42.66 5.14
3485 7233 3.202906 TCTGTTGTTCACGGGAAGAAAG 58.797 45.455 12.05 11.36 37.94 2.62
3487 7235 2.092861 TGTTGTTCACGGGAAGAAAGGA 60.093 45.455 12.05 0.00 37.94 3.36
3489 7237 1.071699 TGTTCACGGGAAGAAAGGAGG 59.928 52.381 0.00 0.00 32.62 4.30
3492 7240 0.391793 CACGGGAAGAAAGGAGGAGC 60.392 60.000 0.00 0.00 0.00 4.70
3493 7241 0.836400 ACGGGAAGAAAGGAGGAGCA 60.836 55.000 0.00 0.00 0.00 4.26
3494 7242 0.324943 CGGGAAGAAAGGAGGAGCAA 59.675 55.000 0.00 0.00 0.00 3.91
3499 7308 3.008485 GGAAGAAAGGAGGAGCAAGAAGA 59.992 47.826 0.00 0.00 0.00 2.87
3500 7309 3.694043 AGAAAGGAGGAGCAAGAAGAC 57.306 47.619 0.00 0.00 0.00 3.01
3505 7314 2.765699 AGGAGGAGCAAGAAGACATCTC 59.234 50.000 0.00 0.00 37.42 2.75
3549 7360 1.394917 CGAACCTGCATGTGTAGAAGC 59.605 52.381 0.00 0.00 0.00 3.86
3565 7376 3.275088 GCTGCTGCTGCTGTTCAT 58.725 55.556 22.10 0.00 39.81 2.57
3567 7378 0.806868 GCTGCTGCTGCTGTTCATTA 59.193 50.000 22.10 0.00 39.81 1.90
3568 7379 1.467035 GCTGCTGCTGCTGTTCATTAC 60.467 52.381 22.10 2.21 39.81 1.89
3569 7380 1.131883 CTGCTGCTGCTGTTCATTACC 59.868 52.381 17.00 0.00 40.48 2.85
3570 7381 0.097674 GCTGCTGCTGTTCATTACCG 59.902 55.000 8.53 0.00 36.03 4.02
3577 7412 1.729149 GCTGTTCATTACCGCAAGTGC 60.729 52.381 0.00 0.00 37.00 4.40
3725 7574 1.973816 ATCTCAGAGCCAGGCAGCTG 61.974 60.000 22.30 22.30 45.15 4.24
3729 7578 1.303155 AGAGCCAGGCAGCTGTTTC 60.303 57.895 15.80 5.68 45.15 2.78
3731 7580 1.303155 AGCCAGGCAGCTGTTTCTC 60.303 57.895 15.80 2.52 42.95 2.87
3748 7686 9.387123 GCTGTTTCTCTACAAAGAAATGTAAAG 57.613 33.333 2.72 0.00 44.64 1.85
3786 7724 0.247460 GCCCCAAAGAAGATGTTGCC 59.753 55.000 0.00 0.00 0.00 4.52
3997 8195 0.874390 TGCTGCAATTTCCTGTCGAC 59.126 50.000 9.11 9.11 0.00 4.20
3999 8197 1.537202 GCTGCAATTTCCTGTCGACTT 59.463 47.619 17.92 0.00 0.00 3.01
4033 8232 0.611896 CCCCGAAATGAGGCAAGGTT 60.612 55.000 0.00 0.00 0.00 3.50
4049 8647 4.567971 CAAGGTTATGCCAATTTCTTGCA 58.432 39.130 0.00 0.00 40.61 4.08
4066 8676 1.207570 TGCAGCCAAAATAGCAATGGG 59.792 47.619 0.00 0.00 34.71 4.00
4075 8685 5.829924 CCAAAATAGCAATGGGATCACTAGT 59.170 40.000 0.00 0.00 0.00 2.57
4076 8686 6.998074 CCAAAATAGCAATGGGATCACTAGTA 59.002 38.462 0.00 0.00 0.00 1.82
4077 8687 7.041098 CCAAAATAGCAATGGGATCACTAGTAC 60.041 40.741 0.00 0.00 0.00 2.73
4115 8725 7.719633 GTGTGATAATAACATCAGGGTGGTAAT 59.280 37.037 0.00 0.00 35.63 1.89
4117 8727 8.567948 GTGATAATAACATCAGGGTGGTAATTG 58.432 37.037 0.00 0.00 35.63 2.32
4118 8728 7.723616 TGATAATAACATCAGGGTGGTAATTGG 59.276 37.037 0.00 0.00 31.34 3.16
4120 8730 4.938575 AACATCAGGGTGGTAATTGGTA 57.061 40.909 0.00 0.00 0.00 3.25
4121 8731 4.938575 ACATCAGGGTGGTAATTGGTAA 57.061 40.909 0.00 0.00 0.00 2.85
4122 8732 5.263872 ACATCAGGGTGGTAATTGGTAAA 57.736 39.130 0.00 0.00 0.00 2.01
4123 8733 5.837829 ACATCAGGGTGGTAATTGGTAAAT 58.162 37.500 0.00 0.00 0.00 1.40
4126 8736 7.340999 ACATCAGGGTGGTAATTGGTAAATAAC 59.659 37.037 0.00 0.00 0.00 1.89
4128 8738 7.415086 TCAGGGTGGTAATTGGTAAATAACAT 58.585 34.615 0.00 0.00 0.00 2.71
4129 8739 7.340743 TCAGGGTGGTAATTGGTAAATAACATG 59.659 37.037 0.00 0.00 0.00 3.21
4130 8740 7.123547 CAGGGTGGTAATTGGTAAATAACATGT 59.876 37.037 0.00 0.00 0.00 3.21
4132 8742 8.407832 GGGTGGTAATTGGTAAATAACATGTAC 58.592 37.037 0.00 0.00 0.00 2.90
4133 8743 9.181061 GGTGGTAATTGGTAAATAACATGTACT 57.819 33.333 0.00 0.00 0.00 2.73
4134 8744 9.997482 GTGGTAATTGGTAAATAACATGTACTG 57.003 33.333 0.00 0.00 0.00 2.74
4135 8745 9.742144 TGGTAATTGGTAAATAACATGTACTGT 57.258 29.630 0.00 0.00 40.84 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 71 0.520404 CACTGAAGGCACATGCTGAC 59.480 55.000 3.48 0.00 41.70 3.51
102 106 5.362263 ACTGCGTGTACTCTTTTTAAAGGA 58.638 37.500 2.63 0.00 36.67 3.36
247 273 0.455815 TGATACGAGCGTGCAGTGAT 59.544 50.000 5.69 0.00 0.00 3.06
496 539 9.086336 TTTTGAGCTAAAATGACACTTGAAAAG 57.914 29.630 0.00 0.00 40.59 2.27
497 540 8.994429 TTTTGAGCTAAAATGACACTTGAAAA 57.006 26.923 0.00 0.00 33.48 2.29
510 553 9.723601 ATTTTATGCCTTCATTTTGAGCTAAAA 57.276 25.926 0.00 0.00 42.10 1.52
511 554 9.723601 AATTTTATGCCTTCATTTTGAGCTAAA 57.276 25.926 0.00 0.00 34.22 1.85
512 555 9.723601 AAATTTTATGCCTTCATTTTGAGCTAA 57.276 25.926 0.00 0.00 34.22 3.09
514 557 9.723601 TTAAATTTTATGCCTTCATTTTGAGCT 57.276 25.926 0.00 0.00 34.22 4.09
520 563 9.705290 ACGAGTTTAAATTTTATGCCTTCATTT 57.295 25.926 0.00 0.00 34.22 2.32
521 564 9.705290 AACGAGTTTAAATTTTATGCCTTCATT 57.295 25.926 0.00 0.00 34.22 2.57
522 565 9.139174 CAACGAGTTTAAATTTTATGCCTTCAT 57.861 29.630 0.00 0.00 36.73 2.57
523 566 8.138712 ACAACGAGTTTAAATTTTATGCCTTCA 58.861 29.630 0.00 0.00 0.00 3.02
524 567 8.515473 ACAACGAGTTTAAATTTTATGCCTTC 57.485 30.769 0.00 0.00 0.00 3.46
525 568 8.880878 AACAACGAGTTTAAATTTTATGCCTT 57.119 26.923 0.00 0.00 37.03 4.35
526 569 9.620660 CTAACAACGAGTTTAAATTTTATGCCT 57.379 29.630 0.00 0.00 41.64 4.75
527 570 9.615295 TCTAACAACGAGTTTAAATTTTATGCC 57.385 29.630 0.00 0.00 41.64 4.40
536 579 9.985730 TCTTTCCTATCTAACAACGAGTTTAAA 57.014 29.630 3.60 0.00 41.64 1.52
537 580 9.985730 TTCTTTCCTATCTAACAACGAGTTTAA 57.014 29.630 3.60 0.00 41.64 1.52
538 581 9.985730 TTTCTTTCCTATCTAACAACGAGTTTA 57.014 29.630 3.60 0.00 41.64 2.01
539 582 8.897872 TTTCTTTCCTATCTAACAACGAGTTT 57.102 30.769 3.60 0.00 41.64 2.66
540 583 9.503399 AATTTCTTTCCTATCTAACAACGAGTT 57.497 29.630 0.00 0.00 44.27 3.01
561 604 9.971922 CCCTATTTGACATCCAGAAATAATTTC 57.028 33.333 0.00 0.00 39.96 2.17
562 605 8.424133 GCCCTATTTGACATCCAGAAATAATTT 58.576 33.333 0.00 0.00 0.00 1.82
563 606 7.564660 TGCCCTATTTGACATCCAGAAATAATT 59.435 33.333 0.00 0.00 0.00 1.40
564 607 7.068702 TGCCCTATTTGACATCCAGAAATAAT 58.931 34.615 0.00 0.00 0.00 1.28
565 608 6.430864 TGCCCTATTTGACATCCAGAAATAA 58.569 36.000 0.00 0.00 0.00 1.40
566 609 6.012337 TGCCCTATTTGACATCCAGAAATA 57.988 37.500 0.00 0.00 0.00 1.40
567 610 4.870636 TGCCCTATTTGACATCCAGAAAT 58.129 39.130 0.00 0.00 0.00 2.17
568 611 4.314522 TGCCCTATTTGACATCCAGAAA 57.685 40.909 0.00 0.00 0.00 2.52
569 612 4.524802 ATGCCCTATTTGACATCCAGAA 57.475 40.909 0.00 0.00 0.00 3.02
570 613 5.645056 TTATGCCCTATTTGACATCCAGA 57.355 39.130 0.00 0.00 0.00 3.86
571 614 6.713762 TTTTATGCCCTATTTGACATCCAG 57.286 37.500 0.00 0.00 0.00 3.86
572 615 7.673641 AATTTTATGCCCTATTTGACATCCA 57.326 32.000 0.00 0.00 0.00 3.41
573 616 9.696917 CTAAATTTTATGCCCTATTTGACATCC 57.303 33.333 0.00 0.00 0.00 3.51
574 617 9.696917 CCTAAATTTTATGCCCTATTTGACATC 57.303 33.333 0.00 0.00 0.00 3.06
575 618 8.150296 GCCTAAATTTTATGCCCTATTTGACAT 58.850 33.333 0.00 0.00 0.00 3.06
576 619 7.124901 TGCCTAAATTTTATGCCCTATTTGACA 59.875 33.333 12.12 0.00 0.00 3.58
577 620 7.438160 GTGCCTAAATTTTATGCCCTATTTGAC 59.562 37.037 12.12 0.86 0.00 3.18
578 621 7.496747 GTGCCTAAATTTTATGCCCTATTTGA 58.503 34.615 12.12 0.00 0.00 2.69
579 622 6.420604 CGTGCCTAAATTTTATGCCCTATTTG 59.579 38.462 12.12 0.00 0.00 2.32
580 623 6.462347 CCGTGCCTAAATTTTATGCCCTATTT 60.462 38.462 12.12 0.00 0.00 1.40
581 624 5.010617 CCGTGCCTAAATTTTATGCCCTATT 59.989 40.000 12.12 0.00 0.00 1.73
582 625 4.522789 CCGTGCCTAAATTTTATGCCCTAT 59.477 41.667 12.12 0.00 0.00 2.57
583 626 3.886505 CCGTGCCTAAATTTTATGCCCTA 59.113 43.478 12.12 0.00 0.00 3.53
584 627 2.693074 CCGTGCCTAAATTTTATGCCCT 59.307 45.455 12.12 0.00 0.00 5.19
585 628 2.429250 ACCGTGCCTAAATTTTATGCCC 59.571 45.455 12.12 2.47 0.00 5.36
586 629 3.119280 ACACCGTGCCTAAATTTTATGCC 60.119 43.478 12.12 5.07 0.00 4.40
587 630 4.104696 ACACCGTGCCTAAATTTTATGC 57.895 40.909 8.86 8.86 0.00 3.14
588 631 8.696410 ATTTAACACCGTGCCTAAATTTTATG 57.304 30.769 11.05 0.00 0.00 1.90
590 633 9.843334 CTTATTTAACACCGTGCCTAAATTTTA 57.157 29.630 17.77 4.95 0.00 1.52
591 634 7.815549 CCTTATTTAACACCGTGCCTAAATTTT 59.184 33.333 17.77 4.94 0.00 1.82
592 635 7.177041 TCCTTATTTAACACCGTGCCTAAATTT 59.823 33.333 17.77 0.00 0.00 1.82
593 636 6.660094 TCCTTATTTAACACCGTGCCTAAATT 59.340 34.615 17.77 1.33 0.00 1.82
594 637 6.181908 TCCTTATTTAACACCGTGCCTAAAT 58.818 36.000 17.14 17.14 0.00 1.40
595 638 5.558818 TCCTTATTTAACACCGTGCCTAAA 58.441 37.500 0.00 3.91 0.00 1.85
596 639 5.163281 TCCTTATTTAACACCGTGCCTAA 57.837 39.130 0.00 0.00 0.00 2.69
597 640 4.822685 TCCTTATTTAACACCGTGCCTA 57.177 40.909 0.00 0.00 0.00 3.93
598 641 3.706600 TCCTTATTTAACACCGTGCCT 57.293 42.857 0.00 0.00 0.00 4.75
599 642 4.976224 ATTCCTTATTTAACACCGTGCC 57.024 40.909 0.00 0.00 0.00 5.01
600 643 6.093633 AGAGAATTCCTTATTTAACACCGTGC 59.906 38.462 0.65 0.00 0.00 5.34
601 644 7.333423 TGAGAGAATTCCTTATTTAACACCGTG 59.667 37.037 0.65 0.00 0.00 4.94
602 645 7.391620 TGAGAGAATTCCTTATTTAACACCGT 58.608 34.615 0.65 0.00 0.00 4.83
603 646 7.843490 TGAGAGAATTCCTTATTTAACACCG 57.157 36.000 0.65 0.00 0.00 4.94
612 655 9.917887 ACATTCAAGATTGAGAGAATTCCTTAT 57.082 29.630 0.65 0.00 38.61 1.73
613 656 9.388506 GACATTCAAGATTGAGAGAATTCCTTA 57.611 33.333 0.65 0.00 38.61 2.69
614 657 7.338957 GGACATTCAAGATTGAGAGAATTCCTT 59.661 37.037 0.65 0.00 38.61 3.36
615 658 6.827762 GGACATTCAAGATTGAGAGAATTCCT 59.172 38.462 0.65 0.00 38.61 3.36
616 659 6.827762 AGGACATTCAAGATTGAGAGAATTCC 59.172 38.462 0.65 0.00 38.61 3.01
617 660 7.862512 AGGACATTCAAGATTGAGAGAATTC 57.137 36.000 0.00 0.00 38.61 2.17
618 661 7.992033 CCTAGGACATTCAAGATTGAGAGAATT 59.008 37.037 1.05 0.00 38.61 2.17
619 662 7.346698 TCCTAGGACATTCAAGATTGAGAGAAT 59.653 37.037 7.62 0.00 38.61 2.40
620 663 6.669591 TCCTAGGACATTCAAGATTGAGAGAA 59.330 38.462 7.62 0.00 38.61 2.87
621 664 6.197903 TCCTAGGACATTCAAGATTGAGAGA 58.802 40.000 7.62 0.00 38.61 3.10
622 665 6.477053 TCCTAGGACATTCAAGATTGAGAG 57.523 41.667 7.62 0.00 38.61 3.20
623 666 6.631314 GCTTCCTAGGACATTCAAGATTGAGA 60.631 42.308 12.22 0.00 38.61 3.27
624 667 5.526846 GCTTCCTAGGACATTCAAGATTGAG 59.473 44.000 12.22 2.25 38.61 3.02
625 668 5.431765 GCTTCCTAGGACATTCAAGATTGA 58.568 41.667 12.22 0.00 34.92 2.57
626 669 4.578105 GGCTTCCTAGGACATTCAAGATTG 59.422 45.833 12.22 0.00 0.00 2.67
627 670 4.228210 TGGCTTCCTAGGACATTCAAGATT 59.772 41.667 12.22 0.00 0.00 2.40
628 671 3.782523 TGGCTTCCTAGGACATTCAAGAT 59.217 43.478 12.22 0.00 0.00 2.40
629 672 3.181329 TGGCTTCCTAGGACATTCAAGA 58.819 45.455 12.22 0.00 0.00 3.02
630 673 3.634397 TGGCTTCCTAGGACATTCAAG 57.366 47.619 12.22 6.23 0.00 3.02
631 674 4.591321 ATTGGCTTCCTAGGACATTCAA 57.409 40.909 12.22 13.71 0.00 2.69
632 675 5.456619 CCATATTGGCTTCCTAGGACATTCA 60.457 44.000 12.22 5.10 0.00 2.57
633 676 5.006386 CCATATTGGCTTCCTAGGACATTC 58.994 45.833 12.22 2.32 0.00 2.67
634 677 4.990526 CCATATTGGCTTCCTAGGACATT 58.009 43.478 12.22 5.79 0.00 2.71
635 678 4.647564 CCATATTGGCTTCCTAGGACAT 57.352 45.455 12.22 1.58 0.00 3.06
648 691 1.682854 ACAAATCTGCCGCCATATTGG 59.317 47.619 0.00 0.00 41.55 3.16
649 692 3.117794 CAACAAATCTGCCGCCATATTG 58.882 45.455 0.00 0.00 0.00 1.90
650 693 2.101249 CCAACAAATCTGCCGCCATATT 59.899 45.455 0.00 0.00 0.00 1.28
651 694 1.682854 CCAACAAATCTGCCGCCATAT 59.317 47.619 0.00 0.00 0.00 1.78
652 695 1.102154 CCAACAAATCTGCCGCCATA 58.898 50.000 0.00 0.00 0.00 2.74
653 696 1.892338 CCAACAAATCTGCCGCCAT 59.108 52.632 0.00 0.00 0.00 4.40
654 697 2.929903 GCCAACAAATCTGCCGCCA 61.930 57.895 0.00 0.00 0.00 5.69
655 698 1.312371 TAGCCAACAAATCTGCCGCC 61.312 55.000 0.00 0.00 0.00 6.13
656 699 0.099436 CTAGCCAACAAATCTGCCGC 59.901 55.000 0.00 0.00 0.00 6.53
657 700 1.453155 ACTAGCCAACAAATCTGCCG 58.547 50.000 0.00 0.00 0.00 5.69
658 701 3.181496 GCTTACTAGCCAACAAATCTGCC 60.181 47.826 0.00 0.00 41.74 4.85
659 702 4.021191 GCTTACTAGCCAACAAATCTGC 57.979 45.455 0.00 0.00 41.74 4.26
672 715 1.677052 GTGAGTCCTCCGGCTTACTAG 59.323 57.143 0.00 0.00 0.00 2.57
673 716 1.760192 GTGAGTCCTCCGGCTTACTA 58.240 55.000 0.00 0.00 0.00 1.82
674 717 1.313812 CGTGAGTCCTCCGGCTTACT 61.314 60.000 0.00 0.00 0.00 2.24
675 718 1.139095 CGTGAGTCCTCCGGCTTAC 59.861 63.158 0.00 0.00 0.00 2.34
676 719 0.609957 TTCGTGAGTCCTCCGGCTTA 60.610 55.000 0.00 0.00 0.00 3.09
677 720 1.878656 CTTCGTGAGTCCTCCGGCTT 61.879 60.000 0.00 0.00 0.00 4.35
678 721 2.282958 TTCGTGAGTCCTCCGGCT 60.283 61.111 0.00 0.00 0.00 5.52
679 722 2.182030 CTTCGTGAGTCCTCCGGC 59.818 66.667 0.00 0.00 0.00 6.13
680 723 2.711922 CCCTTCGTGAGTCCTCCGG 61.712 68.421 0.00 0.00 0.00 5.14
681 724 1.533469 AACCCTTCGTGAGTCCTCCG 61.533 60.000 0.00 0.00 0.00 4.63
682 725 0.246910 GAACCCTTCGTGAGTCCTCC 59.753 60.000 0.00 0.00 0.00 4.30
683 726 1.202817 GAGAACCCTTCGTGAGTCCTC 59.797 57.143 0.00 0.00 34.02 3.71
684 727 1.203075 AGAGAACCCTTCGTGAGTCCT 60.203 52.381 0.00 0.00 34.02 3.85
685 728 1.067495 CAGAGAACCCTTCGTGAGTCC 60.067 57.143 0.00 0.00 34.02 3.85
686 729 1.670380 GCAGAGAACCCTTCGTGAGTC 60.670 57.143 0.00 0.00 34.02 3.36
687 730 0.318762 GCAGAGAACCCTTCGTGAGT 59.681 55.000 0.00 0.00 34.02 3.41
688 731 0.390472 GGCAGAGAACCCTTCGTGAG 60.390 60.000 0.00 0.00 34.02 3.51
689 732 1.118965 TGGCAGAGAACCCTTCGTGA 61.119 55.000 0.00 0.00 34.02 4.35
690 733 0.671781 CTGGCAGAGAACCCTTCGTG 60.672 60.000 9.42 0.00 34.02 4.35
691 734 1.122019 ACTGGCAGAGAACCCTTCGT 61.122 55.000 23.66 0.00 34.02 3.85
692 735 0.390472 GACTGGCAGAGAACCCTTCG 60.390 60.000 23.66 0.00 34.02 3.79
693 736 0.035915 GGACTGGCAGAGAACCCTTC 60.036 60.000 23.66 5.16 0.00 3.46
694 737 1.831652 CGGACTGGCAGAGAACCCTT 61.832 60.000 23.66 0.00 0.00 3.95
695 738 2.286523 CGGACTGGCAGAGAACCCT 61.287 63.158 23.66 0.00 0.00 4.34
696 739 1.617947 ATCGGACTGGCAGAGAACCC 61.618 60.000 23.66 12.18 0.00 4.11
697 740 0.460987 CATCGGACTGGCAGAGAACC 60.461 60.000 23.66 16.34 0.00 3.62
698 741 0.247736 ACATCGGACTGGCAGAGAAC 59.752 55.000 23.66 9.13 0.00 3.01
699 742 0.976641 AACATCGGACTGGCAGAGAA 59.023 50.000 23.66 3.75 0.00 2.87
700 743 0.976641 AAACATCGGACTGGCAGAGA 59.023 50.000 23.66 16.94 0.00 3.10
701 744 1.813513 AAAACATCGGACTGGCAGAG 58.186 50.000 23.66 12.00 0.00 3.35
702 745 3.055458 TGATAAAACATCGGACTGGCAGA 60.055 43.478 23.66 0.00 0.00 4.26
703 746 3.270027 TGATAAAACATCGGACTGGCAG 58.730 45.455 14.16 14.16 0.00 4.85
704 747 3.055458 TCTGATAAAACATCGGACTGGCA 60.055 43.478 0.00 0.00 0.00 4.92
705 748 3.309954 GTCTGATAAAACATCGGACTGGC 59.690 47.826 15.71 0.00 45.96 4.85
706 749 3.551890 CGTCTGATAAAACATCGGACTGG 59.448 47.826 18.97 5.94 46.78 4.00
707 750 4.421058 TCGTCTGATAAAACATCGGACTG 58.579 43.478 18.97 14.01 46.78 3.51
708 751 4.713824 TCGTCTGATAAAACATCGGACT 57.286 40.909 18.97 0.00 46.78 3.85
709 752 4.804139 ACATCGTCTGATAAAACATCGGAC 59.196 41.667 13.77 13.77 45.97 4.79
710 753 5.006153 ACATCGTCTGATAAAACATCGGA 57.994 39.130 0.00 0.00 32.18 4.55
711 754 5.977725 AGTACATCGTCTGATAAAACATCGG 59.022 40.000 0.00 0.00 32.18 4.18
712 755 7.306051 GGAAGTACATCGTCTGATAAAACATCG 60.306 40.741 0.00 0.00 32.18 3.84
713 756 7.707035 AGGAAGTACATCGTCTGATAAAACATC 59.293 37.037 0.00 0.00 32.18 3.06
714 757 7.556844 AGGAAGTACATCGTCTGATAAAACAT 58.443 34.615 0.00 0.00 32.18 2.71
715 758 6.931838 AGGAAGTACATCGTCTGATAAAACA 58.068 36.000 0.00 0.00 32.18 2.83
716 759 6.476053 GGAGGAAGTACATCGTCTGATAAAAC 59.524 42.308 17.36 0.00 35.20 2.43
717 760 6.570692 GGAGGAAGTACATCGTCTGATAAAA 58.429 40.000 17.36 0.00 35.20 1.52
718 761 5.220989 CGGAGGAAGTACATCGTCTGATAAA 60.221 44.000 19.80 0.00 41.09 1.40
719 762 4.275196 CGGAGGAAGTACATCGTCTGATAA 59.725 45.833 19.80 0.00 41.09 1.75
720 763 3.813724 CGGAGGAAGTACATCGTCTGATA 59.186 47.826 19.80 0.00 41.09 2.15
721 764 2.619177 CGGAGGAAGTACATCGTCTGAT 59.381 50.000 19.80 0.00 41.09 2.90
722 765 2.014857 CGGAGGAAGTACATCGTCTGA 58.985 52.381 19.80 0.00 41.09 3.27
723 766 1.743958 ACGGAGGAAGTACATCGTCTG 59.256 52.381 21.80 21.80 43.12 3.51
724 767 2.125773 ACGGAGGAAGTACATCGTCT 57.874 50.000 17.36 0.00 35.20 4.18
725 768 4.101235 GTTTACGGAGGAAGTACATCGTC 58.899 47.826 11.36 11.36 34.33 4.20
726 769 3.760684 AGTTTACGGAGGAAGTACATCGT 59.239 43.478 0.00 0.00 0.00 3.73
727 770 4.367386 AGTTTACGGAGGAAGTACATCG 57.633 45.455 0.00 0.00 0.00 3.84
733 776 8.358895 GCTCTTATATTAGTTTACGGAGGAAGT 58.641 37.037 0.00 0.00 0.00 3.01
734 777 8.358148 TGCTCTTATATTAGTTTACGGAGGAAG 58.642 37.037 0.00 0.00 0.00 3.46
735 778 8.241497 TGCTCTTATATTAGTTTACGGAGGAA 57.759 34.615 0.00 0.00 0.00 3.36
736 779 7.828508 TGCTCTTATATTAGTTTACGGAGGA 57.171 36.000 0.00 0.00 0.00 3.71
737 780 9.490379 AAATGCTCTTATATTAGTTTACGGAGG 57.510 33.333 0.00 0.00 0.00 4.30
786 829 9.490379 CCCTCTGTAAATTAATATAAGAGCGTT 57.510 33.333 9.98 0.00 0.00 4.84
787 830 8.867097 TCCCTCTGTAAATTAATATAAGAGCGT 58.133 33.333 9.98 0.00 0.00 5.07
788 831 9.360093 CTCCCTCTGTAAATTAATATAAGAGCG 57.640 37.037 9.98 4.77 0.00 5.03
811 854 4.901868 TCATGTGTAAACAGGGTTACTCC 58.098 43.478 8.54 0.91 35.41 3.85
812 855 8.732746 ATATTCATGTGTAAACAGGGTTACTC 57.267 34.615 8.54 5.72 35.41 2.59
815 858 9.961264 TGTTATATTCATGTGTAAACAGGGTTA 57.039 29.630 0.00 0.00 0.00 2.85
816 859 8.871629 TGTTATATTCATGTGTAAACAGGGTT 57.128 30.769 0.00 0.00 0.00 4.11
817 860 8.871629 TTGTTATATTCATGTGTAAACAGGGT 57.128 30.769 0.00 0.00 0.00 4.34
818 861 9.567848 GTTTGTTATATTCATGTGTAAACAGGG 57.432 33.333 0.00 0.00 0.00 4.45
819 862 9.567848 GGTTTGTTATATTCATGTGTAAACAGG 57.432 33.333 0.00 0.00 0.00 4.00
820 863 9.272901 CGGTTTGTTATATTCATGTGTAAACAG 57.727 33.333 0.00 0.00 0.00 3.16
821 864 7.751348 GCGGTTTGTTATATTCATGTGTAAACA 59.249 33.333 0.00 0.00 0.00 2.83
822 865 7.219344 GGCGGTTTGTTATATTCATGTGTAAAC 59.781 37.037 0.00 0.00 0.00 2.01
823 866 7.094334 TGGCGGTTTGTTATATTCATGTGTAAA 60.094 33.333 0.00 0.00 0.00 2.01
824 867 6.374613 TGGCGGTTTGTTATATTCATGTGTAA 59.625 34.615 0.00 0.00 0.00 2.41
825 868 5.880887 TGGCGGTTTGTTATATTCATGTGTA 59.119 36.000 0.00 0.00 0.00 2.90
826 869 4.702612 TGGCGGTTTGTTATATTCATGTGT 59.297 37.500 0.00 0.00 0.00 3.72
827 870 5.034152 GTGGCGGTTTGTTATATTCATGTG 58.966 41.667 0.00 0.00 0.00 3.21
828 871 4.201871 CGTGGCGGTTTGTTATATTCATGT 60.202 41.667 0.00 0.00 0.00 3.21
829 872 4.034626 TCGTGGCGGTTTGTTATATTCATG 59.965 41.667 0.00 0.00 0.00 3.07
830 873 4.193090 TCGTGGCGGTTTGTTATATTCAT 58.807 39.130 0.00 0.00 0.00 2.57
831 874 3.597255 TCGTGGCGGTTTGTTATATTCA 58.403 40.909 0.00 0.00 0.00 2.57
832 875 4.523813 CATCGTGGCGGTTTGTTATATTC 58.476 43.478 0.00 0.00 0.00 1.75
833 876 3.314080 CCATCGTGGCGGTTTGTTATATT 59.686 43.478 0.00 0.00 0.00 1.28
834 877 2.875933 CCATCGTGGCGGTTTGTTATAT 59.124 45.455 0.00 0.00 0.00 0.86
835 878 2.281517 CCATCGTGGCGGTTTGTTATA 58.718 47.619 0.00 0.00 0.00 0.98
836 879 1.091537 CCATCGTGGCGGTTTGTTAT 58.908 50.000 0.00 0.00 0.00 1.89
837 880 2.545875 CCATCGTGGCGGTTTGTTA 58.454 52.632 0.00 0.00 0.00 2.41
838 881 3.350377 CCATCGTGGCGGTTTGTT 58.650 55.556 0.00 0.00 0.00 2.83
847 890 1.140852 TCTAGGGAAATGCCATCGTGG 59.859 52.381 0.00 0.25 41.55 4.94
848 891 2.620251 TCTAGGGAAATGCCATCGTG 57.380 50.000 0.00 0.00 38.95 4.35
849 892 3.199946 TCTTTCTAGGGAAATGCCATCGT 59.800 43.478 0.00 0.00 40.19 3.73
850 893 3.808728 TCTTTCTAGGGAAATGCCATCG 58.191 45.455 0.00 0.00 40.19 3.84
851 894 6.530019 TTTTCTTTCTAGGGAAATGCCATC 57.470 37.500 0.00 0.00 40.19 3.51
852 895 6.933514 TTTTTCTTTCTAGGGAAATGCCAT 57.066 33.333 0.00 0.00 40.19 4.40
873 916 8.776376 ACTCAGAAAAATTCACATGTGTTTTT 57.224 26.923 27.05 27.05 36.71 1.94
874 917 9.520204 CTACTCAGAAAAATTCACATGTGTTTT 57.480 29.630 24.63 21.83 0.00 2.43
875 918 8.902806 TCTACTCAGAAAAATTCACATGTGTTT 58.097 29.630 24.63 17.23 0.00 2.83
876 919 8.450578 TCTACTCAGAAAAATTCACATGTGTT 57.549 30.769 24.63 11.77 0.00 3.32
877 920 7.173907 CCTCTACTCAGAAAAATTCACATGTGT 59.826 37.037 24.63 4.84 0.00 3.72
878 921 7.361542 CCCTCTACTCAGAAAAATTCACATGTG 60.362 40.741 20.18 20.18 0.00 3.21
879 922 6.656693 CCCTCTACTCAGAAAAATTCACATGT 59.343 38.462 0.00 0.00 0.00 3.21
880 923 6.404074 GCCCTCTACTCAGAAAAATTCACATG 60.404 42.308 0.00 0.00 0.00 3.21
881 924 5.649831 GCCCTCTACTCAGAAAAATTCACAT 59.350 40.000 0.00 0.00 0.00 3.21
882 925 5.003804 GCCCTCTACTCAGAAAAATTCACA 58.996 41.667 0.00 0.00 0.00 3.58
883 926 5.003804 TGCCCTCTACTCAGAAAAATTCAC 58.996 41.667 0.00 0.00 0.00 3.18
884 927 5.241403 TGCCCTCTACTCAGAAAAATTCA 57.759 39.130 0.00 0.00 0.00 2.57
885 928 6.382608 GTTTGCCCTCTACTCAGAAAAATTC 58.617 40.000 0.00 0.00 0.00 2.17
886 929 5.048713 CGTTTGCCCTCTACTCAGAAAAATT 60.049 40.000 0.00 0.00 0.00 1.82
887 930 4.455877 CGTTTGCCCTCTACTCAGAAAAAT 59.544 41.667 0.00 0.00 0.00 1.82
888 931 3.813166 CGTTTGCCCTCTACTCAGAAAAA 59.187 43.478 0.00 0.00 0.00 1.94
889 932 3.181458 ACGTTTGCCCTCTACTCAGAAAA 60.181 43.478 0.00 0.00 0.00 2.29
890 933 2.367567 ACGTTTGCCCTCTACTCAGAAA 59.632 45.455 0.00 0.00 0.00 2.52
891 934 1.968493 ACGTTTGCCCTCTACTCAGAA 59.032 47.619 0.00 0.00 0.00 3.02
892 935 1.272490 CACGTTTGCCCTCTACTCAGA 59.728 52.381 0.00 0.00 0.00 3.27
893 936 1.714794 CACGTTTGCCCTCTACTCAG 58.285 55.000 0.00 0.00 0.00 3.35
894 937 0.320421 GCACGTTTGCCCTCTACTCA 60.320 55.000 0.00 0.00 43.66 3.41
895 938 2.457080 GCACGTTTGCCCTCTACTC 58.543 57.895 0.00 0.00 43.66 2.59
896 939 4.695560 GCACGTTTGCCCTCTACT 57.304 55.556 0.00 0.00 43.66 2.57
905 948 4.214437 GTTTCTGAATCTCTGCACGTTTG 58.786 43.478 0.00 0.00 0.00 2.93
906 949 3.876914 TGTTTCTGAATCTCTGCACGTTT 59.123 39.130 0.00 0.00 0.00 3.60
907 950 3.466836 TGTTTCTGAATCTCTGCACGTT 58.533 40.909 0.00 0.00 0.00 3.99
908 951 3.111853 TGTTTCTGAATCTCTGCACGT 57.888 42.857 0.00 0.00 0.00 4.49
909 952 3.496130 AGTTGTTTCTGAATCTCTGCACG 59.504 43.478 0.00 0.00 0.00 5.34
910 953 5.008019 TGAAGTTGTTTCTGAATCTCTGCAC 59.992 40.000 0.00 0.00 36.71 4.57
911 954 5.125356 TGAAGTTGTTTCTGAATCTCTGCA 58.875 37.500 0.00 0.00 36.71 4.41
912 955 5.468072 TCTGAAGTTGTTTCTGAATCTCTGC 59.532 40.000 0.00 0.00 39.78 4.26
913 956 6.346439 CGTCTGAAGTTGTTTCTGAATCTCTG 60.346 42.308 0.00 0.00 42.90 3.35
914 957 5.694006 CGTCTGAAGTTGTTTCTGAATCTCT 59.306 40.000 0.00 0.00 42.90 3.10
915 958 5.613577 GCGTCTGAAGTTGTTTCTGAATCTC 60.614 44.000 0.00 0.00 42.90 2.75
916 959 4.212214 GCGTCTGAAGTTGTTTCTGAATCT 59.788 41.667 0.00 0.00 42.90 2.40
917 960 4.458708 GCGTCTGAAGTTGTTTCTGAATC 58.541 43.478 0.00 0.00 42.90 2.52
918 961 3.251004 GGCGTCTGAAGTTGTTTCTGAAT 59.749 43.478 0.00 0.00 42.90 2.57
919 962 2.612212 GGCGTCTGAAGTTGTTTCTGAA 59.388 45.455 0.00 0.00 42.90 3.02
920 963 2.210116 GGCGTCTGAAGTTGTTTCTGA 58.790 47.619 0.00 0.00 40.25 3.27
921 964 1.939934 TGGCGTCTGAAGTTGTTTCTG 59.060 47.619 0.00 0.00 36.71 3.02
922 965 2.158957 TCTGGCGTCTGAAGTTGTTTCT 60.159 45.455 0.00 0.00 36.71 2.52
923 966 2.210116 TCTGGCGTCTGAAGTTGTTTC 58.790 47.619 0.00 0.00 36.29 2.78
924 967 2.325583 TCTGGCGTCTGAAGTTGTTT 57.674 45.000 0.00 0.00 0.00 2.83
925 968 2.550830 ATCTGGCGTCTGAAGTTGTT 57.449 45.000 0.00 0.00 0.00 2.83
926 969 2.563179 AGTATCTGGCGTCTGAAGTTGT 59.437 45.455 0.00 0.00 0.00 3.32
927 970 2.926200 CAGTATCTGGCGTCTGAAGTTG 59.074 50.000 0.00 0.00 0.00 3.16
928 971 2.675317 GCAGTATCTGGCGTCTGAAGTT 60.675 50.000 0.00 0.00 31.21 2.66
929 972 1.134965 GCAGTATCTGGCGTCTGAAGT 60.135 52.381 0.00 0.00 31.21 3.01
930 973 1.134995 TGCAGTATCTGGCGTCTGAAG 60.135 52.381 0.00 0.00 31.21 3.02
931 974 0.894835 TGCAGTATCTGGCGTCTGAA 59.105 50.000 0.00 0.00 31.21 3.02
932 975 0.457443 CTGCAGTATCTGGCGTCTGA 59.543 55.000 5.25 0.00 31.21 3.27
933 976 0.457443 TCTGCAGTATCTGGCGTCTG 59.543 55.000 14.67 0.00 31.21 3.51
934 977 1.186200 TTCTGCAGTATCTGGCGTCT 58.814 50.000 14.67 0.00 31.21 4.18
935 978 2.010145 TTTCTGCAGTATCTGGCGTC 57.990 50.000 14.67 0.00 31.21 5.19
936 979 2.555199 GATTTCTGCAGTATCTGGCGT 58.445 47.619 14.67 0.00 31.21 5.68
937 980 1.524355 CGATTTCTGCAGTATCTGGCG 59.476 52.381 14.67 6.18 31.21 5.69
938 981 2.799412 CTCGATTTCTGCAGTATCTGGC 59.201 50.000 14.67 0.00 31.21 4.85
939 982 2.799412 GCTCGATTTCTGCAGTATCTGG 59.201 50.000 14.67 12.71 31.21 3.86
940 983 2.799412 GGCTCGATTTCTGCAGTATCTG 59.201 50.000 14.67 13.08 34.12 2.90
941 984 2.544694 CGGCTCGATTTCTGCAGTATCT 60.545 50.000 14.67 0.00 0.00 1.98
942 985 1.789464 CGGCTCGATTTCTGCAGTATC 59.211 52.381 14.67 15.88 0.00 2.24
943 986 1.137086 ACGGCTCGATTTCTGCAGTAT 59.863 47.619 14.67 8.68 33.78 2.12
944 987 0.530744 ACGGCTCGATTTCTGCAGTA 59.469 50.000 14.67 0.00 33.78 2.74
945 988 0.320771 AACGGCTCGATTTCTGCAGT 60.321 50.000 14.67 0.00 36.76 4.40
946 989 0.095935 CAACGGCTCGATTTCTGCAG 59.904 55.000 7.63 7.63 0.00 4.41
947 990 1.911293 GCAACGGCTCGATTTCTGCA 61.911 55.000 1.50 0.00 36.96 4.41
948 991 1.226128 GCAACGGCTCGATTTCTGC 60.226 57.895 1.50 0.00 36.96 4.26
949 992 1.298157 TGGCAACGGCTCGATTTCTG 61.298 55.000 1.50 0.00 40.87 3.02
950 993 1.003839 TGGCAACGGCTCGATTTCT 60.004 52.632 1.50 0.00 40.87 2.52
951 994 1.134694 GTGGCAACGGCTCGATTTC 59.865 57.895 0.00 0.00 40.87 2.17
952 995 1.298859 GAGTGGCAACGGCTCGATTT 61.299 55.000 0.00 0.00 40.87 2.17
953 996 1.741770 GAGTGGCAACGGCTCGATT 60.742 57.895 0.00 0.00 40.87 3.34
954 997 1.320344 TAGAGTGGCAACGGCTCGAT 61.320 55.000 0.00 0.00 43.33 3.59
955 998 1.974875 TAGAGTGGCAACGGCTCGA 60.975 57.895 0.00 0.00 43.33 4.04
956 999 1.805945 GTAGAGTGGCAACGGCTCG 60.806 63.158 0.00 0.00 43.33 5.03
957 1000 1.448013 GGTAGAGTGGCAACGGCTC 60.448 63.158 0.00 0.00 40.87 4.70
958 1001 0.613853 TAGGTAGAGTGGCAACGGCT 60.614 55.000 0.00 0.00 40.87 5.52
959 1002 0.459759 GTAGGTAGAGTGGCAACGGC 60.460 60.000 0.00 0.00 42.51 5.68
960 1003 1.183549 AGTAGGTAGAGTGGCAACGG 58.816 55.000 0.00 0.00 42.51 4.44
961 1004 3.314541 AAAGTAGGTAGAGTGGCAACG 57.685 47.619 0.00 0.00 42.51 4.10
962 1005 4.895961 AGAAAAGTAGGTAGAGTGGCAAC 58.104 43.478 0.00 0.00 0.00 4.17
963 1006 4.020485 GGAGAAAAGTAGGTAGAGTGGCAA 60.020 45.833 0.00 0.00 0.00 4.52
964 1007 3.514309 GGAGAAAAGTAGGTAGAGTGGCA 59.486 47.826 0.00 0.00 0.00 4.92
965 1008 3.118702 GGGAGAAAAGTAGGTAGAGTGGC 60.119 52.174 0.00 0.00 0.00 5.01
966 1009 3.130693 CGGGAGAAAAGTAGGTAGAGTGG 59.869 52.174 0.00 0.00 0.00 4.00
967 1010 3.762823 ACGGGAGAAAAGTAGGTAGAGTG 59.237 47.826 0.00 0.00 0.00 3.51
968 1011 4.015764 GACGGGAGAAAAGTAGGTAGAGT 58.984 47.826 0.00 0.00 0.00 3.24
969 1012 3.065095 CGACGGGAGAAAAGTAGGTAGAG 59.935 52.174 0.00 0.00 0.00 2.43
970 1013 3.012518 CGACGGGAGAAAAGTAGGTAGA 58.987 50.000 0.00 0.00 0.00 2.59
971 1014 2.479219 GCGACGGGAGAAAAGTAGGTAG 60.479 54.545 0.00 0.00 0.00 3.18
972 1015 1.474077 GCGACGGGAGAAAAGTAGGTA 59.526 52.381 0.00 0.00 0.00 3.08
973 1016 0.245813 GCGACGGGAGAAAAGTAGGT 59.754 55.000 0.00 0.00 0.00 3.08
974 1017 0.245539 TGCGACGGGAGAAAAGTAGG 59.754 55.000 0.00 0.00 0.00 3.18
975 1018 1.725164 GTTGCGACGGGAGAAAAGTAG 59.275 52.381 0.00 0.00 0.00 2.57
976 1019 1.068895 TGTTGCGACGGGAGAAAAGTA 59.931 47.619 0.00 0.00 0.00 2.24
977 1020 0.179067 TGTTGCGACGGGAGAAAAGT 60.179 50.000 0.00 0.00 0.00 2.66
978 1021 1.156736 ATGTTGCGACGGGAGAAAAG 58.843 50.000 0.00 0.00 0.00 2.27
979 1022 1.533731 GAATGTTGCGACGGGAGAAAA 59.466 47.619 0.00 0.00 0.00 2.29
980 1023 1.153353 GAATGTTGCGACGGGAGAAA 58.847 50.000 0.00 0.00 0.00 2.52
981 1024 1.011968 CGAATGTTGCGACGGGAGAA 61.012 55.000 0.00 0.00 0.00 2.87
982 1025 1.445410 CGAATGTTGCGACGGGAGA 60.445 57.895 0.00 0.00 0.00 3.71
983 1026 1.011968 TTCGAATGTTGCGACGGGAG 61.012 55.000 0.00 0.00 37.52 4.30
984 1027 0.600518 TTTCGAATGTTGCGACGGGA 60.601 50.000 0.00 0.00 37.52 5.14
985 1028 0.236187 TTTTCGAATGTTGCGACGGG 59.764 50.000 0.00 0.00 37.52 5.28
986 1029 2.025544 TTTTTCGAATGTTGCGACGG 57.974 45.000 0.00 0.00 37.52 4.79
1133 1179 0.874607 GATACTGATCGGCGCGGTTT 60.875 55.000 15.06 3.92 0.00 3.27
1140 1186 0.664767 GCTCGTGGATACTGATCGGC 60.665 60.000 0.00 0.00 32.28 5.54
1143 1189 0.318762 GGGGCTCGTGGATACTGATC 59.681 60.000 0.00 0.00 37.61 2.92
1144 1190 1.122019 GGGGGCTCGTGGATACTGAT 61.122 60.000 0.00 0.00 37.61 2.90
1145 1191 1.760875 GGGGGCTCGTGGATACTGA 60.761 63.158 0.00 0.00 37.61 3.41
1146 1192 2.822399 GGGGGCTCGTGGATACTG 59.178 66.667 0.00 0.00 37.61 2.74
1147 1193 2.838225 CGGGGGCTCGTGGATACT 60.838 66.667 0.00 0.00 37.61 2.12
1148 1194 4.603946 GCGGGGGCTCGTGGATAC 62.604 72.222 3.24 0.00 0.00 2.24
1183 1229 4.530857 GGACCTGGTCATCGGCGG 62.531 72.222 26.94 0.00 33.68 6.13
1388 1434 1.375396 CTTGACCGCCATTCCGTCA 60.375 57.895 0.00 0.00 0.00 4.35
1426 1472 0.034896 GCAGTACCCGGATACCATGG 59.965 60.000 11.19 11.19 0.00 3.66
1428 1474 1.469335 CGGCAGTACCCGGATACCAT 61.469 60.000 0.73 0.00 44.46 3.55
1474 1520 3.181967 GCATCGCGTCGAACAGCT 61.182 61.111 5.77 0.00 39.99 4.24
1547 1593 2.108566 CTCGCCTCCCTCAGCATG 59.891 66.667 0.00 0.00 37.54 4.06
1638 1684 3.394836 GGCCTCCTGGAAGTCGCT 61.395 66.667 0.00 0.00 34.57 4.93
1641 1687 1.225704 CCATGGCCTCCTGGAAGTC 59.774 63.158 12.64 0.00 34.24 3.01
1751 1797 1.227089 CATCCTCTCGAACAGCCGG 60.227 63.158 0.00 0.00 0.00 6.13
1774 1820 3.756963 GGTCCAAGAAACCACATTCCTAC 59.243 47.826 0.00 0.00 36.75 3.18
1919 1965 0.883814 GAGCCTCATTCATCTGGCCG 60.884 60.000 0.00 0.00 45.94 6.13
1931 1977 3.558931 TCAAACAAACTCTGAGCCTCA 57.441 42.857 4.19 0.00 0.00 3.86
1943 1989 2.224137 TGCGGGCATTGAATCAAACAAA 60.224 40.909 0.00 0.00 0.00 2.83
1955 2001 1.535204 CCAGGTTCTTTGCGGGCATT 61.535 55.000 0.00 0.00 0.00 3.56
2352 2398 1.475751 CGAGCTGGGCTTGTATCCATT 60.476 52.381 0.00 0.00 39.88 3.16
2468 5928 1.738099 GTGGTGCTCGATTGTCGCT 60.738 57.895 0.00 0.00 40.21 4.93
2469 5929 2.027073 TGTGGTGCTCGATTGTCGC 61.027 57.895 0.00 0.00 40.21 5.19
2550 6010 1.965643 GTGCATATCCAATGGCATGGT 59.034 47.619 0.00 0.00 41.46 3.55
2570 6030 2.202362 CTCAGGACAGCGTCGTCG 60.202 66.667 0.00 0.00 36.73 5.12
2730 6190 1.316266 CCATCTCCTCCCACCTCCT 59.684 63.158 0.00 0.00 0.00 3.69
2929 6390 2.554142 CAGCTCACACTGTTTCAGTCA 58.446 47.619 0.00 0.00 43.43 3.41
3007 6471 5.523188 AGCTTGTTCATCAAAGAGATCGATC 59.477 40.000 17.91 17.91 33.72 3.69
3037 6502 4.517075 TGTCAAAGCATTGTTCGTGGAATA 59.483 37.500 1.04 0.00 37.79 1.75
3040 6505 2.032799 GTGTCAAAGCATTGTTCGTGGA 59.967 45.455 1.04 0.00 37.79 4.02
3045 6510 5.976534 TGTATTGTGTGTCAAAGCATTGTTC 59.023 36.000 1.04 0.00 39.62 3.18
3046 6511 5.900425 TGTATTGTGTGTCAAAGCATTGTT 58.100 33.333 1.04 0.00 39.62 2.83
3065 6530 6.830838 TCGTCCAGCATCTCATATATCTGTAT 59.169 38.462 0.00 0.00 0.00 2.29
3187 6897 3.142174 GGTTCAGGAGTTCAGGAGTTTG 58.858 50.000 0.00 0.00 0.00 2.93
3212 6930 3.149196 TGAAACACAGCTCCAGATTTCC 58.851 45.455 0.00 0.00 0.00 3.13
3228 6946 5.627499 TCAGCACCAATACATTCTGAAAC 57.373 39.130 0.00 0.00 0.00 2.78
3267 7001 3.498481 CCCAAATGGACAAGAAGAGGACA 60.498 47.826 0.00 0.00 37.39 4.02
3268 7002 3.084786 CCCAAATGGACAAGAAGAGGAC 58.915 50.000 0.00 0.00 37.39 3.85
3272 7006 2.555227 GCCTCCCAAATGGACAAGAAGA 60.555 50.000 0.00 0.00 38.61 2.87
3282 7016 1.624813 ACCAAACATGCCTCCCAAATG 59.375 47.619 0.00 0.00 0.00 2.32
3283 7017 1.624813 CACCAAACATGCCTCCCAAAT 59.375 47.619 0.00 0.00 0.00 2.32
3284 7018 1.047002 CACCAAACATGCCTCCCAAA 58.953 50.000 0.00 0.00 0.00 3.28
3285 7019 1.470996 GCACCAAACATGCCTCCCAA 61.471 55.000 0.00 0.00 37.08 4.12
3309 7050 0.610232 GCACCTCCACCAAGAGCATT 60.610 55.000 0.00 0.00 32.17 3.56
3310 7051 1.001641 GCACCTCCACCAAGAGCAT 60.002 57.895 0.00 0.00 32.17 3.79
3312 7053 1.673665 CAGCACCTCCACCAAGAGC 60.674 63.158 0.00 0.00 32.17 4.09
3313 7054 0.397941 TTCAGCACCTCCACCAAGAG 59.602 55.000 0.00 0.00 0.00 2.85
3315 7056 0.397941 TCTTCAGCACCTCCACCAAG 59.602 55.000 0.00 0.00 0.00 3.61
3316 7057 1.003580 GATCTTCAGCACCTCCACCAA 59.996 52.381 0.00 0.00 0.00 3.67
3319 7060 1.552337 TGAGATCTTCAGCACCTCCAC 59.448 52.381 0.00 0.00 0.00 4.02
3320 7061 1.552337 GTGAGATCTTCAGCACCTCCA 59.448 52.381 0.00 0.00 36.21 3.86
3321 7062 1.830477 AGTGAGATCTTCAGCACCTCC 59.170 52.381 8.29 0.00 36.21 4.30
3322 7063 2.418471 CCAGTGAGATCTTCAGCACCTC 60.418 54.545 8.29 0.00 36.21 3.85
3323 7064 1.554160 CCAGTGAGATCTTCAGCACCT 59.446 52.381 8.29 0.00 36.21 4.00
3331 7072 4.338879 CCAACAAATCCCAGTGAGATCTT 58.661 43.478 0.00 0.00 0.00 2.40
3360 7101 6.286758 TCTCATGCCTTATCTCTGAATCAAC 58.713 40.000 0.00 0.00 0.00 3.18
3362 7103 6.464039 CCTTCTCATGCCTTATCTCTGAATCA 60.464 42.308 0.00 0.00 0.00 2.57
3363 7104 5.933463 CCTTCTCATGCCTTATCTCTGAATC 59.067 44.000 0.00 0.00 0.00 2.52
3455 7198 4.221342 CCGTGAACAACAGATCACAAATG 58.779 43.478 6.70 0.00 44.84 2.32
3468 7216 2.486548 CCTCCTTTCTTCCCGTGAACAA 60.487 50.000 0.00 0.00 0.00 2.83
3470 7218 1.346722 TCCTCCTTTCTTCCCGTGAAC 59.653 52.381 0.00 0.00 0.00 3.18
3476 7224 1.630878 TCTTGCTCCTCCTTTCTTCCC 59.369 52.381 0.00 0.00 0.00 3.97
3479 7227 3.392616 TGTCTTCTTGCTCCTCCTTTCTT 59.607 43.478 0.00 0.00 0.00 2.52
3485 7233 2.765699 AGAGATGTCTTCTTGCTCCTCC 59.234 50.000 0.00 0.00 33.74 4.30
3487 7235 3.439154 TCAGAGATGTCTTCTTGCTCCT 58.561 45.455 0.00 0.00 33.74 3.69
3489 7237 5.477510 TCTTTCAGAGATGTCTTCTTGCTC 58.522 41.667 0.00 0.00 33.74 4.26
3505 7314 2.636830 AGCCAATCGACCATCTTTCAG 58.363 47.619 0.00 0.00 0.00 3.02
3518 7327 1.291132 GCAGGTTCGTCTAGCCAATC 58.709 55.000 0.00 0.00 0.00 2.67
3549 7360 1.131883 GGTAATGAACAGCAGCAGCAG 59.868 52.381 3.17 0.00 45.49 4.24
3570 7381 0.597118 TTCAATGTTGCCGCACTTGC 60.597 50.000 0.00 0.00 37.78 4.01
3729 7578 9.884465 CCACTTTCTTTACATTTCTTTGTAGAG 57.116 33.333 0.00 0.00 36.26 2.43
3731 7580 9.450807 CACCACTTTCTTTACATTTCTTTGTAG 57.549 33.333 0.00 0.00 33.81 2.74
3748 7686 3.554960 GGGCCATCTTTTTCACCACTTTC 60.555 47.826 4.39 0.00 0.00 2.62
3786 7724 0.738389 AACAACACTTCAGCCCAACG 59.262 50.000 0.00 0.00 0.00 4.10
3941 7890 5.984695 ACACACATGATGACTACTACTGT 57.015 39.130 0.00 0.00 0.00 3.55
3942 7891 6.625362 AGAACACACATGATGACTACTACTG 58.375 40.000 0.00 0.00 0.00 2.74
3997 8195 3.996825 GGCACCAAATAGCACGAAG 57.003 52.632 0.00 0.00 0.00 3.79
4033 8232 2.177734 TGGCTGCAAGAAATTGGCATA 58.822 42.857 0.50 0.00 36.87 3.14
4049 8647 3.385755 GTGATCCCATTGCTATTTTGGCT 59.614 43.478 0.00 0.00 0.00 4.75
4066 8676 8.414778 ACACCTTAATTGCTAGTACTAGTGATC 58.585 37.037 26.76 13.42 35.65 2.92
4076 8686 9.899661 TGTTATTATCACACCTTAATTGCTAGT 57.100 29.630 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.