Multiple sequence alignment - TraesCS4A01G325100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G325100 chr4A 100.000 2843 0 0 551 3393 612441985 612444827 0.000000e+00 5251.0
1 TraesCS4A01G325100 chr4A 87.598 1016 77 17 1481 2454 613155747 613154739 0.000000e+00 1133.0
2 TraesCS4A01G325100 chr4A 87.526 962 74 18 1478 2397 612391354 612392311 0.000000e+00 1070.0
3 TraesCS4A01G325100 chr4A 86.177 926 114 9 560 1478 612998990 612998072 0.000000e+00 989.0
4 TraesCS4A01G325100 chr4A 100.000 450 0 0 1 450 612441435 612441884 0.000000e+00 832.0
5 TraesCS4A01G325100 chr4A 88.519 601 64 4 1853 2453 612974133 612973538 0.000000e+00 723.0
6 TraesCS4A01G325100 chr4A 88.214 543 57 4 556 1094 612975538 612974999 2.850000e-180 641.0
7 TraesCS4A01G325100 chr4A 91.832 453 33 4 1 450 612457911 612458362 2.220000e-176 628.0
8 TraesCS4A01G325100 chr4A 81.077 650 78 26 568 1183 612685046 612684408 8.520000e-131 477.0
9 TraesCS4A01G325100 chr4A 89.873 316 30 2 2074 2389 612998075 612997762 4.080000e-109 405.0
10 TraesCS4A01G325100 chr4A 88.629 299 34 0 1185 1483 612974753 612974455 6.920000e-97 364.0
11 TraesCS4A01G325100 chr5B 90.008 1331 87 13 556 1845 693532271 693533596 0.000000e+00 1679.0
12 TraesCS4A01G325100 chr5B 89.482 1331 93 14 556 1845 712304823 712303499 0.000000e+00 1639.0
13 TraesCS4A01G325100 chr5B 89.327 1293 84 15 551 1801 693449561 693450841 0.000000e+00 1574.0
14 TraesCS4A01G325100 chr5B 88.500 1287 115 18 1845 3110 693450956 693452230 0.000000e+00 1526.0
15 TraesCS4A01G325100 chr5B 87.578 1280 94 22 1842 3108 712303466 712302239 0.000000e+00 1423.0
16 TraesCS4A01G325100 chr5B 89.640 1110 86 12 2013 3110 693533726 693534818 0.000000e+00 1386.0
17 TraesCS4A01G325100 chr5B 91.868 455 31 5 1 450 693671167 693671620 6.180000e-177 630.0
18 TraesCS4A01G325100 chr5B 92.647 272 17 2 3111 3379 693534847 693535118 4.110000e-104 388.0
19 TraesCS4A01G325100 chr5B 91.549 284 18 3 3112 3393 712302207 712301928 1.480000e-103 387.0
20 TraesCS4A01G325100 chr5B 90.526 285 27 0 1561 1845 693585951 693586235 8.890000e-101 377.0
21 TraesCS4A01G325100 chr5B 90.175 285 28 0 1561 1845 693693888 693693604 4.130000e-99 372.0
22 TraesCS4A01G325100 chr5B 80.000 435 69 10 32 450 693873894 693874326 4.250000e-79 305.0
23 TraesCS4A01G325100 chr5B 77.581 339 60 13 609 942 693713046 693712719 1.240000e-44 191.0
24 TraesCS4A01G325100 chr5B 91.453 117 7 2 3266 3379 693452345 693452461 1.260000e-34 158.0
25 TraesCS4A01G325100 chr5B 93.939 99 6 0 3111 3209 693452258 693452356 2.110000e-32 150.0
26 TraesCS4A01G325100 chr5D 90.248 1292 81 8 551 1801 559242244 559243531 0.000000e+00 1646.0
27 TraesCS4A01G325100 chr5D 88.791 1356 99 22 2064 3379 559243832 559245174 0.000000e+00 1613.0
28 TraesCS4A01G325100 chr5D 87.379 618 58 15 1842 2442 559466175 559465561 0.000000e+00 691.0
29 TraesCS4A01G325100 chr5D 91.593 452 35 3 1 450 559429276 559429726 3.720000e-174 621.0
30 TraesCS4A01G325100 chr5D 91.103 281 25 0 1561 1841 559466484 559466204 6.870000e-102 381.0
31 TraesCS4A01G325100 chr5D 79.869 457 76 9 9 450 559611380 559611835 1.520000e-83 320.0
32 TraesCS4A01G325100 chr5D 76.471 646 104 36 563 1183 559343828 559344450 1.180000e-79 307.0
33 TraesCS4A01G325100 chr3A 87.593 1338 112 20 556 1844 743644907 743643575 0.000000e+00 1502.0
34 TraesCS4A01G325100 chr3A 86.423 383 29 6 1482 1841 743552248 743551866 6.820000e-107 398.0
35 TraesCS4A01G325100 chr3A 75.721 659 85 40 562 1183 743572516 743571896 9.340000e-66 261.0
36 TraesCS4A01G325100 chr6A 86.146 628 48 17 1845 2453 178437873 178437266 2.850000e-180 641.0
37 TraesCS4A01G325100 chr6A 82.890 263 33 3 1223 1479 178461602 178461346 3.410000e-55 226.0
38 TraesCS4A01G325100 chr6B 85.920 625 51 15 1845 2453 234845855 234845252 1.720000e-177 632.0
39 TraesCS4A01G325100 chr6B 91.814 452 34 3 1 450 20243744 20243294 7.990000e-176 627.0
40 TraesCS4A01G325100 chr6B 82.129 263 35 2 1223 1479 234870545 234870289 7.370000e-52 215.0
41 TraesCS4A01G325100 chr6B 78.472 144 27 4 2605 2747 652506536 652506396 1.300000e-14 91.6
42 TraesCS4A01G325100 chrUn 90.813 283 24 2 1561 1841 290197493 290197211 8.890000e-101 377.0
43 TraesCS4A01G325100 chr1D 82.927 246 35 4 3151 3393 491438573 491438332 7.370000e-52 215.0
44 TraesCS4A01G325100 chr7B 90.816 98 9 0 190 287 503101148 503101051 7.640000e-27 132.0
45 TraesCS4A01G325100 chr2D 88.288 111 12 1 2768 2878 11260433 11260542 7.640000e-27 132.0
46 TraesCS4A01G325100 chr7A 77.714 175 35 4 2784 2956 106824395 106824567 1.670000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G325100 chr4A 612441435 612444827 3392 False 3041.500000 5251 100.000000 1 3393 2 chr4A.!!$F3 3392
1 TraesCS4A01G325100 chr4A 613154739 613155747 1008 True 1133.000000 1133 87.598000 1481 2454 1 chr4A.!!$R2 973
2 TraesCS4A01G325100 chr4A 612391354 612392311 957 False 1070.000000 1070 87.526000 1478 2397 1 chr4A.!!$F1 919
3 TraesCS4A01G325100 chr4A 612997762 612998990 1228 True 697.000000 989 88.025000 560 2389 2 chr4A.!!$R4 1829
4 TraesCS4A01G325100 chr4A 612973538 612975538 2000 True 576.000000 723 88.454000 556 2453 3 chr4A.!!$R3 1897
5 TraesCS4A01G325100 chr4A 612684408 612685046 638 True 477.000000 477 81.077000 568 1183 1 chr4A.!!$R1 615
6 TraesCS4A01G325100 chr5B 693532271 693535118 2847 False 1151.000000 1679 90.765000 556 3379 3 chr5B.!!$F5 2823
7 TraesCS4A01G325100 chr5B 712301928 712304823 2895 True 1149.666667 1639 89.536333 556 3393 3 chr5B.!!$R3 2837
8 TraesCS4A01G325100 chr5B 693449561 693452461 2900 False 852.000000 1574 90.804750 551 3379 4 chr5B.!!$F4 2828
9 TraesCS4A01G325100 chr5D 559242244 559245174 2930 False 1629.500000 1646 89.519500 551 3379 2 chr5D.!!$F4 2828
10 TraesCS4A01G325100 chr5D 559465561 559466484 923 True 536.000000 691 89.241000 1561 2442 2 chr5D.!!$R1 881
11 TraesCS4A01G325100 chr5D 559343828 559344450 622 False 307.000000 307 76.471000 563 1183 1 chr5D.!!$F1 620
12 TraesCS4A01G325100 chr3A 743643575 743644907 1332 True 1502.000000 1502 87.593000 556 1844 1 chr3A.!!$R3 1288
13 TraesCS4A01G325100 chr3A 743571896 743572516 620 True 261.000000 261 75.721000 562 1183 1 chr3A.!!$R2 621
14 TraesCS4A01G325100 chr6A 178437266 178437873 607 True 641.000000 641 86.146000 1845 2453 1 chr6A.!!$R1 608
15 TraesCS4A01G325100 chr6B 234845252 234845855 603 True 632.000000 632 85.920000 1845 2453 1 chr6B.!!$R2 608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
341 342 0.104855 AGTTGTGAAGTCTGAGCGCA 59.895 50.0 11.47 0.0 0.0 6.09 F
1058 1128 0.462789 TCGCCCCGTCTATTTCTTCC 59.537 55.0 0.00 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1210 1443 0.179134 CGAACCAGGTTAGAGAGCGG 60.179 60.0 4.25 0.0 0.0 5.52 R
3014 3552 0.511221 AATTGTGCCGACGTTTCTCG 59.489 50.0 0.00 0.0 46.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.961637 TCCCCATCACGCAATCAG 57.038 55.556 0.00 0.00 0.00 2.90
18 19 1.990424 TCCCCATCACGCAATCAGT 59.010 52.632 0.00 0.00 0.00 3.41
19 20 0.327924 TCCCCATCACGCAATCAGTT 59.672 50.000 0.00 0.00 0.00 3.16
20 21 0.734889 CCCCATCACGCAATCAGTTC 59.265 55.000 0.00 0.00 0.00 3.01
21 22 1.679944 CCCCATCACGCAATCAGTTCT 60.680 52.381 0.00 0.00 0.00 3.01
22 23 2.419990 CCCCATCACGCAATCAGTTCTA 60.420 50.000 0.00 0.00 0.00 2.10
23 24 2.609459 CCCATCACGCAATCAGTTCTAC 59.391 50.000 0.00 0.00 0.00 2.59
24 25 3.525537 CCATCACGCAATCAGTTCTACT 58.474 45.455 0.00 0.00 0.00 2.57
25 26 3.935203 CCATCACGCAATCAGTTCTACTT 59.065 43.478 0.00 0.00 0.00 2.24
26 27 4.393062 CCATCACGCAATCAGTTCTACTTT 59.607 41.667 0.00 0.00 0.00 2.66
27 28 4.990543 TCACGCAATCAGTTCTACTTTG 57.009 40.909 0.00 0.00 0.00 2.77
28 29 4.377021 TCACGCAATCAGTTCTACTTTGT 58.623 39.130 0.00 0.00 0.00 2.83
29 30 5.534407 TCACGCAATCAGTTCTACTTTGTA 58.466 37.500 0.00 0.00 0.00 2.41
30 31 5.633601 TCACGCAATCAGTTCTACTTTGTAG 59.366 40.000 0.00 0.00 0.00 2.74
31 32 5.405571 CACGCAATCAGTTCTACTTTGTAGT 59.594 40.000 4.89 0.00 38.44 2.73
32 33 6.584942 CACGCAATCAGTTCTACTTTGTAGTA 59.415 38.462 4.89 0.00 35.78 1.82
33 34 7.115805 CACGCAATCAGTTCTACTTTGTAGTAA 59.884 37.037 4.89 0.00 36.46 2.24
34 35 7.817962 ACGCAATCAGTTCTACTTTGTAGTAAT 59.182 33.333 4.89 0.00 36.46 1.89
35 36 8.656849 CGCAATCAGTTCTACTTTGTAGTAATT 58.343 33.333 4.89 0.00 36.46 1.40
68 69 9.354673 TGTATTCTCTTTTCATCTTTTTCCTGT 57.645 29.630 0.00 0.00 0.00 4.00
71 72 8.980481 TTCTCTTTTCATCTTTTTCCTGTACT 57.020 30.769 0.00 0.00 0.00 2.73
72 73 8.980481 TCTCTTTTCATCTTTTTCCTGTACTT 57.020 30.769 0.00 0.00 0.00 2.24
75 76 9.284968 TCTTTTCATCTTTTTCCTGTACTTAGG 57.715 33.333 0.00 0.00 39.29 2.69
76 77 9.284968 CTTTTCATCTTTTTCCTGTACTTAGGA 57.715 33.333 0.00 0.00 44.95 2.94
77 78 8.848474 TTTCATCTTTTTCCTGTACTTAGGAG 57.152 34.615 2.46 0.00 46.94 3.69
78 79 7.792364 TCATCTTTTTCCTGTACTTAGGAGA 57.208 36.000 2.46 0.00 46.94 3.71
79 80 7.612677 TCATCTTTTTCCTGTACTTAGGAGAC 58.387 38.462 2.46 0.00 46.94 3.36
80 81 7.455008 TCATCTTTTTCCTGTACTTAGGAGACT 59.545 37.037 2.46 0.00 46.94 3.24
81 82 6.994221 TCTTTTTCCTGTACTTAGGAGACTG 58.006 40.000 2.46 0.00 46.94 3.51
82 83 6.553852 TCTTTTTCCTGTACTTAGGAGACTGT 59.446 38.462 2.46 0.00 46.94 3.55
83 84 7.727186 TCTTTTTCCTGTACTTAGGAGACTGTA 59.273 37.037 2.46 0.00 46.94 2.74
84 85 7.844493 TTTTCCTGTACTTAGGAGACTGTAA 57.156 36.000 2.46 0.00 46.94 2.41
85 86 7.844493 TTTCCTGTACTTAGGAGACTGTAAA 57.156 36.000 2.46 0.00 46.94 2.01
86 87 7.844493 TTCCTGTACTTAGGAGACTGTAAAA 57.156 36.000 2.46 0.00 46.94 1.52
87 88 8.431910 TTCCTGTACTTAGGAGACTGTAAAAT 57.568 34.615 2.46 0.00 46.94 1.82
88 89 7.837863 TCCTGTACTTAGGAGACTGTAAAATG 58.162 38.462 0.00 0.00 41.85 2.32
89 90 7.042335 CCTGTACTTAGGAGACTGTAAAATGG 58.958 42.308 0.00 0.00 43.88 3.16
90 91 7.310485 CCTGTACTTAGGAGACTGTAAAATGGT 60.310 40.741 0.00 0.00 43.88 3.55
91 92 7.383687 TGTACTTAGGAGACTGTAAAATGGTG 58.616 38.462 0.00 0.00 43.88 4.17
92 93 5.805728 ACTTAGGAGACTGTAAAATGGTGG 58.194 41.667 0.00 0.00 43.88 4.61
93 94 5.546499 ACTTAGGAGACTGTAAAATGGTGGA 59.454 40.000 0.00 0.00 43.88 4.02
94 95 4.993705 AGGAGACTGTAAAATGGTGGAA 57.006 40.909 0.00 0.00 41.13 3.53
95 96 4.652822 AGGAGACTGTAAAATGGTGGAAC 58.347 43.478 0.00 0.00 41.13 3.62
96 97 4.351111 AGGAGACTGTAAAATGGTGGAACT 59.649 41.667 0.00 0.00 41.13 3.01
97 98 4.695928 GGAGACTGTAAAATGGTGGAACTC 59.304 45.833 0.00 0.00 36.74 3.01
98 99 5.513267 GGAGACTGTAAAATGGTGGAACTCT 60.513 44.000 0.00 0.00 36.74 3.24
99 100 5.941788 AGACTGTAAAATGGTGGAACTCTT 58.058 37.500 0.00 0.00 36.74 2.85
100 101 5.765182 AGACTGTAAAATGGTGGAACTCTTG 59.235 40.000 0.00 0.00 36.74 3.02
101 102 4.278419 ACTGTAAAATGGTGGAACTCTTGC 59.722 41.667 0.00 0.00 36.74 4.01
102 103 4.469657 TGTAAAATGGTGGAACTCTTGCT 58.530 39.130 0.00 0.00 36.74 3.91
103 104 4.892934 TGTAAAATGGTGGAACTCTTGCTT 59.107 37.500 0.00 0.00 36.74 3.91
104 105 4.326504 AAAATGGTGGAACTCTTGCTTG 57.673 40.909 0.00 0.00 36.74 4.01
105 106 1.251251 ATGGTGGAACTCTTGCTTGC 58.749 50.000 0.00 0.00 36.74 4.01
106 107 0.106769 TGGTGGAACTCTTGCTTGCA 60.107 50.000 0.00 0.00 36.74 4.08
107 108 1.032014 GGTGGAACTCTTGCTTGCAA 58.968 50.000 7.83 7.83 36.74 4.08
108 109 1.408702 GGTGGAACTCTTGCTTGCAAA 59.591 47.619 9.39 0.83 36.74 3.68
109 110 2.159114 GGTGGAACTCTTGCTTGCAAAA 60.159 45.455 9.39 0.00 36.74 2.44
110 111 3.118542 GTGGAACTCTTGCTTGCAAAAG 58.881 45.455 9.39 8.20 0.00 2.27
111 112 2.101249 TGGAACTCTTGCTTGCAAAAGG 59.899 45.455 12.48 6.88 0.00 3.11
112 113 2.362077 GGAACTCTTGCTTGCAAAAGGA 59.638 45.455 12.48 4.98 0.00 3.36
113 114 3.551659 GGAACTCTTGCTTGCAAAAGGAG 60.552 47.826 12.48 15.43 0.00 3.69
114 115 2.659428 ACTCTTGCTTGCAAAAGGAGT 58.341 42.857 16.43 16.43 0.00 3.85
115 116 3.026694 ACTCTTGCTTGCAAAAGGAGTT 58.973 40.909 16.43 5.85 0.00 3.01
116 117 3.448660 ACTCTTGCTTGCAAAAGGAGTTT 59.551 39.130 16.43 1.35 0.00 2.66
117 118 4.045636 TCTTGCTTGCAAAAGGAGTTTC 57.954 40.909 9.39 0.00 0.00 2.78
118 119 3.701040 TCTTGCTTGCAAAAGGAGTTTCT 59.299 39.130 9.39 0.00 0.00 2.52
119 120 3.441496 TGCTTGCAAAAGGAGTTTCTG 57.559 42.857 0.00 0.00 0.00 3.02
120 121 2.760092 TGCTTGCAAAAGGAGTTTCTGT 59.240 40.909 0.00 0.00 0.00 3.41
121 122 3.195396 TGCTTGCAAAAGGAGTTTCTGTT 59.805 39.130 0.00 0.00 0.00 3.16
122 123 3.553105 GCTTGCAAAAGGAGTTTCTGTTG 59.447 43.478 0.00 0.00 35.60 3.33
123 124 4.677779 GCTTGCAAAAGGAGTTTCTGTTGA 60.678 41.667 0.00 0.00 34.69 3.18
124 125 4.370364 TGCAAAAGGAGTTTCTGTTGAC 57.630 40.909 0.00 0.00 34.69 3.18
125 126 3.130340 TGCAAAAGGAGTTTCTGTTGACC 59.870 43.478 0.00 0.00 34.69 4.02
126 127 3.490933 GCAAAAGGAGTTTCTGTTGACCC 60.491 47.826 0.00 0.00 34.69 4.46
127 128 3.662759 AAAGGAGTTTCTGTTGACCCA 57.337 42.857 0.00 0.00 0.00 4.51
128 129 2.938956 AGGAGTTTCTGTTGACCCAG 57.061 50.000 0.00 0.00 0.00 4.45
129 130 2.127708 AGGAGTTTCTGTTGACCCAGT 58.872 47.619 0.00 0.00 34.02 4.00
130 131 3.314693 AGGAGTTTCTGTTGACCCAGTA 58.685 45.455 0.00 0.00 34.02 2.74
131 132 3.910627 AGGAGTTTCTGTTGACCCAGTAT 59.089 43.478 0.00 0.00 34.02 2.12
132 133 4.020128 AGGAGTTTCTGTTGACCCAGTATC 60.020 45.833 0.00 0.00 34.02 2.24
133 134 4.020128 GGAGTTTCTGTTGACCCAGTATCT 60.020 45.833 0.00 0.00 34.02 1.98
134 135 5.513267 GGAGTTTCTGTTGACCCAGTATCTT 60.513 44.000 0.00 0.00 34.02 2.40
135 136 5.941788 AGTTTCTGTTGACCCAGTATCTTT 58.058 37.500 0.00 0.00 34.02 2.52
136 137 6.365520 AGTTTCTGTTGACCCAGTATCTTTT 58.634 36.000 0.00 0.00 34.02 2.27
137 138 6.263168 AGTTTCTGTTGACCCAGTATCTTTTG 59.737 38.462 0.00 0.00 34.02 2.44
138 139 5.560722 TCTGTTGACCCAGTATCTTTTGA 57.439 39.130 0.00 0.00 34.02 2.69
139 140 5.935945 TCTGTTGACCCAGTATCTTTTGAA 58.064 37.500 0.00 0.00 34.02 2.69
140 141 5.997746 TCTGTTGACCCAGTATCTTTTGAAG 59.002 40.000 0.00 0.00 34.02 3.02
141 142 5.070001 TGTTGACCCAGTATCTTTTGAAGG 58.930 41.667 0.00 0.00 0.00 3.46
142 143 4.301072 TGACCCAGTATCTTTTGAAGGG 57.699 45.455 0.00 0.00 36.81 3.95
143 144 3.913799 TGACCCAGTATCTTTTGAAGGGA 59.086 43.478 0.00 0.00 35.60 4.20
144 145 4.262617 GACCCAGTATCTTTTGAAGGGAC 58.737 47.826 0.00 0.00 35.60 4.46
145 146 3.655777 ACCCAGTATCTTTTGAAGGGACA 59.344 43.478 0.00 0.00 35.60 4.02
146 147 4.010349 CCCAGTATCTTTTGAAGGGACAC 58.990 47.826 0.00 0.00 34.40 3.67
147 148 4.010349 CCAGTATCTTTTGAAGGGACACC 58.990 47.826 0.00 0.00 0.00 4.16
148 149 4.506625 CCAGTATCTTTTGAAGGGACACCA 60.507 45.833 0.00 0.00 40.13 4.17
149 150 4.455877 CAGTATCTTTTGAAGGGACACCAC 59.544 45.833 0.00 0.00 40.13 4.16
150 151 3.884037 ATCTTTTGAAGGGACACCACT 57.116 42.857 0.00 0.00 40.13 4.00
151 152 2.930950 TCTTTTGAAGGGACACCACTG 58.069 47.619 0.00 0.00 40.13 3.66
152 153 2.241176 TCTTTTGAAGGGACACCACTGT 59.759 45.455 0.00 0.00 40.13 3.55
153 154 3.456644 TCTTTTGAAGGGACACCACTGTA 59.543 43.478 0.00 0.00 40.13 2.74
154 155 4.104102 TCTTTTGAAGGGACACCACTGTAT 59.896 41.667 0.00 0.00 40.13 2.29
155 156 3.417069 TTGAAGGGACACCACTGTATG 57.583 47.619 0.00 0.00 40.13 2.39
156 157 1.003118 TGAAGGGACACCACTGTATGC 59.997 52.381 0.00 0.00 40.13 3.14
157 158 0.328258 AAGGGACACCACTGTATGCC 59.672 55.000 0.00 0.00 40.13 4.40
158 159 1.449601 GGGACACCACTGTATGCCG 60.450 63.158 0.00 0.00 36.50 5.69
159 160 2.106683 GGACACCACTGTATGCCGC 61.107 63.158 0.00 0.00 0.00 6.53
160 161 1.079127 GACACCACTGTATGCCGCT 60.079 57.895 0.00 0.00 0.00 5.52
161 162 1.361668 GACACCACTGTATGCCGCTG 61.362 60.000 0.00 0.00 0.00 5.18
162 163 2.436646 ACCACTGTATGCCGCTGC 60.437 61.111 0.00 0.00 38.26 5.25
163 164 3.204827 CCACTGTATGCCGCTGCC 61.205 66.667 0.00 0.00 36.33 4.85
164 165 2.124983 CACTGTATGCCGCTGCCT 60.125 61.111 0.00 0.00 36.33 4.75
165 166 1.746615 CACTGTATGCCGCTGCCTT 60.747 57.895 0.00 0.00 36.33 4.35
166 167 1.746615 ACTGTATGCCGCTGCCTTG 60.747 57.895 0.00 0.00 36.33 3.61
167 168 2.438254 TGTATGCCGCTGCCTTGG 60.438 61.111 0.00 0.00 36.33 3.61
168 169 2.124736 GTATGCCGCTGCCTTGGA 60.125 61.111 0.00 0.00 36.33 3.53
169 170 1.748879 GTATGCCGCTGCCTTGGAA 60.749 57.895 0.00 0.00 36.33 3.53
170 171 1.451927 TATGCCGCTGCCTTGGAAG 60.452 57.895 0.00 0.00 36.33 3.46
180 181 3.909587 CCTTGGAAGGGCATGATGA 57.090 52.632 0.00 0.00 42.66 2.92
181 182 2.148446 CCTTGGAAGGGCATGATGAA 57.852 50.000 0.00 0.00 42.66 2.57
182 183 2.459644 CCTTGGAAGGGCATGATGAAA 58.540 47.619 0.00 0.00 42.66 2.69
183 184 3.036091 CCTTGGAAGGGCATGATGAAAT 58.964 45.455 0.00 0.00 42.66 2.17
184 185 3.453353 CCTTGGAAGGGCATGATGAAATT 59.547 43.478 0.00 0.00 42.66 1.82
185 186 4.650588 CCTTGGAAGGGCATGATGAAATTA 59.349 41.667 0.00 0.00 42.66 1.40
186 187 5.306160 CCTTGGAAGGGCATGATGAAATTAT 59.694 40.000 0.00 0.00 42.66 1.28
187 188 5.794726 TGGAAGGGCATGATGAAATTATG 57.205 39.130 0.00 0.00 42.66 1.90
201 202 9.281371 TGATGAAATTATGCAAATTTTGTTGGA 57.719 25.926 15.81 0.00 33.05 3.53
202 203 9.763465 GATGAAATTATGCAAATTTTGTTGGAG 57.237 29.630 15.81 0.00 31.94 3.86
203 204 8.899427 TGAAATTATGCAAATTTTGTTGGAGA 57.101 26.923 15.81 0.00 31.94 3.71
204 205 9.334947 TGAAATTATGCAAATTTTGTTGGAGAA 57.665 25.926 15.81 0.00 35.06 2.87
205 206 9.597999 GAAATTATGCAAATTTTGTTGGAGAAC 57.402 29.630 15.81 0.00 33.70 3.01
206 207 8.674263 AATTATGCAAATTTTGTTGGAGAACA 57.326 26.923 10.65 0.00 40.45 3.18
215 216 2.539003 TTGGAGAACAACGCGGATG 58.461 52.632 12.47 12.16 33.18 3.51
216 217 0.250124 TTGGAGAACAACGCGGATGT 60.250 50.000 12.47 12.91 33.18 3.06
217 218 0.604073 TGGAGAACAACGCGGATGTA 59.396 50.000 18.24 2.04 0.00 2.29
218 219 1.278238 GGAGAACAACGCGGATGTAG 58.722 55.000 18.24 0.77 0.00 2.74
219 220 1.278238 GAGAACAACGCGGATGTAGG 58.722 55.000 18.24 0.00 0.00 3.18
220 221 0.606604 AGAACAACGCGGATGTAGGT 59.393 50.000 18.24 5.16 0.00 3.08
221 222 1.001633 AGAACAACGCGGATGTAGGTT 59.998 47.619 18.24 7.86 0.00 3.50
222 223 1.802365 GAACAACGCGGATGTAGGTTT 59.198 47.619 18.24 4.49 0.00 3.27
223 224 2.747396 ACAACGCGGATGTAGGTTTA 57.253 45.000 16.75 0.00 0.00 2.01
224 225 3.042871 ACAACGCGGATGTAGGTTTAA 57.957 42.857 16.75 0.00 0.00 1.52
225 226 2.738314 ACAACGCGGATGTAGGTTTAAC 59.262 45.455 16.75 0.00 0.00 2.01
226 227 2.737783 CAACGCGGATGTAGGTTTAACA 59.262 45.455 12.47 0.00 0.00 2.41
227 228 3.042871 ACGCGGATGTAGGTTTAACAA 57.957 42.857 12.47 0.00 0.00 2.83
228 229 2.738314 ACGCGGATGTAGGTTTAACAAC 59.262 45.455 12.47 0.00 0.00 3.32
229 230 2.737783 CGCGGATGTAGGTTTAACAACA 59.262 45.455 0.00 5.27 34.15 3.33
230 231 3.372822 CGCGGATGTAGGTTTAACAACAT 59.627 43.478 12.86 12.86 35.34 2.71
231 232 4.567558 CGCGGATGTAGGTTTAACAACATA 59.432 41.667 12.94 0.00 32.87 2.29
232 233 5.501252 CGCGGATGTAGGTTTAACAACATAC 60.501 44.000 12.94 12.62 46.11 2.39
233 234 5.583457 GCGGATGTAGGTTTAACAACATACT 59.417 40.000 17.21 0.68 46.10 2.12
234 235 6.757947 GCGGATGTAGGTTTAACAACATACTA 59.242 38.462 17.21 0.00 46.10 1.82
235 236 7.440255 GCGGATGTAGGTTTAACAACATACTAT 59.560 37.037 17.21 4.07 46.10 2.12
236 237 9.321562 CGGATGTAGGTTTAACAACATACTATT 57.678 33.333 17.21 0.00 46.10 1.73
252 253 8.904099 ACATACTATTTCCTACTAATTGTGCC 57.096 34.615 0.00 0.00 0.00 5.01
253 254 8.714906 ACATACTATTTCCTACTAATTGTGCCT 58.285 33.333 0.00 0.00 0.00 4.75
256 257 7.217906 ACTATTTCCTACTAATTGTGCCTAGC 58.782 38.462 0.00 0.00 0.00 3.42
257 258 3.728076 TCCTACTAATTGTGCCTAGCG 57.272 47.619 0.00 0.00 0.00 4.26
258 259 2.364324 TCCTACTAATTGTGCCTAGCGG 59.636 50.000 0.00 0.00 0.00 5.52
270 271 2.480224 CCTAGCGGCATTGTTTCATG 57.520 50.000 1.45 0.00 0.00 3.07
271 272 1.745087 CCTAGCGGCATTGTTTCATGT 59.255 47.619 1.45 0.00 0.00 3.21
272 273 2.164219 CCTAGCGGCATTGTTTCATGTT 59.836 45.455 1.45 0.00 0.00 2.71
273 274 2.818130 AGCGGCATTGTTTCATGTTT 57.182 40.000 1.45 0.00 0.00 2.83
274 275 2.676076 AGCGGCATTGTTTCATGTTTC 58.324 42.857 1.45 0.00 0.00 2.78
275 276 2.035704 AGCGGCATTGTTTCATGTTTCA 59.964 40.909 1.45 0.00 0.00 2.69
276 277 2.995258 GCGGCATTGTTTCATGTTTCAT 59.005 40.909 0.00 0.00 0.00 2.57
277 278 3.432933 GCGGCATTGTTTCATGTTTCATT 59.567 39.130 0.00 0.00 0.00 2.57
278 279 4.667161 GCGGCATTGTTTCATGTTTCATTG 60.667 41.667 0.00 0.00 0.00 2.82
279 280 4.143073 CGGCATTGTTTCATGTTTCATTGG 60.143 41.667 0.00 0.00 0.00 3.16
280 281 4.756135 GGCATTGTTTCATGTTTCATTGGT 59.244 37.500 0.00 0.00 0.00 3.67
281 282 5.239087 GGCATTGTTTCATGTTTCATTGGTT 59.761 36.000 0.00 0.00 0.00 3.67
282 283 6.238703 GGCATTGTTTCATGTTTCATTGGTTT 60.239 34.615 0.00 0.00 0.00 3.27
283 284 6.633634 GCATTGTTTCATGTTTCATTGGTTTG 59.366 34.615 0.00 0.00 0.00 2.93
284 285 6.674694 TTGTTTCATGTTTCATTGGTTTGG 57.325 33.333 0.00 0.00 0.00 3.28
285 286 4.574013 TGTTTCATGTTTCATTGGTTTGGC 59.426 37.500 0.00 0.00 0.00 4.52
286 287 4.686191 TTCATGTTTCATTGGTTTGGCT 57.314 36.364 0.00 0.00 0.00 4.75
287 288 3.992643 TCATGTTTCATTGGTTTGGCTG 58.007 40.909 0.00 0.00 0.00 4.85
288 289 3.387374 TCATGTTTCATTGGTTTGGCTGT 59.613 39.130 0.00 0.00 0.00 4.40
289 290 3.902881 TGTTTCATTGGTTTGGCTGTT 57.097 38.095 0.00 0.00 0.00 3.16
290 291 3.529533 TGTTTCATTGGTTTGGCTGTTG 58.470 40.909 0.00 0.00 0.00 3.33
291 292 3.055530 TGTTTCATTGGTTTGGCTGTTGT 60.056 39.130 0.00 0.00 0.00 3.32
292 293 2.886862 TCATTGGTTTGGCTGTTGTG 57.113 45.000 0.00 0.00 0.00 3.33
293 294 2.106566 TCATTGGTTTGGCTGTTGTGT 58.893 42.857 0.00 0.00 0.00 3.72
294 295 2.499289 TCATTGGTTTGGCTGTTGTGTT 59.501 40.909 0.00 0.00 0.00 3.32
295 296 2.376808 TTGGTTTGGCTGTTGTGTTG 57.623 45.000 0.00 0.00 0.00 3.33
296 297 1.550327 TGGTTTGGCTGTTGTGTTGA 58.450 45.000 0.00 0.00 0.00 3.18
297 298 1.476085 TGGTTTGGCTGTTGTGTTGAG 59.524 47.619 0.00 0.00 0.00 3.02
298 299 1.476488 GGTTTGGCTGTTGTGTTGAGT 59.524 47.619 0.00 0.00 0.00 3.41
299 300 2.479560 GGTTTGGCTGTTGTGTTGAGTC 60.480 50.000 0.00 0.00 0.00 3.36
300 301 1.388547 TTGGCTGTTGTGTTGAGTCC 58.611 50.000 0.00 0.00 0.00 3.85
301 302 0.813610 TGGCTGTTGTGTTGAGTCCG 60.814 55.000 0.00 0.00 0.00 4.79
302 303 1.279840 GCTGTTGTGTTGAGTCCGC 59.720 57.895 0.00 0.00 0.00 5.54
303 304 1.160329 GCTGTTGTGTTGAGTCCGCT 61.160 55.000 0.00 0.00 0.00 5.52
304 305 1.299541 CTGTTGTGTTGAGTCCGCTT 58.700 50.000 0.00 0.00 0.00 4.68
305 306 1.670811 CTGTTGTGTTGAGTCCGCTTT 59.329 47.619 0.00 0.00 0.00 3.51
306 307 2.869801 CTGTTGTGTTGAGTCCGCTTTA 59.130 45.455 0.00 0.00 0.00 1.85
307 308 2.610374 TGTTGTGTTGAGTCCGCTTTAC 59.390 45.455 0.00 0.00 0.00 2.01
308 309 2.870411 GTTGTGTTGAGTCCGCTTTACT 59.130 45.455 0.00 0.00 0.00 2.24
309 310 2.479837 TGTGTTGAGTCCGCTTTACTG 58.520 47.619 0.00 0.00 0.00 2.74
310 311 1.194772 GTGTTGAGTCCGCTTTACTGC 59.805 52.381 0.00 0.00 0.00 4.40
311 312 1.070134 TGTTGAGTCCGCTTTACTGCT 59.930 47.619 0.00 0.00 0.00 4.24
312 313 2.143925 GTTGAGTCCGCTTTACTGCTT 58.856 47.619 0.00 0.00 0.00 3.91
313 314 2.543777 TGAGTCCGCTTTACTGCTTT 57.456 45.000 0.00 0.00 0.00 3.51
314 315 2.846193 TGAGTCCGCTTTACTGCTTTT 58.154 42.857 0.00 0.00 0.00 2.27
315 316 2.806244 TGAGTCCGCTTTACTGCTTTTC 59.194 45.455 0.00 0.00 0.00 2.29
316 317 3.067833 GAGTCCGCTTTACTGCTTTTCT 58.932 45.455 0.00 0.00 0.00 2.52
317 318 3.477530 AGTCCGCTTTACTGCTTTTCTT 58.522 40.909 0.00 0.00 0.00 2.52
318 319 3.498777 AGTCCGCTTTACTGCTTTTCTTC 59.501 43.478 0.00 0.00 0.00 2.87
319 320 3.250040 GTCCGCTTTACTGCTTTTCTTCA 59.750 43.478 0.00 0.00 0.00 3.02
320 321 3.880490 TCCGCTTTACTGCTTTTCTTCAA 59.120 39.130 0.00 0.00 0.00 2.69
321 322 3.975035 CCGCTTTACTGCTTTTCTTCAAC 59.025 43.478 0.00 0.00 0.00 3.18
322 323 4.497340 CCGCTTTACTGCTTTTCTTCAACA 60.497 41.667 0.00 0.00 0.00 3.33
323 324 4.672413 CGCTTTACTGCTTTTCTTCAACAG 59.328 41.667 0.00 0.00 0.00 3.16
324 325 5.582550 GCTTTACTGCTTTTCTTCAACAGT 58.417 37.500 0.00 0.00 43.60 3.55
325 326 6.036470 GCTTTACTGCTTTTCTTCAACAGTT 58.964 36.000 0.00 0.00 41.56 3.16
326 327 6.020360 GCTTTACTGCTTTTCTTCAACAGTTG 60.020 38.462 6.99 6.99 41.56 3.16
327 328 6.509418 TTACTGCTTTTCTTCAACAGTTGT 57.491 33.333 13.14 0.00 41.56 3.32
328 329 4.737054 ACTGCTTTTCTTCAACAGTTGTG 58.263 39.130 13.14 7.76 38.38 3.33
329 330 4.458989 ACTGCTTTTCTTCAACAGTTGTGA 59.541 37.500 13.14 9.82 38.38 3.58
330 331 5.048083 ACTGCTTTTCTTCAACAGTTGTGAA 60.048 36.000 13.14 14.55 38.38 3.18
331 332 5.401550 TGCTTTTCTTCAACAGTTGTGAAG 58.598 37.500 13.14 10.44 40.07 3.02
332 333 5.048083 TGCTTTTCTTCAACAGTTGTGAAGT 60.048 36.000 13.14 0.00 39.78 3.01
333 334 5.513141 GCTTTTCTTCAACAGTTGTGAAGTC 59.487 40.000 13.14 8.05 39.78 3.01
334 335 6.623767 GCTTTTCTTCAACAGTTGTGAAGTCT 60.624 38.462 13.14 0.00 39.78 3.24
335 336 5.801350 TTCTTCAACAGTTGTGAAGTCTG 57.199 39.130 13.14 0.00 39.78 3.51
336 337 5.084818 TCTTCAACAGTTGTGAAGTCTGA 57.915 39.130 13.14 2.71 39.78 3.27
337 338 5.111989 TCTTCAACAGTTGTGAAGTCTGAG 58.888 41.667 13.14 0.35 39.78 3.35
338 339 3.198068 TCAACAGTTGTGAAGTCTGAGC 58.802 45.455 13.14 0.00 33.93 4.26
339 340 1.858091 ACAGTTGTGAAGTCTGAGCG 58.142 50.000 0.00 0.00 33.93 5.03
340 341 0.510359 CAGTTGTGAAGTCTGAGCGC 59.490 55.000 0.00 0.00 0.00 5.92
341 342 0.104855 AGTTGTGAAGTCTGAGCGCA 59.895 50.000 11.47 0.00 0.00 6.09
342 343 0.937304 GTTGTGAAGTCTGAGCGCAA 59.063 50.000 11.47 0.00 0.00 4.85
343 344 1.532868 GTTGTGAAGTCTGAGCGCAAT 59.467 47.619 11.47 0.00 34.94 3.56
344 345 1.882912 TGTGAAGTCTGAGCGCAATT 58.117 45.000 11.47 0.00 0.00 2.32
345 346 3.038788 TGTGAAGTCTGAGCGCAATTA 57.961 42.857 11.47 0.00 0.00 1.40
346 347 2.736721 TGTGAAGTCTGAGCGCAATTAC 59.263 45.455 11.47 2.07 0.00 1.89
347 348 2.094417 GTGAAGTCTGAGCGCAATTACC 59.906 50.000 11.47 0.00 0.00 2.85
348 349 2.028112 TGAAGTCTGAGCGCAATTACCT 60.028 45.455 11.47 0.00 0.00 3.08
349 350 3.194755 TGAAGTCTGAGCGCAATTACCTA 59.805 43.478 11.47 0.00 0.00 3.08
350 351 3.887621 AGTCTGAGCGCAATTACCTAA 57.112 42.857 11.47 0.00 0.00 2.69
351 352 4.202245 AGTCTGAGCGCAATTACCTAAA 57.798 40.909 11.47 0.00 0.00 1.85
352 353 4.770795 AGTCTGAGCGCAATTACCTAAAT 58.229 39.130 11.47 0.00 0.00 1.40
353 354 5.186198 AGTCTGAGCGCAATTACCTAAATT 58.814 37.500 11.47 0.00 38.36 1.82
354 355 6.346096 AGTCTGAGCGCAATTACCTAAATTA 58.654 36.000 11.47 0.00 35.54 1.40
355 356 6.992715 AGTCTGAGCGCAATTACCTAAATTAT 59.007 34.615 11.47 0.00 35.54 1.28
356 357 8.148351 AGTCTGAGCGCAATTACCTAAATTATA 58.852 33.333 11.47 0.00 35.54 0.98
357 358 8.221766 GTCTGAGCGCAATTACCTAAATTATAC 58.778 37.037 11.47 0.00 35.54 1.47
358 359 7.929245 TCTGAGCGCAATTACCTAAATTATACA 59.071 33.333 11.47 0.00 35.54 2.29
359 360 8.615878 TGAGCGCAATTACCTAAATTATACAT 57.384 30.769 11.47 0.00 35.54 2.29
360 361 9.062524 TGAGCGCAATTACCTAAATTATACATT 57.937 29.630 11.47 0.00 35.54 2.71
361 362 9.893305 GAGCGCAATTACCTAAATTATACATTT 57.107 29.630 11.47 0.00 35.54 2.32
362 363 9.893305 AGCGCAATTACCTAAATTATACATTTC 57.107 29.630 11.47 0.00 35.54 2.17
363 364 9.893305 GCGCAATTACCTAAATTATACATTTCT 57.107 29.630 0.30 0.00 35.54 2.52
406 407 4.653806 GCTTTGTAGCAGTGACTAAGTG 57.346 45.455 0.00 0.00 46.95 3.16
414 415 3.932545 CAGTGACTAAGTGCTCTCTGT 57.067 47.619 0.00 0.00 0.00 3.41
415 416 4.250116 CAGTGACTAAGTGCTCTCTGTT 57.750 45.455 0.00 0.00 0.00 3.16
416 417 5.378292 CAGTGACTAAGTGCTCTCTGTTA 57.622 43.478 0.00 0.00 0.00 2.41
417 418 5.773575 CAGTGACTAAGTGCTCTCTGTTAA 58.226 41.667 0.00 0.00 0.00 2.01
418 419 5.631512 CAGTGACTAAGTGCTCTCTGTTAAC 59.368 44.000 0.00 0.00 0.00 2.01
419 420 5.536916 AGTGACTAAGTGCTCTCTGTTAACT 59.463 40.000 7.22 0.00 0.00 2.24
420 421 6.041069 AGTGACTAAGTGCTCTCTGTTAACTT 59.959 38.462 7.22 0.00 35.39 2.66
421 422 6.702282 GTGACTAAGTGCTCTCTGTTAACTTT 59.298 38.462 7.22 0.00 33.37 2.66
422 423 7.224949 GTGACTAAGTGCTCTCTGTTAACTTTT 59.775 37.037 7.22 0.00 33.37 2.27
423 424 7.438459 TGACTAAGTGCTCTCTGTTAACTTTTC 59.562 37.037 7.22 0.00 33.37 2.29
424 425 7.501844 ACTAAGTGCTCTCTGTTAACTTTTCT 58.498 34.615 7.22 0.00 33.37 2.52
425 426 7.988028 ACTAAGTGCTCTCTGTTAACTTTTCTT 59.012 33.333 7.22 4.12 33.37 2.52
426 427 7.631717 AAGTGCTCTCTGTTAACTTTTCTTT 57.368 32.000 7.22 0.00 0.00 2.52
427 428 8.732746 AAGTGCTCTCTGTTAACTTTTCTTTA 57.267 30.769 7.22 0.00 0.00 1.85
428 429 8.732746 AGTGCTCTCTGTTAACTTTTCTTTAA 57.267 30.769 7.22 0.00 0.00 1.52
429 430 8.831550 AGTGCTCTCTGTTAACTTTTCTTTAAG 58.168 33.333 7.22 0.00 0.00 1.85
430 431 8.613482 GTGCTCTCTGTTAACTTTTCTTTAAGT 58.387 33.333 7.22 0.00 39.97 2.24
431 432 9.174166 TGCTCTCTGTTAACTTTTCTTTAAGTT 57.826 29.630 7.22 6.92 46.85 2.66
432 433 9.653067 GCTCTCTGTTAACTTTTCTTTAAGTTC 57.347 33.333 7.22 0.00 43.04 3.01
442 443 8.818622 ACTTTTCTTTAAGTTCTTGTAAGGGT 57.181 30.769 0.00 0.00 34.81 4.34
443 444 8.683615 ACTTTTCTTTAAGTTCTTGTAAGGGTG 58.316 33.333 0.00 0.00 34.81 4.61
444 445 6.628919 TTCTTTAAGTTCTTGTAAGGGTGC 57.371 37.500 0.00 0.00 0.00 5.01
445 446 5.686753 TCTTTAAGTTCTTGTAAGGGTGCA 58.313 37.500 0.00 0.00 0.00 4.57
446 447 6.303839 TCTTTAAGTTCTTGTAAGGGTGCAT 58.696 36.000 0.00 0.00 0.00 3.96
447 448 6.775629 TCTTTAAGTTCTTGTAAGGGTGCATT 59.224 34.615 0.00 0.00 0.00 3.56
448 449 6.569179 TTAAGTTCTTGTAAGGGTGCATTC 57.431 37.500 0.00 0.00 0.00 2.67
449 450 4.373156 AGTTCTTGTAAGGGTGCATTCT 57.627 40.909 0.00 0.00 0.00 2.40
807 820 8.991243 AGACATTAATGAATGATTTTGGTGTG 57.009 30.769 22.16 0.00 44.59 3.82
833 847 2.416202 TCATATCACAGCAAAGCACACG 59.584 45.455 0.00 0.00 0.00 4.49
907 930 2.025589 TTGTGTACAACCGACAGCAA 57.974 45.000 0.00 0.00 0.00 3.91
1058 1128 0.462789 TCGCCCCGTCTATTTCTTCC 59.537 55.000 0.00 0.00 0.00 3.46
1210 1443 0.385390 CAAATAATGGTGGCCCTCGC 59.615 55.000 0.00 0.00 0.00 5.03
1231 1464 1.067776 CGCTCTCTAACCTGGTTCGTT 60.068 52.381 16.75 0.00 0.00 3.85
1242 1475 1.147600 GGTTCGTTGGTGGAGGTGT 59.852 57.895 0.00 0.00 0.00 4.16
1269 1502 0.766674 AGTGCACCACCCTGGAGTAA 60.767 55.000 14.63 0.00 40.96 2.24
1345 1578 1.937223 CACCATTATTTGCGACGCCTA 59.063 47.619 18.69 5.32 0.00 3.93
1389 1622 2.203523 TCCACGTCTTGGGTCCGA 60.204 61.111 0.00 0.00 46.92 4.55
1531 1788 8.776470 GGTGATGAAATTGTGTCAAAATCAAAT 58.224 29.630 0.00 0.00 0.00 2.32
1580 1856 3.969287 ATCTTCTACAGCAGTCAAGCA 57.031 42.857 0.00 0.00 36.85 3.91
1606 1882 3.522553 AGATTGCTAGCTGTTAACGGTC 58.477 45.455 17.23 8.27 0.00 4.79
1662 1938 4.468153 ACAGGAAGAAACTCTGGTATCCTC 59.532 45.833 0.00 0.00 33.19 3.71
1768 2045 1.573932 CGTTCATGGCGTGCTTTCA 59.426 52.632 0.65 0.00 0.00 2.69
1773 2050 1.885233 TCATGGCGTGCTTTCATCAAA 59.115 42.857 0.65 0.00 0.00 2.69
1997 2479 6.183360 GGAGAGAGTGATAAAATCCGAGTTCT 60.183 42.308 0.00 0.00 0.00 3.01
2188 2679 2.093658 ACCAGAACCATCGGTGTCATAC 60.094 50.000 0.00 0.00 35.34 2.39
2198 2689 1.138883 GTGTCATACTCTGCGCCGA 59.861 57.895 4.18 2.10 0.00 5.54
2209 2700 3.062763 CTCTGCGCCGATTGATCTATTT 58.937 45.455 4.18 0.00 0.00 1.40
2336 2848 6.156256 TGAGACTTTAGGGCTAGCTTTGATTA 59.844 38.462 15.72 0.00 30.21 1.75
2339 2851 5.532779 ACTTTAGGGCTAGCTTTGATTATGC 59.467 40.000 15.72 0.00 0.00 3.14
2378 2890 4.226761 CAGCCTTGACCGTTCATTTTAAC 58.773 43.478 0.00 0.00 0.00 2.01
2407 2923 9.162764 GTCATATTTACCAGACAATAGTTGTGT 57.837 33.333 0.00 0.00 45.52 3.72
2496 3012 1.840630 GCATGTGTAGTGTGTGCGCA 61.841 55.000 5.66 5.66 35.58 6.09
2536 3052 2.044053 CCGGTCCATGGCCATGTT 60.044 61.111 37.30 8.41 37.11 2.71
2540 3056 0.034186 GGTCCATGGCCATGTTGAGA 60.034 55.000 37.30 26.55 37.11 3.27
2624 3149 5.153670 AGTAGGCCTAGGTAATTAGTGGT 57.846 43.478 14.38 0.00 0.00 4.16
2640 3166 1.447314 GGTTCACGGGGTGATCGTC 60.447 63.158 0.00 0.00 42.40 4.20
2645 3171 2.052690 ACGGGGTGATCGTCCAGAG 61.053 63.158 10.31 3.64 35.87 3.35
2646 3172 2.052690 CGGGGTGATCGTCCAGAGT 61.053 63.158 8.63 0.00 0.00 3.24
2655 3181 2.746359 GTCCAGAGTGCTGCAGGT 59.254 61.111 17.12 0.00 40.91 4.00
2656 3182 1.670406 GTCCAGAGTGCTGCAGGTG 60.670 63.158 17.12 0.30 40.91 4.00
2657 3183 2.359602 CCAGAGTGCTGCAGGTGG 60.360 66.667 17.12 6.52 40.91 4.61
2658 3184 2.429058 CAGAGTGCTGCAGGTGGT 59.571 61.111 17.12 0.00 34.95 4.16
2659 3185 1.964891 CAGAGTGCTGCAGGTGGTG 60.965 63.158 17.12 0.00 34.95 4.17
2660 3186 2.670934 GAGTGCTGCAGGTGGTGG 60.671 66.667 17.12 0.00 0.00 4.61
2661 3187 3.170672 AGTGCTGCAGGTGGTGGA 61.171 61.111 17.12 0.00 0.00 4.02
2671 3197 2.734591 GTGGTGGACACGAGCAGA 59.265 61.111 0.00 0.00 40.85 4.26
2684 3210 2.733218 GCAGAGCGTGTACGTGCA 60.733 61.111 0.82 0.82 42.22 4.57
2693 3219 0.601576 GTGTACGTGCATGTGGTGGA 60.602 55.000 21.92 0.00 0.00 4.02
2748 3274 1.760875 TAGGAGGCGTGGGGATCAC 60.761 63.158 0.00 0.00 42.74 3.06
2802 3332 3.334691 CCTTTGCCGAGTATTGTTCTCA 58.665 45.455 0.00 0.00 32.79 3.27
2827 3357 2.208527 GGGTACTCAGCCCGATTCA 58.791 57.895 0.00 0.00 36.30 2.57
2856 3387 1.594331 AGTTGAGTTTGCCGAGAACC 58.406 50.000 0.00 0.00 0.00 3.62
2857 3388 1.134220 AGTTGAGTTTGCCGAGAACCA 60.134 47.619 0.00 0.00 0.00 3.67
2858 3389 1.673920 GTTGAGTTTGCCGAGAACCAA 59.326 47.619 0.00 0.00 0.00 3.67
2884 3415 1.157585 GGGACTCGGCAAAGTCTTTC 58.842 55.000 14.99 2.14 44.21 2.62
2891 3422 1.876416 CGGCAAAGTCTTTCCCGAGAA 60.876 52.381 21.02 0.00 41.34 2.87
2898 3429 6.294010 GCAAAGTCTTTCCCGAGAACTAAAAT 60.294 38.462 0.00 0.00 0.00 1.82
2906 3437 3.632145 CCCGAGAACTAAAATGGGGATTG 59.368 47.826 0.00 0.00 35.16 2.67
2907 3438 3.632145 CCGAGAACTAAAATGGGGATTGG 59.368 47.826 0.00 0.00 0.00 3.16
2908 3439 3.632145 CGAGAACTAAAATGGGGATTGGG 59.368 47.826 0.00 0.00 0.00 4.12
3014 3552 2.292845 GCTAAGATGAAAGCCCATGAGC 59.707 50.000 0.00 0.00 32.40 4.26
3019 3557 0.324614 TGAAAGCCCATGAGCGAGAA 59.675 50.000 0.00 0.00 38.01 2.87
3045 3583 5.337554 GTCGGCACAATTATTTAGTTTCCC 58.662 41.667 0.00 0.00 0.00 3.97
3124 3690 1.282875 GCGACCTGTTTGCCAAGAC 59.717 57.895 0.00 0.00 0.00 3.01
3166 3732 6.479660 GTCAAAGAAATGAACCATGCTTTCAA 59.520 34.615 10.91 0.00 36.57 2.69
3177 3743 3.571401 CCATGCTTTCAAAGAAGGACACT 59.429 43.478 0.00 0.00 29.50 3.55
3203 3769 3.673746 TTTTCGCTGAGTTGTGTTCTG 57.326 42.857 0.00 0.00 0.00 3.02
3249 3815 4.651994 CAAACTCGGCAAAGATATGTCAC 58.348 43.478 0.00 0.00 0.00 3.67
3258 3824 5.517770 GGCAAAGATATGTCACATTTTCTGC 59.482 40.000 0.00 1.38 0.00 4.26
3319 3887 3.054802 ACACAGCAAAATTTTGTCCCCAA 60.055 39.130 27.13 0.00 40.24 4.12
3321 3889 4.579753 CACAGCAAAATTTTGTCCCCAAAT 59.420 37.500 27.13 6.72 40.14 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.327924 AACTGATTGCGTGATGGGGA 59.672 50.000 0.00 0.00 0.00 4.81
1 2 0.734889 GAACTGATTGCGTGATGGGG 59.265 55.000 0.00 0.00 0.00 4.96
2 3 1.742761 AGAACTGATTGCGTGATGGG 58.257 50.000 0.00 0.00 0.00 4.00
3 4 3.525537 AGTAGAACTGATTGCGTGATGG 58.474 45.455 0.00 0.00 0.00 3.51
4 5 5.106948 ACAAAGTAGAACTGATTGCGTGATG 60.107 40.000 0.00 0.00 0.00 3.07
5 6 4.997395 ACAAAGTAGAACTGATTGCGTGAT 59.003 37.500 0.00 0.00 0.00 3.06
6 7 4.377021 ACAAAGTAGAACTGATTGCGTGA 58.623 39.130 0.00 0.00 0.00 4.35
7 8 4.732285 ACAAAGTAGAACTGATTGCGTG 57.268 40.909 0.00 0.00 0.00 5.34
8 9 5.539048 ACTACAAAGTAGAACTGATTGCGT 58.461 37.500 10.87 0.00 32.84 5.24
9 10 7.576750 TTACTACAAAGTAGAACTGATTGCG 57.423 36.000 10.87 0.00 39.36 4.85
42 43 9.354673 ACAGGAAAAAGATGAAAAGAGAATACA 57.645 29.630 0.00 0.00 0.00 2.29
45 46 9.579932 AGTACAGGAAAAAGATGAAAAGAGAAT 57.420 29.630 0.00 0.00 0.00 2.40
46 47 8.980481 AGTACAGGAAAAAGATGAAAAGAGAA 57.020 30.769 0.00 0.00 0.00 2.87
47 48 8.980481 AAGTACAGGAAAAAGATGAAAAGAGA 57.020 30.769 0.00 0.00 0.00 3.10
49 50 9.284968 CCTAAGTACAGGAAAAAGATGAAAAGA 57.715 33.333 0.00 0.00 38.00 2.52
50 51 9.284968 TCCTAAGTACAGGAAAAAGATGAAAAG 57.715 33.333 0.00 0.00 41.88 2.27
51 52 9.284968 CTCCTAAGTACAGGAAAAAGATGAAAA 57.715 33.333 3.71 0.00 44.18 2.29
52 53 8.656806 TCTCCTAAGTACAGGAAAAAGATGAAA 58.343 33.333 3.71 0.00 44.18 2.69
53 54 8.095169 GTCTCCTAAGTACAGGAAAAAGATGAA 58.905 37.037 3.71 0.00 44.18 2.57
54 55 7.455008 AGTCTCCTAAGTACAGGAAAAAGATGA 59.545 37.037 3.71 0.00 44.18 2.92
55 56 7.547370 CAGTCTCCTAAGTACAGGAAAAAGATG 59.453 40.741 3.71 0.00 44.18 2.90
56 57 7.235812 ACAGTCTCCTAAGTACAGGAAAAAGAT 59.764 37.037 3.71 0.00 44.18 2.40
57 58 6.553852 ACAGTCTCCTAAGTACAGGAAAAAGA 59.446 38.462 3.71 0.00 44.18 2.52
58 59 6.760291 ACAGTCTCCTAAGTACAGGAAAAAG 58.240 40.000 3.71 0.00 44.18 2.27
59 60 6.742559 ACAGTCTCCTAAGTACAGGAAAAA 57.257 37.500 3.71 0.00 44.18 1.94
60 61 7.844493 TTACAGTCTCCTAAGTACAGGAAAA 57.156 36.000 3.71 0.00 44.18 2.29
61 62 7.844493 TTTACAGTCTCCTAAGTACAGGAAA 57.156 36.000 3.71 0.00 44.18 3.13
62 63 7.844493 TTTTACAGTCTCCTAAGTACAGGAA 57.156 36.000 3.71 0.00 44.18 3.36
63 64 7.093465 CCATTTTACAGTCTCCTAAGTACAGGA 60.093 40.741 2.20 2.20 42.62 3.86
64 65 7.042335 CCATTTTACAGTCTCCTAAGTACAGG 58.958 42.308 0.00 0.00 37.00 4.00
65 66 7.545965 CACCATTTTACAGTCTCCTAAGTACAG 59.454 40.741 0.00 0.00 0.00 2.74
66 67 7.383687 CACCATTTTACAGTCTCCTAAGTACA 58.616 38.462 0.00 0.00 0.00 2.90
67 68 6.817140 CCACCATTTTACAGTCTCCTAAGTAC 59.183 42.308 0.00 0.00 0.00 2.73
68 69 6.727231 TCCACCATTTTACAGTCTCCTAAGTA 59.273 38.462 0.00 0.00 0.00 2.24
69 70 5.546499 TCCACCATTTTACAGTCTCCTAAGT 59.454 40.000 0.00 0.00 0.00 2.24
70 71 6.049955 TCCACCATTTTACAGTCTCCTAAG 57.950 41.667 0.00 0.00 0.00 2.18
71 72 6.043938 AGTTCCACCATTTTACAGTCTCCTAA 59.956 38.462 0.00 0.00 0.00 2.69
72 73 5.546499 AGTTCCACCATTTTACAGTCTCCTA 59.454 40.000 0.00 0.00 0.00 2.94
73 74 4.351111 AGTTCCACCATTTTACAGTCTCCT 59.649 41.667 0.00 0.00 0.00 3.69
74 75 4.652822 AGTTCCACCATTTTACAGTCTCC 58.347 43.478 0.00 0.00 0.00 3.71
75 76 5.552178 AGAGTTCCACCATTTTACAGTCTC 58.448 41.667 0.00 0.00 0.00 3.36
76 77 5.568620 AGAGTTCCACCATTTTACAGTCT 57.431 39.130 0.00 0.00 0.00 3.24
77 78 5.562890 GCAAGAGTTCCACCATTTTACAGTC 60.563 44.000 0.00 0.00 0.00 3.51
78 79 4.278419 GCAAGAGTTCCACCATTTTACAGT 59.722 41.667 0.00 0.00 0.00 3.55
79 80 4.520492 AGCAAGAGTTCCACCATTTTACAG 59.480 41.667 0.00 0.00 0.00 2.74
80 81 4.469657 AGCAAGAGTTCCACCATTTTACA 58.530 39.130 0.00 0.00 0.00 2.41
81 82 5.222631 CAAGCAAGAGTTCCACCATTTTAC 58.777 41.667 0.00 0.00 0.00 2.01
82 83 4.261994 GCAAGCAAGAGTTCCACCATTTTA 60.262 41.667 0.00 0.00 0.00 1.52
83 84 3.493176 GCAAGCAAGAGTTCCACCATTTT 60.493 43.478 0.00 0.00 0.00 1.82
84 85 2.036346 GCAAGCAAGAGTTCCACCATTT 59.964 45.455 0.00 0.00 0.00 2.32
85 86 1.615392 GCAAGCAAGAGTTCCACCATT 59.385 47.619 0.00 0.00 0.00 3.16
86 87 1.251251 GCAAGCAAGAGTTCCACCAT 58.749 50.000 0.00 0.00 0.00 3.55
87 88 0.106769 TGCAAGCAAGAGTTCCACCA 60.107 50.000 0.00 0.00 0.00 4.17
88 89 1.032014 TTGCAAGCAAGAGTTCCACC 58.968 50.000 2.89 0.00 0.00 4.61
89 90 2.869233 TTTGCAAGCAAGAGTTCCAC 57.131 45.000 7.60 0.00 37.24 4.02
90 91 2.101249 CCTTTTGCAAGCAAGAGTTCCA 59.899 45.455 19.74 0.00 36.70 3.53
91 92 2.362077 TCCTTTTGCAAGCAAGAGTTCC 59.638 45.455 19.74 0.00 36.70 3.62
92 93 3.067320 ACTCCTTTTGCAAGCAAGAGTTC 59.933 43.478 19.74 0.00 36.33 3.01
93 94 3.026694 ACTCCTTTTGCAAGCAAGAGTT 58.973 40.909 19.74 5.44 36.33 3.01
94 95 2.659428 ACTCCTTTTGCAAGCAAGAGT 58.341 42.857 19.74 18.49 36.70 3.24
95 96 3.722728 AACTCCTTTTGCAAGCAAGAG 57.277 42.857 15.95 15.95 37.73 2.85
96 97 3.701040 AGAAACTCCTTTTGCAAGCAAGA 59.299 39.130 11.64 2.71 37.24 3.02
97 98 3.800506 CAGAAACTCCTTTTGCAAGCAAG 59.199 43.478 7.60 1.19 37.24 4.01
98 99 3.195396 ACAGAAACTCCTTTTGCAAGCAA 59.805 39.130 2.89 2.89 0.00 3.91
99 100 2.760092 ACAGAAACTCCTTTTGCAAGCA 59.240 40.909 0.00 0.00 0.00 3.91
100 101 3.443099 ACAGAAACTCCTTTTGCAAGC 57.557 42.857 0.00 0.00 0.00 4.01
101 102 4.800471 GTCAACAGAAACTCCTTTTGCAAG 59.200 41.667 0.00 0.00 0.00 4.01
102 103 4.381505 GGTCAACAGAAACTCCTTTTGCAA 60.382 41.667 0.00 0.00 0.00 4.08
103 104 3.130340 GGTCAACAGAAACTCCTTTTGCA 59.870 43.478 0.00 0.00 0.00 4.08
104 105 3.490933 GGGTCAACAGAAACTCCTTTTGC 60.491 47.826 0.00 0.00 0.00 3.68
105 106 3.699038 TGGGTCAACAGAAACTCCTTTTG 59.301 43.478 0.00 0.00 0.00 2.44
106 107 3.954258 CTGGGTCAACAGAAACTCCTTTT 59.046 43.478 0.00 0.00 40.97 2.27
107 108 3.053619 ACTGGGTCAACAGAAACTCCTTT 60.054 43.478 0.00 0.00 40.97 3.11
108 109 2.509964 ACTGGGTCAACAGAAACTCCTT 59.490 45.455 0.00 0.00 40.97 3.36
109 110 2.127708 ACTGGGTCAACAGAAACTCCT 58.872 47.619 0.00 0.00 40.97 3.69
110 111 2.640316 ACTGGGTCAACAGAAACTCC 57.360 50.000 0.00 0.00 40.97 3.85
111 112 5.153950 AGATACTGGGTCAACAGAAACTC 57.846 43.478 0.00 0.00 40.97 3.01
112 113 5.568620 AAGATACTGGGTCAACAGAAACT 57.431 39.130 0.00 0.00 40.97 2.66
113 114 6.262273 TCAAAAGATACTGGGTCAACAGAAAC 59.738 38.462 0.00 0.00 40.97 2.78
114 115 6.361433 TCAAAAGATACTGGGTCAACAGAAA 58.639 36.000 0.00 0.00 40.97 2.52
115 116 5.935945 TCAAAAGATACTGGGTCAACAGAA 58.064 37.500 0.00 0.00 40.97 3.02
116 117 5.560722 TCAAAAGATACTGGGTCAACAGA 57.439 39.130 0.00 0.00 40.97 3.41
117 118 5.182001 CCTTCAAAAGATACTGGGTCAACAG 59.818 44.000 0.00 0.00 44.03 3.16
118 119 5.070001 CCTTCAAAAGATACTGGGTCAACA 58.930 41.667 0.00 0.00 0.00 3.33
119 120 4.459337 CCCTTCAAAAGATACTGGGTCAAC 59.541 45.833 0.00 0.00 0.00 3.18
120 121 4.352595 TCCCTTCAAAAGATACTGGGTCAA 59.647 41.667 0.00 0.00 35.00 3.18
121 122 3.913799 TCCCTTCAAAAGATACTGGGTCA 59.086 43.478 0.00 0.00 35.00 4.02
122 123 4.262617 GTCCCTTCAAAAGATACTGGGTC 58.737 47.826 0.00 0.00 35.00 4.46
123 124 3.655777 TGTCCCTTCAAAAGATACTGGGT 59.344 43.478 0.00 0.00 35.00 4.51
124 125 4.010349 GTGTCCCTTCAAAAGATACTGGG 58.990 47.826 0.00 0.00 34.76 4.45
125 126 4.010349 GGTGTCCCTTCAAAAGATACTGG 58.990 47.826 0.00 0.00 0.00 4.00
126 127 4.455877 GTGGTGTCCCTTCAAAAGATACTG 59.544 45.833 0.00 0.00 0.00 2.74
127 128 4.351111 AGTGGTGTCCCTTCAAAAGATACT 59.649 41.667 0.00 0.00 0.00 2.12
128 129 4.455877 CAGTGGTGTCCCTTCAAAAGATAC 59.544 45.833 0.00 0.00 0.00 2.24
129 130 4.104102 ACAGTGGTGTCCCTTCAAAAGATA 59.896 41.667 0.00 0.00 26.76 1.98
130 131 3.117512 ACAGTGGTGTCCCTTCAAAAGAT 60.118 43.478 0.00 0.00 26.76 2.40
131 132 2.241176 ACAGTGGTGTCCCTTCAAAAGA 59.759 45.455 0.00 0.00 26.76 2.52
132 133 2.654863 ACAGTGGTGTCCCTTCAAAAG 58.345 47.619 0.00 0.00 26.76 2.27
133 134 2.818751 ACAGTGGTGTCCCTTCAAAA 57.181 45.000 0.00 0.00 26.76 2.44
134 135 3.750371 CATACAGTGGTGTCCCTTCAAA 58.250 45.455 0.00 0.00 38.19 2.69
135 136 2.552155 GCATACAGTGGTGTCCCTTCAA 60.552 50.000 0.00 0.00 38.19 2.69
136 137 1.003118 GCATACAGTGGTGTCCCTTCA 59.997 52.381 0.00 0.00 38.19 3.02
137 138 1.679032 GGCATACAGTGGTGTCCCTTC 60.679 57.143 0.00 0.00 38.19 3.46
138 139 0.328258 GGCATACAGTGGTGTCCCTT 59.672 55.000 0.00 0.00 38.19 3.95
139 140 1.899437 CGGCATACAGTGGTGTCCCT 61.899 60.000 0.00 0.00 38.19 4.20
140 141 1.449601 CGGCATACAGTGGTGTCCC 60.450 63.158 0.00 0.00 38.19 4.46
141 142 2.106683 GCGGCATACAGTGGTGTCC 61.107 63.158 0.00 0.00 38.19 4.02
142 143 1.079127 AGCGGCATACAGTGGTGTC 60.079 57.895 1.45 0.00 38.19 3.67
143 144 1.375908 CAGCGGCATACAGTGGTGT 60.376 57.895 1.45 0.00 41.06 4.16
144 145 2.753966 GCAGCGGCATACAGTGGTG 61.754 63.158 3.18 0.00 40.72 4.17
145 146 2.436646 GCAGCGGCATACAGTGGT 60.437 61.111 3.18 0.00 40.72 4.16
146 147 3.204827 GGCAGCGGCATACAGTGG 61.205 66.667 11.88 0.00 43.71 4.00
147 148 1.746615 AAGGCAGCGGCATACAGTG 60.747 57.895 11.88 0.00 43.71 3.66
148 149 1.746615 CAAGGCAGCGGCATACAGT 60.747 57.895 11.88 0.00 43.71 3.55
149 150 2.475466 CCAAGGCAGCGGCATACAG 61.475 63.158 11.88 0.00 43.71 2.74
150 151 2.438254 CCAAGGCAGCGGCATACA 60.438 61.111 11.88 0.00 43.71 2.29
151 152 1.718757 CTTCCAAGGCAGCGGCATAC 61.719 60.000 11.88 0.00 43.71 2.39
152 153 1.451927 CTTCCAAGGCAGCGGCATA 60.452 57.895 11.88 0.00 43.71 3.14
153 154 2.753043 CTTCCAAGGCAGCGGCAT 60.753 61.111 11.88 0.00 43.71 4.40
162 163 2.148446 TTCATCATGCCCTTCCAAGG 57.852 50.000 0.00 0.00 46.06 3.61
163 164 4.748277 AATTTCATCATGCCCTTCCAAG 57.252 40.909 0.00 0.00 0.00 3.61
164 165 5.453621 GCATAATTTCATCATGCCCTTCCAA 60.454 40.000 0.00 0.00 39.30 3.53
165 166 4.039488 GCATAATTTCATCATGCCCTTCCA 59.961 41.667 0.00 0.00 39.30 3.53
166 167 4.039488 TGCATAATTTCATCATGCCCTTCC 59.961 41.667 7.49 0.00 43.51 3.46
167 168 5.204409 TGCATAATTTCATCATGCCCTTC 57.796 39.130 7.49 0.00 43.51 3.46
168 169 5.617528 TTGCATAATTTCATCATGCCCTT 57.382 34.783 7.49 0.00 43.51 3.95
169 170 5.617528 TTTGCATAATTTCATCATGCCCT 57.382 34.783 7.49 0.00 43.51 5.19
170 171 6.870971 AATTTGCATAATTTCATCATGCCC 57.129 33.333 7.49 0.00 43.51 5.36
171 172 8.185505 ACAAAATTTGCATAATTTCATCATGCC 58.814 29.630 5.52 0.00 43.51 4.40
172 173 9.562583 AACAAAATTTGCATAATTTCATCATGC 57.437 25.926 5.52 3.62 44.23 4.06
175 176 9.281371 TCCAACAAAATTTGCATAATTTCATCA 57.719 25.926 5.52 2.35 0.00 3.07
176 177 9.763465 CTCCAACAAAATTTGCATAATTTCATC 57.237 29.630 5.52 0.00 0.00 2.92
177 178 9.504708 TCTCCAACAAAATTTGCATAATTTCAT 57.495 25.926 5.52 7.87 0.00 2.57
178 179 8.899427 TCTCCAACAAAATTTGCATAATTTCA 57.101 26.923 5.52 0.00 0.00 2.69
179 180 9.597999 GTTCTCCAACAAAATTTGCATAATTTC 57.402 29.630 5.52 2.22 32.14 2.17
180 181 9.118300 TGTTCTCCAACAAAATTTGCATAATTT 57.882 25.926 5.52 11.43 39.69 1.82
181 182 8.674263 TGTTCTCCAACAAAATTTGCATAATT 57.326 26.923 5.52 0.00 39.69 1.40
197 198 0.250124 ACATCCGCGTTGTTCTCCAA 60.250 50.000 4.92 0.00 0.00 3.53
198 199 0.604073 TACATCCGCGTTGTTCTCCA 59.396 50.000 15.80 0.00 0.00 3.86
199 200 1.278238 CTACATCCGCGTTGTTCTCC 58.722 55.000 15.80 0.00 0.00 3.71
200 201 1.278238 CCTACATCCGCGTTGTTCTC 58.722 55.000 15.80 0.00 0.00 2.87
201 202 0.606604 ACCTACATCCGCGTTGTTCT 59.393 50.000 15.80 0.00 0.00 3.01
202 203 1.435577 AACCTACATCCGCGTTGTTC 58.564 50.000 15.80 0.00 0.00 3.18
203 204 1.886886 AAACCTACATCCGCGTTGTT 58.113 45.000 15.80 1.15 0.00 2.83
204 205 2.738314 GTTAAACCTACATCCGCGTTGT 59.262 45.455 15.08 15.08 0.00 3.32
205 206 2.737783 TGTTAAACCTACATCCGCGTTG 59.262 45.455 4.92 4.90 0.00 4.10
206 207 3.042871 TGTTAAACCTACATCCGCGTT 57.957 42.857 4.92 0.00 0.00 4.84
207 208 2.738314 GTTGTTAAACCTACATCCGCGT 59.262 45.455 4.92 0.00 0.00 6.01
208 209 2.737783 TGTTGTTAAACCTACATCCGCG 59.262 45.455 0.00 0.00 35.25 6.46
209 210 4.957759 ATGTTGTTAAACCTACATCCGC 57.042 40.909 0.00 0.00 35.25 5.54
210 211 8.882415 ATAGTATGTTGTTAAACCTACATCCG 57.118 34.615 0.00 0.00 38.90 4.18
226 227 9.338622 GGCACAATTAGTAGGAAATAGTATGTT 57.661 33.333 0.00 0.00 0.00 2.71
227 228 8.714906 AGGCACAATTAGTAGGAAATAGTATGT 58.285 33.333 0.00 0.00 0.00 2.29
230 231 8.365647 GCTAGGCACAATTAGTAGGAAATAGTA 58.634 37.037 0.00 0.00 0.00 1.82
231 232 7.217906 GCTAGGCACAATTAGTAGGAAATAGT 58.782 38.462 0.00 0.00 0.00 2.12
232 233 6.366332 CGCTAGGCACAATTAGTAGGAAATAG 59.634 42.308 0.00 0.00 0.00 1.73
233 234 6.220930 CGCTAGGCACAATTAGTAGGAAATA 58.779 40.000 0.00 0.00 0.00 1.40
234 235 5.057149 CGCTAGGCACAATTAGTAGGAAAT 58.943 41.667 0.00 0.00 0.00 2.17
235 236 4.439057 CGCTAGGCACAATTAGTAGGAAA 58.561 43.478 0.00 0.00 0.00 3.13
236 237 3.181469 CCGCTAGGCACAATTAGTAGGAA 60.181 47.826 0.00 0.00 0.00 3.36
237 238 2.364324 CCGCTAGGCACAATTAGTAGGA 59.636 50.000 0.00 0.00 0.00 2.94
238 239 2.755650 CCGCTAGGCACAATTAGTAGG 58.244 52.381 0.00 0.00 0.00 3.18
251 252 1.745087 ACATGAAACAATGCCGCTAGG 59.255 47.619 0.00 0.00 41.62 3.02
252 253 3.492421 AACATGAAACAATGCCGCTAG 57.508 42.857 0.00 0.00 0.00 3.42
253 254 3.254411 TGAAACATGAAACAATGCCGCTA 59.746 39.130 0.00 0.00 0.00 4.26
254 255 2.035704 TGAAACATGAAACAATGCCGCT 59.964 40.909 0.00 0.00 0.00 5.52
255 256 2.402305 TGAAACATGAAACAATGCCGC 58.598 42.857 0.00 0.00 0.00 6.53
256 257 4.143073 CCAATGAAACATGAAACAATGCCG 60.143 41.667 0.00 0.00 0.00 5.69
257 258 4.756135 ACCAATGAAACATGAAACAATGCC 59.244 37.500 0.00 0.00 0.00 4.40
258 259 5.927954 ACCAATGAAACATGAAACAATGC 57.072 34.783 0.00 0.00 0.00 3.56
259 260 7.133513 CCAAACCAATGAAACATGAAACAATG 58.866 34.615 0.00 0.00 0.00 2.82
260 261 6.238703 GCCAAACCAATGAAACATGAAACAAT 60.239 34.615 0.00 0.00 0.00 2.71
261 262 5.065731 GCCAAACCAATGAAACATGAAACAA 59.934 36.000 0.00 0.00 0.00 2.83
262 263 4.574013 GCCAAACCAATGAAACATGAAACA 59.426 37.500 0.00 0.00 0.00 2.83
263 264 4.815846 AGCCAAACCAATGAAACATGAAAC 59.184 37.500 0.00 0.00 0.00 2.78
264 265 4.815308 CAGCCAAACCAATGAAACATGAAA 59.185 37.500 0.00 0.00 0.00 2.69
265 266 4.141756 ACAGCCAAACCAATGAAACATGAA 60.142 37.500 0.00 0.00 0.00 2.57
266 267 3.387374 ACAGCCAAACCAATGAAACATGA 59.613 39.130 0.00 0.00 0.00 3.07
267 268 3.731089 ACAGCCAAACCAATGAAACATG 58.269 40.909 0.00 0.00 0.00 3.21
268 269 4.128643 CAACAGCCAAACCAATGAAACAT 58.871 39.130 0.00 0.00 0.00 2.71
269 270 3.055530 ACAACAGCCAAACCAATGAAACA 60.056 39.130 0.00 0.00 0.00 2.83
270 271 3.309410 CACAACAGCCAAACCAATGAAAC 59.691 43.478 0.00 0.00 0.00 2.78
271 272 3.055530 ACACAACAGCCAAACCAATGAAA 60.056 39.130 0.00 0.00 0.00 2.69
272 273 2.499289 ACACAACAGCCAAACCAATGAA 59.501 40.909 0.00 0.00 0.00 2.57
273 274 2.106566 ACACAACAGCCAAACCAATGA 58.893 42.857 0.00 0.00 0.00 2.57
274 275 2.600470 ACACAACAGCCAAACCAATG 57.400 45.000 0.00 0.00 0.00 2.82
275 276 2.499289 TCAACACAACAGCCAAACCAAT 59.501 40.909 0.00 0.00 0.00 3.16
276 277 1.895798 TCAACACAACAGCCAAACCAA 59.104 42.857 0.00 0.00 0.00 3.67
277 278 1.476085 CTCAACACAACAGCCAAACCA 59.524 47.619 0.00 0.00 0.00 3.67
278 279 1.476488 ACTCAACACAACAGCCAAACC 59.524 47.619 0.00 0.00 0.00 3.27
279 280 2.479560 GGACTCAACACAACAGCCAAAC 60.480 50.000 0.00 0.00 0.00 2.93
280 281 1.748493 GGACTCAACACAACAGCCAAA 59.252 47.619 0.00 0.00 0.00 3.28
281 282 1.388547 GGACTCAACACAACAGCCAA 58.611 50.000 0.00 0.00 0.00 4.52
282 283 0.813610 CGGACTCAACACAACAGCCA 60.814 55.000 0.00 0.00 0.00 4.75
283 284 1.941812 CGGACTCAACACAACAGCC 59.058 57.895 0.00 0.00 0.00 4.85
284 285 1.160329 AGCGGACTCAACACAACAGC 61.160 55.000 0.00 0.00 0.00 4.40
285 286 1.299541 AAGCGGACTCAACACAACAG 58.700 50.000 0.00 0.00 0.00 3.16
286 287 1.745232 AAAGCGGACTCAACACAACA 58.255 45.000 0.00 0.00 0.00 3.33
287 288 2.870411 AGTAAAGCGGACTCAACACAAC 59.130 45.455 0.00 0.00 0.00 3.32
288 289 2.869801 CAGTAAAGCGGACTCAACACAA 59.130 45.455 0.00 0.00 0.00 3.33
289 290 2.479837 CAGTAAAGCGGACTCAACACA 58.520 47.619 0.00 0.00 0.00 3.72
290 291 1.194772 GCAGTAAAGCGGACTCAACAC 59.805 52.381 0.00 0.00 0.00 3.32
291 292 1.070134 AGCAGTAAAGCGGACTCAACA 59.930 47.619 0.00 0.00 40.15 3.33
292 293 1.797025 AGCAGTAAAGCGGACTCAAC 58.203 50.000 0.00 0.00 40.15 3.18
293 294 2.543777 AAGCAGTAAAGCGGACTCAA 57.456 45.000 0.00 0.00 40.15 3.02
294 295 2.543777 AAAGCAGTAAAGCGGACTCA 57.456 45.000 0.00 0.00 40.15 3.41
295 296 3.067833 AGAAAAGCAGTAAAGCGGACTC 58.932 45.455 0.00 0.00 40.15 3.36
296 297 3.127425 AGAAAAGCAGTAAAGCGGACT 57.873 42.857 0.00 0.00 40.15 3.85
297 298 3.250040 TGAAGAAAAGCAGTAAAGCGGAC 59.750 43.478 0.00 0.00 40.15 4.79
298 299 3.472652 TGAAGAAAAGCAGTAAAGCGGA 58.527 40.909 0.00 0.00 40.15 5.54
299 300 3.896648 TGAAGAAAAGCAGTAAAGCGG 57.103 42.857 0.00 0.00 40.15 5.52
300 301 4.597079 TGTTGAAGAAAAGCAGTAAAGCG 58.403 39.130 0.00 0.00 40.15 4.68
301 302 5.582550 ACTGTTGAAGAAAAGCAGTAAAGC 58.417 37.500 0.00 0.00 38.46 3.51
302 303 7.008628 CACAACTGTTGAAGAAAAGCAGTAAAG 59.991 37.037 26.00 0.00 39.19 1.85
303 304 6.806249 CACAACTGTTGAAGAAAAGCAGTAAA 59.194 34.615 26.00 0.00 39.19 2.01
304 305 6.150307 TCACAACTGTTGAAGAAAAGCAGTAA 59.850 34.615 26.00 0.00 39.19 2.24
305 306 5.645929 TCACAACTGTTGAAGAAAAGCAGTA 59.354 36.000 26.00 0.00 39.19 2.74
306 307 4.458989 TCACAACTGTTGAAGAAAAGCAGT 59.541 37.500 26.00 0.00 41.51 4.40
307 308 4.985413 TCACAACTGTTGAAGAAAAGCAG 58.015 39.130 26.00 0.00 0.00 4.24
308 309 5.048083 ACTTCACAACTGTTGAAGAAAAGCA 60.048 36.000 26.00 7.85 40.89 3.91
309 310 5.402398 ACTTCACAACTGTTGAAGAAAAGC 58.598 37.500 26.00 0.00 40.89 3.51
310 311 6.744537 CAGACTTCACAACTGTTGAAGAAAAG 59.255 38.462 26.00 19.64 40.89 2.27
311 312 6.429692 TCAGACTTCACAACTGTTGAAGAAAA 59.570 34.615 26.00 11.15 40.89 2.29
312 313 5.937540 TCAGACTTCACAACTGTTGAAGAAA 59.062 36.000 26.00 12.64 40.89 2.52
313 314 5.487433 TCAGACTTCACAACTGTTGAAGAA 58.513 37.500 26.00 23.50 40.89 2.52
314 315 5.084818 TCAGACTTCACAACTGTTGAAGA 57.915 39.130 26.00 18.88 40.89 2.87
315 316 4.260538 GCTCAGACTTCACAACTGTTGAAG 60.261 45.833 26.00 20.78 43.20 3.02
316 317 3.623060 GCTCAGACTTCACAACTGTTGAA 59.377 43.478 26.00 10.74 33.93 2.69
317 318 3.198068 GCTCAGACTTCACAACTGTTGA 58.802 45.455 26.00 2.59 33.93 3.18
318 319 2.033407 CGCTCAGACTTCACAACTGTTG 60.033 50.000 18.44 18.44 33.93 3.33
319 320 2.205074 CGCTCAGACTTCACAACTGTT 58.795 47.619 0.00 0.00 33.93 3.16
320 321 1.858091 CGCTCAGACTTCACAACTGT 58.142 50.000 0.00 0.00 33.93 3.55
321 322 0.510359 GCGCTCAGACTTCACAACTG 59.490 55.000 0.00 0.00 0.00 3.16
322 323 0.104855 TGCGCTCAGACTTCACAACT 59.895 50.000 9.73 0.00 0.00 3.16
323 324 0.937304 TTGCGCTCAGACTTCACAAC 59.063 50.000 9.73 0.00 0.00 3.32
324 325 1.882912 ATTGCGCTCAGACTTCACAA 58.117 45.000 9.73 0.00 0.00 3.33
325 326 1.882912 AATTGCGCTCAGACTTCACA 58.117 45.000 9.73 0.00 0.00 3.58
326 327 2.094417 GGTAATTGCGCTCAGACTTCAC 59.906 50.000 9.73 0.00 0.00 3.18
327 328 2.028112 AGGTAATTGCGCTCAGACTTCA 60.028 45.455 9.73 0.00 0.00 3.02
328 329 2.622436 AGGTAATTGCGCTCAGACTTC 58.378 47.619 9.73 0.00 0.00 3.01
329 330 2.770164 AGGTAATTGCGCTCAGACTT 57.230 45.000 9.73 0.00 0.00 3.01
330 331 3.887621 TTAGGTAATTGCGCTCAGACT 57.112 42.857 9.73 2.53 0.00 3.24
331 332 5.485662 AATTTAGGTAATTGCGCTCAGAC 57.514 39.130 9.73 1.40 35.15 3.51
332 333 7.929245 TGTATAATTTAGGTAATTGCGCTCAGA 59.071 33.333 9.73 0.00 37.07 3.27
333 334 8.083462 TGTATAATTTAGGTAATTGCGCTCAG 57.917 34.615 9.73 0.00 37.07 3.35
334 335 8.615878 ATGTATAATTTAGGTAATTGCGCTCA 57.384 30.769 9.73 0.00 37.07 4.26
335 336 9.893305 AAATGTATAATTTAGGTAATTGCGCTC 57.107 29.630 9.73 0.00 37.07 5.03
336 337 9.893305 GAAATGTATAATTTAGGTAATTGCGCT 57.107 29.630 9.73 0.00 37.07 5.92
337 338 9.893305 AGAAATGTATAATTTAGGTAATTGCGC 57.107 29.630 0.00 0.00 37.07 6.09
386 387 4.310769 AGCACTTAGTCACTGCTACAAAG 58.689 43.478 0.00 0.00 39.52 2.77
387 388 4.039245 AGAGCACTTAGTCACTGCTACAAA 59.961 41.667 0.00 0.00 41.40 2.83
388 389 3.574396 AGAGCACTTAGTCACTGCTACAA 59.426 43.478 0.00 0.00 41.40 2.41
389 390 3.157881 AGAGCACTTAGTCACTGCTACA 58.842 45.455 0.00 0.00 41.40 2.74
390 391 3.442273 AGAGAGCACTTAGTCACTGCTAC 59.558 47.826 0.00 0.00 41.40 3.58
391 392 3.441922 CAGAGAGCACTTAGTCACTGCTA 59.558 47.826 0.00 0.00 41.40 3.49
392 393 2.230992 CAGAGAGCACTTAGTCACTGCT 59.769 50.000 0.00 0.00 44.04 4.24
393 394 2.029470 ACAGAGAGCACTTAGTCACTGC 60.029 50.000 0.00 0.00 35.50 4.40
394 395 3.932545 ACAGAGAGCACTTAGTCACTG 57.067 47.619 0.00 0.00 37.40 3.66
395 396 5.536916 AGTTAACAGAGAGCACTTAGTCACT 59.463 40.000 8.61 0.00 0.00 3.41
396 397 5.774630 AGTTAACAGAGAGCACTTAGTCAC 58.225 41.667 8.61 0.00 0.00 3.67
397 398 6.406692 AAGTTAACAGAGAGCACTTAGTCA 57.593 37.500 8.61 0.00 0.00 3.41
398 399 7.654116 AGAAAAGTTAACAGAGAGCACTTAGTC 59.346 37.037 8.61 0.00 0.00 2.59
399 400 7.501844 AGAAAAGTTAACAGAGAGCACTTAGT 58.498 34.615 8.61 0.00 0.00 2.24
400 401 7.954788 AGAAAAGTTAACAGAGAGCACTTAG 57.045 36.000 8.61 0.00 0.00 2.18
401 402 8.732746 AAAGAAAAGTTAACAGAGAGCACTTA 57.267 30.769 8.61 0.00 0.00 2.24
402 403 7.631717 AAAGAAAAGTTAACAGAGAGCACTT 57.368 32.000 8.61 0.26 0.00 3.16
403 404 8.732746 TTAAAGAAAAGTTAACAGAGAGCACT 57.267 30.769 8.61 0.00 0.00 4.40
404 405 8.613482 ACTTAAAGAAAAGTTAACAGAGAGCAC 58.387 33.333 8.61 0.00 36.26 4.40
405 406 8.732746 ACTTAAAGAAAAGTTAACAGAGAGCA 57.267 30.769 8.61 0.00 36.26 4.26
406 407 9.653067 GAACTTAAAGAAAAGTTAACAGAGAGC 57.347 33.333 8.61 0.00 46.92 4.09
417 418 8.683615 CACCCTTACAAGAACTTAAAGAAAAGT 58.316 33.333 9.11 0.00 41.46 2.66
418 419 7.648112 GCACCCTTACAAGAACTTAAAGAAAAG 59.352 37.037 9.11 0.00 0.00 2.27
419 420 7.122948 TGCACCCTTACAAGAACTTAAAGAAAA 59.877 33.333 9.11 0.00 0.00 2.29
420 421 6.603997 TGCACCCTTACAAGAACTTAAAGAAA 59.396 34.615 9.11 0.00 0.00 2.52
421 422 6.123651 TGCACCCTTACAAGAACTTAAAGAA 58.876 36.000 9.11 0.00 0.00 2.52
422 423 5.686753 TGCACCCTTACAAGAACTTAAAGA 58.313 37.500 9.11 0.00 0.00 2.52
423 424 6.575162 ATGCACCCTTACAAGAACTTAAAG 57.425 37.500 0.00 0.00 0.00 1.85
424 425 6.775629 AGAATGCACCCTTACAAGAACTTAAA 59.224 34.615 0.00 0.00 0.00 1.52
425 426 6.303839 AGAATGCACCCTTACAAGAACTTAA 58.696 36.000 0.00 0.00 0.00 1.85
426 427 5.876357 AGAATGCACCCTTACAAGAACTTA 58.124 37.500 0.00 0.00 0.00 2.24
427 428 4.729868 AGAATGCACCCTTACAAGAACTT 58.270 39.130 0.00 0.00 0.00 2.66
428 429 4.373156 AGAATGCACCCTTACAAGAACT 57.627 40.909 0.00 0.00 0.00 3.01
594 597 2.514205 ATTGTGTGCTTTGCTGGAAC 57.486 45.000 0.00 0.00 0.00 3.62
709 717 9.986833 AATTCTATGCTTTGTTTGAAAAACAAC 57.013 25.926 15.77 8.07 39.57 3.32
807 820 5.525012 TGTGCTTTGCTGTGATATGAGATAC 59.475 40.000 0.00 0.00 0.00 2.24
833 847 4.050553 TGTATGCAAAAGCAGCTTTCAAC 58.949 39.130 20.85 13.15 31.99 3.18
883 901 3.191669 CTGTCGGTTGTACACAAAGACA 58.808 45.455 22.31 22.31 45.06 3.41
907 930 1.747774 GGTTGGTGTTGGCTGCATT 59.252 52.632 0.50 0.00 0.00 3.56
1058 1128 2.044946 CCGGGGAGAAGCAAAGGG 60.045 66.667 0.00 0.00 0.00 3.95
1210 1443 0.179134 CGAACCAGGTTAGAGAGCGG 60.179 60.000 4.25 0.00 0.00 5.52
1231 1464 4.567597 ACGGGGACACCTCCACCA 62.568 66.667 0.00 0.00 36.45 4.17
1242 1475 3.936203 GTGGTGCACTGACGGGGA 61.936 66.667 17.98 0.00 0.00 4.81
1269 1502 2.246126 GGTTCTTCCCCCACCCCAT 61.246 63.158 0.00 0.00 0.00 4.00
1324 1557 0.730265 GGCGTCGCAAATAATGGTGA 59.270 50.000 20.50 0.00 0.00 4.02
1389 1622 2.281070 CGGAGGCTGGCGCATAAT 60.281 61.111 10.83 0.00 38.10 1.28
1454 1687 2.118732 TCCTGGGTCACCGCTACA 59.881 61.111 0.00 0.00 40.75 2.74
1531 1788 1.131638 CAGTATCAGGGGCTGGCTAA 58.868 55.000 0.00 0.00 31.51 3.09
1532 1789 0.264657 TCAGTATCAGGGGCTGGCTA 59.735 55.000 0.00 0.00 31.51 3.93
1580 1856 5.334879 CCGTTAACAGCTAGCAATCTTGTTT 60.335 40.000 20.31 8.51 0.00 2.83
1606 1882 1.079127 ATGACTCCGGAACCAAGCG 60.079 57.895 5.23 0.00 0.00 4.68
1654 1930 3.347216 TCTTTTGCTGCTTGAGGATACC 58.653 45.455 0.00 0.00 37.17 2.73
1655 1931 4.637534 TGATCTTTTGCTGCTTGAGGATAC 59.362 41.667 0.00 0.00 0.00 2.24
1768 2045 6.487668 TCGGATATTGATTCTGCATGTTTGAT 59.512 34.615 0.00 0.00 0.00 2.57
1773 2050 4.202398 ACCTCGGATATTGATTCTGCATGT 60.202 41.667 0.00 0.00 0.00 3.21
1997 2479 5.009631 CCAGTACCACCAATCATTCTTCAA 58.990 41.667 0.00 0.00 0.00 2.69
2154 2645 2.224209 GGTTCTGGTTCTTTCCTCGTCA 60.224 50.000 0.00 0.00 0.00 4.35
2188 2679 2.360553 ATAGATCAATCGGCGCAGAG 57.639 50.000 16.84 3.28 0.00 3.35
2209 2700 7.338449 GCAGAACATCTTAAGTTTGGGGTATAA 59.662 37.037 1.63 0.00 0.00 0.98
2397 2911 7.996098 AACATAAGTAAGGCACACAACTATT 57.004 32.000 0.00 0.00 0.00 1.73
2407 2923 2.847449 TGGCCCTAACATAAGTAAGGCA 59.153 45.455 0.00 0.00 38.42 4.75
2520 3036 1.378382 TCAACATGGCCATGGACCG 60.378 57.895 41.25 27.86 42.91 4.79
2563 3079 4.866224 CACCCCGCACCACACACA 62.866 66.667 0.00 0.00 0.00 3.72
2565 3081 4.866224 CACACCCCGCACCACACA 62.866 66.667 0.00 0.00 0.00 3.72
2624 3149 1.884075 CTGGACGATCACCCCGTGAA 61.884 60.000 0.00 0.00 45.96 3.18
2640 3166 2.359602 CCACCTGCAGCACTCTGG 60.360 66.667 8.66 3.31 40.65 3.86
2645 3171 2.980233 GTCCACCACCTGCAGCAC 60.980 66.667 8.66 0.00 0.00 4.40
2646 3172 3.487626 TGTCCACCACCTGCAGCA 61.488 61.111 8.66 0.00 0.00 4.41
2655 3181 3.051210 CTCTGCTCGTGTCCACCA 58.949 61.111 0.00 0.00 0.00 4.17
2656 3182 2.433318 GCTCTGCTCGTGTCCACC 60.433 66.667 0.00 0.00 0.00 4.61
2657 3183 2.807045 CGCTCTGCTCGTGTCCAC 60.807 66.667 0.00 0.00 0.00 4.02
2658 3184 3.295273 ACGCTCTGCTCGTGTCCA 61.295 61.111 0.00 0.00 38.88 4.02
2667 3193 2.094659 ATGCACGTACACGCTCTGC 61.095 57.895 0.85 5.36 44.43 4.26
2669 3195 1.008875 CACATGCACGTACACGCTCT 61.009 55.000 0.85 0.00 44.43 4.09
2671 3197 2.027073 CCACATGCACGTACACGCT 61.027 57.895 0.85 0.00 44.43 5.07
2684 3210 1.004560 CTGCTCGTGTCCACCACAT 60.005 57.895 0.00 0.00 44.78 3.21
2802 3332 2.301738 GGCTGAGTACCCTTGGCCT 61.302 63.158 3.32 0.00 36.40 5.19
2824 3354 3.134574 ACTCAACTTTGCCGGTATGAA 57.865 42.857 1.90 0.00 0.00 2.57
2827 3357 2.030274 GCAAACTCAACTTTGCCGGTAT 60.030 45.455 1.90 0.00 46.98 2.73
2856 3387 2.613506 GCCGAGTCCCCGTGTTTTG 61.614 63.158 0.00 0.00 0.00 2.44
2857 3388 2.281276 GCCGAGTCCCCGTGTTTT 60.281 61.111 0.00 0.00 0.00 2.43
2858 3389 2.612095 TTTGCCGAGTCCCCGTGTTT 62.612 55.000 0.00 0.00 0.00 2.83
2884 3415 3.577805 ATCCCCATTTTAGTTCTCGGG 57.422 47.619 0.00 0.00 0.00 5.14
2891 3422 2.938428 TGCCCAATCCCCATTTTAGT 57.062 45.000 0.00 0.00 0.00 2.24
2954 3492 4.379813 CGTACTCAGCAAAATTTCAGCCAT 60.380 41.667 10.83 0.15 0.00 4.40
2964 3502 2.212869 ACGACACGTACTCAGCAAAA 57.787 45.000 0.00 0.00 38.73 2.44
2995 3533 2.170397 TCGCTCATGGGCTTTCATCTTA 59.830 45.455 17.16 0.00 0.00 2.10
3007 3545 1.413767 CCGACGTTTCTCGCTCATGG 61.414 60.000 0.00 0.00 44.19 3.66
3014 3552 0.511221 AATTGTGCCGACGTTTCTCG 59.489 50.000 0.00 0.00 46.00 4.04
3019 3557 5.616488 AACTAAATAATTGTGCCGACGTT 57.384 34.783 0.00 0.00 0.00 3.99
3045 3583 4.253352 TCGTTTGCCGAGATTTATTTCG 57.747 40.909 0.00 0.00 41.60 3.46
3120 3686 5.112129 ACAAGTGTAAAGTCAAGGGTCTT 57.888 39.130 0.00 0.00 0.00 3.01
3166 3732 3.066760 CGAAAAAGCCAAGTGTCCTTCTT 59.933 43.478 0.00 0.00 0.00 2.52
3177 3743 1.748493 ACAACTCAGCGAAAAAGCCAA 59.252 42.857 0.00 0.00 38.01 4.52
3203 3769 0.544697 TCGGTAAAGGAGGATTGCCC 59.455 55.000 0.00 0.00 33.31 5.36
3249 3815 7.853524 TGCAGAAACAAATAAAGCAGAAAATG 58.146 30.769 0.00 0.00 0.00 2.32
3258 3824 4.866486 GGGCAGATGCAGAAACAAATAAAG 59.134 41.667 7.19 0.00 44.36 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.