Multiple sequence alignment - TraesCS4A01G323800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G323800 chr4A 100.000 2567 0 0 1 2567 611593874 611591308 0.000000e+00 4741.0
1 TraesCS4A01G323800 chr4A 100.000 32 0 0 2192 2223 381207425 381207456 2.760000e-05 60.2
2 TraesCS4A01G323800 chr5B 87.135 855 73 22 717 1565 704227066 704227889 0.000000e+00 935.0
3 TraesCS4A01G323800 chr5B 85.519 366 36 11 1844 2204 704230651 704231004 1.450000e-97 366.0
4 TraesCS4A01G323800 chr5B 85.152 330 30 10 1 325 704220947 704221262 1.150000e-83 320.0
5 TraesCS4A01G323800 chr5B 80.040 501 44 18 57 539 704226477 704226939 1.150000e-83 320.0
6 TraesCS4A01G323800 chr5B 83.708 356 39 9 1844 2191 704231347 704231691 4.120000e-83 318.0
7 TraesCS4A01G323800 chr5B 82.000 300 46 8 2258 2553 664459014 664459309 5.480000e-62 248.0
8 TraesCS4A01G323800 chr5B 83.333 240 23 11 1959 2183 704230078 704230315 3.350000e-49 206.0
9 TraesCS4A01G323800 chr5B 77.876 339 27 24 566 891 704222232 704222535 1.580000e-37 167.0
10 TraesCS4A01G323800 chr5D 82.112 928 90 43 690 1576 558534312 558533420 0.000000e+00 725.0
11 TraesCS4A01G323800 chr5D 83.155 374 48 7 2191 2552 14594830 14594460 6.850000e-86 327.0
12 TraesCS4A01G323800 chr5D 87.200 250 22 8 1959 2204 558532739 558532496 2.520000e-70 276.0
13 TraesCS4A01G323800 chr7B 92.042 377 24 3 2191 2567 59760938 59761308 2.260000e-145 525.0
14 TraesCS4A01G323800 chr1A 83.965 343 41 6 2192 2524 34294906 34295244 1.480000e-82 316.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G323800 chr4A 611591308 611593874 2566 True 4741.0 4741 100.000000 1 2567 1 chr4A.!!$R1 2566
1 TraesCS4A01G323800 chr5B 704220947 704231691 10744 False 376.0 935 83.251857 1 2204 7 chr5B.!!$F2 2203
2 TraesCS4A01G323800 chr5D 558532496 558534312 1816 True 500.5 725 84.656000 690 2204 2 chr5D.!!$R2 1514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
397 5868 0.036875 GTGGTCAAGAGGGAGGTTGG 59.963 60.0 0.0 0.0 0.0 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 7109 0.036732 AGCGAGGACCAAATCTTGCA 59.963 50.0 0.0 0.0 41.56 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 4.447138 AATAATTCGGCACCTATTGGGA 57.553 40.909 0.00 0.00 38.76 4.37
97 99 6.983307 CACAAAGTGTATCAAAATGGACCAAA 59.017 34.615 0.00 0.00 0.00 3.28
103 105 8.090214 AGTGTATCAAAATGGACCAAATGAAAG 58.910 33.333 0.00 0.00 0.00 2.62
115 117 5.594926 ACCAAATGAAAGCATAAGCATAGC 58.405 37.500 0.00 0.00 45.49 2.97
116 118 4.986659 CCAAATGAAAGCATAAGCATAGCC 59.013 41.667 0.00 0.00 45.49 3.93
121 123 7.330744 ATGAAAGCATAAGCATAGCCGATGC 62.331 44.000 12.24 12.24 46.36 3.91
128 130 3.310727 CATAGCCGATGCATGGTCA 57.689 52.632 2.46 0.00 41.13 4.02
129 131 1.154197 CATAGCCGATGCATGGTCAG 58.846 55.000 2.46 0.00 41.13 3.51
130 132 1.051008 ATAGCCGATGCATGGTCAGA 58.949 50.000 2.46 0.00 41.13 3.27
131 133 0.104855 TAGCCGATGCATGGTCAGAC 59.895 55.000 2.46 0.00 41.13 3.51
132 134 2.528743 GCCGATGCATGGTCAGACG 61.529 63.158 2.46 0.00 37.47 4.18
133 135 1.141665 CCGATGCATGGTCAGACGA 59.858 57.895 2.46 0.00 0.00 4.20
134 136 0.873312 CCGATGCATGGTCAGACGAG 60.873 60.000 2.46 0.00 0.00 4.18
135 137 0.101219 CGATGCATGGTCAGACGAGA 59.899 55.000 2.46 0.00 0.00 4.04
136 138 1.850377 GATGCATGGTCAGACGAGAG 58.150 55.000 2.46 0.00 0.00 3.20
137 139 1.406898 GATGCATGGTCAGACGAGAGA 59.593 52.381 2.46 0.00 0.00 3.10
138 140 0.528017 TGCATGGTCAGACGAGAGAC 59.472 55.000 0.00 0.00 0.00 3.36
139 141 0.528017 GCATGGTCAGACGAGAGACA 59.472 55.000 0.00 0.00 36.50 3.41
140 142 1.067565 GCATGGTCAGACGAGAGACAA 60.068 52.381 0.00 0.00 36.50 3.18
141 143 2.600731 CATGGTCAGACGAGAGACAAC 58.399 52.381 0.00 0.00 36.50 3.32
142 144 1.982660 TGGTCAGACGAGAGACAACT 58.017 50.000 0.00 0.00 36.50 3.16
143 145 2.307768 TGGTCAGACGAGAGACAACTT 58.692 47.619 0.00 0.00 36.50 2.66
144 146 2.034685 TGGTCAGACGAGAGACAACTTG 59.965 50.000 0.00 0.00 36.50 3.16
147 149 1.341531 CAGACGAGAGACAACTTGGGT 59.658 52.381 0.00 0.00 0.00 4.51
151 153 1.056660 GAGAGACAACTTGGGTCCCA 58.943 55.000 6.47 6.47 35.89 4.37
162 164 0.413037 TGGGTCCCATGCCTGAAAAT 59.587 50.000 6.47 0.00 0.00 1.82
164 166 1.619432 GGGTCCCATGCCTGAAAATCA 60.619 52.381 1.78 0.00 0.00 2.57
174 176 2.350522 CCTGAAAATCACGGTGAGGAG 58.649 52.381 16.84 7.20 0.00 3.69
195 198 2.895372 GGCAGGGTAACGCCGATG 60.895 66.667 0.00 0.00 38.82 3.84
205 208 1.827399 AACGCCGATGAGAAGTGGGT 61.827 55.000 0.00 0.00 0.00 4.51
209 212 1.599047 CGATGAGAAGTGGGTGGCT 59.401 57.895 0.00 0.00 0.00 4.75
211 214 0.326264 GATGAGAAGTGGGTGGCTGT 59.674 55.000 0.00 0.00 0.00 4.40
219 225 1.847506 TGGGTGGCTGTGAGATGGT 60.848 57.895 0.00 0.00 0.00 3.55
238 244 2.275318 GTGAAGAGAGAAGCCGGAATG 58.725 52.381 5.05 0.00 0.00 2.67
297 5763 6.748198 GTGCAAGTAGTTCTCATCTACAGTAC 59.252 42.308 0.00 0.00 39.86 2.73
312 5778 6.814043 TCTACAGTACGATCTAGCTCTACAA 58.186 40.000 0.00 0.00 0.00 2.41
327 5793 9.265901 CTAGCTCTACAACTGCACATATATTTT 57.734 33.333 0.00 0.00 0.00 1.82
349 5820 8.479313 TTTTCCTTTTCTTTTCTTTTGAGCTC 57.521 30.769 6.82 6.82 0.00 4.09
357 5828 1.207593 CTTTTGAGCTCGCCGGTTG 59.792 57.895 9.64 0.00 0.00 3.77
358 5829 1.507141 CTTTTGAGCTCGCCGGTTGT 61.507 55.000 9.64 0.00 0.00 3.32
395 5866 2.058675 CGTGGTCAAGAGGGAGGTT 58.941 57.895 0.00 0.00 0.00 3.50
396 5867 0.320771 CGTGGTCAAGAGGGAGGTTG 60.321 60.000 0.00 0.00 0.00 3.77
397 5868 0.036875 GTGGTCAAGAGGGAGGTTGG 59.963 60.000 0.00 0.00 0.00 3.77
398 5869 0.401395 TGGTCAAGAGGGAGGTTGGT 60.401 55.000 0.00 0.00 0.00 3.67
399 5870 0.036875 GGTCAAGAGGGAGGTTGGTG 59.963 60.000 0.00 0.00 0.00 4.17
400 5871 0.606673 GTCAAGAGGGAGGTTGGTGC 60.607 60.000 0.00 0.00 0.00 5.01
401 5872 1.059584 TCAAGAGGGAGGTTGGTGCA 61.060 55.000 0.00 0.00 0.00 4.57
402 5873 0.178992 CAAGAGGGAGGTTGGTGCAA 60.179 55.000 0.00 0.00 0.00 4.08
403 5874 0.111253 AAGAGGGAGGTTGGTGCAAG 59.889 55.000 0.00 0.00 0.00 4.01
404 5875 1.973812 GAGGGAGGTTGGTGCAAGC 60.974 63.158 0.00 0.00 41.47 4.01
409 5880 2.870372 GGTTGGTGCAAGCTAGCG 59.130 61.111 9.55 0.00 38.60 4.26
410 5881 2.690778 GGTTGGTGCAAGCTAGCGG 61.691 63.158 9.55 7.09 38.60 5.52
429 5900 2.731721 CGTACACGCCGTGCTTGA 60.732 61.111 18.59 0.00 36.98 3.02
445 5916 5.491982 GTGCTTGAGAGGGAGAATCTTTAA 58.508 41.667 0.00 0.00 33.73 1.52
446 5917 5.352846 GTGCTTGAGAGGGAGAATCTTTAAC 59.647 44.000 0.00 0.00 33.73 2.01
447 5918 5.013079 TGCTTGAGAGGGAGAATCTTTAACA 59.987 40.000 0.00 0.00 33.73 2.41
448 5919 5.940470 GCTTGAGAGGGAGAATCTTTAACAA 59.060 40.000 0.00 0.00 33.73 2.83
449 5920 6.093357 GCTTGAGAGGGAGAATCTTTAACAAG 59.907 42.308 0.00 0.00 36.24 3.16
450 5921 6.935240 TGAGAGGGAGAATCTTTAACAAGA 57.065 37.500 0.00 0.00 43.45 3.02
452 5923 6.070538 TGAGAGGGAGAATCTTTAACAAGAGG 60.071 42.308 0.00 0.00 42.53 3.69
453 5924 4.849518 AGGGAGAATCTTTAACAAGAGGC 58.150 43.478 0.00 0.00 42.53 4.70
479 5951 3.059884 GAGAAAATCTCTGTCACGTGCA 58.940 45.455 11.67 11.44 40.30 4.57
493 5965 0.955428 CGTGCAGTGGTATGGTGCTT 60.955 55.000 0.00 0.00 38.09 3.91
496 5968 1.905894 TGCAGTGGTATGGTGCTTCTA 59.094 47.619 0.00 0.00 38.09 2.10
525 6005 2.034558 CCACGTTTTCTTGTTGCCATCT 59.965 45.455 0.00 0.00 0.00 2.90
551 6031 4.779475 GGCCATACCGATGTGGAG 57.221 61.111 0.00 0.00 39.45 3.86
552 6032 1.830145 GGCCATACCGATGTGGAGT 59.170 57.895 0.00 0.00 39.45 3.85
553 6033 0.532862 GGCCATACCGATGTGGAGTG 60.533 60.000 0.00 0.00 39.45 3.51
554 6034 0.464036 GCCATACCGATGTGGAGTGA 59.536 55.000 0.00 0.00 39.45 3.41
555 6035 1.539065 GCCATACCGATGTGGAGTGAG 60.539 57.143 0.00 0.00 39.45 3.51
556 6036 1.069204 CCATACCGATGTGGAGTGAGG 59.931 57.143 0.00 0.00 39.45 3.86
557 6037 0.753262 ATACCGATGTGGAGTGAGGC 59.247 55.000 0.00 0.00 42.00 4.70
558 6038 0.324368 TACCGATGTGGAGTGAGGCT 60.324 55.000 0.00 0.00 42.00 4.58
559 6039 1.194781 ACCGATGTGGAGTGAGGCTT 61.195 55.000 0.00 0.00 42.00 4.35
560 6040 0.742281 CCGATGTGGAGTGAGGCTTG 60.742 60.000 0.00 0.00 42.00 4.01
561 6041 0.036952 CGATGTGGAGTGAGGCTTGT 60.037 55.000 0.00 0.00 0.00 3.16
562 6042 1.446907 GATGTGGAGTGAGGCTTGTG 58.553 55.000 0.00 0.00 0.00 3.33
563 6043 0.767375 ATGTGGAGTGAGGCTTGTGT 59.233 50.000 0.00 0.00 0.00 3.72
564 6044 0.179048 TGTGGAGTGAGGCTTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
567 6047 0.108585 GGAGTGAGGCTTGTGTGGAA 59.891 55.000 0.00 0.00 0.00 3.53
577 6057 2.136298 TTGTGTGGAAACAAGCCTCA 57.864 45.000 0.00 0.00 46.06 3.86
582 6062 0.843309 TGGAAACAAGCCTCACTCCA 59.157 50.000 0.00 0.00 37.44 3.86
584 6064 1.476833 GGAAACAAGCCTCACTCCACA 60.477 52.381 0.00 0.00 0.00 4.17
585 6065 2.508526 GAAACAAGCCTCACTCCACAT 58.491 47.619 0.00 0.00 0.00 3.21
593 6073 3.770040 CACTCCACATCGGCCGGA 61.770 66.667 27.83 13.37 33.14 5.14
597 6077 2.819595 CCACATCGGCCGGACTTG 60.820 66.667 27.83 19.44 0.00 3.16
598 6078 2.047274 CACATCGGCCGGACTTGT 60.047 61.111 27.83 20.10 0.00 3.16
608 6088 3.119637 CGGCCGGACTTGTTTTGATTTAT 60.120 43.478 20.10 0.00 0.00 1.40
612 6092 5.743872 GCCGGACTTGTTTTGATTTATCATC 59.256 40.000 5.05 0.00 36.56 2.92
634 6114 2.888414 CCATGTTGCCATGCATATCTCA 59.112 45.455 0.00 0.00 45.90 3.27
637 6117 2.809696 TGTTGCCATGCATATCTCATCG 59.190 45.455 0.00 0.00 38.76 3.84
638 6118 2.103537 TGCCATGCATATCTCATCGG 57.896 50.000 0.00 0.00 31.71 4.18
639 6119 1.348696 TGCCATGCATATCTCATCGGT 59.651 47.619 0.00 0.00 31.71 4.69
640 6120 2.005451 GCCATGCATATCTCATCGGTC 58.995 52.381 0.00 0.00 0.00 4.79
641 6121 2.265683 CCATGCATATCTCATCGGTCG 58.734 52.381 0.00 0.00 0.00 4.79
647 6131 3.366121 GCATATCTCATCGGTCGAACATG 59.634 47.826 0.00 3.90 0.00 3.21
652 6136 3.123050 CTCATCGGTCGAACATGCATAA 58.877 45.455 0.00 0.00 0.00 1.90
677 6161 1.387756 GTGCATGCACATTTTCTTCGC 59.612 47.619 39.12 12.88 45.53 4.70
679 6163 1.669502 GCATGCACATTTTCTTCGCCA 60.670 47.619 14.21 0.00 0.00 5.69
681 6165 0.597568 TGCACATTTTCTTCGCCAGG 59.402 50.000 0.00 0.00 0.00 4.45
682 6166 0.733909 GCACATTTTCTTCGCCAGGC 60.734 55.000 0.00 0.00 0.00 4.85
683 6167 0.109132 CACATTTTCTTCGCCAGGCC 60.109 55.000 5.63 0.00 0.00 5.19
684 6168 0.539438 ACATTTTCTTCGCCAGGCCA 60.539 50.000 5.01 0.00 0.00 5.36
685 6169 0.171903 CATTTTCTTCGCCAGGCCAG 59.828 55.000 5.01 1.93 0.00 4.85
686 6170 1.598701 ATTTTCTTCGCCAGGCCAGC 61.599 55.000 5.01 6.62 0.00 4.85
687 6171 2.697147 TTTTCTTCGCCAGGCCAGCT 62.697 55.000 15.03 0.00 0.00 4.24
688 6172 3.907260 TTCTTCGCCAGGCCAGCTG 62.907 63.158 15.03 6.78 0.00 4.24
701 6185 0.037326 CCAGCTGAGCTAACCACGAA 60.037 55.000 17.39 0.00 36.40 3.85
704 6188 1.203523 AGCTGAGCTAACCACGAAGAG 59.796 52.381 4.49 0.00 36.99 2.85
705 6189 1.634702 CTGAGCTAACCACGAAGAGC 58.365 55.000 0.00 0.00 35.07 4.09
782 6269 5.941948 AAAGTTTGAATTAGACAGACGGG 57.058 39.130 0.00 0.00 0.00 5.28
783 6270 3.335579 AGTTTGAATTAGACAGACGGGC 58.664 45.455 0.00 0.00 0.00 6.13
822 6320 1.134560 GGTGACCGAGACGAAAGCTAT 59.865 52.381 0.00 0.00 0.00 2.97
893 6396 0.753848 CCCCGCGTCCCCAATAAATT 60.754 55.000 4.92 0.00 0.00 1.82
898 6401 1.748493 GCGTCCCCAATAAATTCAGCA 59.252 47.619 0.00 0.00 0.00 4.41
903 6406 2.168313 CCCCAATAAATTCAGCACCCAC 59.832 50.000 0.00 0.00 0.00 4.61
905 6408 2.159254 CCAATAAATTCAGCACCCACCG 60.159 50.000 0.00 0.00 0.00 4.94
906 6409 1.102978 ATAAATTCAGCACCCACCGC 58.897 50.000 0.00 0.00 0.00 5.68
907 6410 0.963355 TAAATTCAGCACCCACCGCC 60.963 55.000 0.00 0.00 0.00 6.13
908 6411 2.992817 AAATTCAGCACCCACCGCCA 62.993 55.000 0.00 0.00 0.00 5.69
909 6412 4.947147 TTCAGCACCCACCGCCAC 62.947 66.667 0.00 0.00 0.00 5.01
925 6428 1.228003 CACCGCACCAACCTACCAA 60.228 57.895 0.00 0.00 0.00 3.67
942 6448 2.324541 CCAAACCAAGACCAAATCCCA 58.675 47.619 0.00 0.00 0.00 4.37
966 6490 3.207669 CCTGCCAATCAGCTCCGC 61.208 66.667 0.00 0.00 41.50 5.54
979 6503 3.480225 CTCCGCCCGTCCGTACATC 62.480 68.421 0.00 0.00 0.00 3.06
980 6504 4.918129 CCGCCCGTCCGTACATCG 62.918 72.222 0.00 0.00 39.52 3.84
983 6507 2.581409 CCCGTCCGTACATCGCAC 60.581 66.667 0.00 0.00 38.35 5.34
986 6510 2.574929 GTCCGTACATCGCACCCA 59.425 61.111 0.00 0.00 38.35 4.51
1036 6560 3.005539 ACCCTCAGCATCAGCCGT 61.006 61.111 0.00 0.00 43.56 5.68
1038 6562 2.729479 CCCTCAGCATCAGCCGTCT 61.729 63.158 0.00 0.00 43.56 4.18
1114 6644 2.895424 CGGGGCTTCTCCAACCACT 61.895 63.158 0.00 0.00 36.21 4.00
1116 6646 1.973812 GGGCTTCTCCAACCACTGC 60.974 63.158 0.00 0.00 36.21 4.40
1230 6760 0.547712 TCCCCTTCCTCCTCAACCTG 60.548 60.000 0.00 0.00 0.00 4.00
1282 6812 1.062845 GAGCTCTACTCCGTCACGC 59.937 63.158 6.43 0.00 39.75 5.34
1284 6814 2.403987 CTCTACTCCGTCACGCCG 59.596 66.667 0.00 0.00 0.00 6.46
1285 6815 3.736482 CTCTACTCCGTCACGCCGC 62.736 68.421 0.00 0.00 0.00 6.53
1286 6816 4.111016 CTACTCCGTCACGCCGCA 62.111 66.667 0.00 0.00 0.00 5.69
1287 6817 4.409218 TACTCCGTCACGCCGCAC 62.409 66.667 0.00 0.00 0.00 5.34
1323 6853 4.200283 GAGCTGGAGGGCGTCTCG 62.200 72.222 7.19 0.00 43.34 4.04
1567 7109 0.256464 CGTCTCCTCCCAGTCCTAGT 59.744 60.000 0.00 0.00 0.00 2.57
1570 7112 0.324738 CTCCTCCCAGTCCTAGTGCA 60.325 60.000 0.00 0.00 0.00 4.57
1576 7118 2.912956 TCCCAGTCCTAGTGCAAGATTT 59.087 45.455 0.00 0.00 0.00 2.17
1578 7120 3.012518 CCAGTCCTAGTGCAAGATTTGG 58.987 50.000 0.00 0.00 0.00 3.28
1580 7122 3.686726 CAGTCCTAGTGCAAGATTTGGTC 59.313 47.826 0.00 0.00 0.00 4.02
1581 7123 3.010420 GTCCTAGTGCAAGATTTGGTCC 58.990 50.000 0.00 0.00 0.00 4.46
1584 7126 1.813513 AGTGCAAGATTTGGTCCTCG 58.186 50.000 0.00 0.00 0.00 4.63
1585 7127 0.169009 GTGCAAGATTTGGTCCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
1586 7128 0.036732 TGCAAGATTTGGTCCTCGCT 59.963 50.000 0.00 0.00 0.00 4.93
1587 7129 0.729690 GCAAGATTTGGTCCTCGCTC 59.270 55.000 0.00 0.00 0.00 5.03
1588 7130 1.677217 GCAAGATTTGGTCCTCGCTCT 60.677 52.381 0.00 0.00 0.00 4.09
1589 7131 2.418746 GCAAGATTTGGTCCTCGCTCTA 60.419 50.000 0.00 0.00 0.00 2.43
1590 7132 3.742640 GCAAGATTTGGTCCTCGCTCTAT 60.743 47.826 0.00 0.00 0.00 1.98
1618 7178 4.185059 GAGGGCCGTACCGTCGTC 62.185 72.222 0.00 0.00 43.11 4.20
1621 7181 4.185059 GGCCGTACCGTCGTCCTC 62.185 72.222 0.00 0.00 0.00 3.71
1622 7182 3.130160 GCCGTACCGTCGTCCTCT 61.130 66.667 0.00 0.00 0.00 3.69
1623 7183 2.789917 CCGTACCGTCGTCCTCTG 59.210 66.667 0.00 0.00 0.00 3.35
1624 7184 2.099831 CGTACCGTCGTCCTCTGC 59.900 66.667 0.00 0.00 0.00 4.26
1625 7185 2.396955 CGTACCGTCGTCCTCTGCT 61.397 63.158 0.00 0.00 0.00 4.24
1626 7186 1.881602 GTACCGTCGTCCTCTGCTT 59.118 57.895 0.00 0.00 0.00 3.91
1627 7187 0.179169 GTACCGTCGTCCTCTGCTTC 60.179 60.000 0.00 0.00 0.00 3.86
1628 7188 0.607217 TACCGTCGTCCTCTGCTTCA 60.607 55.000 0.00 0.00 0.00 3.02
1629 7189 1.251527 ACCGTCGTCCTCTGCTTCAT 61.252 55.000 0.00 0.00 0.00 2.57
1630 7190 0.738975 CCGTCGTCCTCTGCTTCATA 59.261 55.000 0.00 0.00 0.00 2.15
1631 7191 1.534175 CCGTCGTCCTCTGCTTCATAC 60.534 57.143 0.00 0.00 0.00 2.39
1632 7192 1.402259 CGTCGTCCTCTGCTTCATACT 59.598 52.381 0.00 0.00 0.00 2.12
1633 7193 2.792890 CGTCGTCCTCTGCTTCATACTG 60.793 54.545 0.00 0.00 0.00 2.74
1634 7194 1.751351 TCGTCCTCTGCTTCATACTGG 59.249 52.381 0.00 0.00 0.00 4.00
1635 7195 1.751351 CGTCCTCTGCTTCATACTGGA 59.249 52.381 0.00 0.00 0.00 3.86
1636 7196 2.363680 CGTCCTCTGCTTCATACTGGAT 59.636 50.000 0.00 0.00 0.00 3.41
1637 7197 3.551863 CGTCCTCTGCTTCATACTGGATC 60.552 52.174 0.00 0.00 0.00 3.36
1638 7198 3.640967 GTCCTCTGCTTCATACTGGATCT 59.359 47.826 0.00 0.00 0.00 2.75
1639 7199 3.894427 TCCTCTGCTTCATACTGGATCTC 59.106 47.826 0.00 0.00 0.00 2.75
1640 7200 3.006752 CCTCTGCTTCATACTGGATCTCC 59.993 52.174 0.00 0.00 0.00 3.71
1641 7201 3.896888 CTCTGCTTCATACTGGATCTCCT 59.103 47.826 0.00 0.00 36.82 3.69
1642 7202 5.066913 TCTGCTTCATACTGGATCTCCTA 57.933 43.478 0.00 0.00 36.82 2.94
1643 7203 5.076182 TCTGCTTCATACTGGATCTCCTAG 58.924 45.833 0.00 0.00 36.82 3.02
1644 7204 3.576118 TGCTTCATACTGGATCTCCTAGC 59.424 47.826 0.00 0.00 36.82 3.42
1645 7205 3.056179 GCTTCATACTGGATCTCCTAGCC 60.056 52.174 0.00 0.00 36.82 3.93
1646 7206 2.796557 TCATACTGGATCTCCTAGCCG 58.203 52.381 0.00 0.00 35.94 5.52
1647 7207 1.821753 CATACTGGATCTCCTAGCCGG 59.178 57.143 0.00 0.00 46.25 6.13
1648 7208 0.539901 TACTGGATCTCCTAGCCGGC 60.540 60.000 21.89 21.89 44.53 6.13
1649 7209 2.524394 TGGATCTCCTAGCCGGCC 60.524 66.667 26.15 4.35 35.94 6.13
1650 7210 3.686045 GGATCTCCTAGCCGGCCG 61.686 72.222 26.15 21.04 0.00 6.13
1651 7211 4.365505 GATCTCCTAGCCGGCCGC 62.366 72.222 26.15 16.01 37.98 6.53
1654 7214 4.671569 CTCCTAGCCGGCCGCATC 62.672 72.222 26.15 11.11 41.38 3.91
1678 7238 1.002250 CCGACGAGGACAGTTGTTCG 61.002 60.000 0.00 5.16 45.00 3.95
1681 7241 1.001597 GACGAGGACAGTTGTTCGTCT 60.002 52.381 22.53 5.58 46.45 4.18
1685 7245 2.795470 GAGGACAGTTGTTCGTCTGTTC 59.205 50.000 0.00 0.00 43.64 3.18
1689 7249 1.261619 CAGTTGTTCGTCTGTTCCAGC 59.738 52.381 0.00 0.00 0.00 4.85
1690 7250 0.586802 GTTGTTCGTCTGTTCCAGCC 59.413 55.000 0.00 0.00 0.00 4.85
1692 7252 0.033504 TGTTCGTCTGTTCCAGCCTC 59.966 55.000 0.00 0.00 0.00 4.70
1693 7253 0.670854 GTTCGTCTGTTCCAGCCTCC 60.671 60.000 0.00 0.00 0.00 4.30
1694 7254 1.118965 TTCGTCTGTTCCAGCCTCCA 61.119 55.000 0.00 0.00 0.00 3.86
1695 7255 1.079543 CGTCTGTTCCAGCCTCCAG 60.080 63.158 0.00 0.00 0.00 3.86
1696 7256 1.298014 GTCTGTTCCAGCCTCCAGG 59.702 63.158 0.00 0.00 38.53 4.45
1698 7258 0.768221 TCTGTTCCAGCCTCCAGGTT 60.768 55.000 0.00 0.00 37.57 3.50
1699 7259 0.607489 CTGTTCCAGCCTCCAGGTTG 60.607 60.000 2.51 2.51 44.76 3.77
1703 7263 2.352805 CAGCCTCCAGGTTGGGTC 59.647 66.667 1.53 0.00 41.94 4.46
1709 7269 2.358737 CCAGGTTGGGTCTCGTGC 60.359 66.667 0.00 0.00 32.67 5.34
1722 7282 0.232303 CTCGTGCCGTTTGTCACTTC 59.768 55.000 0.00 0.00 0.00 3.01
1747 7318 1.263484 CTGCGCTTATCTCATTGCTGG 59.737 52.381 9.73 0.00 0.00 4.85
1774 7345 1.267532 CGTGCCGTGCAAGATTGATAC 60.268 52.381 0.00 0.00 41.47 2.24
1775 7346 2.009774 GTGCCGTGCAAGATTGATACT 58.990 47.619 0.00 0.00 41.47 2.12
1776 7347 2.030946 GTGCCGTGCAAGATTGATACTC 59.969 50.000 0.00 0.00 41.47 2.59
1777 7348 1.599542 GCCGTGCAAGATTGATACTCC 59.400 52.381 0.00 0.00 0.00 3.85
1778 7349 2.743183 GCCGTGCAAGATTGATACTCCT 60.743 50.000 0.00 0.00 0.00 3.69
1780 7351 4.051922 CCGTGCAAGATTGATACTCCTAC 58.948 47.826 0.00 0.00 0.00 3.18
1782 7353 5.292765 CGTGCAAGATTGATACTCCTACAT 58.707 41.667 0.00 0.00 0.00 2.29
1783 7354 5.176406 CGTGCAAGATTGATACTCCTACATG 59.824 44.000 0.00 0.00 0.00 3.21
1784 7355 5.468072 GTGCAAGATTGATACTCCTACATGG 59.532 44.000 0.00 0.00 37.10 3.66
1785 7356 5.366477 TGCAAGATTGATACTCCTACATGGA 59.634 40.000 0.00 0.00 43.86 3.41
1788 7359 7.547370 GCAAGATTGATACTCCTACATGGATAC 59.453 40.741 0.00 0.00 45.16 2.24
1807 7386 6.311935 TGGATACACGAAGTAATTGTTGCTAC 59.688 38.462 0.00 0.00 46.17 3.58
1808 7387 6.534079 GGATACACGAAGTAATTGTTGCTACT 59.466 38.462 0.00 0.00 41.61 2.57
1810 7389 6.613755 ACACGAAGTAATTGTTGCTACTTT 57.386 33.333 0.00 0.00 41.61 2.66
1816 7395 6.422776 AGTAATTGTTGCTACTTTCATCCG 57.577 37.500 0.00 0.00 0.00 4.18
1837 7416 4.377897 CGTCTTTCTACTTCCTTGGTGTT 58.622 43.478 0.00 0.00 0.00 3.32
1838 7417 4.814771 CGTCTTTCTACTTCCTTGGTGTTT 59.185 41.667 0.00 0.00 0.00 2.83
1839 7418 5.296035 CGTCTTTCTACTTCCTTGGTGTTTT 59.704 40.000 0.00 0.00 0.00 2.43
1840 7419 6.511282 CGTCTTTCTACTTCCTTGGTGTTTTC 60.511 42.308 0.00 0.00 0.00 2.29
1852 9407 5.363580 CCTTGGTGTTTTCATTGGGCTATAT 59.636 40.000 0.00 0.00 0.00 0.86
1882 9445 2.941453 AGCGTGTGATCTATGAACGT 57.059 45.000 0.00 0.00 36.65 3.99
1884 9447 3.179830 AGCGTGTGATCTATGAACGTTC 58.820 45.455 21.42 21.42 36.65 3.95
1886 9449 2.035674 CGTGTGATCTATGAACGTTCGC 60.036 50.000 22.48 5.82 0.00 4.70
1888 10084 4.348656 GTGTGATCTATGAACGTTCGCTA 58.651 43.478 22.48 15.17 0.00 4.26
1892 10088 6.635641 TGTGATCTATGAACGTTCGCTATTAC 59.364 38.462 22.48 17.84 0.00 1.89
1895 10091 7.865889 TGATCTATGAACGTTCGCTATTACAAT 59.134 33.333 22.48 9.98 0.00 2.71
1897 10093 7.197703 TCTATGAACGTTCGCTATTACAATGA 58.802 34.615 22.48 6.63 0.00 2.57
1903 10099 5.133264 CGTTCGCTATTACAATGATTGAGC 58.867 41.667 12.80 9.15 0.00 4.26
1914 10110 5.531634 ACAATGATTGAGCGACAAACAAAT 58.468 33.333 12.80 4.32 42.68 2.32
1940 10137 0.109458 CTAGGCGTTGCGTGAGTGTA 60.109 55.000 0.00 0.00 0.00 2.90
1947 10144 3.239254 CGTTGCGTGAGTGTAACATCTA 58.761 45.455 0.00 0.00 41.43 1.98
1948 10145 3.059044 CGTTGCGTGAGTGTAACATCTAC 59.941 47.826 0.00 0.00 41.43 2.59
1949 10146 3.926821 TGCGTGAGTGTAACATCTACA 57.073 42.857 0.00 0.00 41.43 2.74
1951 10148 2.921754 GCGTGAGTGTAACATCTACACC 59.078 50.000 10.61 4.65 46.50 4.16
1953 10150 3.918591 CGTGAGTGTAACATCTACACCAC 59.081 47.826 17.50 17.50 46.50 4.16
1955 10152 4.684703 GTGAGTGTAACATCTACACCACAC 59.315 45.833 20.05 19.10 46.50 3.82
1956 10153 4.587262 TGAGTGTAACATCTACACCACACT 59.413 41.667 10.61 4.95 46.76 3.55
1957 10154 5.069914 TGAGTGTAACATCTACACCACACTT 59.930 40.000 10.61 0.00 44.79 3.16
1969 10305 3.072330 ACACCACACTTACACATCCATGA 59.928 43.478 0.00 0.00 0.00 3.07
1985 10321 5.075858 TCCATGAATGCCTTTTTAAGCTG 57.924 39.130 0.00 0.00 0.00 4.24
1998 10334 1.873698 TAAGCTGGACCGACAAACAC 58.126 50.000 0.00 0.00 0.00 3.32
1999 10335 0.107410 AAGCTGGACCGACAAACACA 60.107 50.000 0.00 0.00 0.00 3.72
2030 10366 4.644685 TGTATAGCTGGGCTTTCAATTTCC 59.355 41.667 0.00 0.00 40.44 3.13
2035 10371 2.629617 CTGGGCTTTCAATTTCCACAGT 59.370 45.455 0.00 0.00 0.00 3.55
2074 10410 5.373222 TGAGCACAACCTTTATTAGTGTGT 58.627 37.500 4.25 0.00 32.99 3.72
2114 10452 4.637534 ACATCAGTGTCAATTAGGTGCATC 59.362 41.667 0.00 0.00 31.41 3.91
2115 10453 4.558226 TCAGTGTCAATTAGGTGCATCT 57.442 40.909 4.13 4.13 0.00 2.90
2118 10456 4.093998 CAGTGTCAATTAGGTGCATCTGTC 59.906 45.833 10.55 0.00 0.00 3.51
2145 10483 8.565416 ACTTGCTTAAACTAACCAGACATAAAC 58.435 33.333 0.00 0.00 0.00 2.01
2158 10496 7.234355 ACCAGACATAAACAAGAGGAGAATTT 58.766 34.615 0.00 0.00 0.00 1.82
2207 10545 9.767684 TCAAATGATTACTAGTAAATTTGCACG 57.232 29.630 28.63 16.76 35.41 5.34
2210 10548 6.539324 TGATTACTAGTAAATTTGCACGTGC 58.461 36.000 33.11 33.11 42.50 5.34
2225 10612 2.415426 TGCAACGCACGTCTCTGA 59.585 55.556 0.00 0.00 31.71 3.27
2227 10614 1.661821 GCAACGCACGTCTCTGACT 60.662 57.895 0.00 0.00 0.00 3.41
2230 10617 0.240411 AACGCACGTCTCTGACTACC 59.760 55.000 0.00 0.00 0.00 3.18
2235 10622 2.099921 GCACGTCTCTGACTACCATCAT 59.900 50.000 0.00 0.00 0.00 2.45
2240 10627 7.575909 GCACGTCTCTGACTACCATCATATAAT 60.576 40.741 0.00 0.00 0.00 1.28
2242 10629 8.861086 ACGTCTCTGACTACCATCATATAATTT 58.139 33.333 0.00 0.00 0.00 1.82
2243 10630 9.698309 CGTCTCTGACTACCATCATATAATTTT 57.302 33.333 0.00 0.00 0.00 1.82
2312 10699 9.877178 TGTTTAGCTTAAAAGAAAACCAAATCA 57.123 25.926 0.00 0.00 34.87 2.57
2316 10703 8.369218 AGCTTAAAAGAAAACCAAATCACATG 57.631 30.769 0.00 0.00 0.00 3.21
2317 10704 7.442062 AGCTTAAAAGAAAACCAAATCACATGG 59.558 33.333 0.00 0.00 43.84 3.66
2318 10705 7.440856 GCTTAAAAGAAAACCAAATCACATGGA 59.559 33.333 0.00 0.00 40.56 3.41
2319 10706 9.492973 CTTAAAAGAAAACCAAATCACATGGAT 57.507 29.630 0.00 0.00 40.56 3.41
2320 10707 7.733402 AAAAGAAAACCAAATCACATGGATG 57.267 32.000 0.00 0.00 40.56 3.51
2321 10708 4.824289 AGAAAACCAAATCACATGGATGC 58.176 39.130 0.00 0.00 40.56 3.91
2322 10709 4.529377 AGAAAACCAAATCACATGGATGCT 59.471 37.500 0.00 0.00 40.56 3.79
2323 10710 5.716228 AGAAAACCAAATCACATGGATGCTA 59.284 36.000 0.00 0.00 40.56 3.49
2324 10711 5.999205 AAACCAAATCACATGGATGCTAA 57.001 34.783 0.00 0.00 40.56 3.09
2326 10713 5.999205 ACCAAATCACATGGATGCTAAAA 57.001 34.783 0.00 0.00 40.56 1.52
2327 10714 6.357579 ACCAAATCACATGGATGCTAAAAA 57.642 33.333 0.00 0.00 40.56 1.94
2328 10715 6.400568 ACCAAATCACATGGATGCTAAAAAG 58.599 36.000 0.00 0.00 40.56 2.27
2345 11077 8.965819 TGCTAAAAAGCAGGATATACAAATGAA 58.034 29.630 0.00 0.00 40.23 2.57
2351 11083 7.516198 AGCAGGATATACAAATGAATCCAAC 57.484 36.000 12.97 7.24 40.37 3.77
2352 11084 6.205464 AGCAGGATATACAAATGAATCCAACG 59.795 38.462 12.97 0.00 40.37 4.10
2353 11085 6.568462 GCAGGATATACAAATGAATCCAACGG 60.568 42.308 12.97 0.00 40.37 4.44
2364 11096 1.561769 ATCCAACGGGCACATCCTCA 61.562 55.000 0.00 0.00 34.39 3.86
2365 11097 1.077501 CCAACGGGCACATCCTCAT 60.078 57.895 0.00 0.00 34.39 2.90
2367 11099 0.734889 CAACGGGCACATCCTCATTC 59.265 55.000 0.00 0.00 34.39 2.67
2370 11102 1.019673 CGGGCACATCCTCATTCAAG 58.980 55.000 0.00 0.00 34.39 3.02
2371 11103 1.679944 CGGGCACATCCTCATTCAAGT 60.680 52.381 0.00 0.00 34.39 3.16
2373 11105 3.620488 GGGCACATCCTCATTCAAGTTA 58.380 45.455 0.00 0.00 34.39 2.24
2376 11108 4.641989 GGCACATCCTCATTCAAGTTACAT 59.358 41.667 0.00 0.00 0.00 2.29
2377 11109 5.126061 GGCACATCCTCATTCAAGTTACATT 59.874 40.000 0.00 0.00 0.00 2.71
2378 11110 6.350445 GGCACATCCTCATTCAAGTTACATTT 60.350 38.462 0.00 0.00 0.00 2.32
2380 11112 7.599998 GCACATCCTCATTCAAGTTACATTTTT 59.400 33.333 0.00 0.00 0.00 1.94
2398 11130 3.726291 TTTTTAGAAGCCTGCAACCAC 57.274 42.857 0.00 0.00 0.00 4.16
2399 11131 2.656947 TTTAGAAGCCTGCAACCACT 57.343 45.000 0.00 0.00 0.00 4.00
2400 11132 1.896220 TTAGAAGCCTGCAACCACTG 58.104 50.000 0.00 0.00 0.00 3.66
2401 11133 1.055849 TAGAAGCCTGCAACCACTGA 58.944 50.000 0.00 0.00 0.00 3.41
2402 11134 0.403271 AGAAGCCTGCAACCACTGAT 59.597 50.000 0.00 0.00 0.00 2.90
2403 11135 1.202976 AGAAGCCTGCAACCACTGATT 60.203 47.619 0.00 0.00 0.00 2.57
2404 11136 0.963962 AAGCCTGCAACCACTGATTG 59.036 50.000 0.00 0.00 0.00 2.67
2414 11146 5.481200 CAACCACTGATTGCTCTATTCTG 57.519 43.478 0.00 0.00 0.00 3.02
2415 11147 5.181009 CAACCACTGATTGCTCTATTCTGA 58.819 41.667 0.00 0.00 0.00 3.27
2416 11148 5.627182 ACCACTGATTGCTCTATTCTGAT 57.373 39.130 0.00 0.00 0.00 2.90
2418 11150 5.821470 ACCACTGATTGCTCTATTCTGATTG 59.179 40.000 0.00 0.00 0.00 2.67
2419 11151 5.821470 CCACTGATTGCTCTATTCTGATTGT 59.179 40.000 0.00 0.00 0.00 2.71
2420 11152 6.318144 CCACTGATTGCTCTATTCTGATTGTT 59.682 38.462 0.00 0.00 0.00 2.83
2421 11153 7.187480 CACTGATTGCTCTATTCTGATTGTTG 58.813 38.462 0.00 0.00 0.00 3.33
2423 11155 7.065563 ACTGATTGCTCTATTCTGATTGTTGTC 59.934 37.037 0.00 0.00 0.00 3.18
2424 11156 5.784750 TTGCTCTATTCTGATTGTTGTCG 57.215 39.130 0.00 0.00 0.00 4.35
2425 11157 5.072040 TGCTCTATTCTGATTGTTGTCGA 57.928 39.130 0.00 0.00 0.00 4.20
2426 11158 5.105063 TGCTCTATTCTGATTGTTGTCGAG 58.895 41.667 0.00 0.00 0.00 4.04
2427 11159 4.026145 GCTCTATTCTGATTGTTGTCGAGC 60.026 45.833 0.00 0.00 34.27 5.03
2428 11160 4.433615 TCTATTCTGATTGTTGTCGAGCC 58.566 43.478 0.00 0.00 0.00 4.70
2429 11161 2.839486 TTCTGATTGTTGTCGAGCCT 57.161 45.000 0.00 0.00 0.00 4.58
2430 11162 3.953712 TTCTGATTGTTGTCGAGCCTA 57.046 42.857 0.00 0.00 0.00 3.93
2431 11163 3.510388 TCTGATTGTTGTCGAGCCTAG 57.490 47.619 0.00 0.00 0.00 3.02
2432 11164 2.166459 TCTGATTGTTGTCGAGCCTAGG 59.834 50.000 3.67 3.67 0.00 3.02
2433 11165 1.207089 TGATTGTTGTCGAGCCTAGGG 59.793 52.381 11.72 0.00 0.00 3.53
2434 11166 1.480954 GATTGTTGTCGAGCCTAGGGA 59.519 52.381 11.72 0.00 0.00 4.20
2435 11167 1.568504 TTGTTGTCGAGCCTAGGGAT 58.431 50.000 11.72 0.00 0.00 3.85
2436 11168 0.824109 TGTTGTCGAGCCTAGGGATG 59.176 55.000 11.72 0.00 0.00 3.51
2437 11169 0.530870 GTTGTCGAGCCTAGGGATGC 60.531 60.000 11.72 0.00 0.00 3.91
2438 11170 1.686325 TTGTCGAGCCTAGGGATGCC 61.686 60.000 11.72 0.00 0.00 4.40
2439 11171 2.912542 TCGAGCCTAGGGATGCCG 60.913 66.667 11.72 2.51 0.00 5.69
2440 11172 3.227276 CGAGCCTAGGGATGCCGT 61.227 66.667 11.72 0.00 0.00 5.68
2441 11173 2.797278 CGAGCCTAGGGATGCCGTT 61.797 63.158 11.72 0.00 0.00 4.44
2442 11174 1.227674 GAGCCTAGGGATGCCGTTG 60.228 63.158 11.72 0.00 0.00 4.10
2444 11176 1.056700 AGCCTAGGGATGCCGTTGAT 61.057 55.000 11.72 0.00 0.00 2.57
2445 11177 0.179018 GCCTAGGGATGCCGTTGATT 60.179 55.000 11.72 0.00 0.00 2.57
2446 11178 1.071699 GCCTAGGGATGCCGTTGATTA 59.928 52.381 11.72 0.00 0.00 1.75
2448 11180 3.810743 GCCTAGGGATGCCGTTGATTAAT 60.811 47.826 11.72 0.00 0.00 1.40
2449 11181 4.564821 GCCTAGGGATGCCGTTGATTAATA 60.565 45.833 11.72 0.00 0.00 0.98
2450 11182 5.745227 CCTAGGGATGCCGTTGATTAATAT 58.255 41.667 0.00 0.00 0.00 1.28
2451 11183 6.180472 CCTAGGGATGCCGTTGATTAATATT 58.820 40.000 0.00 0.00 0.00 1.28
2452 11184 6.316390 CCTAGGGATGCCGTTGATTAATATTC 59.684 42.308 0.00 0.00 0.00 1.75
2453 11185 5.630121 AGGGATGCCGTTGATTAATATTCA 58.370 37.500 0.00 0.00 0.00 2.57
2456 11188 5.858581 GGATGCCGTTGATTAATATTCAAGC 59.141 40.000 0.00 1.47 33.95 4.01
2457 11189 5.181690 TGCCGTTGATTAATATTCAAGCC 57.818 39.130 0.00 0.00 33.95 4.35
2458 11190 4.642437 TGCCGTTGATTAATATTCAAGCCA 59.358 37.500 0.00 0.00 33.95 4.75
2459 11191 4.976116 GCCGTTGATTAATATTCAAGCCAC 59.024 41.667 0.00 0.00 33.95 5.01
2460 11192 5.204833 CCGTTGATTAATATTCAAGCCACG 58.795 41.667 0.00 2.63 33.95 4.94
2461 11193 5.204833 CGTTGATTAATATTCAAGCCACGG 58.795 41.667 0.00 0.00 33.95 4.94
2462 11194 5.007234 CGTTGATTAATATTCAAGCCACGGA 59.993 40.000 0.00 0.00 33.95 4.69
2465 11197 4.829064 TTAATATTCAAGCCACGGATGC 57.171 40.909 0.00 0.00 0.00 3.91
2467 11199 1.667236 TATTCAAGCCACGGATGCTG 58.333 50.000 0.00 0.00 39.48 4.41
2468 11200 0.035152 ATTCAAGCCACGGATGCTGA 60.035 50.000 0.00 0.00 39.48 4.26
2469 11201 0.035152 TTCAAGCCACGGATGCTGAT 60.035 50.000 0.00 0.00 39.48 2.90
2471 11203 0.813184 CAAGCCACGGATGCTGATTT 59.187 50.000 0.00 0.00 39.48 2.17
2478 11210 4.129380 CCACGGATGCTGATTTCAAGATA 58.871 43.478 0.00 0.00 0.00 1.98
2479 11211 4.576053 CCACGGATGCTGATTTCAAGATAA 59.424 41.667 0.00 0.00 0.00 1.75
2480 11212 5.066375 CCACGGATGCTGATTTCAAGATAAA 59.934 40.000 0.00 0.00 0.00 1.40
2481 11213 6.404623 CCACGGATGCTGATTTCAAGATAAAA 60.405 38.462 0.00 0.00 0.00 1.52
2485 11217 7.219535 CGGATGCTGATTTCAAGATAAAACTTG 59.780 37.037 0.00 0.00 45.73 3.16
2486 11218 7.009907 GGATGCTGATTTCAAGATAAAACTTGC 59.990 37.037 0.00 0.00 44.52 4.01
2487 11219 6.158598 TGCTGATTTCAAGATAAAACTTGCC 58.841 36.000 0.00 0.00 44.52 4.52
2488 11220 6.158598 GCTGATTTCAAGATAAAACTTGCCA 58.841 36.000 0.00 0.00 44.52 4.92
2489 11221 6.815142 GCTGATTTCAAGATAAAACTTGCCAT 59.185 34.615 0.00 0.00 44.52 4.40
2490 11222 7.201496 GCTGATTTCAAGATAAAACTTGCCATG 60.201 37.037 0.00 0.00 44.52 3.66
2491 11223 6.591062 TGATTTCAAGATAAAACTTGCCATGC 59.409 34.615 0.00 0.00 44.52 4.06
2492 11224 4.454728 TCAAGATAAAACTTGCCATGCC 57.545 40.909 0.00 0.00 44.52 4.40
2493 11225 3.831333 TCAAGATAAAACTTGCCATGCCA 59.169 39.130 0.00 0.00 44.52 4.92
2494 11226 4.467082 TCAAGATAAAACTTGCCATGCCAT 59.533 37.500 0.00 0.00 44.52 4.40
2495 11227 4.395959 AGATAAAACTTGCCATGCCATG 57.604 40.909 0.00 0.00 0.00 3.66
2496 11228 4.025360 AGATAAAACTTGCCATGCCATGA 58.975 39.130 6.18 0.00 0.00 3.07
2497 11229 2.754946 AAAACTTGCCATGCCATGAG 57.245 45.000 6.18 0.00 0.00 2.90
2498 11230 0.248289 AAACTTGCCATGCCATGAGC 59.752 50.000 6.18 8.62 44.14 4.26
2502 11234 1.540267 CTTGCCATGCCATGAGCTATC 59.460 52.381 6.18 0.00 44.23 2.08
2504 11236 1.144298 TGCCATGCCATGAGCTATCTT 59.856 47.619 6.18 0.00 44.23 2.40
2505 11237 1.811359 GCCATGCCATGAGCTATCTTC 59.189 52.381 6.18 0.00 44.23 2.87
2506 11238 2.812983 GCCATGCCATGAGCTATCTTCA 60.813 50.000 6.18 0.00 44.23 3.02
2507 11239 3.075148 CCATGCCATGAGCTATCTTCAG 58.925 50.000 6.18 0.00 44.23 3.02
2510 11242 2.767960 TGCCATGAGCTATCTTCAGTGA 59.232 45.455 0.00 0.00 44.23 3.41
2511 11243 3.390311 TGCCATGAGCTATCTTCAGTGAT 59.610 43.478 0.00 0.00 44.23 3.06
2512 11244 3.995705 GCCATGAGCTATCTTCAGTGATC 59.004 47.826 0.00 0.00 38.99 2.92
2513 11245 4.262549 GCCATGAGCTATCTTCAGTGATCT 60.263 45.833 0.00 0.00 38.99 2.75
2514 11246 5.472148 CCATGAGCTATCTTCAGTGATCTC 58.528 45.833 0.00 0.00 0.00 2.75
2515 11247 5.010820 CCATGAGCTATCTTCAGTGATCTCA 59.989 44.000 0.00 1.50 34.24 3.27
2516 11248 6.462628 CCATGAGCTATCTTCAGTGATCTCAA 60.463 42.308 0.00 0.00 33.78 3.02
2517 11249 5.900425 TGAGCTATCTTCAGTGATCTCAAC 58.100 41.667 0.00 0.00 29.87 3.18
2518 11250 5.420104 TGAGCTATCTTCAGTGATCTCAACA 59.580 40.000 0.00 0.00 29.87 3.33
2519 11251 6.071165 TGAGCTATCTTCAGTGATCTCAACAA 60.071 38.462 0.00 0.00 29.87 2.83
2520 11252 6.887013 AGCTATCTTCAGTGATCTCAACAAT 58.113 36.000 0.00 0.00 0.00 2.71
2521 11253 8.016301 AGCTATCTTCAGTGATCTCAACAATA 57.984 34.615 0.00 0.00 0.00 1.90
2522 11254 8.649591 AGCTATCTTCAGTGATCTCAACAATAT 58.350 33.333 0.00 0.00 0.00 1.28
2523 11255 9.270640 GCTATCTTCAGTGATCTCAACAATATT 57.729 33.333 0.00 0.00 0.00 1.28
2540 11272 9.855361 CAACAATATTTAAAAATTTCACGTGCA 57.145 25.926 11.67 0.00 0.00 4.57
2541 11273 9.856803 AACAATATTTAAAAATTTCACGTGCAC 57.143 25.926 11.67 6.82 0.00 4.57
2542 11274 8.491950 ACAATATTTAAAAATTTCACGTGCACC 58.508 29.630 11.67 0.00 0.00 5.01
2543 11275 5.915812 ATTTAAAAATTTCACGTGCACCC 57.084 34.783 11.67 0.00 0.00 4.61
2544 11276 2.232756 AAAAATTTCACGTGCACCCC 57.767 45.000 11.67 0.00 0.00 4.95
2545 11277 1.115467 AAAATTTCACGTGCACCCCA 58.885 45.000 11.67 0.00 0.00 4.96
2546 11278 0.387565 AAATTTCACGTGCACCCCAC 59.612 50.000 11.67 0.00 41.15 4.61
2547 11279 0.467290 AATTTCACGTGCACCCCACT 60.467 50.000 11.67 0.00 42.42 4.00
2548 11280 0.467290 ATTTCACGTGCACCCCACTT 60.467 50.000 11.67 0.00 42.42 3.16
2549 11281 1.380403 TTTCACGTGCACCCCACTTG 61.380 55.000 11.67 0.00 43.07 3.16
2550 11282 3.286751 CACGTGCACCCCACTTGG 61.287 66.667 12.15 0.00 42.42 3.61
2551 11283 3.484806 ACGTGCACCCCACTTGGA 61.485 61.111 12.15 0.00 42.42 3.53
2552 11284 2.978010 CGTGCACCCCACTTGGAC 60.978 66.667 12.15 0.00 42.42 4.02
2553 11285 2.515901 GTGCACCCCACTTGGACT 59.484 61.111 5.22 0.00 41.35 3.85
2554 11286 1.152756 GTGCACCCCACTTGGACTT 60.153 57.895 5.22 0.00 41.35 3.01
2555 11287 1.152777 TGCACCCCACTTGGACTTG 60.153 57.895 0.00 0.00 37.39 3.16
2556 11288 2.564721 GCACCCCACTTGGACTTGC 61.565 63.158 0.00 0.00 37.39 4.01
2557 11289 1.903404 CACCCCACTTGGACTTGCC 60.903 63.158 0.00 0.00 37.39 4.52
2558 11290 2.084930 ACCCCACTTGGACTTGCCT 61.085 57.895 0.00 0.00 37.39 4.75
2559 11291 1.153756 CCCCACTTGGACTTGCCTT 59.846 57.895 0.00 0.00 37.39 4.35
2560 11292 0.404040 CCCCACTTGGACTTGCCTTA 59.596 55.000 0.00 0.00 37.39 2.69
2561 11293 1.203001 CCCCACTTGGACTTGCCTTAA 60.203 52.381 0.00 0.00 37.39 1.85
2562 11294 2.162681 CCCACTTGGACTTGCCTTAAG 58.837 52.381 0.00 0.00 42.30 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.040062 TCCCAATAGGTGCCGAATTATTTTATG 60.040 37.037 0.00 0.00 36.75 1.90
36 37 7.007723 TCCCAATAGGTGCCGAATTATTTTAT 58.992 34.615 0.00 0.00 36.75 1.40
41 42 3.650942 TCTCCCAATAGGTGCCGAATTAT 59.349 43.478 0.00 0.00 36.75 1.28
55 56 7.233348 ACACTTTGTGTATGAATTTCTCCCAAT 59.767 33.333 1.12 0.00 45.56 3.16
82 83 5.867330 TGCTTTCATTTGGTCCATTTTGAT 58.133 33.333 0.00 0.00 0.00 2.57
84 85 7.624764 GCTTATGCTTTCATTTGGTCCATTTTG 60.625 37.037 0.00 0.00 34.22 2.44
97 99 3.743521 TCGGCTATGCTTATGCTTTCAT 58.256 40.909 1.96 0.00 40.48 2.57
115 117 0.873312 CTCGTCTGACCATGCATCGG 60.873 60.000 12.06 12.06 0.00 4.18
116 118 0.101219 TCTCGTCTGACCATGCATCG 59.899 55.000 0.00 0.00 0.00 3.84
121 123 2.230025 AGTTGTCTCTCGTCTGACCATG 59.770 50.000 1.55 0.00 32.67 3.66
122 124 2.520069 AGTTGTCTCTCGTCTGACCAT 58.480 47.619 1.55 0.00 32.67 3.55
126 128 1.613925 CCCAAGTTGTCTCTCGTCTGA 59.386 52.381 1.45 0.00 0.00 3.27
127 129 1.341531 ACCCAAGTTGTCTCTCGTCTG 59.658 52.381 1.45 0.00 0.00 3.51
128 130 1.614413 GACCCAAGTTGTCTCTCGTCT 59.386 52.381 1.45 0.00 0.00 4.18
129 131 1.336980 GGACCCAAGTTGTCTCTCGTC 60.337 57.143 1.45 0.00 33.22 4.20
130 132 0.680061 GGACCCAAGTTGTCTCTCGT 59.320 55.000 1.45 0.00 33.22 4.18
131 133 0.037232 GGGACCCAAGTTGTCTCTCG 60.037 60.000 5.33 0.00 33.22 4.04
132 134 1.056660 TGGGACCCAAGTTGTCTCTC 58.943 55.000 12.05 0.00 34.22 3.20
133 135 1.352352 CATGGGACCCAAGTTGTCTCT 59.648 52.381 19.58 0.00 36.95 3.10
134 136 1.826385 CATGGGACCCAAGTTGTCTC 58.174 55.000 19.58 0.00 36.95 3.36
135 137 0.251341 GCATGGGACCCAAGTTGTCT 60.251 55.000 19.58 0.00 36.95 3.41
136 138 1.250840 GGCATGGGACCCAAGTTGTC 61.251 60.000 19.58 9.64 36.95 3.18
137 139 1.228862 GGCATGGGACCCAAGTTGT 60.229 57.895 19.58 0.00 36.95 3.32
138 140 1.077265 AGGCATGGGACCCAAGTTG 59.923 57.895 19.58 13.01 36.95 3.16
139 141 1.077265 CAGGCATGGGACCCAAGTT 59.923 57.895 19.58 3.04 36.95 2.66
140 142 1.434513 TTCAGGCATGGGACCCAAGT 61.435 55.000 19.58 0.00 36.95 3.16
141 143 0.251742 TTTCAGGCATGGGACCCAAG 60.252 55.000 19.58 15.30 36.95 3.61
142 144 0.189574 TTTTCAGGCATGGGACCCAA 59.810 50.000 19.58 0.44 36.95 4.12
143 145 0.413037 ATTTTCAGGCATGGGACCCA 59.587 50.000 17.73 17.73 38.19 4.51
144 146 1.114627 GATTTTCAGGCATGGGACCC 58.885 55.000 2.45 2.45 0.00 4.46
147 149 1.462616 CGTGATTTTCAGGCATGGGA 58.537 50.000 0.00 0.00 0.00 4.37
151 153 2.086869 CTCACCGTGATTTTCAGGCAT 58.913 47.619 0.62 0.00 31.43 4.40
180 182 0.174845 TTCTCATCGGCGTTACCCTG 59.825 55.000 6.85 0.00 33.26 4.45
191 194 0.742281 CAGCCACCCACTTCTCATCG 60.742 60.000 0.00 0.00 0.00 3.84
194 197 1.053835 TCACAGCCACCCACTTCTCA 61.054 55.000 0.00 0.00 0.00 3.27
195 198 0.321122 CTCACAGCCACCCACTTCTC 60.321 60.000 0.00 0.00 0.00 2.87
205 208 1.277273 CTCTTCACCATCTCACAGCCA 59.723 52.381 0.00 0.00 0.00 4.75
209 212 3.056250 GCTTCTCTCTTCACCATCTCACA 60.056 47.826 0.00 0.00 0.00 3.58
211 214 2.499289 GGCTTCTCTCTTCACCATCTCA 59.501 50.000 0.00 0.00 0.00 3.27
219 225 1.208052 CCATTCCGGCTTCTCTCTTCA 59.792 52.381 0.00 0.00 0.00 3.02
253 259 0.829990 CTCCAAGGGAAGCCTCTCTC 59.170 60.000 0.00 0.00 27.61 3.20
255 261 0.251634 CACTCCAAGGGAAGCCTCTC 59.748 60.000 0.00 0.00 0.00 3.20
297 5763 3.181496 TGTGCAGTTGTAGAGCTAGATCG 60.181 47.826 1.62 0.00 0.00 3.69
327 5793 5.733373 GCGAGCTCAAAAGAAAAGAAAAGGA 60.733 40.000 15.40 0.00 0.00 3.36
347 5818 1.683790 GAATCGACACAACCGGCGAG 61.684 60.000 9.30 0.06 36.12 5.03
349 5820 2.736682 GGAATCGACACAACCGGCG 61.737 63.158 0.00 0.00 0.00 6.46
370 5841 4.228567 TCTTGACCACGCCGCACA 62.229 61.111 0.00 0.00 0.00 4.57
377 5848 0.320771 CAACCTCCCTCTTGACCACG 60.321 60.000 0.00 0.00 0.00 4.94
384 5855 0.111253 CTTGCACCAACCTCCCTCTT 59.889 55.000 0.00 0.00 0.00 2.85
398 5869 3.765578 TACGGCCGCTAGCTTGCA 61.766 61.111 28.58 4.89 43.05 4.08
399 5870 3.262686 GTACGGCCGCTAGCTTGC 61.263 66.667 28.58 14.84 43.05 4.01
400 5871 2.165301 GTGTACGGCCGCTAGCTTG 61.165 63.158 28.58 4.90 43.05 4.01
401 5872 2.183555 GTGTACGGCCGCTAGCTT 59.816 61.111 28.58 7.06 43.05 3.74
402 5873 4.189188 CGTGTACGGCCGCTAGCT 62.189 66.667 28.58 7.96 43.05 3.32
425 5896 7.390027 TCTTGTTAAAGATTCTCCCTCTCAAG 58.610 38.462 0.00 0.00 37.51 3.02
427 5898 6.070538 CCTCTTGTTAAAGATTCTCCCTCTCA 60.071 42.308 0.00 0.00 41.60 3.27
429 5900 5.338789 GCCTCTTGTTAAAGATTCTCCCTCT 60.339 44.000 0.00 0.00 41.60 3.69
445 5916 5.240013 AGATTTTCTCTTCTGCCTCTTGT 57.760 39.130 0.00 0.00 0.00 3.16
446 5917 5.799681 GAGATTTTCTCTTCTGCCTCTTG 57.200 43.478 0.00 0.00 40.30 3.02
469 5941 0.320334 CCATACCACTGCACGTGACA 60.320 55.000 22.23 15.66 46.81 3.58
470 5942 0.320421 ACCATACCACTGCACGTGAC 60.320 55.000 22.23 11.46 46.81 3.67
479 5951 4.033709 ACATCTAGAAGCACCATACCACT 58.966 43.478 0.00 0.00 0.00 4.00
493 5965 5.010719 ACAAGAAAACGTGGAGACATCTAGA 59.989 40.000 0.00 0.00 46.14 2.43
496 5968 4.073293 ACAAGAAAACGTGGAGACATCT 57.927 40.909 0.00 0.00 46.14 2.90
539 6019 0.324368 AGCCTCACTCCACATCGGTA 60.324 55.000 0.00 0.00 35.57 4.02
540 6020 1.194781 AAGCCTCACTCCACATCGGT 61.195 55.000 0.00 0.00 35.57 4.69
541 6021 0.742281 CAAGCCTCACTCCACATCGG 60.742 60.000 0.00 0.00 0.00 4.18
542 6022 0.036952 ACAAGCCTCACTCCACATCG 60.037 55.000 0.00 0.00 0.00 3.84
543 6023 1.271054 ACACAAGCCTCACTCCACATC 60.271 52.381 0.00 0.00 0.00 3.06
544 6024 0.767375 ACACAAGCCTCACTCCACAT 59.233 50.000 0.00 0.00 0.00 3.21
545 6025 0.179048 CACACAAGCCTCACTCCACA 60.179 55.000 0.00 0.00 0.00 4.17
546 6026 0.886490 CCACACAAGCCTCACTCCAC 60.886 60.000 0.00 0.00 0.00 4.02
547 6027 1.053835 TCCACACAAGCCTCACTCCA 61.054 55.000 0.00 0.00 0.00 3.86
548 6028 0.108585 TTCCACACAAGCCTCACTCC 59.891 55.000 0.00 0.00 0.00 3.85
549 6029 1.604278 GTTTCCACACAAGCCTCACTC 59.396 52.381 0.00 0.00 0.00 3.51
550 6030 1.064758 TGTTTCCACACAAGCCTCACT 60.065 47.619 0.00 0.00 0.00 3.41
551 6031 1.388547 TGTTTCCACACAAGCCTCAC 58.611 50.000 0.00 0.00 0.00 3.51
552 6032 2.023673 CTTGTTTCCACACAAGCCTCA 58.976 47.619 0.83 0.00 45.43 3.86
553 6033 2.781945 CTTGTTTCCACACAAGCCTC 57.218 50.000 0.83 0.00 45.43 4.70
558 6038 1.748493 GTGAGGCTTGTTTCCACACAA 59.252 47.619 5.04 0.00 42.34 3.33
559 6039 1.064758 AGTGAGGCTTGTTTCCACACA 60.065 47.619 11.09 0.00 44.26 3.72
560 6040 1.604278 GAGTGAGGCTTGTTTCCACAC 59.396 52.381 4.82 2.14 42.85 3.82
561 6041 1.476833 GGAGTGAGGCTTGTTTCCACA 60.477 52.381 4.82 0.00 0.00 4.17
562 6042 1.239347 GGAGTGAGGCTTGTTTCCAC 58.761 55.000 0.00 0.00 0.00 4.02
563 6043 0.843309 TGGAGTGAGGCTTGTTTCCA 59.157 50.000 6.82 6.82 32.62 3.53
564 6044 1.239347 GTGGAGTGAGGCTTGTTTCC 58.761 55.000 0.00 0.00 0.00 3.13
567 6047 1.609061 CGATGTGGAGTGAGGCTTGTT 60.609 52.381 0.00 0.00 0.00 2.83
577 6057 3.771160 GTCCGGCCGATGTGGAGT 61.771 66.667 30.73 0.00 42.00 3.85
582 6062 0.536460 AAAACAAGTCCGGCCGATGT 60.536 50.000 30.73 21.95 0.00 3.06
584 6064 0.250553 TCAAAACAAGTCCGGCCGAT 60.251 50.000 30.73 9.54 0.00 4.18
585 6065 0.250553 ATCAAAACAAGTCCGGCCGA 60.251 50.000 30.73 10.38 0.00 5.54
593 6073 8.137745 ACATGGGATGATAAATCAAAACAAGT 57.862 30.769 0.00 0.00 40.69 3.16
597 6077 6.258507 GGCAACATGGGATGATAAATCAAAAC 59.741 38.462 0.00 0.00 40.69 2.43
598 6078 6.070366 TGGCAACATGGGATGATAAATCAAAA 60.070 34.615 0.00 0.00 46.17 2.44
634 6114 1.867233 GCTTATGCATGTTCGACCGAT 59.133 47.619 10.16 0.00 39.41 4.18
657 6141 1.387756 GCGAAGAAAATGTGCATGCAC 59.612 47.619 38.00 38.00 46.33 4.57
660 6144 2.256174 CTGGCGAAGAAAATGTGCATG 58.744 47.619 0.00 0.00 0.00 4.06
666 6150 0.171903 CTGGCCTGGCGAAGAAAATG 59.828 55.000 13.40 0.00 0.00 2.32
667 6151 1.598701 GCTGGCCTGGCGAAGAAAAT 61.599 55.000 20.49 0.00 0.00 1.82
677 6161 1.451028 GTTAGCTCAGCTGGCCTGG 60.451 63.158 10.31 1.66 42.05 4.45
679 6163 1.920325 TGGTTAGCTCAGCTGGCCT 60.920 57.895 10.31 12.65 40.10 5.19
681 6165 2.103042 CGTGGTTAGCTCAGCTGGC 61.103 63.158 10.31 16.01 40.10 4.85
682 6166 0.037326 TTCGTGGTTAGCTCAGCTGG 60.037 55.000 10.31 5.82 40.10 4.85
683 6167 1.067565 TCTTCGTGGTTAGCTCAGCTG 60.068 52.381 10.31 7.63 40.10 4.24
684 6168 1.203523 CTCTTCGTGGTTAGCTCAGCT 59.796 52.381 3.60 3.60 43.41 4.24
685 6169 1.634702 CTCTTCGTGGTTAGCTCAGC 58.365 55.000 0.00 0.00 0.00 4.26
686 6170 1.634702 GCTCTTCGTGGTTAGCTCAG 58.365 55.000 0.00 0.00 32.18 3.35
687 6171 0.109272 CGCTCTTCGTGGTTAGCTCA 60.109 55.000 0.00 0.00 32.73 4.26
688 6172 0.170561 TCGCTCTTCGTGGTTAGCTC 59.829 55.000 0.00 0.00 39.67 4.09
701 6185 2.028658 TCAAATTCAGCTGTCTCGCTCT 60.029 45.455 14.67 0.00 38.41 4.09
704 6188 3.542712 TTTCAAATTCAGCTGTCTCGC 57.457 42.857 14.67 0.00 0.00 5.03
705 6189 5.122239 TGGTATTTCAAATTCAGCTGTCTCG 59.878 40.000 14.67 0.10 0.00 4.04
771 6258 3.066190 CCACGGCCCGTCTGTCTA 61.066 66.667 5.41 0.00 38.32 2.59
782 6269 3.127533 GTGACATCCAGCCACGGC 61.128 66.667 0.00 0.00 42.33 5.68
783 6270 2.815211 CGTGACATCCAGCCACGG 60.815 66.667 0.00 0.00 46.72 4.94
905 6408 3.053896 GTAGGTTGGTGCGGTGGC 61.054 66.667 0.00 0.00 40.52 5.01
906 6409 2.359478 GGTAGGTTGGTGCGGTGG 60.359 66.667 0.00 0.00 0.00 4.61
907 6410 0.820074 TTTGGTAGGTTGGTGCGGTG 60.820 55.000 0.00 0.00 0.00 4.94
908 6411 0.820482 GTTTGGTAGGTTGGTGCGGT 60.820 55.000 0.00 0.00 0.00 5.68
909 6412 1.520600 GGTTTGGTAGGTTGGTGCGG 61.521 60.000 0.00 0.00 0.00 5.69
925 6428 1.482365 GGGTGGGATTTGGTCTTGGTT 60.482 52.381 0.00 0.00 0.00 3.67
942 6448 2.204291 TGATTGGCAGGGGAGGGT 60.204 61.111 0.00 0.00 0.00 4.34
975 6499 4.344865 GGTGGGTGGGTGCGATGT 62.345 66.667 0.00 0.00 0.00 3.06
980 6504 4.759205 GGATGGGTGGGTGGGTGC 62.759 72.222 0.00 0.00 0.00 5.01
986 6510 3.029352 CCATGGGGATGGGTGGGT 61.029 66.667 2.85 0.00 38.04 4.51
1014 6538 1.521010 CTGATGCTGAGGGTGCTCG 60.521 63.158 0.00 0.00 0.00 5.03
1329 6859 4.208686 GGGAGGCGCTCGTAGTGG 62.209 72.222 7.64 0.00 0.00 4.00
1377 6907 4.379243 ACCACCTCTTCCGCTGCG 62.379 66.667 16.34 16.34 0.00 5.18
1382 6912 2.642254 TACGCCACCACCTCTTCCG 61.642 63.158 0.00 0.00 0.00 4.30
1512 7054 1.376553 GAGGAAGGTGAGGTGCTGC 60.377 63.158 0.00 0.00 0.00 5.25
1567 7109 0.036732 AGCGAGGACCAAATCTTGCA 59.963 50.000 0.00 0.00 41.56 4.08
1570 7112 3.243569 CGATAGAGCGAGGACCAAATCTT 60.244 47.826 0.00 0.00 39.76 2.40
1576 7118 2.194212 GGCGATAGAGCGAGGACCA 61.194 63.158 0.00 0.00 38.18 4.02
1578 7120 2.252855 CGGCGATAGAGCGAGGAC 59.747 66.667 0.00 0.00 38.18 3.85
1580 7122 4.708968 GGCGGCGATAGAGCGAGG 62.709 72.222 12.98 0.00 41.20 4.63
1585 7127 3.581165 CTCGTCGGCGGCGATAGAG 62.581 68.421 35.53 35.53 37.74 2.43
1586 7128 3.646976 CTCGTCGGCGGCGATAGA 61.647 66.667 37.15 32.41 37.74 1.98
1587 7129 4.685026 CCTCGTCGGCGGCGATAG 62.685 72.222 37.15 31.72 37.74 2.08
1612 7172 1.402259 AGTATGAAGCAGAGGACGACG 59.598 52.381 0.00 0.00 0.00 5.12
1617 7177 3.894427 GAGATCCAGTATGAAGCAGAGGA 59.106 47.826 0.00 0.00 39.69 3.71
1618 7178 3.006752 GGAGATCCAGTATGAAGCAGAGG 59.993 52.174 0.00 0.00 39.69 3.69
1619 7179 3.896888 AGGAGATCCAGTATGAAGCAGAG 59.103 47.826 0.92 0.00 39.69 3.35
1620 7180 3.921104 AGGAGATCCAGTATGAAGCAGA 58.079 45.455 0.92 0.00 39.69 4.26
1621 7181 4.321899 GCTAGGAGATCCAGTATGAAGCAG 60.322 50.000 0.92 0.00 39.69 4.24
1622 7182 3.576118 GCTAGGAGATCCAGTATGAAGCA 59.424 47.826 0.92 0.00 39.69 3.91
1623 7183 3.056179 GGCTAGGAGATCCAGTATGAAGC 60.056 52.174 0.92 0.00 39.69 3.86
1624 7184 3.192422 CGGCTAGGAGATCCAGTATGAAG 59.808 52.174 0.92 0.00 39.69 3.02
1625 7185 3.157881 CGGCTAGGAGATCCAGTATGAA 58.842 50.000 0.92 0.00 39.69 2.57
1626 7186 2.555448 CCGGCTAGGAGATCCAGTATGA 60.555 54.545 0.92 0.00 45.00 2.15
1627 7187 1.821753 CCGGCTAGGAGATCCAGTATG 59.178 57.143 0.92 0.00 45.00 2.39
1628 7188 1.893210 GCCGGCTAGGAGATCCAGTAT 60.893 57.143 22.15 0.00 45.00 2.12
1629 7189 0.539901 GCCGGCTAGGAGATCCAGTA 60.540 60.000 22.15 0.00 45.00 2.74
1630 7190 1.834822 GCCGGCTAGGAGATCCAGT 60.835 63.158 22.15 0.00 45.00 4.00
1631 7191 2.578714 GGCCGGCTAGGAGATCCAG 61.579 68.421 28.56 0.00 45.00 3.86
1632 7192 2.524394 GGCCGGCTAGGAGATCCA 60.524 66.667 28.56 0.00 45.00 3.41
1633 7193 3.686045 CGGCCGGCTAGGAGATCC 61.686 72.222 28.56 4.75 45.00 3.36
1634 7194 4.365505 GCGGCCGGCTAGGAGATC 62.366 72.222 29.38 5.59 45.00 2.75
1637 7197 4.671569 GATGCGGCCGGCTAGGAG 62.672 72.222 29.38 13.68 45.00 3.69
1656 7216 4.719369 AACTGTCCTCGTCGGCGC 62.719 66.667 3.52 0.00 38.14 6.53
1657 7217 2.805353 CAACTGTCCTCGTCGGCG 60.805 66.667 1.15 1.15 39.92 6.46
1658 7218 1.282930 GAACAACTGTCCTCGTCGGC 61.283 60.000 0.00 0.00 0.00 5.54
1659 7219 1.002250 CGAACAACTGTCCTCGTCGG 61.002 60.000 0.00 0.00 0.00 4.79
1660 7220 0.317603 ACGAACAACTGTCCTCGTCG 60.318 55.000 4.22 2.39 37.01 5.12
1661 7221 1.406447 GACGAACAACTGTCCTCGTC 58.594 55.000 16.80 16.80 45.09 4.20
1662 7222 1.030457 AGACGAACAACTGTCCTCGT 58.970 50.000 8.83 8.83 42.15 4.18
1663 7223 1.269102 ACAGACGAACAACTGTCCTCG 60.269 52.381 0.00 3.09 42.61 4.63
1664 7224 2.510768 ACAGACGAACAACTGTCCTC 57.489 50.000 0.00 0.00 42.61 3.71
1665 7225 2.483188 GGAACAGACGAACAACTGTCCT 60.483 50.000 0.00 0.00 44.94 3.85
1666 7226 1.865340 GGAACAGACGAACAACTGTCC 59.135 52.381 0.00 0.00 44.94 4.02
1667 7227 2.546778 TGGAACAGACGAACAACTGTC 58.453 47.619 0.00 0.00 44.94 3.51
1681 7241 1.455849 CAACCTGGAGGCTGGAACA 59.544 57.895 0.00 0.00 39.32 3.18
1689 7249 1.913762 ACGAGACCCAACCTGGAGG 60.914 63.158 0.00 1.36 40.96 4.30
1690 7250 1.293498 CACGAGACCCAACCTGGAG 59.707 63.158 0.00 0.00 40.96 3.86
1692 7252 2.358737 GCACGAGACCCAACCTGG 60.359 66.667 0.00 0.00 37.25 4.45
1693 7253 2.358737 GGCACGAGACCCAACCTG 60.359 66.667 0.00 0.00 0.00 4.00
1709 7269 1.070577 CAGAAGCGAAGTGACAAACGG 60.071 52.381 0.00 0.00 0.00 4.44
1776 7347 6.984474 ACAATTACTTCGTGTATCCATGTAGG 59.016 38.462 0.00 0.00 39.47 3.18
1777 7348 8.328146 CAACAATTACTTCGTGTATCCATGTAG 58.672 37.037 0.00 0.00 32.82 2.74
1778 7349 7.201574 GCAACAATTACTTCGTGTATCCATGTA 60.202 37.037 0.00 0.00 0.00 2.29
1780 7351 5.965334 GCAACAATTACTTCGTGTATCCATG 59.035 40.000 0.00 0.00 0.00 3.66
1782 7353 5.242434 AGCAACAATTACTTCGTGTATCCA 58.758 37.500 0.00 0.00 0.00 3.41
1783 7354 5.796350 AGCAACAATTACTTCGTGTATCC 57.204 39.130 0.00 0.00 0.00 2.59
1784 7355 7.521509 AGTAGCAACAATTACTTCGTGTATC 57.478 36.000 0.00 0.00 0.00 2.24
1785 7356 7.900782 AAGTAGCAACAATTACTTCGTGTAT 57.099 32.000 0.00 0.00 35.74 2.29
1788 7359 6.655062 TGAAAGTAGCAACAATTACTTCGTG 58.345 36.000 0.00 0.00 38.73 4.35
1789 7360 6.854496 TGAAAGTAGCAACAATTACTTCGT 57.146 33.333 0.00 0.00 38.73 3.85
1790 7361 6.961554 GGATGAAAGTAGCAACAATTACTTCG 59.038 38.462 0.00 0.00 38.73 3.79
1792 7363 6.430000 ACGGATGAAAGTAGCAACAATTACTT 59.570 34.615 0.00 0.00 40.77 2.24
1793 7364 5.938125 ACGGATGAAAGTAGCAACAATTACT 59.062 36.000 0.00 0.00 0.00 2.24
1794 7365 6.092259 AGACGGATGAAAGTAGCAACAATTAC 59.908 38.462 0.00 0.00 0.00 1.89
1807 7386 5.725362 AGGAAGTAGAAAGACGGATGAAAG 58.275 41.667 0.00 0.00 0.00 2.62
1808 7387 5.740290 AGGAAGTAGAAAGACGGATGAAA 57.260 39.130 0.00 0.00 0.00 2.69
1810 7389 4.081642 CCAAGGAAGTAGAAAGACGGATGA 60.082 45.833 0.00 0.00 0.00 2.92
1816 7395 6.317893 TGAAAACACCAAGGAAGTAGAAAGAC 59.682 38.462 0.00 0.00 0.00 3.01
1837 7416 3.243367 GCAACGCATATAGCCCAATGAAA 60.243 43.478 0.00 0.00 41.38 2.69
1838 7417 2.293122 GCAACGCATATAGCCCAATGAA 59.707 45.455 0.00 0.00 41.38 2.57
1839 7418 1.879380 GCAACGCATATAGCCCAATGA 59.121 47.619 0.00 0.00 41.38 2.57
1840 7419 1.400113 CGCAACGCATATAGCCCAATG 60.400 52.381 0.00 0.00 41.38 2.82
1852 9407 2.962786 ACACGCTTACGCAACGCA 60.963 55.556 0.00 0.00 45.53 5.24
1882 9445 5.328886 CGCTCAATCATTGTAATAGCGAA 57.671 39.130 20.90 0.00 46.66 4.70
1884 9447 4.209080 TGTCGCTCAATCATTGTAATAGCG 59.791 41.667 19.92 19.92 45.74 4.26
1886 9449 7.463544 TGTTTGTCGCTCAATCATTGTAATAG 58.536 34.615 0.00 0.00 35.84 1.73
1888 10084 6.252967 TGTTTGTCGCTCAATCATTGTAAT 57.747 33.333 0.00 0.00 35.84 1.89
1892 10088 6.456447 AATTTGTTTGTCGCTCAATCATTG 57.544 33.333 0.00 0.00 36.19 2.82
1895 10091 6.734137 ACTAAATTTGTTTGTCGCTCAATCA 58.266 32.000 0.00 1.73 35.84 2.57
1897 10093 7.425606 AGAACTAAATTTGTTTGTCGCTCAAT 58.574 30.769 0.00 0.00 35.84 2.57
1903 10099 5.788531 CGCCTAGAACTAAATTTGTTTGTCG 59.211 40.000 0.00 2.19 0.00 4.35
1914 10110 2.063266 CACGCAACGCCTAGAACTAAA 58.937 47.619 0.00 0.00 0.00 1.85
1940 10137 5.284861 TGTGTAAGTGTGGTGTAGATGTT 57.715 39.130 0.00 0.00 0.00 2.71
1947 10144 3.072330 TCATGGATGTGTAAGTGTGGTGT 59.928 43.478 0.00 0.00 0.00 4.16
1948 10145 3.673902 TCATGGATGTGTAAGTGTGGTG 58.326 45.455 0.00 0.00 0.00 4.17
1949 10146 4.365514 TTCATGGATGTGTAAGTGTGGT 57.634 40.909 0.00 0.00 0.00 4.16
1951 10148 4.439153 GGCATTCATGGATGTGTAAGTGTG 60.439 45.833 15.55 0.00 0.00 3.82
1953 10150 3.949754 AGGCATTCATGGATGTGTAAGTG 59.050 43.478 15.55 0.00 0.00 3.16
1955 10152 5.587388 AAAGGCATTCATGGATGTGTAAG 57.413 39.130 15.55 0.00 0.00 2.34
1956 10153 5.999205 AAAAGGCATTCATGGATGTGTAA 57.001 34.783 15.55 0.00 0.00 2.41
1957 10154 5.999205 AAAAAGGCATTCATGGATGTGTA 57.001 34.783 15.55 0.00 0.00 2.90
1969 10305 2.231235 CGGTCCAGCTTAAAAAGGCATT 59.769 45.455 0.00 0.00 0.00 3.56
1985 10321 2.094762 AGCTATGTGTTTGTCGGTCC 57.905 50.000 0.00 0.00 0.00 4.46
2030 10366 8.363390 TGCTCATTCTAATCCTTAGATACTGTG 58.637 37.037 0.00 0.85 41.58 3.66
2035 10371 8.150945 GGTTGTGCTCATTCTAATCCTTAGATA 58.849 37.037 0.00 0.00 41.58 1.98
2052 10388 5.941948 ACACACTAATAAAGGTTGTGCTC 57.058 39.130 0.00 0.00 32.49 4.26
2074 10410 6.647895 CACTGATGTGCAAGTATCATATGCTA 59.352 38.462 9.24 0.00 40.66 3.49
2114 10452 5.758296 TCTGGTTAGTTTAAGCAAGTGACAG 59.242 40.000 2.83 0.00 44.47 3.51
2115 10453 5.526111 GTCTGGTTAGTTTAAGCAAGTGACA 59.474 40.000 11.04 0.00 44.47 3.58
2118 10456 6.560253 ATGTCTGGTTAGTTTAAGCAAGTG 57.440 37.500 2.83 0.00 44.47 3.16
2145 10483 4.202141 TGCACAAACCAAATTCTCCTCTTG 60.202 41.667 0.00 0.00 0.00 3.02
2158 10496 5.596836 AAAGAAGAATCTTGCACAAACCA 57.403 34.783 0.00 0.00 45.19 3.67
2210 10548 1.328439 GTAGTCAGAGACGTGCGTTG 58.672 55.000 0.00 0.00 37.67 4.10
2211 10549 0.240411 GGTAGTCAGAGACGTGCGTT 59.760 55.000 0.00 0.00 37.67 4.84
2214 10601 1.472878 TGATGGTAGTCAGAGACGTGC 59.527 52.381 0.00 0.00 37.67 5.34
2217 10604 9.698309 AAAATTATATGATGGTAGTCAGAGACG 57.302 33.333 0.00 0.00 37.67 4.18
2263 10650 9.515226 AACATTATTGTTGGTAGTAAGACATGT 57.485 29.630 0.00 0.00 44.36 3.21
2267 10654 9.983804 GCTAAACATTATTGTTGGTAGTAAGAC 57.016 33.333 3.86 0.00 45.30 3.01
2268 10655 9.953565 AGCTAAACATTATTGTTGGTAGTAAGA 57.046 29.630 3.86 0.00 45.30 2.10
2290 10677 9.474920 CATGTGATTTGGTTTTCTTTTAAGCTA 57.525 29.630 0.00 0.00 0.00 3.32
2292 10679 7.440856 TCCATGTGATTTGGTTTTCTTTTAAGC 59.559 33.333 0.00 0.00 35.64 3.09
2294 10681 9.270640 CATCCATGTGATTTGGTTTTCTTTTAA 57.729 29.630 0.00 0.00 35.64 1.52
2295 10682 7.387397 GCATCCATGTGATTTGGTTTTCTTTTA 59.613 33.333 0.00 0.00 35.64 1.52
2298 10685 5.012354 AGCATCCATGTGATTTGGTTTTCTT 59.988 36.000 0.00 0.00 35.64 2.52
2299 10686 4.529377 AGCATCCATGTGATTTGGTTTTCT 59.471 37.500 0.00 0.00 35.64 2.52
2300 10687 4.824289 AGCATCCATGTGATTTGGTTTTC 58.176 39.130 0.00 0.00 35.64 2.29
2301 10688 4.895668 AGCATCCATGTGATTTGGTTTT 57.104 36.364 0.00 0.00 35.64 2.43
2303 10690 5.999205 TTTAGCATCCATGTGATTTGGTT 57.001 34.783 0.00 0.00 35.64 3.67
2306 10693 5.870433 TGCTTTTTAGCATCCATGTGATTTG 59.130 36.000 0.00 0.00 40.23 2.32
2308 10695 5.394883 CCTGCTTTTTAGCATCCATGTGATT 60.395 40.000 0.00 0.00 44.47 2.57
2309 10696 4.098960 CCTGCTTTTTAGCATCCATGTGAT 59.901 41.667 0.00 0.00 44.47 3.06
2310 10697 3.444742 CCTGCTTTTTAGCATCCATGTGA 59.555 43.478 0.00 0.00 44.47 3.58
2311 10698 3.444742 TCCTGCTTTTTAGCATCCATGTG 59.555 43.478 0.00 0.00 44.47 3.21
2312 10699 3.700538 TCCTGCTTTTTAGCATCCATGT 58.299 40.909 0.00 0.00 44.47 3.21
2313 10700 4.931661 ATCCTGCTTTTTAGCATCCATG 57.068 40.909 0.00 0.00 44.47 3.66
2315 10702 6.600388 TGTATATCCTGCTTTTTAGCATCCA 58.400 36.000 0.00 0.00 44.47 3.41
2316 10703 7.510549 TTGTATATCCTGCTTTTTAGCATCC 57.489 36.000 0.00 0.00 44.47 3.51
2317 10704 9.403110 CATTTGTATATCCTGCTTTTTAGCATC 57.597 33.333 0.00 0.00 44.47 3.91
2318 10705 9.135189 TCATTTGTATATCCTGCTTTTTAGCAT 57.865 29.630 0.00 0.00 44.47 3.79
2319 10706 8.518430 TCATTTGTATATCCTGCTTTTTAGCA 57.482 30.769 0.00 0.00 43.22 3.49
2320 10707 9.971922 ATTCATTTGTATATCCTGCTTTTTAGC 57.028 29.630 0.00 0.00 0.00 3.09
2323 10710 8.980596 TGGATTCATTTGTATATCCTGCTTTTT 58.019 29.630 0.00 0.00 37.90 1.94
2324 10711 8.537728 TGGATTCATTTGTATATCCTGCTTTT 57.462 30.769 0.00 0.00 37.90 2.27
2326 10713 7.255242 CGTTGGATTCATTTGTATATCCTGCTT 60.255 37.037 0.00 0.00 37.90 3.91
2327 10714 6.205464 CGTTGGATTCATTTGTATATCCTGCT 59.795 38.462 0.00 0.00 37.90 4.24
2328 10715 6.373779 CGTTGGATTCATTTGTATATCCTGC 58.626 40.000 0.00 0.00 37.90 4.85
2331 10718 5.335661 GCCCGTTGGATTCATTTGTATATCC 60.336 44.000 0.00 0.00 37.62 2.59
2332 10719 5.240623 TGCCCGTTGGATTCATTTGTATATC 59.759 40.000 0.00 0.00 0.00 1.63
2333 10720 5.009610 GTGCCCGTTGGATTCATTTGTATAT 59.990 40.000 0.00 0.00 0.00 0.86
2336 10723 2.490115 GTGCCCGTTGGATTCATTTGTA 59.510 45.455 0.00 0.00 0.00 2.41
2337 10724 1.272212 GTGCCCGTTGGATTCATTTGT 59.728 47.619 0.00 0.00 0.00 2.83
2339 11071 1.626686 TGTGCCCGTTGGATTCATTT 58.373 45.000 0.00 0.00 0.00 2.32
2342 11074 0.679640 GGATGTGCCCGTTGGATTCA 60.680 55.000 0.00 0.00 0.00 2.57
2345 11077 1.224592 GAGGATGTGCCCGTTGGAT 59.775 57.895 0.00 0.00 37.37 3.41
2347 11079 0.680921 AATGAGGATGTGCCCGTTGG 60.681 55.000 0.00 0.00 37.37 3.77
2348 11080 0.734889 GAATGAGGATGTGCCCGTTG 59.265 55.000 0.00 0.00 37.37 4.10
2351 11083 1.019673 CTTGAATGAGGATGTGCCCG 58.980 55.000 0.00 0.00 37.37 6.13
2352 11084 2.134789 ACTTGAATGAGGATGTGCCC 57.865 50.000 0.00 0.00 37.37 5.36
2353 11085 4.009675 TGTAACTTGAATGAGGATGTGCC 58.990 43.478 0.00 0.00 0.00 5.01
2378 11110 3.068024 CAGTGGTTGCAGGCTTCTAAAAA 59.932 43.478 0.00 0.00 0.00 1.94
2380 11112 2.158682 TCAGTGGTTGCAGGCTTCTAAA 60.159 45.455 0.00 0.00 0.00 1.85
2384 11116 1.068055 CAATCAGTGGTTGCAGGCTTC 60.068 52.381 2.53 0.00 0.00 3.86
2386 11118 2.649831 CAATCAGTGGTTGCAGGCT 58.350 52.632 2.53 0.00 0.00 4.58
2394 11126 5.627182 ATCAGAATAGAGCAATCAGTGGT 57.373 39.130 0.00 0.00 41.89 4.16
2396 11128 6.922247 ACAATCAGAATAGAGCAATCAGTG 57.078 37.500 0.00 0.00 0.00 3.66
2397 11129 6.883217 ACAACAATCAGAATAGAGCAATCAGT 59.117 34.615 0.00 0.00 0.00 3.41
2398 11130 7.317842 ACAACAATCAGAATAGAGCAATCAG 57.682 36.000 0.00 0.00 0.00 2.90
2399 11131 6.036408 CGACAACAATCAGAATAGAGCAATCA 59.964 38.462 0.00 0.00 0.00 2.57
2400 11132 6.256539 TCGACAACAATCAGAATAGAGCAATC 59.743 38.462 0.00 0.00 0.00 2.67
2401 11133 6.108687 TCGACAACAATCAGAATAGAGCAAT 58.891 36.000 0.00 0.00 0.00 3.56
2402 11134 5.478407 TCGACAACAATCAGAATAGAGCAA 58.522 37.500 0.00 0.00 0.00 3.91
2403 11135 5.072040 TCGACAACAATCAGAATAGAGCA 57.928 39.130 0.00 0.00 0.00 4.26
2404 11136 4.026145 GCTCGACAACAATCAGAATAGAGC 60.026 45.833 0.00 0.00 40.12 4.09
2405 11137 4.505922 GGCTCGACAACAATCAGAATAGAG 59.494 45.833 0.00 0.00 0.00 2.43
2406 11138 4.160439 AGGCTCGACAACAATCAGAATAGA 59.840 41.667 0.00 0.00 0.00 1.98
2407 11139 4.437239 AGGCTCGACAACAATCAGAATAG 58.563 43.478 0.00 0.00 0.00 1.73
2408 11140 4.471904 AGGCTCGACAACAATCAGAATA 57.528 40.909 0.00 0.00 0.00 1.75
2409 11141 3.340814 AGGCTCGACAACAATCAGAAT 57.659 42.857 0.00 0.00 0.00 2.40
2410 11142 2.839486 AGGCTCGACAACAATCAGAA 57.161 45.000 0.00 0.00 0.00 3.02
2411 11143 2.166459 CCTAGGCTCGACAACAATCAGA 59.834 50.000 0.00 0.00 0.00 3.27
2412 11144 2.544685 CCTAGGCTCGACAACAATCAG 58.455 52.381 0.00 0.00 0.00 2.90
2414 11146 1.480954 TCCCTAGGCTCGACAACAATC 59.519 52.381 2.05 0.00 0.00 2.67
2415 11147 1.568504 TCCCTAGGCTCGACAACAAT 58.431 50.000 2.05 0.00 0.00 2.71
2416 11148 1.207089 CATCCCTAGGCTCGACAACAA 59.793 52.381 2.05 0.00 0.00 2.83
2418 11150 0.530870 GCATCCCTAGGCTCGACAAC 60.531 60.000 2.05 0.00 0.00 3.32
2419 11151 1.686325 GGCATCCCTAGGCTCGACAA 61.686 60.000 2.05 0.00 31.60 3.18
2420 11152 2.134287 GGCATCCCTAGGCTCGACA 61.134 63.158 2.05 0.00 31.60 4.35
2421 11153 2.737830 GGCATCCCTAGGCTCGAC 59.262 66.667 2.05 0.00 31.60 4.20
2423 11155 2.797278 AACGGCATCCCTAGGCTCG 61.797 63.158 2.05 4.70 34.01 5.03
2424 11156 1.227674 CAACGGCATCCCTAGGCTC 60.228 63.158 2.05 0.00 31.60 4.70
2425 11157 1.056700 ATCAACGGCATCCCTAGGCT 61.057 55.000 2.05 0.00 31.60 4.58
2426 11158 0.179018 AATCAACGGCATCCCTAGGC 60.179 55.000 2.05 0.00 0.00 3.93
2427 11159 3.485463 TTAATCAACGGCATCCCTAGG 57.515 47.619 0.06 0.06 0.00 3.02
2428 11160 6.878923 TGAATATTAATCAACGGCATCCCTAG 59.121 38.462 0.00 0.00 0.00 3.02
2429 11161 6.774673 TGAATATTAATCAACGGCATCCCTA 58.225 36.000 0.00 0.00 0.00 3.53
2430 11162 5.630121 TGAATATTAATCAACGGCATCCCT 58.370 37.500 0.00 0.00 0.00 4.20
2431 11163 5.957842 TGAATATTAATCAACGGCATCCC 57.042 39.130 0.00 0.00 0.00 3.85
2432 11164 5.858581 GCTTGAATATTAATCAACGGCATCC 59.141 40.000 0.00 0.00 33.47 3.51
2433 11165 5.858581 GGCTTGAATATTAATCAACGGCATC 59.141 40.000 0.00 0.00 32.58 3.91
2434 11166 5.301551 TGGCTTGAATATTAATCAACGGCAT 59.698 36.000 12.10 0.00 36.54 4.40
2435 11167 4.642437 TGGCTTGAATATTAATCAACGGCA 59.358 37.500 12.10 12.10 37.73 5.69
2436 11168 4.976116 GTGGCTTGAATATTAATCAACGGC 59.024 41.667 0.00 0.00 33.47 5.68
2437 11169 5.204833 CGTGGCTTGAATATTAATCAACGG 58.795 41.667 0.00 0.00 33.47 4.44
2438 11170 5.007234 TCCGTGGCTTGAATATTAATCAACG 59.993 40.000 0.00 0.00 33.47 4.10
2439 11171 6.371809 TCCGTGGCTTGAATATTAATCAAC 57.628 37.500 0.00 0.00 33.47 3.18
2440 11172 6.514870 GCATCCGTGGCTTGAATATTAATCAA 60.515 38.462 0.00 0.00 35.60 2.57
2441 11173 5.048782 GCATCCGTGGCTTGAATATTAATCA 60.049 40.000 0.00 0.00 0.00 2.57
2442 11174 5.182001 AGCATCCGTGGCTTGAATATTAATC 59.818 40.000 0.00 0.00 38.81 1.75
2444 11176 4.275689 CAGCATCCGTGGCTTGAATATTAA 59.724 41.667 0.00 0.00 40.23 1.40
2445 11177 3.814842 CAGCATCCGTGGCTTGAATATTA 59.185 43.478 0.00 0.00 40.23 0.98
2446 11178 2.620115 CAGCATCCGTGGCTTGAATATT 59.380 45.455 0.00 0.00 40.23 1.28
2448 11180 1.209261 TCAGCATCCGTGGCTTGAATA 59.791 47.619 0.00 0.00 40.23 1.75
2449 11181 0.035152 TCAGCATCCGTGGCTTGAAT 60.035 50.000 0.00 0.00 40.23 2.57
2450 11182 0.035152 ATCAGCATCCGTGGCTTGAA 60.035 50.000 0.00 0.00 40.23 2.69
2451 11183 0.035152 AATCAGCATCCGTGGCTTGA 60.035 50.000 0.00 0.00 40.23 3.02
2452 11184 0.813184 AAATCAGCATCCGTGGCTTG 59.187 50.000 0.00 0.00 40.23 4.01
2453 11185 1.098050 GAAATCAGCATCCGTGGCTT 58.902 50.000 0.00 0.00 40.23 4.35
2456 11188 2.358957 TCTTGAAATCAGCATCCGTGG 58.641 47.619 0.00 0.00 0.00 4.94
2457 11189 5.739752 TTATCTTGAAATCAGCATCCGTG 57.260 39.130 0.00 0.00 0.00 4.94
2458 11190 6.375455 AGTTTTATCTTGAAATCAGCATCCGT 59.625 34.615 0.00 0.00 0.00 4.69
2459 11191 6.789262 AGTTTTATCTTGAAATCAGCATCCG 58.211 36.000 0.00 0.00 0.00 4.18
2460 11192 7.009907 GCAAGTTTTATCTTGAAATCAGCATCC 59.990 37.037 10.07 0.00 45.11 3.51
2461 11193 7.009907 GGCAAGTTTTATCTTGAAATCAGCATC 59.990 37.037 10.07 0.00 45.11 3.91
2462 11194 6.815142 GGCAAGTTTTATCTTGAAATCAGCAT 59.185 34.615 10.07 0.00 45.11 3.79
2465 11197 7.201496 GCATGGCAAGTTTTATCTTGAAATCAG 60.201 37.037 10.07 0.00 45.11 2.90
2467 11199 6.036408 GGCATGGCAAGTTTTATCTTGAAATC 59.964 38.462 15.47 0.00 45.11 2.17
2468 11200 5.876460 GGCATGGCAAGTTTTATCTTGAAAT 59.124 36.000 15.47 1.03 45.11 2.17
2469 11201 5.221601 TGGCATGGCAAGTTTTATCTTGAAA 60.222 36.000 21.13 0.00 45.11 2.69
2471 11203 3.831333 TGGCATGGCAAGTTTTATCTTGA 59.169 39.130 21.13 0.00 45.11 3.02
2478 11210 1.338389 GCTCATGGCATGGCAAGTTTT 60.338 47.619 27.04 6.23 41.35 2.43
2479 11211 0.248289 GCTCATGGCATGGCAAGTTT 59.752 50.000 27.04 6.67 41.35 2.66
2480 11212 0.613853 AGCTCATGGCATGGCAAGTT 60.614 50.000 29.67 14.93 44.79 2.66
2481 11213 0.256752 TAGCTCATGGCATGGCAAGT 59.743 50.000 29.67 18.38 44.79 3.16
2485 11217 1.811359 GAAGATAGCTCATGGCATGGC 59.189 52.381 26.15 25.18 44.79 4.40
2486 11218 3.075148 CTGAAGATAGCTCATGGCATGG 58.925 50.000 26.15 17.60 44.79 3.66
2487 11219 3.498777 CACTGAAGATAGCTCATGGCATG 59.501 47.826 21.42 21.42 44.79 4.06
2488 11220 3.390311 TCACTGAAGATAGCTCATGGCAT 59.610 43.478 0.00 0.00 44.79 4.40
2489 11221 2.767960 TCACTGAAGATAGCTCATGGCA 59.232 45.455 8.58 0.00 44.79 4.92
2490 11222 3.465742 TCACTGAAGATAGCTCATGGC 57.534 47.619 0.00 0.00 42.19 4.40
2491 11223 5.010820 TGAGATCACTGAAGATAGCTCATGG 59.989 44.000 0.00 0.00 29.20 3.66
2492 11224 6.086785 TGAGATCACTGAAGATAGCTCATG 57.913 41.667 0.00 0.00 29.20 3.07
2493 11225 6.097981 TGTTGAGATCACTGAAGATAGCTCAT 59.902 38.462 0.00 0.00 32.35 2.90
2494 11226 5.420104 TGTTGAGATCACTGAAGATAGCTCA 59.580 40.000 0.00 0.00 31.11 4.26
2495 11227 5.900425 TGTTGAGATCACTGAAGATAGCTC 58.100 41.667 0.00 0.00 0.00 4.09
2496 11228 5.929058 TGTTGAGATCACTGAAGATAGCT 57.071 39.130 0.00 0.00 0.00 3.32
2497 11229 8.830201 ATATTGTTGAGATCACTGAAGATAGC 57.170 34.615 0.00 0.00 0.00 2.97
2514 11246 9.855361 TGCACGTGAAATTTTTAAATATTGTTG 57.145 25.926 22.23 0.28 0.00 3.33
2515 11247 9.856803 GTGCACGTGAAATTTTTAAATATTGTT 57.143 25.926 22.23 0.00 0.00 2.83
2516 11248 8.491950 GGTGCACGTGAAATTTTTAAATATTGT 58.508 29.630 22.23 0.00 0.00 2.71
2517 11249 7.954786 GGGTGCACGTGAAATTTTTAAATATTG 59.045 33.333 22.23 0.00 0.00 1.90
2518 11250 7.118535 GGGGTGCACGTGAAATTTTTAAATATT 59.881 33.333 22.23 0.00 0.00 1.28
2519 11251 6.592220 GGGGTGCACGTGAAATTTTTAAATAT 59.408 34.615 22.23 0.00 0.00 1.28
2520 11252 5.927115 GGGGTGCACGTGAAATTTTTAAATA 59.073 36.000 22.23 0.00 0.00 1.40
2521 11253 4.752604 GGGGTGCACGTGAAATTTTTAAAT 59.247 37.500 22.23 0.00 0.00 1.40
2522 11254 4.120589 GGGGTGCACGTGAAATTTTTAAA 58.879 39.130 22.23 0.00 0.00 1.52
2523 11255 3.132289 TGGGGTGCACGTGAAATTTTTAA 59.868 39.130 22.23 0.00 0.00 1.52
2524 11256 2.693591 TGGGGTGCACGTGAAATTTTTA 59.306 40.909 22.23 0.00 0.00 1.52
2525 11257 1.482593 TGGGGTGCACGTGAAATTTTT 59.517 42.857 22.23 0.00 0.00 1.94
2526 11258 1.115467 TGGGGTGCACGTGAAATTTT 58.885 45.000 22.23 0.00 0.00 1.82
2527 11259 0.387565 GTGGGGTGCACGTGAAATTT 59.612 50.000 22.23 0.00 0.00 1.82
2528 11260 0.467290 AGTGGGGTGCACGTGAAATT 60.467 50.000 22.23 0.00 0.00 1.82
2529 11261 0.467290 AAGTGGGGTGCACGTGAAAT 60.467 50.000 22.23 0.00 0.00 2.17
2530 11262 1.077357 AAGTGGGGTGCACGTGAAA 60.077 52.632 22.23 2.99 0.00 2.69
2531 11263 1.821759 CAAGTGGGGTGCACGTGAA 60.822 57.895 22.23 5.66 34.74 3.18
2532 11264 2.203139 CAAGTGGGGTGCACGTGA 60.203 61.111 22.23 1.04 34.74 4.35
2533 11265 3.286751 CCAAGTGGGGTGCACGTG 61.287 66.667 12.28 12.28 33.08 4.49
2534 11266 3.484806 TCCAAGTGGGGTGCACGT 61.485 61.111 11.45 0.00 37.22 4.49
2535 11267 2.958578 AAGTCCAAGTGGGGTGCACG 62.959 60.000 11.45 0.00 37.22 5.34
2536 11268 1.152756 AAGTCCAAGTGGGGTGCAC 60.153 57.895 8.80 8.80 37.22 4.57
2537 11269 1.152777 CAAGTCCAAGTGGGGTGCA 60.153 57.895 0.00 0.00 37.22 4.57
2538 11270 2.564721 GCAAGTCCAAGTGGGGTGC 61.565 63.158 0.00 1.69 37.22 5.01
2539 11271 1.903404 GGCAAGTCCAAGTGGGGTG 60.903 63.158 0.00 0.00 37.22 4.61
2540 11272 1.655114 AAGGCAAGTCCAAGTGGGGT 61.655 55.000 0.00 0.00 37.29 4.95
2541 11273 0.404040 TAAGGCAAGTCCAAGTGGGG 59.596 55.000 0.00 0.00 37.29 4.96
2542 11274 2.162681 CTTAAGGCAAGTCCAAGTGGG 58.837 52.381 0.00 0.00 37.29 4.61
2543 11275 2.863809 ACTTAAGGCAAGTCCAAGTGG 58.136 47.619 7.53 0.00 44.48 4.00
2544 11276 3.437049 GCTACTTAAGGCAAGTCCAAGTG 59.563 47.826 7.53 0.00 44.48 3.16
2545 11277 3.676093 GCTACTTAAGGCAAGTCCAAGT 58.324 45.455 7.53 0.00 44.48 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.