Multiple sequence alignment - TraesCS4A01G314600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G314600 chr4A 100.000 3055 0 0 1 3055 604939612 604942666 0.000000e+00 5642.0
1 TraesCS4A01G314600 chr4A 84.498 787 86 22 1080 1854 604856773 604857535 0.000000e+00 745.0
2 TraesCS4A01G314600 chr4A 90.226 133 12 1 2923 3055 604857742 604857873 4.050000e-39 172.0
3 TraesCS4A01G314600 chr4A 89.610 77 4 1 1909 1985 604857554 604857626 9.020000e-16 95.3
4 TraesCS4A01G314600 chr4A 91.071 56 4 1 2265 2319 656501492 656501437 1.170000e-09 75.0
5 TraesCS4A01G314600 chr5B 89.648 1536 117 22 835 2358 710314644 710313139 0.000000e+00 1917.0
6 TraesCS4A01G314600 chr5B 85.749 1249 96 33 836 2077 694203925 694202752 0.000000e+00 1245.0
7 TraesCS4A01G314600 chr5B 80.257 1013 140 36 1069 2063 694289298 694288328 0.000000e+00 708.0
8 TraesCS4A01G314600 chr5B 78.725 1020 134 30 1085 2083 710325971 710325014 3.370000e-169 604.0
9 TraesCS4A01G314600 chr5B 86.534 453 58 2 1412 1864 694262161 694261712 2.120000e-136 496.0
10 TraesCS4A01G314600 chr5B 88.441 372 29 6 1 364 710315000 710314635 1.300000e-118 436.0
11 TraesCS4A01G314600 chr5B 93.151 292 15 3 2765 3055 710312156 710311869 1.010000e-114 424.0
12 TraesCS4A01G314600 chr5B 80.435 368 60 11 2307 2667 63546140 63546502 1.400000e-68 270.0
13 TraesCS4A01G314600 chr5B 86.726 226 23 5 144 364 694204140 694203917 8.460000e-61 244.0
14 TraesCS4A01G314600 chr5B 83.217 143 21 2 2221 2363 710312575 710312436 8.890000e-26 128.0
15 TraesCS4A01G314600 chr5B 91.463 82 7 0 63 144 694228036 694227955 2.490000e-21 113.0
16 TraesCS4A01G314600 chr5D 88.013 926 89 15 1085 1992 559979032 559978111 0.000000e+00 1075.0
17 TraesCS4A01G314600 chr5D 82.113 956 131 30 1085 2026 556423370 556424299 0.000000e+00 782.0
18 TraesCS4A01G314600 chr5D 81.767 883 126 15 2188 3055 559977645 559976783 0.000000e+00 706.0
19 TraesCS4A01G314600 chr5D 83.481 678 78 16 1191 1864 556449538 556450185 4.360000e-168 601.0
20 TraesCS4A01G314600 chr5D 89.764 127 12 1 2195 2320 559977596 559977470 8.770000e-36 161.0
21 TraesCS4A01G314600 chr5D 73.659 410 87 13 2442 2832 533998347 533997940 4.110000e-29 139.0
22 TraesCS4A01G314600 chr5D 78.010 191 41 1 2606 2795 557655397 557655587 5.350000e-23 119.0
23 TraesCS4A01G314600 chr5D 92.308 39 3 0 2227 2265 22055684 22055722 4.260000e-04 56.5
24 TraesCS4A01G314600 chr5A 95.267 486 21 2 362 845 375570346 375570831 0.000000e+00 769.0
25 TraesCS4A01G314600 chr5A 94.251 487 25 3 362 845 85157515 85158001 0.000000e+00 741.0
26 TraesCS4A01G314600 chr7A 94.726 493 22 4 354 844 715090040 715090530 0.000000e+00 763.0
27 TraesCS4A01G314600 chr7B 94.467 488 24 3 357 842 130514312 130513826 0.000000e+00 749.0
28 TraesCS4A01G314600 chr6A 94.444 486 23 4 362 844 57658005 57658489 0.000000e+00 745.0
29 TraesCS4A01G314600 chr6A 85.714 56 7 1 2222 2276 478311167 478311222 1.180000e-04 58.4
30 TraesCS4A01G314600 chr3B 93.613 501 28 4 346 844 434408472 434408970 0.000000e+00 745.0
31 TraesCS4A01G314600 chr3B 89.796 49 5 0 2272 2320 758458965 758458917 2.540000e-06 63.9
32 TraesCS4A01G314600 chr3A 94.033 486 26 3 362 844 52460589 52460104 0.000000e+00 734.0
33 TraesCS4A01G314600 chr3A 94.179 481 26 2 364 842 363381513 363381033 0.000000e+00 732.0
34 TraesCS4A01G314600 chr2A 93.661 489 28 3 357 842 738738116 738738604 0.000000e+00 728.0
35 TraesCS4A01G314600 chr2A 78.656 506 92 12 2335 2832 539397119 539397616 3.800000e-84 322.0
36 TraesCS4A01G314600 chr1A 79.845 774 106 28 1069 1820 517519749 517520494 1.260000e-143 520.0
37 TraesCS4A01G314600 chr6D 76.692 532 99 19 2321 2832 2900524 2899998 3.880000e-69 272.0
38 TraesCS4A01G314600 chr2D 79.545 352 68 2 2349 2696 605941097 605941448 6.540000e-62 248.0
39 TraesCS4A01G314600 chr2D 95.000 40 2 0 2239 2278 354988304 354988343 2.540000e-06 63.9
40 TraesCS4A01G314600 chr4B 76.749 443 85 15 2351 2783 393456753 393456319 6.590000e-57 231.0
41 TraesCS4A01G314600 chr4D 75.514 535 96 24 2321 2831 58273808 58274331 2.370000e-56 230.0
42 TraesCS4A01G314600 chr4D 89.474 57 5 1 2264 2319 69738022 69738078 1.520000e-08 71.3
43 TraesCS4A01G314600 chr4D 95.238 42 2 0 2269 2310 83281933 83281892 1.970000e-07 67.6
44 TraesCS4A01G314600 chr4D 95.122 41 2 0 2238 2278 58273809 58273849 7.070000e-07 65.8
45 TraesCS4A01G314600 chr7D 77.749 391 74 8 2321 2704 635668894 635669278 8.520000e-56 228.0
46 TraesCS4A01G314600 chr7D 77.749 391 74 8 2321 2704 636338983 636338599 8.520000e-56 228.0
47 TraesCS4A01G314600 chr7D 86.207 58 7 1 2222 2278 420766899 420766842 9.150000e-06 62.1
48 TraesCS4A01G314600 chr1D 73.938 518 105 19 2337 2834 221125172 221124665 6.730000e-42 182.0
49 TraesCS4A01G314600 chr1D 87.931 58 6 1 2222 2278 397982716 397982773 1.970000e-07 67.6
50 TraesCS4A01G314600 chrUn 73.893 429 99 10 2416 2835 344010473 344010049 3.150000e-35 159.0
51 TraesCS4A01G314600 chrUn 73.893 429 99 10 2416 2835 420087071 420086647 3.150000e-35 159.0
52 TraesCS4A01G314600 chr3D 78.472 144 28 3 2091 2232 374036607 374036465 1.170000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G314600 chr4A 604939612 604942666 3054 False 5642.000000 5642 100.000000 1 3055 1 chr4A.!!$F1 3054
1 TraesCS4A01G314600 chr4A 604856773 604857873 1100 False 337.433333 745 88.111333 1080 3055 3 chr4A.!!$F2 1975
2 TraesCS4A01G314600 chr5B 694202752 694204140 1388 True 744.500000 1245 86.237500 144 2077 2 chr5B.!!$R5 1933
3 TraesCS4A01G314600 chr5B 710311869 710315000 3131 True 726.250000 1917 88.614250 1 3055 4 chr5B.!!$R6 3054
4 TraesCS4A01G314600 chr5B 694288328 694289298 970 True 708.000000 708 80.257000 1069 2063 1 chr5B.!!$R3 994
5 TraesCS4A01G314600 chr5B 710325014 710325971 957 True 604.000000 604 78.725000 1085 2083 1 chr5B.!!$R4 998
6 TraesCS4A01G314600 chr5D 556423370 556424299 929 False 782.000000 782 82.113000 1085 2026 1 chr5D.!!$F2 941
7 TraesCS4A01G314600 chr5D 559976783 559979032 2249 True 647.333333 1075 86.514667 1085 3055 3 chr5D.!!$R2 1970
8 TraesCS4A01G314600 chr5D 556449538 556450185 647 False 601.000000 601 83.481000 1191 1864 1 chr5D.!!$F3 673
9 TraesCS4A01G314600 chr1A 517519749 517520494 745 False 520.000000 520 79.845000 1069 1820 1 chr1A.!!$F1 751
10 TraesCS4A01G314600 chr6D 2899998 2900524 526 True 272.000000 272 76.692000 2321 2832 1 chr6D.!!$R1 511


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
563 573 0.040499 TACCCCAACCCTCATTTGGC 59.96 55.0 0.0 0.0 42.06 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2453 3459 0.246635 CGAACTCAACGAGGATGGGT 59.753 55.0 0.0 0.0 33.35 4.51 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.672673 TTCTCTTCAGATTTTACCCTTCATAAG 57.327 33.333 0.00 0.00 0.00 1.73
69 75 9.732130 ATAAGGATCTATATGAGAAGCCAAAAC 57.268 33.333 0.00 0.00 37.85 2.43
70 76 7.385894 AGGATCTATATGAGAAGCCAAAACT 57.614 36.000 0.00 0.00 37.85 2.66
71 77 7.449247 AGGATCTATATGAGAAGCCAAAACTC 58.551 38.462 0.00 0.00 37.85 3.01
72 78 6.652900 GGATCTATATGAGAAGCCAAAACTCC 59.347 42.308 0.00 0.00 37.85 3.85
73 79 6.560003 TCTATATGAGAAGCCAAAACTCCA 57.440 37.500 0.00 0.00 0.00 3.86
117 123 0.245539 TACGAGTTGCCAGTAGTGCC 59.754 55.000 0.00 0.00 0.00 5.01
118 124 1.005037 CGAGTTGCCAGTAGTGCCA 60.005 57.895 0.00 0.00 0.00 4.92
151 157 5.976458 TGGATTTTAACATCCATGGCTTTC 58.024 37.500 17.61 0.00 46.67 2.62
328 338 4.808414 TGCTAGCCCTATCACATCATAC 57.192 45.455 13.29 0.00 0.00 2.39
333 343 7.038373 TGCTAGCCCTATCACATCATACAAATA 60.038 37.037 13.29 0.00 0.00 1.40
381 391 5.768317 CTCTTAGAGCATTACCAGTAGAGC 58.232 45.833 0.00 0.00 0.00 4.09
382 392 4.585162 TCTTAGAGCATTACCAGTAGAGCC 59.415 45.833 0.00 0.00 0.00 4.70
383 393 2.043227 AGAGCATTACCAGTAGAGCCC 58.957 52.381 0.00 0.00 0.00 5.19
384 394 2.043227 GAGCATTACCAGTAGAGCCCT 58.957 52.381 0.00 0.00 0.00 5.19
385 395 2.036604 GAGCATTACCAGTAGAGCCCTC 59.963 54.545 0.00 0.00 0.00 4.30
386 396 1.762957 GCATTACCAGTAGAGCCCTCA 59.237 52.381 0.00 0.00 0.00 3.86
387 397 2.170607 GCATTACCAGTAGAGCCCTCAA 59.829 50.000 0.00 0.00 0.00 3.02
388 398 3.370527 GCATTACCAGTAGAGCCCTCAAA 60.371 47.826 0.00 0.00 0.00 2.69
389 399 3.975168 TTACCAGTAGAGCCCTCAAAC 57.025 47.619 0.00 0.00 0.00 2.93
390 400 0.984995 ACCAGTAGAGCCCTCAAACC 59.015 55.000 0.00 0.00 0.00 3.27
391 401 0.253327 CCAGTAGAGCCCTCAAACCC 59.747 60.000 0.00 0.00 0.00 4.11
392 402 1.280457 CAGTAGAGCCCTCAAACCCT 58.720 55.000 0.00 0.00 0.00 4.34
393 403 1.208293 CAGTAGAGCCCTCAAACCCTC 59.792 57.143 0.00 0.00 0.00 4.30
394 404 1.203313 AGTAGAGCCCTCAAACCCTCA 60.203 52.381 0.00 0.00 0.00 3.86
395 405 1.628846 GTAGAGCCCTCAAACCCTCAA 59.371 52.381 0.00 0.00 0.00 3.02
396 406 1.149101 AGAGCCCTCAAACCCTCAAA 58.851 50.000 0.00 0.00 0.00 2.69
397 407 1.202940 AGAGCCCTCAAACCCTCAAAC 60.203 52.381 0.00 0.00 0.00 2.93
398 408 0.178961 AGCCCTCAAACCCTCAAACC 60.179 55.000 0.00 0.00 0.00 3.27
399 409 1.185618 GCCCTCAAACCCTCAAACCC 61.186 60.000 0.00 0.00 0.00 4.11
400 410 0.541998 CCCTCAAACCCTCAAACCCC 60.542 60.000 0.00 0.00 0.00 4.95
401 411 0.482887 CCTCAAACCCTCAAACCCCT 59.517 55.000 0.00 0.00 0.00 4.79
402 412 1.708551 CCTCAAACCCTCAAACCCCTA 59.291 52.381 0.00 0.00 0.00 3.53
403 413 2.109304 CCTCAAACCCTCAAACCCCTAA 59.891 50.000 0.00 0.00 0.00 2.69
404 414 3.437344 CCTCAAACCCTCAAACCCCTAAA 60.437 47.826 0.00 0.00 0.00 1.85
405 415 4.219919 CTCAAACCCTCAAACCCCTAAAA 58.780 43.478 0.00 0.00 0.00 1.52
406 416 4.621769 TCAAACCCTCAAACCCCTAAAAA 58.378 39.130 0.00 0.00 0.00 1.94
407 417 5.220521 TCAAACCCTCAAACCCCTAAAAAT 58.779 37.500 0.00 0.00 0.00 1.82
408 418 6.382925 TCAAACCCTCAAACCCCTAAAAATA 58.617 36.000 0.00 0.00 0.00 1.40
409 419 6.844917 TCAAACCCTCAAACCCCTAAAAATAA 59.155 34.615 0.00 0.00 0.00 1.40
410 420 6.675413 AACCCTCAAACCCCTAAAAATAAC 57.325 37.500 0.00 0.00 0.00 1.89
411 421 5.972698 ACCCTCAAACCCCTAAAAATAACT 58.027 37.500 0.00 0.00 0.00 2.24
412 422 5.778241 ACCCTCAAACCCCTAAAAATAACTG 59.222 40.000 0.00 0.00 0.00 3.16
413 423 5.778241 CCCTCAAACCCCTAAAAATAACTGT 59.222 40.000 0.00 0.00 0.00 3.55
414 424 6.269077 CCCTCAAACCCCTAAAAATAACTGTT 59.731 38.462 0.00 0.00 0.00 3.16
415 425 7.202056 CCCTCAAACCCCTAAAAATAACTGTTT 60.202 37.037 0.00 0.00 0.00 2.83
416 426 8.208224 CCTCAAACCCCTAAAAATAACTGTTTT 58.792 33.333 0.00 0.00 32.94 2.43
417 427 9.607988 CTCAAACCCCTAAAAATAACTGTTTTT 57.392 29.630 0.00 0.00 42.25 1.94
462 472 4.273318 TCGTAGACTAGAACCCCTTAACC 58.727 47.826 0.00 0.00 0.00 2.85
463 473 3.382865 CGTAGACTAGAACCCCTTAACCC 59.617 52.174 0.00 0.00 0.00 4.11
464 474 3.868476 AGACTAGAACCCCTTAACCCT 57.132 47.619 0.00 0.00 0.00 4.34
465 475 3.722172 AGACTAGAACCCCTTAACCCTC 58.278 50.000 0.00 0.00 0.00 4.30
466 476 3.078612 AGACTAGAACCCCTTAACCCTCA 59.921 47.826 0.00 0.00 0.00 3.86
467 477 3.842436 GACTAGAACCCCTTAACCCTCAA 59.158 47.826 0.00 0.00 0.00 3.02
468 478 4.245308 ACTAGAACCCCTTAACCCTCAAA 58.755 43.478 0.00 0.00 0.00 2.69
469 479 3.520691 AGAACCCCTTAACCCTCAAAC 57.479 47.619 0.00 0.00 0.00 2.93
470 480 2.109480 AGAACCCCTTAACCCTCAAACC 59.891 50.000 0.00 0.00 0.00 3.27
471 481 0.781920 ACCCCTTAACCCTCAAACCC 59.218 55.000 0.00 0.00 0.00 4.11
472 482 1.081481 CCCCTTAACCCTCAAACCCT 58.919 55.000 0.00 0.00 0.00 4.34
473 483 1.431633 CCCCTTAACCCTCAAACCCTT 59.568 52.381 0.00 0.00 0.00 3.95
474 484 2.650827 CCCCTTAACCCTCAAACCCTTA 59.349 50.000 0.00 0.00 0.00 2.69
475 485 3.076333 CCCCTTAACCCTCAAACCCTTAA 59.924 47.826 0.00 0.00 0.00 1.85
476 486 4.449524 CCCCTTAACCCTCAAACCCTTAAA 60.450 45.833 0.00 0.00 0.00 1.52
477 487 5.149239 CCCTTAACCCTCAAACCCTTAAAA 58.851 41.667 0.00 0.00 0.00 1.52
478 488 5.603395 CCCTTAACCCTCAAACCCTTAAAAA 59.397 40.000 0.00 0.00 0.00 1.94
502 512 8.967664 AAAATTTAAAGGTCCAACCCTTAAAC 57.032 30.769 12.54 0.00 43.18 2.01
503 513 7.924358 AATTTAAAGGTCCAACCCTTAAACT 57.076 32.000 12.54 2.61 43.18 2.66
504 514 6.964807 TTTAAAGGTCCAACCCTTAAACTC 57.035 37.500 8.06 0.00 44.14 3.01
505 515 4.808767 AAAGGTCCAACCCTTAAACTCT 57.191 40.909 0.00 0.00 44.14 3.24
506 516 4.368565 AAGGTCCAACCCTTAAACTCTC 57.631 45.455 0.00 0.00 43.09 3.20
507 517 3.599348 AGGTCCAACCCTTAAACTCTCT 58.401 45.455 0.00 0.00 39.75 3.10
508 518 3.583526 AGGTCCAACCCTTAAACTCTCTC 59.416 47.826 0.00 0.00 39.75 3.20
509 519 3.307550 GGTCCAACCCTTAAACTCTCTCC 60.308 52.174 0.00 0.00 30.04 3.71
510 520 2.910977 TCCAACCCTTAAACTCTCTCCC 59.089 50.000 0.00 0.00 0.00 4.30
511 521 2.642807 CCAACCCTTAAACTCTCTCCCA 59.357 50.000 0.00 0.00 0.00 4.37
512 522 3.073946 CCAACCCTTAAACTCTCTCCCAA 59.926 47.826 0.00 0.00 0.00 4.12
513 523 4.263949 CCAACCCTTAAACTCTCTCCCAAT 60.264 45.833 0.00 0.00 0.00 3.16
514 524 4.846168 ACCCTTAAACTCTCTCCCAATC 57.154 45.455 0.00 0.00 0.00 2.67
515 525 3.523972 ACCCTTAAACTCTCTCCCAATCC 59.476 47.826 0.00 0.00 0.00 3.01
516 526 3.783082 CCCTTAAACTCTCTCCCAATCCT 59.217 47.826 0.00 0.00 0.00 3.24
517 527 4.141597 CCCTTAAACTCTCTCCCAATCCTC 60.142 50.000 0.00 0.00 0.00 3.71
518 528 4.471386 CCTTAAACTCTCTCCCAATCCTCA 59.529 45.833 0.00 0.00 0.00 3.86
519 529 5.045578 CCTTAAACTCTCTCCCAATCCTCAA 60.046 44.000 0.00 0.00 0.00 3.02
520 530 6.448369 TTAAACTCTCTCCCAATCCTCAAA 57.552 37.500 0.00 0.00 0.00 2.69
521 531 5.324832 AAACTCTCTCCCAATCCTCAAAA 57.675 39.130 0.00 0.00 0.00 2.44
522 532 4.566426 ACTCTCTCCCAATCCTCAAAAG 57.434 45.455 0.00 0.00 0.00 2.27
523 533 3.913163 ACTCTCTCCCAATCCTCAAAAGT 59.087 43.478 0.00 0.00 0.00 2.66
524 534 5.094387 ACTCTCTCCCAATCCTCAAAAGTA 58.906 41.667 0.00 0.00 0.00 2.24
525 535 5.548056 ACTCTCTCCCAATCCTCAAAAGTAA 59.452 40.000 0.00 0.00 0.00 2.24
526 536 6.054860 TCTCTCCCAATCCTCAAAAGTAAG 57.945 41.667 0.00 0.00 0.00 2.34
527 537 5.045578 TCTCTCCCAATCCTCAAAAGTAAGG 60.046 44.000 0.00 0.00 0.00 2.69
528 538 4.018415 TCTCCCAATCCTCAAAAGTAAGGG 60.018 45.833 0.00 0.00 33.21 3.95
529 539 3.660669 TCCCAATCCTCAAAAGTAAGGGT 59.339 43.478 0.00 0.00 35.31 4.34
530 540 4.107311 TCCCAATCCTCAAAAGTAAGGGTT 59.893 41.667 0.00 0.00 36.39 4.11
532 542 5.391312 CAATCCTCAAAAGTAAGGGTTGG 57.609 43.478 6.52 0.00 45.94 3.77
533 543 3.518992 TCCTCAAAAGTAAGGGTTGGG 57.481 47.619 0.00 0.00 33.21 4.12
534 544 2.109304 TCCTCAAAAGTAAGGGTTGGGG 59.891 50.000 0.00 0.00 43.21 4.96
535 545 2.109304 CCTCAAAAGTAAGGGTTGGGGA 59.891 50.000 0.00 0.00 44.39 4.81
536 546 3.421844 CTCAAAAGTAAGGGTTGGGGAG 58.578 50.000 0.00 0.00 0.00 4.30
537 547 1.893137 CAAAAGTAAGGGTTGGGGAGC 59.107 52.381 0.00 0.00 0.00 4.70
538 548 1.154430 AAAGTAAGGGTTGGGGAGCA 58.846 50.000 0.00 0.00 0.00 4.26
539 549 1.154430 AAGTAAGGGTTGGGGAGCAA 58.846 50.000 0.00 0.00 0.00 3.91
540 550 1.154430 AGTAAGGGTTGGGGAGCAAA 58.846 50.000 0.00 0.00 0.00 3.68
541 551 1.501604 AGTAAGGGTTGGGGAGCAAAA 59.498 47.619 0.00 0.00 0.00 2.44
542 552 1.616865 GTAAGGGTTGGGGAGCAAAAC 59.383 52.381 0.00 0.00 0.00 2.43
543 553 0.762842 AAGGGTTGGGGAGCAAAACC 60.763 55.000 0.00 0.00 42.21 3.27
544 554 1.152333 GGGTTGGGGAGCAAAACCT 60.152 57.895 4.00 0.00 42.50 3.50
545 555 0.113580 GGGTTGGGGAGCAAAACCTA 59.886 55.000 4.00 0.00 42.50 3.08
546 556 1.254026 GGTTGGGGAGCAAAACCTAC 58.746 55.000 0.00 0.00 40.22 3.18
547 557 1.254026 GTTGGGGAGCAAAACCTACC 58.746 55.000 0.00 0.00 34.88 3.18
549 559 4.757773 GGGAGCAAAACCTACCCC 57.242 61.111 0.00 0.00 35.00 4.95
550 560 1.771646 GGGAGCAAAACCTACCCCA 59.228 57.895 0.00 0.00 35.00 4.96
551 561 0.113580 GGGAGCAAAACCTACCCCAA 59.886 55.000 0.00 0.00 35.00 4.12
552 562 1.254026 GGAGCAAAACCTACCCCAAC 58.746 55.000 0.00 0.00 0.00 3.77
553 563 1.254026 GAGCAAAACCTACCCCAACC 58.746 55.000 0.00 0.00 0.00 3.77
554 564 0.178944 AGCAAAACCTACCCCAACCC 60.179 55.000 0.00 0.00 0.00 4.11
555 565 0.178944 GCAAAACCTACCCCAACCCT 60.179 55.000 0.00 0.00 0.00 4.34
556 566 1.919240 CAAAACCTACCCCAACCCTC 58.081 55.000 0.00 0.00 0.00 4.30
557 567 1.146152 CAAAACCTACCCCAACCCTCA 59.854 52.381 0.00 0.00 0.00 3.86
558 568 1.768265 AAACCTACCCCAACCCTCAT 58.232 50.000 0.00 0.00 0.00 2.90
559 569 1.768265 AACCTACCCCAACCCTCATT 58.232 50.000 0.00 0.00 0.00 2.57
560 570 1.768265 ACCTACCCCAACCCTCATTT 58.232 50.000 0.00 0.00 0.00 2.32
561 571 1.357761 ACCTACCCCAACCCTCATTTG 59.642 52.381 0.00 0.00 0.00 2.32
562 572 1.341976 CCTACCCCAACCCTCATTTGG 60.342 57.143 0.00 0.00 42.90 3.28
563 573 0.040499 TACCCCAACCCTCATTTGGC 59.960 55.000 0.00 0.00 42.06 4.52
564 574 2.350458 CCCCAACCCTCATTTGGCG 61.350 63.158 0.00 0.00 42.06 5.69
565 575 2.350458 CCCAACCCTCATTTGGCGG 61.350 63.158 0.00 0.00 42.06 6.13
566 576 1.606313 CCAACCCTCATTTGGCGGT 60.606 57.895 0.00 0.00 37.31 5.68
567 577 1.184970 CCAACCCTCATTTGGCGGTT 61.185 55.000 0.00 0.00 37.31 4.44
568 578 1.540267 CAACCCTCATTTGGCGGTTA 58.460 50.000 0.00 0.00 36.45 2.85
569 579 2.099405 CAACCCTCATTTGGCGGTTAT 58.901 47.619 0.00 0.00 36.45 1.89
570 580 3.283751 CAACCCTCATTTGGCGGTTATA 58.716 45.455 0.00 0.00 36.45 0.98
571 581 2.927028 ACCCTCATTTGGCGGTTATAC 58.073 47.619 0.00 0.00 0.00 1.47
572 582 2.508300 ACCCTCATTTGGCGGTTATACT 59.492 45.455 0.00 0.00 0.00 2.12
573 583 3.139077 CCCTCATTTGGCGGTTATACTC 58.861 50.000 0.00 0.00 0.00 2.59
574 584 2.800544 CCTCATTTGGCGGTTATACTCG 59.199 50.000 0.00 0.00 0.00 4.18
579 589 3.392440 GCGGTTATACTCGCGCGG 61.392 66.667 31.69 22.52 42.48 6.46
580 590 2.728383 CGGTTATACTCGCGCGGG 60.728 66.667 31.23 31.23 0.00 6.13
581 591 2.723746 GGTTATACTCGCGCGGGA 59.276 61.111 39.76 25.06 0.00 5.14
582 592 1.371389 GGTTATACTCGCGCGGGAG 60.371 63.158 40.95 40.95 39.97 4.30
583 593 1.371389 GTTATACTCGCGCGGGAGG 60.371 63.158 43.26 29.96 38.39 4.30
584 594 2.558286 TTATACTCGCGCGGGAGGG 61.558 63.158 43.26 28.40 46.83 4.30
591 601 3.209812 GCGCGGGAGGGGAAAATC 61.210 66.667 8.83 0.00 43.89 2.17
592 602 2.516225 CGCGGGAGGGGAAAATCC 60.516 66.667 0.00 0.00 39.41 3.01
593 603 3.007542 GCGGGAGGGGAAAATCCT 58.992 61.111 0.00 0.00 36.57 3.24
603 613 2.145397 GGAAAATCCTCCCAACTCCC 57.855 55.000 0.00 0.00 32.53 4.30
604 614 1.682087 GGAAAATCCTCCCAACTCCCG 60.682 57.143 0.00 0.00 32.53 5.14
605 615 0.323451 AAAATCCTCCCAACTCCCGC 60.323 55.000 0.00 0.00 0.00 6.13
606 616 2.536997 AAATCCTCCCAACTCCCGCG 62.537 60.000 0.00 0.00 0.00 6.46
643 653 4.208686 CTGCTAGTCGCCCCCGTC 62.209 72.222 0.00 0.00 38.05 4.79
697 707 2.159181 GACAACGTCGTTCATGGGG 58.841 57.895 7.86 0.00 0.00 4.96
698 708 0.320073 GACAACGTCGTTCATGGGGA 60.320 55.000 7.86 0.00 0.00 4.81
699 709 0.107081 ACAACGTCGTTCATGGGGAA 59.893 50.000 7.86 0.00 0.00 3.97
700 710 1.271163 ACAACGTCGTTCATGGGGAAT 60.271 47.619 7.86 0.00 37.93 3.01
701 711 2.027929 ACAACGTCGTTCATGGGGAATA 60.028 45.455 7.86 0.00 37.93 1.75
702 712 3.202906 CAACGTCGTTCATGGGGAATAT 58.797 45.455 7.86 0.00 37.93 1.28
703 713 3.553828 ACGTCGTTCATGGGGAATATT 57.446 42.857 0.00 0.00 37.93 1.28
704 714 3.463944 ACGTCGTTCATGGGGAATATTC 58.536 45.455 6.93 6.93 37.93 1.75
705 715 2.806244 CGTCGTTCATGGGGAATATTCC 59.194 50.000 24.14 24.14 46.82 3.01
719 729 6.812879 GGAATATTCCGTTATAAGGGTTGG 57.187 41.667 18.61 3.35 37.65 3.77
720 730 5.708697 GGAATATTCCGTTATAAGGGTTGGG 59.291 44.000 18.61 1.31 37.65 4.12
721 731 5.917545 ATATTCCGTTATAAGGGTTGGGT 57.082 39.130 20.71 8.63 35.51 4.51
722 732 4.596354 ATTCCGTTATAAGGGTTGGGTT 57.404 40.909 20.71 2.17 35.51 4.11
723 733 4.385478 TTCCGTTATAAGGGTTGGGTTT 57.615 40.909 20.71 0.00 35.51 3.27
724 734 3.688235 TCCGTTATAAGGGTTGGGTTTG 58.312 45.455 20.71 0.00 35.51 2.93
725 735 3.330110 TCCGTTATAAGGGTTGGGTTTGA 59.670 43.478 20.71 0.00 35.51 2.69
726 736 3.692593 CCGTTATAAGGGTTGGGTTTGAG 59.307 47.826 14.83 0.00 0.00 3.02
727 737 3.692593 CGTTATAAGGGTTGGGTTTGAGG 59.307 47.826 0.00 0.00 0.00 3.86
728 738 2.919772 ATAAGGGTTGGGTTTGAGGG 57.080 50.000 0.00 0.00 0.00 4.30
729 739 1.536644 TAAGGGTTGGGTTTGAGGGT 58.463 50.000 0.00 0.00 0.00 4.34
730 740 0.639943 AAGGGTTGGGTTTGAGGGTT 59.360 50.000 0.00 0.00 0.00 4.11
731 741 0.187606 AGGGTTGGGTTTGAGGGTTC 59.812 55.000 0.00 0.00 0.00 3.62
732 742 0.187606 GGGTTGGGTTTGAGGGTTCT 59.812 55.000 0.00 0.00 0.00 3.01
733 743 1.426215 GGGTTGGGTTTGAGGGTTCTA 59.574 52.381 0.00 0.00 0.00 2.10
734 744 2.158430 GGGTTGGGTTTGAGGGTTCTAA 60.158 50.000 0.00 0.00 0.00 2.10
735 745 3.501568 GGGTTGGGTTTGAGGGTTCTAAT 60.502 47.826 0.00 0.00 0.00 1.73
736 746 3.762288 GGTTGGGTTTGAGGGTTCTAATC 59.238 47.826 0.00 0.00 0.00 1.75
737 747 4.508584 GGTTGGGTTTGAGGGTTCTAATCT 60.509 45.833 0.00 0.00 0.00 2.40
738 748 5.077564 GTTGGGTTTGAGGGTTCTAATCTT 58.922 41.667 0.00 0.00 0.00 2.40
739 749 5.333566 TGGGTTTGAGGGTTCTAATCTTT 57.666 39.130 0.00 0.00 0.00 2.52
740 750 5.076873 TGGGTTTGAGGGTTCTAATCTTTG 58.923 41.667 0.00 0.00 0.00 2.77
741 751 4.082190 GGGTTTGAGGGTTCTAATCTTTGC 60.082 45.833 0.00 0.00 0.00 3.68
742 752 4.082190 GGTTTGAGGGTTCTAATCTTTGCC 60.082 45.833 0.00 0.00 0.00 4.52
743 753 3.366052 TGAGGGTTCTAATCTTTGCCC 57.634 47.619 0.00 0.00 36.46 5.36
744 754 2.025321 TGAGGGTTCTAATCTTTGCCCC 60.025 50.000 0.00 0.00 36.86 5.80
745 755 2.242452 GAGGGTTCTAATCTTTGCCCCT 59.758 50.000 0.00 0.00 43.62 4.79
746 756 2.024941 AGGGTTCTAATCTTTGCCCCTG 60.025 50.000 0.00 0.00 39.51 4.45
747 757 2.291605 GGGTTCTAATCTTTGCCCCTGT 60.292 50.000 0.00 0.00 0.00 4.00
748 758 3.431415 GGTTCTAATCTTTGCCCCTGTT 58.569 45.455 0.00 0.00 0.00 3.16
749 759 3.832490 GGTTCTAATCTTTGCCCCTGTTT 59.168 43.478 0.00 0.00 0.00 2.83
750 760 4.283467 GGTTCTAATCTTTGCCCCTGTTTT 59.717 41.667 0.00 0.00 0.00 2.43
751 761 5.221641 GGTTCTAATCTTTGCCCCTGTTTTT 60.222 40.000 0.00 0.00 0.00 1.94
752 762 5.722021 TCTAATCTTTGCCCCTGTTTTTC 57.278 39.130 0.00 0.00 0.00 2.29
753 763 5.144100 TCTAATCTTTGCCCCTGTTTTTCA 58.856 37.500 0.00 0.00 0.00 2.69
754 764 4.769345 AATCTTTGCCCCTGTTTTTCAA 57.231 36.364 0.00 0.00 0.00 2.69
755 765 4.980339 ATCTTTGCCCCTGTTTTTCAAT 57.020 36.364 0.00 0.00 0.00 2.57
756 766 4.335400 TCTTTGCCCCTGTTTTTCAATC 57.665 40.909 0.00 0.00 0.00 2.67
757 767 3.070878 TCTTTGCCCCTGTTTTTCAATCC 59.929 43.478 0.00 0.00 0.00 3.01
758 768 0.965439 TGCCCCTGTTTTTCAATCCG 59.035 50.000 0.00 0.00 0.00 4.18
759 769 0.966179 GCCCCTGTTTTTCAATCCGT 59.034 50.000 0.00 0.00 0.00 4.69
760 770 2.164338 GCCCCTGTTTTTCAATCCGTA 58.836 47.619 0.00 0.00 0.00 4.02
761 771 2.559231 GCCCCTGTTTTTCAATCCGTAA 59.441 45.455 0.00 0.00 0.00 3.18
762 772 3.006003 GCCCCTGTTTTTCAATCCGTAAA 59.994 43.478 0.00 0.00 0.00 2.01
763 773 4.501743 GCCCCTGTTTTTCAATCCGTAAAA 60.502 41.667 0.00 0.00 0.00 1.52
764 774 5.227152 CCCCTGTTTTTCAATCCGTAAAAG 58.773 41.667 0.00 0.00 0.00 2.27
765 775 5.221362 CCCCTGTTTTTCAATCCGTAAAAGT 60.221 40.000 0.00 0.00 0.00 2.66
766 776 5.689961 CCCTGTTTTTCAATCCGTAAAAGTG 59.310 40.000 0.00 0.00 0.00 3.16
767 777 5.174943 CCTGTTTTTCAATCCGTAAAAGTGC 59.825 40.000 0.00 0.00 0.00 4.40
768 778 5.651530 TGTTTTTCAATCCGTAAAAGTGCA 58.348 33.333 0.00 0.00 0.00 4.57
769 779 5.517054 TGTTTTTCAATCCGTAAAAGTGCAC 59.483 36.000 9.40 9.40 0.00 4.57
770 780 4.902443 TTTCAATCCGTAAAAGTGCACA 57.098 36.364 21.04 0.00 0.00 4.57
771 781 4.902443 TTCAATCCGTAAAAGTGCACAA 57.098 36.364 21.04 0.00 0.00 3.33
772 782 4.902443 TCAATCCGTAAAAGTGCACAAA 57.098 36.364 21.04 0.00 0.00 2.83
773 783 5.250235 TCAATCCGTAAAAGTGCACAAAA 57.750 34.783 21.04 0.00 0.00 2.44
774 784 5.651530 TCAATCCGTAAAAGTGCACAAAAA 58.348 33.333 21.04 0.00 0.00 1.94
775 785 5.746245 TCAATCCGTAAAAGTGCACAAAAAG 59.254 36.000 21.04 5.47 0.00 2.27
776 786 4.966965 TCCGTAAAAGTGCACAAAAAGA 57.033 36.364 21.04 3.79 0.00 2.52
777 787 5.508200 TCCGTAAAAGTGCACAAAAAGAT 57.492 34.783 21.04 0.13 0.00 2.40
778 788 5.516090 TCCGTAAAAGTGCACAAAAAGATC 58.484 37.500 21.04 0.76 0.00 2.75
779 789 5.066634 TCCGTAAAAGTGCACAAAAAGATCA 59.933 36.000 21.04 0.00 0.00 2.92
780 790 5.920273 CCGTAAAAGTGCACAAAAAGATCAT 59.080 36.000 21.04 0.00 0.00 2.45
781 791 6.420604 CCGTAAAAGTGCACAAAAAGATCATT 59.579 34.615 21.04 0.00 0.00 2.57
782 792 7.042791 CCGTAAAAGTGCACAAAAAGATCATTT 60.043 33.333 21.04 3.54 0.00 2.32
783 793 8.327429 CGTAAAAGTGCACAAAAAGATCATTTT 58.673 29.630 21.04 14.21 32.89 1.82
784 794 9.986833 GTAAAAGTGCACAAAAAGATCATTTTT 57.013 25.926 21.04 13.73 33.39 1.94
787 797 9.986833 AAAGTGCACAAAAAGATCATTTTTAAC 57.013 25.926 21.04 3.45 30.31 2.01
788 798 8.141835 AGTGCACAAAAAGATCATTTTTAACC 57.858 30.769 21.04 3.82 30.31 2.85
789 799 7.226523 AGTGCACAAAAAGATCATTTTTAACCC 59.773 33.333 21.04 0.00 30.31 4.11
790 800 7.226523 GTGCACAAAAAGATCATTTTTAACCCT 59.773 33.333 13.17 0.00 30.31 4.34
791 801 7.772757 TGCACAAAAAGATCATTTTTAACCCTT 59.227 29.630 5.94 0.00 30.31 3.95
792 802 9.267084 GCACAAAAAGATCATTTTTAACCCTTA 57.733 29.630 5.94 0.00 30.31 2.69
811 821 5.640783 CCCTTAAAACACTAGTAAGGGTTCG 59.359 44.000 24.11 6.61 46.76 3.95
812 822 6.458210 CCTTAAAACACTAGTAAGGGTTCGA 58.542 40.000 12.00 0.00 46.76 3.71
813 823 6.589139 CCTTAAAACACTAGTAAGGGTTCGAG 59.411 42.308 12.00 4.65 46.76 4.04
814 824 5.796424 AAAACACTAGTAAGGGTTCGAGA 57.204 39.130 0.00 0.00 46.76 4.04
815 825 5.388408 AAACACTAGTAAGGGTTCGAGAG 57.612 43.478 0.00 0.00 46.76 3.20
816 826 4.031636 ACACTAGTAAGGGTTCGAGAGT 57.968 45.455 0.00 0.00 35.04 3.24
817 827 4.405548 ACACTAGTAAGGGTTCGAGAGTT 58.594 43.478 0.00 0.00 35.04 3.01
818 828 4.831710 ACACTAGTAAGGGTTCGAGAGTTT 59.168 41.667 0.00 0.00 35.04 2.66
819 829 5.162075 CACTAGTAAGGGTTCGAGAGTTTG 58.838 45.833 0.00 0.00 0.00 2.93
820 830 5.048224 CACTAGTAAGGGTTCGAGAGTTTGA 60.048 44.000 0.00 0.00 0.00 2.69
821 831 4.522722 AGTAAGGGTTCGAGAGTTTGAG 57.477 45.455 0.00 0.00 0.00 3.02
822 832 4.150359 AGTAAGGGTTCGAGAGTTTGAGA 58.850 43.478 0.00 0.00 0.00 3.27
823 833 3.669251 AAGGGTTCGAGAGTTTGAGAG 57.331 47.619 0.00 0.00 0.00 3.20
824 834 2.599677 AGGGTTCGAGAGTTTGAGAGT 58.400 47.619 0.00 0.00 0.00 3.24
825 835 2.966516 AGGGTTCGAGAGTTTGAGAGTT 59.033 45.455 0.00 0.00 0.00 3.01
826 836 3.006003 AGGGTTCGAGAGTTTGAGAGTTC 59.994 47.826 0.00 0.00 0.00 3.01
827 837 3.006003 GGGTTCGAGAGTTTGAGAGTTCT 59.994 47.826 0.00 0.00 0.00 3.01
828 838 4.217983 GGGTTCGAGAGTTTGAGAGTTCTA 59.782 45.833 0.00 0.00 0.00 2.10
829 839 5.155643 GGTTCGAGAGTTTGAGAGTTCTAC 58.844 45.833 0.00 0.00 0.00 2.59
830 840 5.048573 GGTTCGAGAGTTTGAGAGTTCTACT 60.049 44.000 0.00 0.00 0.00 2.57
831 841 6.149142 GGTTCGAGAGTTTGAGAGTTCTACTA 59.851 42.308 0.00 0.00 0.00 1.82
832 842 6.971527 TCGAGAGTTTGAGAGTTCTACTAG 57.028 41.667 0.00 0.00 0.00 2.57
833 843 6.465948 TCGAGAGTTTGAGAGTTCTACTAGT 58.534 40.000 0.00 0.00 0.00 2.57
834 844 7.609960 TCGAGAGTTTGAGAGTTCTACTAGTA 58.390 38.462 1.89 1.89 0.00 1.82
835 845 8.093307 TCGAGAGTTTGAGAGTTCTACTAGTAA 58.907 37.037 3.76 0.00 0.00 2.24
921 931 3.022406 GCAAAGCAGAGGATCCAGAAAT 58.978 45.455 15.82 0.00 33.66 2.17
940 951 8.951243 CCAGAAATAGTTAAGAAAAGAAGGAGG 58.049 37.037 0.00 0.00 0.00 4.30
977 989 6.833933 AGCATTTTTCCTATAAATCCCGACTT 59.166 34.615 0.00 0.00 0.00 3.01
1017 1029 1.151450 CAGCTCAACCAACCCCTGT 59.849 57.895 0.00 0.00 0.00 4.00
1336 1389 3.216292 AACACACGCACAAGGCCC 61.216 61.111 0.00 0.00 40.31 5.80
1397 1453 1.367471 CAGGTCACCAAGTCAGCGA 59.633 57.895 0.00 0.00 0.00 4.93
1513 1569 3.068691 CCTTCGACAGCCCGGAGA 61.069 66.667 0.73 0.00 37.34 3.71
1856 1929 2.113986 GTGCTGGAGCCACCACTT 59.886 61.111 7.54 0.00 44.64 3.16
1936 2009 5.005107 GCTGTTTTTCTCTTTCTTGTTGCTG 59.995 40.000 0.00 0.00 0.00 4.41
1939 2012 1.609208 TCTCTTTCTTGTTGCTGGGC 58.391 50.000 0.00 0.00 0.00 5.36
2005 2212 4.785511 TTGAGGAAACCGTTTGTGAAAA 57.214 36.364 0.00 0.00 0.00 2.29
2018 2225 1.522806 TGAAAACGACGGCTGTGCT 60.523 52.632 0.80 0.00 0.00 4.40
2037 2244 1.756538 CTGGTTTGGTTTGGAAGTGCT 59.243 47.619 0.00 0.00 0.00 4.40
2038 2245 1.480137 TGGTTTGGTTTGGAAGTGCTG 59.520 47.619 0.00 0.00 0.00 4.41
2048 2255 6.041409 TGGTTTGGAAGTGCTGATTATTTTGA 59.959 34.615 0.00 0.00 0.00 2.69
2074 2294 8.737168 TTTGAATTAGGTCAGGTCAATATGAG 57.263 34.615 0.00 0.00 0.00 2.90
2105 2329 0.321996 GACCCTCTTGTTTCCTCGCT 59.678 55.000 0.00 0.00 0.00 4.93
2114 2338 4.040706 TCTTGTTTCCTCGCTTAACCCTAA 59.959 41.667 0.00 0.00 0.00 2.69
2143 2367 0.110486 GCAAACTCTCCCCACCAGAA 59.890 55.000 0.00 0.00 0.00 3.02
2147 2371 2.044793 ACTCTCCCCACCAGAATTCA 57.955 50.000 8.44 0.00 0.00 2.57
2148 2372 2.566746 ACTCTCCCCACCAGAATTCAT 58.433 47.619 8.44 0.00 0.00 2.57
2154 2378 1.340017 CCCACCAGAATTCATCGGTGT 60.340 52.381 26.81 7.83 44.33 4.16
2155 2379 1.739466 CCACCAGAATTCATCGGTGTG 59.261 52.381 26.81 19.17 44.33 3.82
2169 2393 0.949105 GGTGTGTCCGTGAATTCGCT 60.949 55.000 16.53 0.00 0.00 4.93
2172 2396 1.529438 TGTGTCCGTGAATTCGCTTTC 59.471 47.619 16.53 7.20 0.00 2.62
2174 2398 1.270625 TGTCCGTGAATTCGCTTTCCT 60.271 47.619 16.53 0.00 0.00 3.36
2176 2400 0.727398 CCGTGAATTCGCTTTCCTCC 59.273 55.000 16.53 0.00 0.00 4.30
2177 2401 0.727398 CGTGAATTCGCTTTCCTCCC 59.273 55.000 16.53 0.00 0.00 4.30
2178 2402 1.676014 CGTGAATTCGCTTTCCTCCCT 60.676 52.381 16.53 0.00 0.00 4.20
2179 2403 1.740025 GTGAATTCGCTTTCCTCCCTG 59.260 52.381 11.80 0.00 0.00 4.45
2193 2458 4.154347 CCTGCCCGCCTCTCTGAC 62.154 72.222 0.00 0.00 0.00 3.51
2216 2481 1.839894 GATGGCGAGGAGGGGAATT 59.160 57.895 0.00 0.00 0.00 2.17
2300 3221 3.739613 GTGGCGGGGAGGGGAATT 61.740 66.667 0.00 0.00 0.00 2.17
2342 3348 2.897350 CTGGCGCGAAGGGGAATC 60.897 66.667 12.10 0.00 42.39 2.52
2343 3349 4.483243 TGGCGCGAAGGGGAATCC 62.483 66.667 12.10 0.00 42.39 3.01
2355 3361 1.635817 GGGAATCCTGCAGGTGCCTA 61.636 60.000 31.58 13.35 41.18 3.93
2377 3383 5.972107 ACGCTCTGGTTAGTAGTTTAGAA 57.028 39.130 0.00 0.00 0.00 2.10
2380 3386 8.059798 ACGCTCTGGTTAGTAGTTTAGAATAA 57.940 34.615 0.00 0.00 0.00 1.40
2447 3453 5.678871 GCCCTTTTTCTTCGAGTTTGTCTTT 60.679 40.000 0.00 0.00 0.00 2.52
2453 3459 0.105224 TCGAGTTTGTCTTTCGGGCA 59.895 50.000 0.00 0.00 35.21 5.36
2502 3508 0.602106 CGTAGTCGATAGGGCTCCGA 60.602 60.000 0.00 0.00 39.71 4.55
2528 3534 4.097418 AGATTCCTATCGTATCCTTGGGG 58.903 47.826 0.00 0.00 35.85 4.96
2530 3536 1.132977 TCCTATCGTATCCTTGGGGCA 60.133 52.381 0.00 0.00 0.00 5.36
2548 3554 2.224793 GGCAGTGAGGTTAGGGTTTCTT 60.225 50.000 0.00 0.00 0.00 2.52
2557 3563 3.057526 GGTTAGGGTTTCTTGTCATGTGC 60.058 47.826 0.00 0.00 0.00 4.57
2558 3564 2.664402 AGGGTTTCTTGTCATGTGCT 57.336 45.000 0.00 0.00 0.00 4.40
2565 3571 5.388944 GTTTCTTGTCATGTGCTGAGATTC 58.611 41.667 0.00 0.00 33.51 2.52
2569 3575 3.332034 TGTCATGTGCTGAGATTCTGTG 58.668 45.455 0.00 0.00 33.51 3.66
2577 3583 2.354109 TGAGATTCTGTGTCAGACGC 57.646 50.000 7.20 7.20 40.46 5.19
2582 3588 2.595124 TTCTGTGTCAGACGCTTCAA 57.405 45.000 15.17 2.80 40.46 2.69
2585 3591 3.466836 TCTGTGTCAGACGCTTCAAATT 58.533 40.909 15.17 0.00 35.39 1.82
2586 3592 3.494626 TCTGTGTCAGACGCTTCAAATTC 59.505 43.478 15.17 0.00 35.39 2.17
2588 3594 3.625313 TGTGTCAGACGCTTCAAATTCAA 59.375 39.130 15.17 0.00 0.00 2.69
2589 3595 3.968724 GTGTCAGACGCTTCAAATTCAAC 59.031 43.478 6.88 0.00 0.00 3.18
2591 3597 2.223144 TCAGACGCTTCAAATTCAACGG 59.777 45.455 0.00 0.00 0.00 4.44
2592 3598 2.032030 CAGACGCTTCAAATTCAACGGT 60.032 45.455 0.00 0.00 0.00 4.83
2593 3599 2.616842 AGACGCTTCAAATTCAACGGTT 59.383 40.909 0.00 0.00 0.00 4.44
2594 3600 2.971261 GACGCTTCAAATTCAACGGTTC 59.029 45.455 0.00 0.00 0.00 3.62
2595 3601 2.356382 ACGCTTCAAATTCAACGGTTCA 59.644 40.909 0.00 0.00 0.00 3.18
2596 3602 3.181495 ACGCTTCAAATTCAACGGTTCAA 60.181 39.130 0.00 0.00 0.00 2.69
2598 3604 4.143556 CGCTTCAAATTCAACGGTTCAATG 60.144 41.667 0.00 0.00 0.00 2.82
2599 3605 4.376311 GCTTCAAATTCAACGGTTCAATGC 60.376 41.667 0.00 0.00 0.00 3.56
2658 3724 0.249911 GTGCACGAAGACTTCCCAGT 60.250 55.000 9.63 0.00 35.17 4.00
2667 3733 1.276421 AGACTTCCCAGTTGTCATCGG 59.724 52.381 0.00 0.00 31.22 4.18
2669 3735 1.420138 ACTTCCCAGTTGTCATCGGTT 59.580 47.619 0.00 0.00 0.00 4.44
2672 3738 2.531771 TCCCAGTTGTCATCGGTTAGA 58.468 47.619 0.00 0.00 0.00 2.10
2676 3742 3.865745 CCAGTTGTCATCGGTTAGATCAC 59.134 47.826 0.00 0.00 37.52 3.06
2678 3744 3.192844 AGTTGTCATCGGTTAGATCACGT 59.807 43.478 0.00 0.00 32.55 4.49
2685 3751 1.135083 CGGTTAGATCACGTTGGCTCT 60.135 52.381 0.00 0.00 0.00 4.09
2686 3752 2.271800 GGTTAGATCACGTTGGCTCTG 58.728 52.381 0.00 0.00 0.00 3.35
2687 3753 2.094182 GGTTAGATCACGTTGGCTCTGA 60.094 50.000 0.00 0.00 0.00 3.27
2696 3762 1.482593 CGTTGGCTCTGATAAGGGAGT 59.517 52.381 0.00 0.00 32.67 3.85
2697 3763 2.482142 CGTTGGCTCTGATAAGGGAGTC 60.482 54.545 0.00 0.00 35.07 3.36
2703 3769 3.017442 CTCTGATAAGGGAGTCGTGACA 58.983 50.000 2.44 0.00 0.00 3.58
2706 3784 2.894765 TGATAAGGGAGTCGTGACAACA 59.105 45.455 2.44 0.00 0.00 3.33
2710 3788 0.249911 GGGAGTCGTGACAACAGCTT 60.250 55.000 2.44 0.00 0.00 3.74
2711 3789 1.140816 GGAGTCGTGACAACAGCTTC 58.859 55.000 2.44 0.00 0.00 3.86
2723 3801 3.002791 CAACAGCTTCTTCTATCGGCAA 58.997 45.455 0.00 0.00 0.00 4.52
2736 3814 0.604073 TCGGCAATAGTGGTCGTTCA 59.396 50.000 0.00 0.00 0.00 3.18
2737 3815 0.999406 CGGCAATAGTGGTCGTTCAG 59.001 55.000 0.00 0.00 0.00 3.02
2743 3821 1.870055 TAGTGGTCGTTCAGCGGTCC 61.870 60.000 0.00 0.00 41.72 4.46
2744 3822 3.228017 TGGTCGTTCAGCGGTCCA 61.228 61.111 0.00 0.00 40.39 4.02
2749 3827 0.599204 TCGTTCAGCGGTCCAGAAAC 60.599 55.000 0.00 0.00 41.72 2.78
2816 3896 9.702726 CGGTGAACTTTTATAACAGTTATGATG 57.297 33.333 15.28 8.70 33.22 3.07
2885 3966 2.362397 CCTGCCTCACGTATATGACACT 59.638 50.000 0.00 0.00 0.00 3.55
2910 3991 4.320202 GCGCCAAGTTTGAATCTCTTTACA 60.320 41.667 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 8.512966 AGGGTAAAATCTGAAGAGAAAATAGC 57.487 34.615 0.00 0.00 0.00 2.97
23 24 8.443953 CCTTATGAAGGGTAAAATCTGAAGAG 57.556 38.462 0.00 0.00 45.27 2.85
47 48 6.652900 GGAGTTTTGGCTTCTCATATAGATCC 59.347 42.308 0.00 0.00 33.05 3.36
48 49 7.220030 TGGAGTTTTGGCTTCTCATATAGATC 58.780 38.462 0.00 0.00 33.05 2.75
51 52 6.769822 ACATGGAGTTTTGGCTTCTCATATAG 59.230 38.462 0.00 0.00 0.00 1.31
60 66 2.624838 CACAGACATGGAGTTTTGGCTT 59.375 45.455 0.00 0.00 0.00 4.35
99 105 1.004918 GGCACTACTGGCAACTCGT 60.005 57.895 0.00 0.00 42.66 4.18
108 114 3.366679 CCAGAAATTTGCTGGCACTACTG 60.367 47.826 10.59 6.51 45.66 2.74
117 123 7.967178 GGATGTTAAAATCCAGAAATTTGCTG 58.033 34.615 18.45 3.19 44.85 4.41
199 206 6.610741 GGATGCTAAAATCCAGAACTACTG 57.389 41.667 0.00 0.00 44.85 2.74
256 265 9.077885 ACAGCCAAATAAAAACTCTAGAAATCA 57.922 29.630 0.00 0.00 0.00 2.57
358 368 5.278758 GGCTCTACTGGTAATGCTCTAAGAG 60.279 48.000 0.00 0.00 0.00 2.85
359 369 4.585162 GGCTCTACTGGTAATGCTCTAAGA 59.415 45.833 0.00 0.00 0.00 2.10
360 370 4.262249 GGGCTCTACTGGTAATGCTCTAAG 60.262 50.000 0.00 0.00 0.00 2.18
361 371 3.641906 GGGCTCTACTGGTAATGCTCTAA 59.358 47.826 0.00 0.00 0.00 2.10
362 372 3.117093 AGGGCTCTACTGGTAATGCTCTA 60.117 47.826 0.00 0.00 28.59 2.43
363 373 2.043227 GGGCTCTACTGGTAATGCTCT 58.957 52.381 0.00 0.00 0.00 4.09
364 374 2.036604 GAGGGCTCTACTGGTAATGCTC 59.963 54.545 0.00 0.00 0.00 4.26
365 375 2.043227 GAGGGCTCTACTGGTAATGCT 58.957 52.381 0.00 0.00 0.00 3.79
366 376 1.762957 TGAGGGCTCTACTGGTAATGC 59.237 52.381 0.00 0.00 0.00 3.56
367 377 4.192317 GTTTGAGGGCTCTACTGGTAATG 58.808 47.826 0.00 0.00 0.00 1.90
368 378 3.200165 GGTTTGAGGGCTCTACTGGTAAT 59.800 47.826 0.00 0.00 0.00 1.89
369 379 2.570302 GGTTTGAGGGCTCTACTGGTAA 59.430 50.000 0.00 0.00 0.00 2.85
370 380 2.185387 GGTTTGAGGGCTCTACTGGTA 58.815 52.381 0.00 0.00 0.00 3.25
371 381 0.984995 GGTTTGAGGGCTCTACTGGT 59.015 55.000 0.00 0.00 0.00 4.00
372 382 0.253327 GGGTTTGAGGGCTCTACTGG 59.747 60.000 0.00 0.00 0.00 4.00
373 383 1.208293 GAGGGTTTGAGGGCTCTACTG 59.792 57.143 0.00 0.00 0.00 2.74
374 384 1.203313 TGAGGGTTTGAGGGCTCTACT 60.203 52.381 0.00 0.00 0.00 2.57
375 385 1.276622 TGAGGGTTTGAGGGCTCTAC 58.723 55.000 0.00 0.00 0.00 2.59
376 386 2.038863 TTGAGGGTTTGAGGGCTCTA 57.961 50.000 0.00 0.00 0.00 2.43
377 387 1.149101 TTTGAGGGTTTGAGGGCTCT 58.851 50.000 0.00 0.00 0.00 4.09
378 388 1.248486 GTTTGAGGGTTTGAGGGCTC 58.752 55.000 0.00 0.00 0.00 4.70
379 389 0.178961 GGTTTGAGGGTTTGAGGGCT 60.179 55.000 0.00 0.00 0.00 5.19
380 390 1.185618 GGGTTTGAGGGTTTGAGGGC 61.186 60.000 0.00 0.00 0.00 5.19
381 391 0.541998 GGGGTTTGAGGGTTTGAGGG 60.542 60.000 0.00 0.00 0.00 4.30
382 392 0.482887 AGGGGTTTGAGGGTTTGAGG 59.517 55.000 0.00 0.00 0.00 3.86
383 393 3.518992 TTAGGGGTTTGAGGGTTTGAG 57.481 47.619 0.00 0.00 0.00 3.02
384 394 3.975479 TTTAGGGGTTTGAGGGTTTGA 57.025 42.857 0.00 0.00 0.00 2.69
385 395 5.560722 ATTTTTAGGGGTTTGAGGGTTTG 57.439 39.130 0.00 0.00 0.00 2.93
386 396 6.847567 AGTTATTTTTAGGGGTTTGAGGGTTT 59.152 34.615 0.00 0.00 0.00 3.27
387 397 6.269077 CAGTTATTTTTAGGGGTTTGAGGGTT 59.731 38.462 0.00 0.00 0.00 4.11
388 398 5.778241 CAGTTATTTTTAGGGGTTTGAGGGT 59.222 40.000 0.00 0.00 0.00 4.34
389 399 5.778241 ACAGTTATTTTTAGGGGTTTGAGGG 59.222 40.000 0.00 0.00 0.00 4.30
390 400 6.911250 ACAGTTATTTTTAGGGGTTTGAGG 57.089 37.500 0.00 0.00 0.00 3.86
391 401 9.607988 AAAAACAGTTATTTTTAGGGGTTTGAG 57.392 29.630 0.00 0.00 39.43 3.02
434 444 4.837298 AGGGGTTCTAGTCTACGACTTTTT 59.163 41.667 1.45 0.00 40.28 1.94
435 445 4.414677 AGGGGTTCTAGTCTACGACTTTT 58.585 43.478 1.45 0.00 40.28 2.27
436 446 4.044946 AGGGGTTCTAGTCTACGACTTT 57.955 45.455 1.45 0.00 40.28 2.66
437 447 3.735720 AGGGGTTCTAGTCTACGACTT 57.264 47.619 1.45 0.00 40.28 3.01
438 448 3.735720 AAGGGGTTCTAGTCTACGACT 57.264 47.619 1.82 1.82 45.54 4.18
439 449 4.097135 GGTTAAGGGGTTCTAGTCTACGAC 59.903 50.000 0.00 0.00 0.00 4.34
440 450 4.273318 GGTTAAGGGGTTCTAGTCTACGA 58.727 47.826 0.00 0.00 0.00 3.43
441 451 3.382865 GGGTTAAGGGGTTCTAGTCTACG 59.617 52.174 0.00 0.00 0.00 3.51
442 452 4.618635 AGGGTTAAGGGGTTCTAGTCTAC 58.381 47.826 0.00 0.00 0.00 2.59
443 453 4.295775 TGAGGGTTAAGGGGTTCTAGTCTA 59.704 45.833 0.00 0.00 0.00 2.59
444 454 3.078612 TGAGGGTTAAGGGGTTCTAGTCT 59.921 47.826 0.00 0.00 0.00 3.24
445 455 3.447950 TGAGGGTTAAGGGGTTCTAGTC 58.552 50.000 0.00 0.00 0.00 2.59
446 456 3.572661 TGAGGGTTAAGGGGTTCTAGT 57.427 47.619 0.00 0.00 0.00 2.57
447 457 4.567116 GGTTTGAGGGTTAAGGGGTTCTAG 60.567 50.000 0.00 0.00 0.00 2.43
448 458 3.331591 GGTTTGAGGGTTAAGGGGTTCTA 59.668 47.826 0.00 0.00 0.00 2.10
449 459 2.109480 GGTTTGAGGGTTAAGGGGTTCT 59.891 50.000 0.00 0.00 0.00 3.01
450 460 2.522185 GGTTTGAGGGTTAAGGGGTTC 58.478 52.381 0.00 0.00 0.00 3.62
451 461 1.148446 GGGTTTGAGGGTTAAGGGGTT 59.852 52.381 0.00 0.00 0.00 4.11
452 462 0.781920 GGGTTTGAGGGTTAAGGGGT 59.218 55.000 0.00 0.00 0.00 4.95
453 463 1.081481 AGGGTTTGAGGGTTAAGGGG 58.919 55.000 0.00 0.00 0.00 4.79
454 464 2.992847 AAGGGTTTGAGGGTTAAGGG 57.007 50.000 0.00 0.00 0.00 3.95
455 465 6.734502 TTTTTAAGGGTTTGAGGGTTAAGG 57.265 37.500 0.00 0.00 0.00 2.69
486 496 3.583526 GAGAGAGTTTAAGGGTTGGACCT 59.416 47.826 0.00 0.00 44.56 3.85
487 497 3.307550 GGAGAGAGTTTAAGGGTTGGACC 60.308 52.174 0.00 0.00 37.60 4.46
488 498 3.307550 GGGAGAGAGTTTAAGGGTTGGAC 60.308 52.174 0.00 0.00 0.00 4.02
489 499 2.910977 GGGAGAGAGTTTAAGGGTTGGA 59.089 50.000 0.00 0.00 0.00 3.53
490 500 2.642807 TGGGAGAGAGTTTAAGGGTTGG 59.357 50.000 0.00 0.00 0.00 3.77
491 501 4.367039 TTGGGAGAGAGTTTAAGGGTTG 57.633 45.455 0.00 0.00 0.00 3.77
492 502 4.018324 GGATTGGGAGAGAGTTTAAGGGTT 60.018 45.833 0.00 0.00 0.00 4.11
493 503 3.523972 GGATTGGGAGAGAGTTTAAGGGT 59.476 47.826 0.00 0.00 0.00 4.34
494 504 3.783082 AGGATTGGGAGAGAGTTTAAGGG 59.217 47.826 0.00 0.00 0.00 3.95
495 505 4.471386 TGAGGATTGGGAGAGAGTTTAAGG 59.529 45.833 0.00 0.00 0.00 2.69
496 506 5.683876 TGAGGATTGGGAGAGAGTTTAAG 57.316 43.478 0.00 0.00 0.00 1.85
497 507 6.448369 TTTGAGGATTGGGAGAGAGTTTAA 57.552 37.500 0.00 0.00 0.00 1.52
498 508 6.044404 ACTTTTGAGGATTGGGAGAGAGTTTA 59.956 38.462 0.00 0.00 0.00 2.01
499 509 5.163045 ACTTTTGAGGATTGGGAGAGAGTTT 60.163 40.000 0.00 0.00 0.00 2.66
500 510 4.352298 ACTTTTGAGGATTGGGAGAGAGTT 59.648 41.667 0.00 0.00 0.00 3.01
501 511 3.913163 ACTTTTGAGGATTGGGAGAGAGT 59.087 43.478 0.00 0.00 0.00 3.24
502 512 4.566426 ACTTTTGAGGATTGGGAGAGAG 57.434 45.455 0.00 0.00 0.00 3.20
503 513 5.045578 CCTTACTTTTGAGGATTGGGAGAGA 60.046 44.000 0.00 0.00 34.91 3.10
504 514 5.189180 CCTTACTTTTGAGGATTGGGAGAG 58.811 45.833 0.00 0.00 34.91 3.20
505 515 4.018415 CCCTTACTTTTGAGGATTGGGAGA 60.018 45.833 0.00 0.00 34.91 3.71
506 516 4.263949 ACCCTTACTTTTGAGGATTGGGAG 60.264 45.833 0.00 0.00 34.91 4.30
507 517 3.660669 ACCCTTACTTTTGAGGATTGGGA 59.339 43.478 0.00 0.00 34.91 4.37
508 518 4.047627 ACCCTTACTTTTGAGGATTGGG 57.952 45.455 0.00 0.00 34.91 4.12
509 519 4.220602 CCAACCCTTACTTTTGAGGATTGG 59.779 45.833 1.27 1.27 34.91 3.16
510 520 4.220602 CCCAACCCTTACTTTTGAGGATTG 59.779 45.833 0.00 0.00 34.91 2.67
511 521 4.416516 CCCAACCCTTACTTTTGAGGATT 58.583 43.478 0.00 0.00 34.91 3.01
512 522 3.245622 CCCCAACCCTTACTTTTGAGGAT 60.246 47.826 0.00 0.00 34.91 3.24
513 523 2.109304 CCCCAACCCTTACTTTTGAGGA 59.891 50.000 0.00 0.00 34.91 3.71
514 524 2.109304 TCCCCAACCCTTACTTTTGAGG 59.891 50.000 0.00 0.00 0.00 3.86
515 525 3.421844 CTCCCCAACCCTTACTTTTGAG 58.578 50.000 0.00 0.00 0.00 3.02
516 526 2.490168 GCTCCCCAACCCTTACTTTTGA 60.490 50.000 0.00 0.00 0.00 2.69
517 527 1.893137 GCTCCCCAACCCTTACTTTTG 59.107 52.381 0.00 0.00 0.00 2.44
518 528 1.501604 TGCTCCCCAACCCTTACTTTT 59.498 47.619 0.00 0.00 0.00 2.27
519 529 1.154430 TGCTCCCCAACCCTTACTTT 58.846 50.000 0.00 0.00 0.00 2.66
520 530 1.154430 TTGCTCCCCAACCCTTACTT 58.846 50.000 0.00 0.00 0.00 2.24
521 531 1.154430 TTTGCTCCCCAACCCTTACT 58.846 50.000 0.00 0.00 31.97 2.24
522 532 1.616865 GTTTTGCTCCCCAACCCTTAC 59.383 52.381 0.00 0.00 31.97 2.34
523 533 1.481615 GGTTTTGCTCCCCAACCCTTA 60.482 52.381 0.00 0.00 34.90 2.69
524 534 0.762842 GGTTTTGCTCCCCAACCCTT 60.763 55.000 0.00 0.00 34.90 3.95
525 535 1.152333 GGTTTTGCTCCCCAACCCT 60.152 57.895 0.00 0.00 34.90 4.34
526 536 0.113580 TAGGTTTTGCTCCCCAACCC 59.886 55.000 0.00 0.00 40.92 4.11
527 537 1.254026 GTAGGTTTTGCTCCCCAACC 58.746 55.000 0.00 0.00 40.40 3.77
528 538 1.254026 GGTAGGTTTTGCTCCCCAAC 58.746 55.000 0.00 0.00 31.97 3.77
529 539 0.113580 GGGTAGGTTTTGCTCCCCAA 59.886 55.000 0.00 0.00 32.66 4.12
530 540 1.771646 GGGTAGGTTTTGCTCCCCA 59.228 57.895 0.00 0.00 32.66 4.96
531 541 4.757773 GGGTAGGTTTTGCTCCCC 57.242 61.111 0.00 0.00 32.66 4.81
532 542 0.113580 TTGGGGTAGGTTTTGCTCCC 59.886 55.000 0.00 0.00 37.59 4.30
533 543 1.254026 GTTGGGGTAGGTTTTGCTCC 58.746 55.000 0.00 0.00 31.53 4.70
534 544 1.254026 GGTTGGGGTAGGTTTTGCTC 58.746 55.000 0.00 0.00 0.00 4.26
535 545 0.178944 GGGTTGGGGTAGGTTTTGCT 60.179 55.000 0.00 0.00 0.00 3.91
536 546 0.178944 AGGGTTGGGGTAGGTTTTGC 60.179 55.000 0.00 0.00 0.00 3.68
537 547 1.146152 TGAGGGTTGGGGTAGGTTTTG 59.854 52.381 0.00 0.00 0.00 2.44
538 548 1.536644 TGAGGGTTGGGGTAGGTTTT 58.463 50.000 0.00 0.00 0.00 2.43
539 549 1.768265 ATGAGGGTTGGGGTAGGTTT 58.232 50.000 0.00 0.00 0.00 3.27
540 550 1.768265 AATGAGGGTTGGGGTAGGTT 58.232 50.000 0.00 0.00 0.00 3.50
541 551 1.357761 CAAATGAGGGTTGGGGTAGGT 59.642 52.381 0.00 0.00 0.00 3.08
542 552 1.341976 CCAAATGAGGGTTGGGGTAGG 60.342 57.143 0.00 0.00 41.64 3.18
543 553 1.959989 GCCAAATGAGGGTTGGGGTAG 60.960 57.143 5.41 0.00 44.87 3.18
544 554 0.040499 GCCAAATGAGGGTTGGGGTA 59.960 55.000 5.41 0.00 44.87 3.69
545 555 1.229177 GCCAAATGAGGGTTGGGGT 60.229 57.895 5.41 0.00 44.87 4.95
546 556 3.712287 GCCAAATGAGGGTTGGGG 58.288 61.111 5.41 0.00 44.87 4.96
547 557 2.350458 CCGCCAAATGAGGGTTGGG 61.350 63.158 5.41 0.00 44.87 4.12
549 559 1.540267 TAACCGCCAAATGAGGGTTG 58.460 50.000 14.43 0.00 42.44 3.77
550 560 2.525105 ATAACCGCCAAATGAGGGTT 57.475 45.000 11.18 11.18 44.49 4.11
551 561 2.508300 AGTATAACCGCCAAATGAGGGT 59.492 45.455 0.00 0.00 0.00 4.34
552 562 3.139077 GAGTATAACCGCCAAATGAGGG 58.861 50.000 0.00 0.00 0.00 4.30
553 563 2.800544 CGAGTATAACCGCCAAATGAGG 59.199 50.000 0.00 0.00 0.00 3.86
554 564 2.221055 GCGAGTATAACCGCCAAATGAG 59.779 50.000 8.35 0.00 45.06 2.90
555 565 2.206750 GCGAGTATAACCGCCAAATGA 58.793 47.619 8.35 0.00 45.06 2.57
556 566 2.663279 GCGAGTATAACCGCCAAATG 57.337 50.000 8.35 0.00 45.06 2.32
563 573 2.728383 CCCGCGCGAGTATAACCG 60.728 66.667 34.63 10.97 0.00 4.44
564 574 1.371389 CTCCCGCGCGAGTATAACC 60.371 63.158 34.63 0.00 0.00 2.85
565 575 1.371389 CCTCCCGCGCGAGTATAAC 60.371 63.158 34.63 0.00 0.00 1.89
566 576 2.558286 CCCTCCCGCGCGAGTATAA 61.558 63.158 34.63 8.45 0.00 0.98
567 577 2.981909 CCCTCCCGCGCGAGTATA 60.982 66.667 34.63 10.35 0.00 1.47
574 584 3.209812 GATTTTCCCCTCCCGCGC 61.210 66.667 0.00 0.00 0.00 6.86
575 585 2.516225 GGATTTTCCCCTCCCGCG 60.516 66.667 0.00 0.00 0.00 6.46
576 586 1.152943 GAGGATTTTCCCCTCCCGC 60.153 63.158 0.00 0.00 43.37 6.13
584 594 1.682087 CGGGAGTTGGGAGGATTTTCC 60.682 57.143 0.00 0.00 36.58 3.13
585 595 1.751437 CGGGAGTTGGGAGGATTTTC 58.249 55.000 0.00 0.00 0.00 2.29
586 596 0.323451 GCGGGAGTTGGGAGGATTTT 60.323 55.000 0.00 0.00 0.00 1.82
587 597 1.303282 GCGGGAGTTGGGAGGATTT 59.697 57.895 0.00 0.00 0.00 2.17
588 598 2.998949 GCGGGAGTTGGGAGGATT 59.001 61.111 0.00 0.00 0.00 3.01
589 599 3.470888 CGCGGGAGTTGGGAGGAT 61.471 66.667 0.00 0.00 0.00 3.24
679 689 0.320073 TCCCCATGAACGACGTTGTC 60.320 55.000 19.60 5.24 0.00 3.18
680 690 0.107081 TTCCCCATGAACGACGTTGT 59.893 50.000 19.60 1.48 0.00 3.32
681 691 1.448985 ATTCCCCATGAACGACGTTG 58.551 50.000 19.60 4.40 35.31 4.10
682 692 3.553828 ATATTCCCCATGAACGACGTT 57.446 42.857 14.11 14.11 35.31 3.99
683 693 3.463944 GAATATTCCCCATGAACGACGT 58.536 45.455 3.92 0.00 35.31 4.34
684 694 2.806244 GGAATATTCCCCATGAACGACG 59.194 50.000 22.09 0.00 41.62 5.12
685 695 2.806244 CGGAATATTCCCCATGAACGAC 59.194 50.000 25.60 0.16 44.67 4.34
686 696 2.436542 ACGGAATATTCCCCATGAACGA 59.563 45.455 25.60 0.00 44.67 3.85
687 697 2.846193 ACGGAATATTCCCCATGAACG 58.154 47.619 25.60 14.85 44.67 3.95
688 698 7.120726 CCTTATAACGGAATATTCCCCATGAAC 59.879 40.741 25.60 1.98 44.67 3.18
689 699 7.172342 CCTTATAACGGAATATTCCCCATGAA 58.828 38.462 25.60 14.64 44.67 2.57
690 700 6.296778 CCCTTATAACGGAATATTCCCCATGA 60.297 42.308 25.60 13.14 44.67 3.07
691 701 5.885912 CCCTTATAACGGAATATTCCCCATG 59.114 44.000 25.60 15.38 44.67 3.66
692 702 5.554350 ACCCTTATAACGGAATATTCCCCAT 59.446 40.000 25.60 18.15 44.67 4.00
693 703 4.915194 ACCCTTATAACGGAATATTCCCCA 59.085 41.667 25.60 13.04 44.67 4.96
694 704 5.509832 ACCCTTATAACGGAATATTCCCC 57.490 43.478 25.60 6.05 44.67 4.81
695 705 5.708697 CCAACCCTTATAACGGAATATTCCC 59.291 44.000 25.60 10.60 44.67 3.97
696 706 5.708697 CCCAACCCTTATAACGGAATATTCC 59.291 44.000 22.63 22.63 44.05 3.01
697 707 6.301486 ACCCAACCCTTATAACGGAATATTC 58.699 40.000 6.93 6.93 0.00 1.75
698 708 6.270219 ACCCAACCCTTATAACGGAATATT 57.730 37.500 7.42 0.00 0.00 1.28
699 709 5.917545 ACCCAACCCTTATAACGGAATAT 57.082 39.130 7.42 0.00 0.00 1.28
700 710 5.713760 AACCCAACCCTTATAACGGAATA 57.286 39.130 7.42 0.00 0.00 1.75
701 711 4.596354 AACCCAACCCTTATAACGGAAT 57.404 40.909 7.42 0.00 0.00 3.01
702 712 4.080687 CAAACCCAACCCTTATAACGGAA 58.919 43.478 7.42 0.00 0.00 4.30
703 713 3.330110 TCAAACCCAACCCTTATAACGGA 59.670 43.478 7.42 0.00 0.00 4.69
704 714 3.688235 TCAAACCCAACCCTTATAACGG 58.312 45.455 0.00 0.00 0.00 4.44
705 715 3.692593 CCTCAAACCCAACCCTTATAACG 59.307 47.826 0.00 0.00 0.00 3.18
706 716 4.021229 CCCTCAAACCCAACCCTTATAAC 58.979 47.826 0.00 0.00 0.00 1.89
707 717 3.663632 ACCCTCAAACCCAACCCTTATAA 59.336 43.478 0.00 0.00 0.00 0.98
708 718 3.270812 ACCCTCAAACCCAACCCTTATA 58.729 45.455 0.00 0.00 0.00 0.98
709 719 2.078611 ACCCTCAAACCCAACCCTTAT 58.921 47.619 0.00 0.00 0.00 1.73
710 720 1.536644 ACCCTCAAACCCAACCCTTA 58.463 50.000 0.00 0.00 0.00 2.69
711 721 0.639943 AACCCTCAAACCCAACCCTT 59.360 50.000 0.00 0.00 0.00 3.95
712 722 0.187606 GAACCCTCAAACCCAACCCT 59.812 55.000 0.00 0.00 0.00 4.34
713 723 0.187606 AGAACCCTCAAACCCAACCC 59.812 55.000 0.00 0.00 0.00 4.11
714 724 2.963599 TAGAACCCTCAAACCCAACC 57.036 50.000 0.00 0.00 0.00 3.77
715 725 4.663334 AGATTAGAACCCTCAAACCCAAC 58.337 43.478 0.00 0.00 0.00 3.77
716 726 5.333566 AAGATTAGAACCCTCAAACCCAA 57.666 39.130 0.00 0.00 0.00 4.12
717 727 5.076873 CAAAGATTAGAACCCTCAAACCCA 58.923 41.667 0.00 0.00 0.00 4.51
718 728 4.082190 GCAAAGATTAGAACCCTCAAACCC 60.082 45.833 0.00 0.00 0.00 4.11
719 729 4.082190 GGCAAAGATTAGAACCCTCAAACC 60.082 45.833 0.00 0.00 0.00 3.27
720 730 4.082190 GGGCAAAGATTAGAACCCTCAAAC 60.082 45.833 0.00 0.00 34.34 2.93
721 731 4.086457 GGGCAAAGATTAGAACCCTCAAA 58.914 43.478 0.00 0.00 34.34 2.69
722 732 3.563479 GGGGCAAAGATTAGAACCCTCAA 60.563 47.826 0.00 0.00 37.50 3.02
723 733 2.025321 GGGGCAAAGATTAGAACCCTCA 60.025 50.000 0.00 0.00 37.50 3.86
724 734 2.242452 AGGGGCAAAGATTAGAACCCTC 59.758 50.000 0.00 0.00 43.26 4.30
725 735 2.288525 AGGGGCAAAGATTAGAACCCT 58.711 47.619 0.00 0.00 42.01 4.34
726 736 2.291605 ACAGGGGCAAAGATTAGAACCC 60.292 50.000 0.00 0.00 36.93 4.11
727 737 3.087370 ACAGGGGCAAAGATTAGAACC 57.913 47.619 0.00 0.00 0.00 3.62
728 738 5.468540 AAAACAGGGGCAAAGATTAGAAC 57.531 39.130 0.00 0.00 0.00 3.01
729 739 5.600484 TGAAAAACAGGGGCAAAGATTAGAA 59.400 36.000 0.00 0.00 0.00 2.10
730 740 5.144100 TGAAAAACAGGGGCAAAGATTAGA 58.856 37.500 0.00 0.00 0.00 2.10
731 741 5.467035 TGAAAAACAGGGGCAAAGATTAG 57.533 39.130 0.00 0.00 0.00 1.73
732 742 5.878406 TTGAAAAACAGGGGCAAAGATTA 57.122 34.783 0.00 0.00 0.00 1.75
733 743 4.769345 TTGAAAAACAGGGGCAAAGATT 57.231 36.364 0.00 0.00 0.00 2.40
734 744 4.263025 GGATTGAAAAACAGGGGCAAAGAT 60.263 41.667 0.00 0.00 0.00 2.40
735 745 3.070878 GGATTGAAAAACAGGGGCAAAGA 59.929 43.478 0.00 0.00 0.00 2.52
736 746 3.402110 GGATTGAAAAACAGGGGCAAAG 58.598 45.455 0.00 0.00 0.00 2.77
737 747 2.224161 CGGATTGAAAAACAGGGGCAAA 60.224 45.455 0.00 0.00 0.00 3.68
738 748 1.342819 CGGATTGAAAAACAGGGGCAA 59.657 47.619 0.00 0.00 0.00 4.52
739 749 0.965439 CGGATTGAAAAACAGGGGCA 59.035 50.000 0.00 0.00 0.00 5.36
740 750 0.966179 ACGGATTGAAAAACAGGGGC 59.034 50.000 0.00 0.00 0.00 5.80
741 751 4.857509 TTTACGGATTGAAAAACAGGGG 57.142 40.909 0.00 0.00 0.00 4.79
742 752 5.689961 CACTTTTACGGATTGAAAAACAGGG 59.310 40.000 0.00 0.00 0.00 4.45
743 753 5.174943 GCACTTTTACGGATTGAAAAACAGG 59.825 40.000 0.00 0.00 0.00 4.00
744 754 5.746245 TGCACTTTTACGGATTGAAAAACAG 59.254 36.000 0.00 0.00 0.00 3.16
745 755 5.517054 GTGCACTTTTACGGATTGAAAAACA 59.483 36.000 10.32 0.00 0.00 2.83
746 756 5.517054 TGTGCACTTTTACGGATTGAAAAAC 59.483 36.000 19.41 0.00 0.00 2.43
747 757 5.651530 TGTGCACTTTTACGGATTGAAAAA 58.348 33.333 19.41 0.00 0.00 1.94
748 758 5.250235 TGTGCACTTTTACGGATTGAAAA 57.750 34.783 19.41 0.00 0.00 2.29
749 759 4.902443 TGTGCACTTTTACGGATTGAAA 57.098 36.364 19.41 0.00 0.00 2.69
750 760 4.902443 TTGTGCACTTTTACGGATTGAA 57.098 36.364 19.41 0.00 0.00 2.69
751 761 4.902443 TTTGTGCACTTTTACGGATTGA 57.098 36.364 19.41 0.00 0.00 2.57
752 762 5.746245 TCTTTTTGTGCACTTTTACGGATTG 59.254 36.000 19.41 0.00 0.00 2.67
753 763 5.897050 TCTTTTTGTGCACTTTTACGGATT 58.103 33.333 19.41 0.00 0.00 3.01
754 764 5.508200 TCTTTTTGTGCACTTTTACGGAT 57.492 34.783 19.41 0.00 0.00 4.18
755 765 4.966965 TCTTTTTGTGCACTTTTACGGA 57.033 36.364 19.41 5.06 0.00 4.69
756 766 5.277825 TGATCTTTTTGTGCACTTTTACGG 58.722 37.500 19.41 2.74 0.00 4.02
757 767 6.991485 ATGATCTTTTTGTGCACTTTTACG 57.009 33.333 19.41 2.49 0.00 3.18
758 768 9.986833 AAAAATGATCTTTTTGTGCACTTTTAC 57.013 25.926 19.41 3.03 31.17 2.01
761 771 9.986833 GTTAAAAATGATCTTTTTGTGCACTTT 57.013 25.926 19.41 7.66 34.01 2.66
762 772 8.611757 GGTTAAAAATGATCTTTTTGTGCACTT 58.388 29.630 19.41 0.85 34.01 3.16
763 773 7.226523 GGGTTAAAAATGATCTTTTTGTGCACT 59.773 33.333 19.41 6.05 34.01 4.40
764 774 7.226523 AGGGTTAAAAATGATCTTTTTGTGCAC 59.773 33.333 17.27 10.75 34.01 4.57
765 775 7.278875 AGGGTTAAAAATGATCTTTTTGTGCA 58.721 30.769 17.27 4.19 34.01 4.57
766 776 7.728847 AGGGTTAAAAATGATCTTTTTGTGC 57.271 32.000 17.27 11.06 34.01 4.57
788 798 6.458210 TCGAACCCTTACTAGTGTTTTAAGG 58.542 40.000 12.66 12.66 41.09 2.69
789 799 7.373493 TCTCGAACCCTTACTAGTGTTTTAAG 58.627 38.462 5.39 0.19 0.00 1.85
790 800 7.014615 ACTCTCGAACCCTTACTAGTGTTTTAA 59.985 37.037 5.39 0.00 0.00 1.52
791 801 6.491403 ACTCTCGAACCCTTACTAGTGTTTTA 59.509 38.462 5.39 0.00 0.00 1.52
792 802 5.303845 ACTCTCGAACCCTTACTAGTGTTTT 59.696 40.000 5.39 0.00 0.00 2.43
793 803 4.831710 ACTCTCGAACCCTTACTAGTGTTT 59.168 41.667 5.39 0.00 0.00 2.83
794 804 4.405548 ACTCTCGAACCCTTACTAGTGTT 58.594 43.478 5.39 0.26 0.00 3.32
795 805 4.031636 ACTCTCGAACCCTTACTAGTGT 57.968 45.455 5.39 0.00 0.00 3.55
796 806 5.048224 TCAAACTCTCGAACCCTTACTAGTG 60.048 44.000 5.39 0.00 0.00 2.74
797 807 5.075493 TCAAACTCTCGAACCCTTACTAGT 58.925 41.667 0.00 0.00 0.00 2.57
798 808 5.415077 TCTCAAACTCTCGAACCCTTACTAG 59.585 44.000 0.00 0.00 0.00 2.57
799 809 5.319453 TCTCAAACTCTCGAACCCTTACTA 58.681 41.667 0.00 0.00 0.00 1.82
800 810 4.150359 TCTCAAACTCTCGAACCCTTACT 58.850 43.478 0.00 0.00 0.00 2.24
801 811 4.022155 ACTCTCAAACTCTCGAACCCTTAC 60.022 45.833 0.00 0.00 0.00 2.34
802 812 4.150359 ACTCTCAAACTCTCGAACCCTTA 58.850 43.478 0.00 0.00 0.00 2.69
803 813 2.966516 ACTCTCAAACTCTCGAACCCTT 59.033 45.455 0.00 0.00 0.00 3.95
804 814 2.599677 ACTCTCAAACTCTCGAACCCT 58.400 47.619 0.00 0.00 0.00 4.34
805 815 3.006003 AGAACTCTCAAACTCTCGAACCC 59.994 47.826 0.00 0.00 0.00 4.11
806 816 4.245845 AGAACTCTCAAACTCTCGAACC 57.754 45.455 0.00 0.00 0.00 3.62
807 817 6.004408 AGTAGAACTCTCAAACTCTCGAAC 57.996 41.667 0.00 0.00 0.00 3.95
808 818 6.935771 ACTAGTAGAACTCTCAAACTCTCGAA 59.064 38.462 3.59 0.00 0.00 3.71
809 819 6.465948 ACTAGTAGAACTCTCAAACTCTCGA 58.534 40.000 3.59 0.00 0.00 4.04
810 820 6.730960 ACTAGTAGAACTCTCAAACTCTCG 57.269 41.667 3.59 0.00 0.00 4.04
811 821 9.997482 CATTACTAGTAGAACTCTCAAACTCTC 57.003 37.037 3.59 0.00 0.00 3.20
812 822 8.463607 GCATTACTAGTAGAACTCTCAAACTCT 58.536 37.037 3.59 0.00 0.00 3.24
813 823 8.463607 AGCATTACTAGTAGAACTCTCAAACTC 58.536 37.037 3.59 0.00 0.00 3.01
814 824 8.356000 AGCATTACTAGTAGAACTCTCAAACT 57.644 34.615 3.59 0.00 0.00 2.66
815 825 8.463607 AGAGCATTACTAGTAGAACTCTCAAAC 58.536 37.037 18.01 1.87 0.00 2.93
816 826 8.582657 AGAGCATTACTAGTAGAACTCTCAAA 57.417 34.615 18.01 0.00 0.00 2.69
817 827 8.582657 AAGAGCATTACTAGTAGAACTCTCAA 57.417 34.615 21.40 2.34 32.30 3.02
818 828 9.111613 GTAAGAGCATTACTAGTAGAACTCTCA 57.888 37.037 21.40 11.50 32.30 3.27
819 829 9.111613 TGTAAGAGCATTACTAGTAGAACTCTC 57.888 37.037 21.40 15.56 32.30 3.20
820 830 9.463902 TTGTAAGAGCATTACTAGTAGAACTCT 57.536 33.333 18.01 18.01 34.85 3.24
864 874 1.939974 TGGCGATGTGCTCTTGTATC 58.060 50.000 0.00 0.00 45.43 2.24
921 931 5.280521 CCTGGCCTCCTTCTTTTCTTAACTA 60.281 44.000 3.32 0.00 0.00 2.24
940 951 2.174363 AAAATGCTTTGCTTCCTGGC 57.826 45.000 0.00 0.00 0.00 4.85
977 989 1.213296 GATGAAGCAGGGGAGGGTAA 58.787 55.000 0.00 0.00 0.00 2.85
1017 1029 4.523083 GCTCCATGGTTTTATACTGGTGA 58.477 43.478 12.58 0.00 0.00 4.02
1138 1158 2.066340 CTGCTGGGTGGTGGTTCTA 58.934 57.895 0.00 0.00 0.00 2.10
1362 1415 4.516195 GCTTCCTCTCCGTCGGCC 62.516 72.222 6.34 0.00 0.00 6.13
1482 1538 3.790416 GAAGGTGCCCAGCCACACA 62.790 63.158 0.00 0.00 38.57 3.72
1527 1583 0.460284 CGAAGGCAGCTTGGTCGTAT 60.460 55.000 0.00 0.00 0.00 3.06
1856 1929 7.164122 AGTGCTGACTTGAGAAAATCAGATAA 58.836 34.615 4.33 0.00 40.92 1.75
1936 2009 0.615850 AGCTAGAACAAGACTGGCCC 59.384 55.000 0.00 0.00 41.57 5.80
1939 2012 7.575414 TTCTATCTAGCTAGAACAAGACTGG 57.425 40.000 26.62 10.89 33.78 4.00
1975 2058 1.271926 CGGTTTCCTCAATCCCAAGGT 60.272 52.381 0.00 0.00 34.12 3.50
2005 2212 3.750373 AAACCAGCACAGCCGTCGT 62.750 57.895 0.00 0.00 0.00 4.34
2018 2225 1.480137 CAGCACTTCCAAACCAAACCA 59.520 47.619 0.00 0.00 0.00 3.67
2048 2255 9.347240 CTCATATTGACCTGACCTAATTCAAAT 57.653 33.333 0.00 0.00 30.34 2.32
2114 2338 0.615850 GAGAGTTTGCCCTAGCCACT 59.384 55.000 0.00 0.00 38.69 4.00
2154 2378 1.153353 GGAAAGCGAATTCACGGACA 58.847 50.000 6.22 0.00 0.00 4.02
2155 2379 1.393883 GAGGAAAGCGAATTCACGGAC 59.606 52.381 6.22 0.00 0.00 4.79
2159 2383 1.740025 CAGGGAGGAAAGCGAATTCAC 59.260 52.381 6.22 0.00 0.00 3.18
2176 2400 4.154347 GTCAGAGAGGCGGGCAGG 62.154 72.222 3.78 0.00 0.00 4.85
2177 2401 4.504916 CGTCAGAGAGGCGGGCAG 62.505 72.222 3.78 0.00 42.87 4.85
2186 2451 3.838271 GCCATCGGCCGTCAGAGA 61.838 66.667 27.15 4.32 44.06 3.10
2198 2463 0.250510 GAATTCCCCTCCTCGCCATC 60.251 60.000 0.00 0.00 0.00 3.51
2199 2464 1.709994 GGAATTCCCCTCCTCGCCAT 61.710 60.000 14.03 0.00 0.00 4.40
2205 2470 2.680370 GCACCGGAATTCCCCTCCT 61.680 63.158 19.01 0.00 0.00 3.69
2300 3221 3.385384 CAGAGCAGAGGCACCGGA 61.385 66.667 9.46 0.00 44.61 5.14
2325 3331 2.897350 GATTCCCCTTCGCGCCAG 60.897 66.667 0.00 0.00 0.00 4.85
2331 3337 1.153086 CCTGCAGGATTCCCCTTCG 60.153 63.158 29.88 0.00 44.85 3.79
2333 3339 1.693640 CACCTGCAGGATTCCCCTT 59.306 57.895 39.19 11.44 44.85 3.95
2341 3347 4.082523 GCGTAGGCACCTGCAGGA 62.083 66.667 39.19 13.98 44.36 3.86
2342 3348 4.087892 AGCGTAGGCACCTGCAGG 62.088 66.667 31.60 31.60 44.36 4.85
2343 3349 2.510238 GAGCGTAGGCACCTGCAG 60.510 66.667 6.78 6.78 44.36 4.41
2347 3353 0.613853 TAACCAGAGCGTAGGCACCT 60.614 55.000 10.48 3.44 43.41 4.00
2355 3361 5.972107 TTCTAAACTACTAACCAGAGCGT 57.028 39.130 0.00 0.00 0.00 5.07
2453 3459 0.246635 CGAACTCAACGAGGATGGGT 59.753 55.000 0.00 0.00 33.35 4.51
2463 3469 2.395654 GTCCAGACAGACGAACTCAAC 58.604 52.381 0.00 0.00 0.00 3.18
2492 3498 1.602311 GAATCTACGTCGGAGCCCTA 58.398 55.000 0.00 0.00 0.00 3.53
2502 3508 5.415077 CCAAGGATACGATAGGAATCTACGT 59.585 44.000 0.00 0.00 46.39 3.57
2528 3534 2.814336 CAAGAAACCCTAACCTCACTGC 59.186 50.000 0.00 0.00 0.00 4.40
2530 3536 3.714798 TGACAAGAAACCCTAACCTCACT 59.285 43.478 0.00 0.00 0.00 3.41
2548 3554 3.244318 ACACAGAATCTCAGCACATGACA 60.244 43.478 0.00 0.00 33.22 3.58
2557 3563 2.094803 AGCGTCTGACACAGAATCTCAG 60.095 50.000 8.73 0.00 42.46 3.35
2558 3564 1.889170 AGCGTCTGACACAGAATCTCA 59.111 47.619 8.73 0.00 42.46 3.27
2565 3571 3.248363 TGAATTTGAAGCGTCTGACACAG 59.752 43.478 8.73 0.00 0.00 3.66
2569 3575 3.218398 CGTTGAATTTGAAGCGTCTGAC 58.782 45.455 0.31 0.00 0.00 3.51
2575 3581 2.993545 TGAACCGTTGAATTTGAAGCG 58.006 42.857 0.00 0.00 0.00 4.68
2577 3583 4.150451 GGCATTGAACCGTTGAATTTGAAG 59.850 41.667 0.00 0.00 0.00 3.02
2582 3588 2.346099 CGGCATTGAACCGTTGAATT 57.654 45.000 0.00 0.00 45.70 2.17
2591 3597 0.725784 CGCAGTTGTCGGCATTGAAC 60.726 55.000 6.25 0.00 34.60 3.18
2592 3598 1.573932 CGCAGTTGTCGGCATTGAA 59.426 52.632 6.25 0.00 34.60 2.69
2593 3599 2.324330 CCGCAGTTGTCGGCATTGA 61.324 57.895 6.25 0.00 40.46 2.57
2594 3600 2.176546 CCGCAGTTGTCGGCATTG 59.823 61.111 0.00 0.00 40.46 2.82
2658 3724 3.861276 ACGTGATCTAACCGATGACAA 57.139 42.857 0.00 0.00 36.20 3.18
2667 3733 3.232213 TCAGAGCCAACGTGATCTAAC 57.768 47.619 0.00 0.00 0.00 2.34
2669 3735 4.038042 CCTTATCAGAGCCAACGTGATCTA 59.962 45.833 0.00 0.00 33.05 1.98
2672 3738 2.158900 CCCTTATCAGAGCCAACGTGAT 60.159 50.000 0.00 0.00 35.16 3.06
2676 3742 1.482593 ACTCCCTTATCAGAGCCAACG 59.517 52.381 0.00 0.00 33.18 4.10
2678 3744 1.757118 CGACTCCCTTATCAGAGCCAA 59.243 52.381 0.00 0.00 33.18 4.52
2685 3751 2.894765 TGTTGTCACGACTCCCTTATCA 59.105 45.455 0.00 0.00 0.00 2.15
2686 3752 3.512680 CTGTTGTCACGACTCCCTTATC 58.487 50.000 0.00 0.00 0.00 1.75
2687 3753 2.353803 GCTGTTGTCACGACTCCCTTAT 60.354 50.000 0.00 0.00 0.00 1.73
2696 3762 2.890808 AGAAGAAGCTGTTGTCACGA 57.109 45.000 0.00 0.00 0.00 4.35
2697 3763 3.301906 CGATAGAAGAAGCTGTTGTCACG 59.698 47.826 0.00 0.00 39.76 4.35
2703 3769 3.334583 TTGCCGATAGAAGAAGCTGTT 57.665 42.857 0.00 0.00 39.76 3.16
2706 3784 4.502259 CCACTATTGCCGATAGAAGAAGCT 60.502 45.833 5.96 0.00 40.20 3.74
2710 3788 3.004419 CGACCACTATTGCCGATAGAAGA 59.996 47.826 5.96 0.00 40.20 2.87
2711 3789 3.243434 ACGACCACTATTGCCGATAGAAG 60.243 47.826 5.96 0.00 40.20 2.85
2736 3814 0.693049 ATTGAGGTTTCTGGACCGCT 59.307 50.000 0.00 0.00 44.62 5.52
2737 3815 0.804989 CATTGAGGTTTCTGGACCGC 59.195 55.000 0.00 0.00 44.62 5.68
2774 3852 6.238648 AGTTCACCGGAGTAAAAATCATCTT 58.761 36.000 9.46 0.00 0.00 2.40
2790 3869 9.702726 CATCATAACTGTTATAAAAGTTCACCG 57.297 33.333 21.78 10.77 37.74 4.94
2832 3913 4.439057 GAGCATTAGGTGAACCGTTCATA 58.561 43.478 16.80 4.07 42.47 2.15
2838 3919 0.810031 CCCGAGCATTAGGTGAACCG 60.810 60.000 0.00 0.00 42.08 4.44
2885 3966 0.881118 GAGATTCAAACTTGGCGCCA 59.119 50.000 29.03 29.03 0.00 5.69
2937 4019 4.035017 CCGTCAACCATAAAATTCATCGC 58.965 43.478 0.00 0.00 0.00 4.58
2939 4021 5.036737 CAGCCGTCAACCATAAAATTCATC 58.963 41.667 0.00 0.00 0.00 2.92



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.