Multiple sequence alignment - TraesCS4A01G314500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G314500 chr4A 100.000 3001 0 0 1 3001 604855722 604858722 0.000000e+00 5542.0
1 TraesCS4A01G314500 chr4A 83.654 832 105 17 1007 1818 613544349 613543529 0.000000e+00 754.0
2 TraesCS4A01G314500 chr4A 84.498 787 86 22 1052 1814 604940691 604941465 0.000000e+00 745.0
3 TraesCS4A01G314500 chr4A 91.667 192 14 2 2021 2210 604942534 604942725 6.380000e-67 265.0
4 TraesCS4A01G314500 chr4A 86.916 107 13 1 325 431 457554961 457554856 5.260000e-23 119.0
5 TraesCS4A01G314500 chr4A 89.610 77 4 1 1833 1905 604941520 604941596 8.860000e-16 95.3
6 TraesCS4A01G314500 chr5D 92.813 1781 89 16 71 1820 559980015 559978243 0.000000e+00 2543.0
7 TraesCS4A01G314500 chr5D 83.465 1010 109 15 856 1820 556423146 556424142 0.000000e+00 887.0
8 TraesCS4A01G314500 chr5D 84.156 385 38 15 431 812 556422514 556422878 4.760000e-93 351.0
9 TraesCS4A01G314500 chr5D 88.500 200 13 4 2021 2210 559976923 559976724 1.800000e-57 233.0
10 TraesCS4A01G314500 chr5D 100.000 28 0 0 1878 1905 556424231 556424258 5.000000e-03 52.8
11 TraesCS4A01G314500 chr5B 82.987 1346 100 60 821 2105 710326178 710324901 0.000000e+00 1098.0
12 TraesCS4A01G314500 chr5B 85.011 894 80 30 1372 2229 694203394 694202519 0.000000e+00 859.0
13 TraesCS4A01G314500 chr5B 82.709 908 90 35 1052 1908 710314398 710313507 0.000000e+00 745.0
14 TraesCS4A01G314500 chr5B 82.139 851 113 20 994 1820 694289342 694288507 0.000000e+00 693.0
15 TraesCS4A01G314500 chr5B 93.112 392 20 6 434 819 710326632 710326242 4.340000e-158 568.0
16 TraesCS4A01G314500 chr5B 86.637 449 57 2 1372 1820 694262161 694261716 7.470000e-136 494.0
17 TraesCS4A01G314500 chr5B 79.942 693 80 34 2147 2810 710324907 710324245 3.530000e-124 455.0
18 TraesCS4A01G314500 chr5B 92.268 194 13 2 2019 2210 710312003 710311810 1.060000e-69 274.0
19 TraesCS4A01G314500 chr5B 79.612 412 58 16 435 839 694290158 694289766 3.810000e-69 272.0
20 TraesCS4A01G314500 chr5B 82.051 78 3 7 1831 1908 694288464 694288398 4.180000e-04 56.5
21 TraesCS4A01G314500 chr3B 94.286 70 4 0 1 70 535521901 535521832 1.140000e-19 108.0
22 TraesCS4A01G314500 chr5A 88.136 59 5 2 2298 2354 589032123 589032181 5.370000e-08 69.4
23 TraesCS4A01G314500 chr4D 75.568 176 23 9 2232 2394 464794165 464793997 5.370000e-08 69.4
24 TraesCS4A01G314500 chr7D 86.441 59 6 2 2298 2354 591206624 591206566 2.500000e-06 63.9
25 TraesCS4A01G314500 chr7B 85.484 62 6 3 2296 2354 483022463 483022402 8.980000e-06 62.1
26 TraesCS4A01G314500 chr6B 86.441 59 5 3 2298 2354 39305091 39305034 8.980000e-06 62.1
27 TraesCS4A01G314500 chr6B 81.579 76 8 4 2348 2421 39304574 39304645 1.160000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G314500 chr4A 604855722 604858722 3000 False 5542.000000 5542 100.000000 1 3001 1 chr4A.!!$F1 3000
1 TraesCS4A01G314500 chr4A 613543529 613544349 820 True 754.000000 754 83.654000 1007 1818 1 chr4A.!!$R2 811
2 TraesCS4A01G314500 chr4A 604940691 604942725 2034 False 368.433333 745 88.591667 1052 2210 3 chr4A.!!$F2 1158
3 TraesCS4A01G314500 chr5D 559976724 559980015 3291 True 1388.000000 2543 90.656500 71 2210 2 chr5D.!!$R1 2139
4 TraesCS4A01G314500 chr5D 556422514 556424258 1744 False 430.266667 887 89.207000 431 1905 3 chr5D.!!$F1 1474
5 TraesCS4A01G314500 chr5B 694202519 694203394 875 True 859.000000 859 85.011000 1372 2229 1 chr5B.!!$R1 857
6 TraesCS4A01G314500 chr5B 710324245 710326632 2387 True 707.000000 1098 85.347000 434 2810 3 chr5B.!!$R5 2376
7 TraesCS4A01G314500 chr5B 710311810 710314398 2588 True 509.500000 745 87.488500 1052 2210 2 chr5B.!!$R4 1158
8 TraesCS4A01G314500 chr5B 694288398 694290158 1760 True 340.500000 693 81.267333 435 1908 3 chr5B.!!$R3 1473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 1259 0.179059 TCTGCTCAACGAACTTGGCA 60.179 50.0 0.0 0.0 35.78 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2341 4609 0.035739 TCAGTACCAAAACCGCCTCC 59.964 55.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.211963 GTGCCAATAGCGCCCAGG 61.212 66.667 2.29 1.99 46.76 4.45
31 32 3.697439 GTGCCAATAGCGCCCAGGA 62.697 63.158 2.29 0.00 46.76 3.86
32 33 2.113986 GCCAATAGCGCCCAGGAT 59.886 61.111 2.29 0.00 0.00 3.24
33 34 1.529244 GCCAATAGCGCCCAGGATT 60.529 57.895 2.29 0.00 0.00 3.01
34 35 1.109323 GCCAATAGCGCCCAGGATTT 61.109 55.000 2.29 0.00 0.00 2.17
35 36 0.670162 CCAATAGCGCCCAGGATTTG 59.330 55.000 2.29 0.00 0.00 2.32
37 38 1.109323 AATAGCGCCCAGGATTTGGC 61.109 55.000 2.29 0.00 46.32 4.52
42 43 2.761213 CCCAGGATTTGGCAGGGC 60.761 66.667 0.00 0.00 46.32 5.19
43 44 3.142838 CCAGGATTTGGCAGGGCG 61.143 66.667 0.00 0.00 40.87 6.13
44 45 3.142838 CAGGATTTGGCAGGGCGG 61.143 66.667 0.00 0.00 0.00 6.13
45 46 3.338250 AGGATTTGGCAGGGCGGA 61.338 61.111 0.00 0.00 0.00 5.54
46 47 3.140814 GGATTTGGCAGGGCGGAC 61.141 66.667 0.00 0.00 0.00 4.79
47 48 2.361104 GATTTGGCAGGGCGGACA 60.361 61.111 0.00 0.00 0.00 4.02
48 49 1.754234 GATTTGGCAGGGCGGACAT 60.754 57.895 0.00 0.00 0.00 3.06
49 50 2.008268 GATTTGGCAGGGCGGACATG 62.008 60.000 0.00 0.00 0.00 3.21
50 51 4.738998 TTGGCAGGGCGGACATGG 62.739 66.667 0.00 0.00 0.00 3.66
52 53 4.424711 GGCAGGGCGGACATGGAA 62.425 66.667 0.00 0.00 0.00 3.53
53 54 2.361104 GCAGGGCGGACATGGAAA 60.361 61.111 0.00 0.00 0.00 3.13
54 55 2.700773 GCAGGGCGGACATGGAAAC 61.701 63.158 0.00 0.00 0.00 2.78
55 56 1.002134 CAGGGCGGACATGGAAACT 60.002 57.895 0.00 0.00 0.00 2.66
56 57 0.251916 CAGGGCGGACATGGAAACTA 59.748 55.000 0.00 0.00 0.00 2.24
57 58 0.988832 AGGGCGGACATGGAAACTAA 59.011 50.000 0.00 0.00 0.00 2.24
58 59 1.092348 GGGCGGACATGGAAACTAAC 58.908 55.000 0.00 0.00 0.00 2.34
59 60 1.092348 GGCGGACATGGAAACTAACC 58.908 55.000 0.00 0.00 0.00 2.85
60 61 1.612199 GGCGGACATGGAAACTAACCA 60.612 52.381 0.00 0.00 41.83 3.67
61 62 2.156098 GCGGACATGGAAACTAACCAA 58.844 47.619 0.00 0.00 40.93 3.67
62 63 2.554893 GCGGACATGGAAACTAACCAAA 59.445 45.455 0.00 0.00 40.93 3.28
63 64 3.610821 GCGGACATGGAAACTAACCAAAC 60.611 47.826 0.00 0.00 40.93 2.93
64 65 3.566322 CGGACATGGAAACTAACCAAACA 59.434 43.478 0.00 0.00 40.93 2.83
65 66 4.320202 CGGACATGGAAACTAACCAAACAG 60.320 45.833 0.00 0.00 40.93 3.16
66 67 4.546570 GACATGGAAACTAACCAAACAGC 58.453 43.478 0.00 0.00 40.93 4.40
67 68 3.320826 ACATGGAAACTAACCAAACAGCC 59.679 43.478 0.00 0.00 40.93 4.85
68 69 2.312390 TGGAAACTAACCAAACAGCCC 58.688 47.619 0.00 0.00 34.25 5.19
69 70 1.616865 GGAAACTAACCAAACAGCCCC 59.383 52.381 0.00 0.00 0.00 5.80
87 88 3.626222 GCCCCTGTATCCCACACAAAATA 60.626 47.826 0.00 0.00 32.33 1.40
88 89 4.803452 CCCCTGTATCCCACACAAAATAT 58.197 43.478 0.00 0.00 32.33 1.28
157 158 1.335132 ATCGGTCCATACTGCCCGTT 61.335 55.000 0.00 0.00 41.17 4.44
301 302 3.826157 TGCCTTGAACTTGACCATAAAGG 59.174 43.478 0.00 0.00 45.67 3.11
348 350 7.246674 ACATACATGTTTCTGCCTATTAACG 57.753 36.000 2.30 0.00 37.90 3.18
423 425 2.033141 AGCAAGGCACGCATCACT 59.967 55.556 0.90 0.00 0.00 3.41
426 428 0.730494 GCAAGGCACGCATCACTTTC 60.730 55.000 0.00 0.00 0.00 2.62
446 448 6.011981 ACTTTCTAGTTGGTATGAATTCCCCA 60.012 38.462 2.27 3.82 0.00 4.96
928 1221 1.457643 TCTACCCTCCCCTGCATCG 60.458 63.158 0.00 0.00 0.00 3.84
956 1259 0.179059 TCTGCTCAACGAACTTGGCA 60.179 50.000 0.00 0.00 35.78 4.92
1001 1358 1.406069 CCAACCTCCAAGTCCATCTCG 60.406 57.143 0.00 0.00 0.00 4.04
1257 1644 2.491298 GAGATGCTCCTGCTCGATATGA 59.509 50.000 0.00 0.00 40.48 2.15
1266 1653 2.824936 CTGCTCGATATGATCTCCCAGT 59.175 50.000 0.00 0.00 0.00 4.00
1274 1661 1.568504 TGATCTCCCAGTACCACCAC 58.431 55.000 0.00 0.00 0.00 4.16
1283 1670 1.192146 AGTACCACCACGTCCAGCAT 61.192 55.000 0.00 0.00 0.00 3.79
1406 1808 4.690719 CCGTGGGGCAAGTACGCA 62.691 66.667 0.00 0.00 36.56 5.24
1807 2217 3.079960 CATGAATTCATGCTGCTGGAC 57.920 47.619 30.11 0.00 45.92 4.02
1950 2555 8.484799 GTTCGGAAGTTCAAATTATTTTGGTTC 58.515 33.333 5.01 9.66 42.10 3.62
1952 2557 6.088883 CGGAAGTTCAAATTATTTTGGTTCGG 59.911 38.462 5.01 10.03 42.10 4.30
1954 2559 7.654116 GGAAGTTCAAATTATTTTGGTTCGGAA 59.346 33.333 5.01 0.00 42.10 4.30
1955 2560 8.587952 AAGTTCAAATTATTTTGGTTCGGAAG 57.412 30.769 9.56 0.00 42.10 3.46
1956 2561 7.722363 AGTTCAAATTATTTTGGTTCGGAAGT 58.278 30.769 9.56 0.00 42.10 3.01
1957 2562 8.201464 AGTTCAAATTATTTTGGTTCGGAAGTT 58.799 29.630 9.56 0.00 42.10 2.66
1958 2563 8.484799 GTTCAAATTATTTTGGTTCGGAAGTTC 58.515 33.333 9.56 0.00 42.10 3.01
1959 2564 7.717568 TCAAATTATTTTGGTTCGGAAGTTCA 58.282 30.769 5.01 0.00 42.10 3.18
1960 2565 8.198109 TCAAATTATTTTGGTTCGGAAGTTCAA 58.802 29.630 5.01 0.00 42.10 2.69
1962 2567 8.950208 AATTATTTTGGTTCGGAAGTTCAAAA 57.050 26.923 19.38 19.38 38.47 2.44
1963 2568 9.554395 AATTATTTTGGTTCGGAAGTTCAAAAT 57.446 25.926 25.24 25.24 42.25 1.82
1964 2569 8.950208 TTATTTTGGTTCGGAAGTTCAAAATT 57.050 26.923 26.12 17.71 41.23 1.82
1965 2570 7.857734 ATTTTGGTTCGGAAGTTCAAAATTT 57.142 28.000 21.02 10.71 39.83 1.82
1966 2571 7.674471 TTTTGGTTCGGAAGTTCAAAATTTT 57.326 28.000 15.99 0.00 33.95 1.82
1967 2572 7.674471 TTTGGTTCGGAAGTTCAAAATTTTT 57.326 28.000 5.01 0.00 0.00 1.94
1999 4188 5.389725 CGTCAAAATGAATGGTTTTGGATGC 60.390 40.000 10.36 0.00 43.36 3.91
2181 4447 2.430465 CATGCAAGTTGGTAGCACTCT 58.570 47.619 4.75 0.00 41.60 3.24
2210 4477 8.998989 CACGTGCAATTATAAACACAAGAATAG 58.001 33.333 0.82 2.74 33.23 1.73
2223 4490 6.974965 ACACAAGAATAGCAAAAGGAGAAAG 58.025 36.000 0.00 0.00 0.00 2.62
2253 4520 7.955918 ACCTACTTTTCGTCCTTCTACTTTTA 58.044 34.615 0.00 0.00 0.00 1.52
2256 4523 5.404667 ACTTTTCGTCCTTCTACTTTTAGCG 59.595 40.000 0.00 0.00 0.00 4.26
2261 4528 5.182001 TCGTCCTTCTACTTTTAGCGTAGTT 59.818 40.000 0.00 0.00 36.57 2.24
2267 4534 9.583765 CCTTCTACTTTTAGCGTAGTTTAGATT 57.416 33.333 0.00 0.00 36.57 2.40
2310 4577 8.706492 TTTATATAATCCGACAACTTCACGTT 57.294 30.769 0.00 0.00 35.88 3.99
2311 4578 6.823678 ATATAATCCGACAACTTCACGTTC 57.176 37.500 0.00 0.00 32.27 3.95
2319 4586 4.971830 CGACAACTTCACGTTCAACTACTA 59.028 41.667 0.00 0.00 32.27 1.82
2323 4590 7.458677 ACAACTTCACGTTCAACTACTAAAAC 58.541 34.615 0.00 0.00 32.27 2.43
2325 4592 5.232838 ACTTCACGTTCAACTACTAAAACCG 59.767 40.000 0.00 0.00 0.00 4.44
2332 4599 4.634199 TCAACTACTAAAACCGGACAAGG 58.366 43.478 9.46 0.00 37.30 3.61
2341 4609 1.449601 CCGGACAAGGTTCATCCCG 60.450 63.158 0.00 0.00 36.75 5.14
2344 4612 0.107654 GGACAAGGTTCATCCCGGAG 60.108 60.000 0.73 0.00 36.75 4.63
2359 4627 1.296056 CGGAGGCGGTTTTGGTACTG 61.296 60.000 0.00 0.00 0.00 2.74
2363 4631 1.154197 GGCGGTTTTGGTACTGACTC 58.846 55.000 0.00 0.00 29.31 3.36
2369 4637 0.682852 TTTGGTACTGACTCACCCCG 59.317 55.000 0.00 0.00 33.61 5.73
2375 4643 0.549469 ACTGACTCACCCCGGTTTTT 59.451 50.000 0.00 0.00 0.00 1.94
2378 4646 1.770061 TGACTCACCCCGGTTTTTACT 59.230 47.619 0.00 0.00 0.00 2.24
2394 4662 6.198966 GGTTTTTACTGTGCTGACTCAATTTG 59.801 38.462 0.00 0.00 0.00 2.32
2395 4663 6.449635 TTTTACTGTGCTGACTCAATTTGT 57.550 33.333 0.00 0.00 0.00 2.83
2400 4668 3.563808 TGTGCTGACTCAATTTGTGTACC 59.436 43.478 4.21 0.00 0.00 3.34
2439 4707 8.050778 TCTGTGATTAAAAAGAATTGGCGTAT 57.949 30.769 0.00 0.00 0.00 3.06
2451 4719 7.734538 AGAATTGGCGTATTATTTTCAAACG 57.265 32.000 0.00 0.00 36.67 3.60
2464 4732 6.669485 ATTTTCAAACGCACGTATCTTTTC 57.331 33.333 0.00 0.00 0.00 2.29
2468 4736 3.806316 AACGCACGTATCTTTTCCAAG 57.194 42.857 0.00 0.00 0.00 3.61
2470 4738 3.135994 ACGCACGTATCTTTTCCAAGTT 58.864 40.909 0.00 0.00 0.00 2.66
2471 4739 3.562557 ACGCACGTATCTTTTCCAAGTTT 59.437 39.130 0.00 0.00 0.00 2.66
2472 4740 3.906008 CGCACGTATCTTTTCCAAGTTTG 59.094 43.478 0.00 0.00 0.00 2.93
2473 4741 3.668656 GCACGTATCTTTTCCAAGTTTGC 59.331 43.478 0.00 0.00 0.00 3.68
2474 4742 4.791411 GCACGTATCTTTTCCAAGTTTGCA 60.791 41.667 0.00 0.00 0.00 4.08
2475 4743 5.460646 CACGTATCTTTTCCAAGTTTGCAT 58.539 37.500 0.00 0.00 0.00 3.96
2476 4744 6.607689 CACGTATCTTTTCCAAGTTTGCATA 58.392 36.000 0.00 0.00 0.00 3.14
2477 4745 7.250569 CACGTATCTTTTCCAAGTTTGCATAT 58.749 34.615 0.00 0.00 0.00 1.78
2478 4746 7.429340 CACGTATCTTTTCCAAGTTTGCATATC 59.571 37.037 0.00 0.00 0.00 1.63
2479 4747 7.336931 ACGTATCTTTTCCAAGTTTGCATATCT 59.663 33.333 0.00 0.00 0.00 1.98
2480 4748 8.184192 CGTATCTTTTCCAAGTTTGCATATCTT 58.816 33.333 0.00 0.00 0.00 2.40
2481 4749 9.860898 GTATCTTTTCCAAGTTTGCATATCTTT 57.139 29.630 0.00 0.00 0.00 2.52
2482 4750 8.992835 ATCTTTTCCAAGTTTGCATATCTTTC 57.007 30.769 0.00 0.00 0.00 2.62
2483 4751 7.950512 TCTTTTCCAAGTTTGCATATCTTTCA 58.049 30.769 0.00 0.00 0.00 2.69
2484 4752 8.420222 TCTTTTCCAAGTTTGCATATCTTTCAA 58.580 29.630 0.00 0.00 0.00 2.69
2485 4753 8.954950 TTTTCCAAGTTTGCATATCTTTCAAA 57.045 26.923 0.00 0.00 0.00 2.69
2486 4754 9.558396 TTTTCCAAGTTTGCATATCTTTCAAAT 57.442 25.926 0.00 0.00 33.08 2.32
2487 4755 9.558396 TTTCCAAGTTTGCATATCTTTCAAATT 57.442 25.926 0.00 0.00 33.08 1.82
2490 4758 7.329226 CCAAGTTTGCATATCTTTCAAATTCGT 59.671 33.333 0.00 0.00 33.08 3.85
2504 4772 6.271396 TCAAATTCGTGCATGTTTTTCAAG 57.729 33.333 5.68 0.00 0.00 3.02
2508 4776 2.043411 CGTGCATGTTTTTCAAGTCCG 58.957 47.619 0.00 0.00 0.00 4.79
2553 4821 6.040209 TGCTATTTTCAAATCCATGCACTT 57.960 33.333 0.00 0.00 0.00 3.16
2600 4872 7.976135 TTCCAAATTCACATATTTTTGTGGG 57.024 32.000 4.89 0.00 45.63 4.61
2610 4882 7.928706 TCACATATTTTTGTGGGAAATTTCGTT 59.071 29.630 11.95 0.00 45.63 3.85
2614 4886 6.905544 TTTTTGTGGGAAATTTCGTTAACC 57.094 33.333 11.95 7.65 0.00 2.85
2617 4889 4.462133 TGTGGGAAATTTCGTTAACCTGA 58.538 39.130 11.95 0.00 0.00 3.86
2619 4891 5.536916 TGTGGGAAATTTCGTTAACCTGAAT 59.463 36.000 11.95 0.00 0.00 2.57
2633 4924 7.463648 CGTTAACCTGAATAAAGTACACCGATG 60.464 40.741 0.00 0.00 0.00 3.84
2636 4927 6.938507 ACCTGAATAAAGTACACCGATGTAA 58.061 36.000 0.00 0.00 42.99 2.41
2736 5028 4.624024 AGATCATGCATTTGAAAAAGCACG 59.376 37.500 7.75 0.65 44.09 5.34
2740 5032 1.486439 CATTTGAAAAAGCACGCGGT 58.514 45.000 12.47 0.00 0.00 5.68
2810 5103 9.659830 AAGTACGCAAACTTGAAAAAGTATTAG 57.340 29.630 0.11 0.00 38.28 1.73
2811 5104 8.287503 AGTACGCAAACTTGAAAAAGTATTAGG 58.712 33.333 0.00 0.00 31.72 2.69
2812 5105 7.266922 ACGCAAACTTGAAAAAGTATTAGGA 57.733 32.000 0.00 0.00 31.72 2.94
2813 5106 7.136772 ACGCAAACTTGAAAAAGTATTAGGAC 58.863 34.615 0.00 0.00 31.72 3.85
2814 5107 7.012989 ACGCAAACTTGAAAAAGTATTAGGACT 59.987 33.333 0.00 0.00 31.72 3.85
2815 5108 7.860872 CGCAAACTTGAAAAAGTATTAGGACTT 59.139 33.333 0.00 0.00 41.50 3.01
2838 5131 3.660501 AAAAAGAAGTGCCCGGATTTC 57.339 42.857 0.73 0.00 0.00 2.17
2839 5132 2.286365 AAAGAAGTGCCCGGATTTCA 57.714 45.000 0.73 0.00 0.00 2.69
2840 5133 2.286365 AAGAAGTGCCCGGATTTCAA 57.714 45.000 0.73 0.00 0.00 2.69
2841 5134 2.286365 AGAAGTGCCCGGATTTCAAA 57.714 45.000 0.73 0.00 0.00 2.69
2842 5135 2.593026 AGAAGTGCCCGGATTTCAAAA 58.407 42.857 0.73 0.00 0.00 2.44
2843 5136 2.962421 AGAAGTGCCCGGATTTCAAAAA 59.038 40.909 0.73 0.00 0.00 1.94
2844 5137 3.578282 AGAAGTGCCCGGATTTCAAAAAT 59.422 39.130 0.73 0.00 0.00 1.82
2845 5138 4.770010 AGAAGTGCCCGGATTTCAAAAATA 59.230 37.500 0.73 0.00 0.00 1.40
2846 5139 5.422012 AGAAGTGCCCGGATTTCAAAAATAT 59.578 36.000 0.73 0.00 0.00 1.28
2847 5140 6.605594 AGAAGTGCCCGGATTTCAAAAATATA 59.394 34.615 0.73 0.00 0.00 0.86
2848 5141 6.976934 AGTGCCCGGATTTCAAAAATATAT 57.023 33.333 0.73 0.00 0.00 0.86
2849 5142 6.748132 AGTGCCCGGATTTCAAAAATATATG 58.252 36.000 0.73 0.00 0.00 1.78
2850 5143 5.925969 GTGCCCGGATTTCAAAAATATATGG 59.074 40.000 0.73 0.00 0.00 2.74
2851 5144 5.835819 TGCCCGGATTTCAAAAATATATGGA 59.164 36.000 0.73 0.00 0.00 3.41
2852 5145 6.496565 TGCCCGGATTTCAAAAATATATGGAT 59.503 34.615 0.73 0.00 0.00 3.41
2853 5146 7.016072 TGCCCGGATTTCAAAAATATATGGATT 59.984 33.333 0.73 0.00 0.00 3.01
2854 5147 7.877612 GCCCGGATTTCAAAAATATATGGATTT 59.122 33.333 0.73 0.00 0.00 2.17
2855 5148 9.206870 CCCGGATTTCAAAAATATATGGATTTG 57.793 33.333 0.73 10.46 34.81 2.32
2856 5149 9.979578 CCGGATTTCAAAAATATATGGATTTGA 57.020 29.630 0.00 13.47 39.33 2.69
2882 5175 8.579682 AAAAAGTTACATGAATTTGAGTCAGC 57.420 30.769 0.00 0.00 0.00 4.26
2883 5176 7.516198 AAAGTTACATGAATTTGAGTCAGCT 57.484 32.000 0.00 0.00 0.00 4.24
2884 5177 7.516198 AAGTTACATGAATTTGAGTCAGCTT 57.484 32.000 0.00 0.00 0.00 3.74
2885 5178 7.138692 AGTTACATGAATTTGAGTCAGCTTC 57.861 36.000 0.00 8.91 0.00 3.86
2886 5179 4.675190 ACATGAATTTGAGTCAGCTTCG 57.325 40.909 0.00 2.97 0.00 3.79
2887 5180 3.438087 ACATGAATTTGAGTCAGCTTCGG 59.562 43.478 0.00 8.43 0.00 4.30
2888 5181 3.126001 TGAATTTGAGTCAGCTTCGGT 57.874 42.857 10.44 0.00 0.00 4.69
2889 5182 4.265904 TGAATTTGAGTCAGCTTCGGTA 57.734 40.909 10.44 0.00 0.00 4.02
2890 5183 4.637276 TGAATTTGAGTCAGCTTCGGTAA 58.363 39.130 10.44 0.00 0.00 2.85
2891 5184 5.060506 TGAATTTGAGTCAGCTTCGGTAAA 58.939 37.500 10.44 0.00 0.00 2.01
2892 5185 5.529430 TGAATTTGAGTCAGCTTCGGTAAAA 59.471 36.000 10.44 0.00 0.00 1.52
2893 5186 6.038825 TGAATTTGAGTCAGCTTCGGTAAAAA 59.961 34.615 10.44 0.00 0.00 1.94
2908 5201 2.620562 AAAAACGTAGTGGGTCGGC 58.379 52.632 0.00 0.00 45.00 5.54
2909 5202 0.179051 AAAAACGTAGTGGGTCGGCA 60.179 50.000 0.00 0.00 45.00 5.69
2910 5203 0.881600 AAAACGTAGTGGGTCGGCAC 60.882 55.000 0.00 0.00 45.00 5.01
2911 5204 2.720358 AAACGTAGTGGGTCGGCACC 62.720 60.000 0.00 0.00 45.00 5.01
2912 5205 3.687102 CGTAGTGGGTCGGCACCA 61.687 66.667 8.11 0.00 45.94 4.17
2913 5206 2.745037 GTAGTGGGTCGGCACCAA 59.255 61.111 0.00 0.00 45.94 3.67
2914 5207 1.071814 GTAGTGGGTCGGCACCAAA 59.928 57.895 0.00 0.00 45.94 3.28
2915 5208 0.535553 GTAGTGGGTCGGCACCAAAA 60.536 55.000 0.00 0.00 45.94 2.44
2916 5209 0.535553 TAGTGGGTCGGCACCAAAAC 60.536 55.000 0.00 4.04 45.94 2.43
2917 5210 1.826487 GTGGGTCGGCACCAAAACT 60.826 57.895 0.00 0.00 45.94 2.66
2918 5211 1.826054 TGGGTCGGCACCAAAACTG 60.826 57.895 8.11 0.00 45.94 3.16
2919 5212 2.561037 GGGTCGGCACCAAAACTGG 61.561 63.158 8.11 0.00 45.94 4.00
2920 5213 1.826487 GGTCGGCACCAAAACTGGT 60.826 57.895 0.00 0.00 43.17 4.00
2930 5223 4.200838 ACCAAAACTGGTGAAAACCAAG 57.799 40.909 0.00 0.00 41.33 3.61
2931 5224 3.835395 ACCAAAACTGGTGAAAACCAAGA 59.165 39.130 0.00 0.00 41.33 3.02
2932 5225 4.469586 ACCAAAACTGGTGAAAACCAAGAT 59.530 37.500 0.00 0.00 41.33 2.40
2933 5226 5.049828 CCAAAACTGGTGAAAACCAAGATC 58.950 41.667 0.00 0.00 39.61 2.75
2934 5227 5.395103 CCAAAACTGGTGAAAACCAAGATCA 60.395 40.000 0.00 0.00 39.61 2.92
2935 5228 5.520376 AAACTGGTGAAAACCAAGATCAG 57.480 39.130 0.00 0.00 39.61 2.90
2936 5229 3.490348 ACTGGTGAAAACCAAGATCAGG 58.510 45.455 0.00 0.00 39.61 3.86
2937 5230 2.821969 CTGGTGAAAACCAAGATCAGGG 59.178 50.000 8.82 5.29 39.61 4.45
2938 5231 2.445145 TGGTGAAAACCAAGATCAGGGA 59.555 45.455 9.43 0.00 36.74 4.20
2939 5232 2.820197 GGTGAAAACCAAGATCAGGGAC 59.180 50.000 9.43 0.00 0.00 4.46
2940 5233 2.484264 GTGAAAACCAAGATCAGGGACG 59.516 50.000 9.43 0.00 0.00 4.79
2941 5234 2.370519 TGAAAACCAAGATCAGGGACGA 59.629 45.455 9.43 0.00 0.00 4.20
2942 5235 3.181449 TGAAAACCAAGATCAGGGACGAA 60.181 43.478 9.43 0.00 0.00 3.85
2943 5236 3.721087 AAACCAAGATCAGGGACGAAT 57.279 42.857 9.43 0.00 0.00 3.34
2944 5237 2.990066 ACCAAGATCAGGGACGAATC 57.010 50.000 9.43 0.00 0.00 2.52
2945 5238 2.472029 ACCAAGATCAGGGACGAATCT 58.528 47.619 9.43 0.00 36.35 2.40
2946 5239 2.840651 ACCAAGATCAGGGACGAATCTT 59.159 45.455 9.43 0.00 42.28 2.40
2948 5241 3.866651 CAAGATCAGGGACGAATCTTGT 58.133 45.455 13.54 0.00 46.78 3.16
2949 5242 3.810310 AGATCAGGGACGAATCTTGTC 57.190 47.619 0.00 0.00 32.12 3.18
2954 5247 3.527434 GGACGAATCTTGTCCGGTT 57.473 52.632 0.00 0.00 45.82 4.44
2955 5248 1.804601 GGACGAATCTTGTCCGGTTT 58.195 50.000 0.00 0.00 45.82 3.27
2956 5249 1.730612 GGACGAATCTTGTCCGGTTTC 59.269 52.381 0.00 0.00 45.82 2.78
2957 5250 2.409975 GACGAATCTTGTCCGGTTTCA 58.590 47.619 0.00 0.00 0.00 2.69
2958 5251 2.140717 ACGAATCTTGTCCGGTTTCAC 58.859 47.619 0.00 0.00 0.00 3.18
2959 5252 2.224209 ACGAATCTTGTCCGGTTTCACT 60.224 45.455 0.00 0.00 0.00 3.41
2960 5253 2.157668 CGAATCTTGTCCGGTTTCACTG 59.842 50.000 0.00 0.00 0.00 3.66
2961 5254 2.185004 ATCTTGTCCGGTTTCACTGG 57.815 50.000 0.00 0.00 46.14 4.00
2962 5255 0.834612 TCTTGTCCGGTTTCACTGGT 59.165 50.000 0.00 0.00 45.01 4.00
2963 5256 1.210967 TCTTGTCCGGTTTCACTGGTT 59.789 47.619 0.00 0.00 45.01 3.67
2964 5257 2.021457 CTTGTCCGGTTTCACTGGTTT 58.979 47.619 0.00 0.00 45.01 3.27
2965 5258 1.384525 TGTCCGGTTTCACTGGTTTG 58.615 50.000 0.00 0.00 45.01 2.93
2966 5259 0.666374 GTCCGGTTTCACTGGTTTGG 59.334 55.000 0.00 0.00 45.01 3.28
2967 5260 0.547075 TCCGGTTTCACTGGTTTGGA 59.453 50.000 0.00 0.00 45.01 3.53
2968 5261 0.951558 CCGGTTTCACTGGTTTGGAG 59.048 55.000 0.00 0.00 39.82 3.86
2969 5262 1.675552 CGGTTTCACTGGTTTGGAGT 58.324 50.000 0.00 0.00 0.00 3.85
2970 5263 1.333619 CGGTTTCACTGGTTTGGAGTG 59.666 52.381 0.00 0.00 41.96 3.51
2971 5264 1.067060 GGTTTCACTGGTTTGGAGTGC 59.933 52.381 0.00 0.00 40.64 4.40
2972 5265 1.748493 GTTTCACTGGTTTGGAGTGCA 59.252 47.619 0.00 0.00 40.64 4.57
2973 5266 2.136298 TTCACTGGTTTGGAGTGCAA 57.864 45.000 0.00 0.00 40.64 4.08
2974 5267 1.679139 TCACTGGTTTGGAGTGCAAG 58.321 50.000 0.00 0.00 40.64 4.01
2975 5268 1.064758 TCACTGGTTTGGAGTGCAAGT 60.065 47.619 0.00 0.00 40.64 3.16
2976 5269 1.750778 CACTGGTTTGGAGTGCAAGTT 59.249 47.619 0.00 0.00 34.77 2.66
2977 5270 1.750778 ACTGGTTTGGAGTGCAAGTTG 59.249 47.619 0.00 0.00 0.00 3.16
2978 5271 1.750778 CTGGTTTGGAGTGCAAGTTGT 59.249 47.619 4.48 0.00 0.00 3.32
2979 5272 1.748493 TGGTTTGGAGTGCAAGTTGTC 59.252 47.619 4.48 0.00 0.00 3.18
2980 5273 2.024414 GGTTTGGAGTGCAAGTTGTCT 58.976 47.619 4.48 3.71 0.00 3.41
2981 5274 2.223572 GGTTTGGAGTGCAAGTTGTCTG 60.224 50.000 4.48 0.00 0.00 3.51
2982 5275 1.679139 TTGGAGTGCAAGTTGTCTGG 58.321 50.000 4.48 0.00 0.00 3.86
2983 5276 0.546122 TGGAGTGCAAGTTGTCTGGT 59.454 50.000 4.48 0.00 0.00 4.00
2984 5277 1.064758 TGGAGTGCAAGTTGTCTGGTT 60.065 47.619 4.48 0.00 0.00 3.67
2985 5278 2.024414 GGAGTGCAAGTTGTCTGGTTT 58.976 47.619 4.48 0.00 0.00 3.27
2986 5279 2.427095 GGAGTGCAAGTTGTCTGGTTTT 59.573 45.455 4.48 0.00 0.00 2.43
2987 5280 3.630312 GGAGTGCAAGTTGTCTGGTTTTA 59.370 43.478 4.48 0.00 0.00 1.52
2988 5281 4.097286 GGAGTGCAAGTTGTCTGGTTTTAA 59.903 41.667 4.48 0.00 0.00 1.52
2989 5282 5.393678 GGAGTGCAAGTTGTCTGGTTTTAAA 60.394 40.000 4.48 0.00 0.00 1.52
2990 5283 5.650543 AGTGCAAGTTGTCTGGTTTTAAAG 58.349 37.500 4.48 0.00 0.00 1.85
2991 5284 5.185056 AGTGCAAGTTGTCTGGTTTTAAAGT 59.815 36.000 4.48 0.00 0.00 2.66
2992 5285 5.515270 GTGCAAGTTGTCTGGTTTTAAAGTC 59.485 40.000 4.48 0.00 0.00 3.01
2993 5286 4.733405 GCAAGTTGTCTGGTTTTAAAGTCG 59.267 41.667 4.48 0.00 0.00 4.18
2994 5287 5.448089 GCAAGTTGTCTGGTTTTAAAGTCGA 60.448 40.000 4.48 0.00 0.00 4.20
2995 5288 5.986004 AGTTGTCTGGTTTTAAAGTCGAG 57.014 39.130 0.00 0.00 0.00 4.04
2996 5289 4.814771 AGTTGTCTGGTTTTAAAGTCGAGG 59.185 41.667 0.00 0.00 0.00 4.63
2997 5290 3.735591 TGTCTGGTTTTAAAGTCGAGGG 58.264 45.455 0.00 0.00 0.00 4.30
2998 5291 3.072211 GTCTGGTTTTAAAGTCGAGGGG 58.928 50.000 0.00 0.00 0.00 4.79
2999 5292 1.810755 CTGGTTTTAAAGTCGAGGGGC 59.189 52.381 0.00 0.00 0.00 5.80
3000 5293 1.422402 TGGTTTTAAAGTCGAGGGGCT 59.578 47.619 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.576356 CTGGGCGCTATTGGCACG 61.576 66.667 7.64 0.00 41.91 5.34
13 14 2.965716 ATCCTGGGCGCTATTGGCAC 62.966 60.000 7.64 0.00 41.91 5.01
14 15 2.283143 AATCCTGGGCGCTATTGGCA 62.283 55.000 7.64 0.00 41.91 4.92
15 16 1.109323 AAATCCTGGGCGCTATTGGC 61.109 55.000 7.64 0.00 37.64 4.52
16 17 0.670162 CAAATCCTGGGCGCTATTGG 59.330 55.000 7.64 5.10 0.00 3.16
17 18 0.670162 CCAAATCCTGGGCGCTATTG 59.330 55.000 7.64 2.62 42.17 1.90
18 19 1.109323 GCCAAATCCTGGGCGCTATT 61.109 55.000 7.64 0.00 46.54 1.73
19 20 1.529244 GCCAAATCCTGGGCGCTAT 60.529 57.895 7.64 0.00 46.54 2.97
20 21 2.124320 GCCAAATCCTGGGCGCTA 60.124 61.111 7.64 0.00 46.54 4.26
25 26 2.761213 GCCCTGCCAAATCCTGGG 60.761 66.667 0.00 0.00 46.54 4.45
27 28 3.142838 CCGCCCTGCCAAATCCTG 61.143 66.667 0.00 0.00 0.00 3.86
28 29 3.338250 TCCGCCCTGCCAAATCCT 61.338 61.111 0.00 0.00 0.00 3.24
29 30 3.140814 GTCCGCCCTGCCAAATCC 61.141 66.667 0.00 0.00 0.00 3.01
30 31 1.754234 ATGTCCGCCCTGCCAAATC 60.754 57.895 0.00 0.00 0.00 2.17
31 32 2.053865 CATGTCCGCCCTGCCAAAT 61.054 57.895 0.00 0.00 0.00 2.32
32 33 2.676121 CATGTCCGCCCTGCCAAA 60.676 61.111 0.00 0.00 0.00 3.28
33 34 4.738998 CCATGTCCGCCCTGCCAA 62.739 66.667 0.00 0.00 0.00 4.52
35 36 3.936772 TTTCCATGTCCGCCCTGCC 62.937 63.158 0.00 0.00 0.00 4.85
36 37 2.361104 TTTCCATGTCCGCCCTGC 60.361 61.111 0.00 0.00 0.00 4.85
37 38 0.251916 TAGTTTCCATGTCCGCCCTG 59.748 55.000 0.00 0.00 0.00 4.45
38 39 0.988832 TTAGTTTCCATGTCCGCCCT 59.011 50.000 0.00 0.00 0.00 5.19
39 40 1.092348 GTTAGTTTCCATGTCCGCCC 58.908 55.000 0.00 0.00 0.00 6.13
40 41 1.092348 GGTTAGTTTCCATGTCCGCC 58.908 55.000 0.00 0.00 0.00 6.13
41 42 1.816074 TGGTTAGTTTCCATGTCCGC 58.184 50.000 0.00 0.00 0.00 5.54
42 43 3.566322 TGTTTGGTTAGTTTCCATGTCCG 59.434 43.478 0.00 0.00 34.75 4.79
43 44 4.558697 GCTGTTTGGTTAGTTTCCATGTCC 60.559 45.833 0.00 0.00 34.75 4.02
44 45 4.546570 GCTGTTTGGTTAGTTTCCATGTC 58.453 43.478 0.00 0.00 34.75 3.06
45 46 3.320826 GGCTGTTTGGTTAGTTTCCATGT 59.679 43.478 0.00 0.00 34.75 3.21
46 47 3.306019 GGGCTGTTTGGTTAGTTTCCATG 60.306 47.826 0.00 0.00 34.75 3.66
47 48 2.897326 GGGCTGTTTGGTTAGTTTCCAT 59.103 45.455 0.00 0.00 34.75 3.41
48 49 2.312390 GGGCTGTTTGGTTAGTTTCCA 58.688 47.619 0.00 0.00 0.00 3.53
49 50 1.616865 GGGGCTGTTTGGTTAGTTTCC 59.383 52.381 0.00 0.00 0.00 3.13
50 51 2.296190 CAGGGGCTGTTTGGTTAGTTTC 59.704 50.000 0.00 0.00 0.00 2.78
51 52 2.316108 CAGGGGCTGTTTGGTTAGTTT 58.684 47.619 0.00 0.00 0.00 2.66
52 53 1.216930 ACAGGGGCTGTTTGGTTAGTT 59.783 47.619 0.00 0.00 42.59 2.24
53 54 0.850784 ACAGGGGCTGTTTGGTTAGT 59.149 50.000 0.00 0.00 42.59 2.24
54 55 2.871096 TACAGGGGCTGTTTGGTTAG 57.129 50.000 0.00 0.00 42.59 2.34
55 56 2.025699 GGATACAGGGGCTGTTTGGTTA 60.026 50.000 0.00 0.00 42.59 2.85
56 57 1.272480 GGATACAGGGGCTGTTTGGTT 60.272 52.381 0.00 0.00 42.59 3.67
57 58 0.331616 GGATACAGGGGCTGTTTGGT 59.668 55.000 0.00 0.00 42.59 3.67
58 59 0.395724 GGGATACAGGGGCTGTTTGG 60.396 60.000 0.00 0.00 42.59 3.28
59 60 0.331278 TGGGATACAGGGGCTGTTTG 59.669 55.000 0.00 0.00 42.59 2.93
60 61 0.331616 GTGGGATACAGGGGCTGTTT 59.668 55.000 0.00 0.00 42.59 2.83
61 62 0.844661 TGTGGGATACAGGGGCTGTT 60.845 55.000 0.00 0.00 42.59 3.16
63 64 1.224592 GTGTGGGATACAGGGGCTG 59.775 63.158 0.00 0.00 40.69 4.85
64 65 0.844661 TTGTGTGGGATACAGGGGCT 60.845 55.000 0.00 0.00 40.69 5.19
65 66 0.039035 TTTGTGTGGGATACAGGGGC 59.961 55.000 0.00 0.00 40.69 5.80
66 67 2.595750 TTTTGTGTGGGATACAGGGG 57.404 50.000 0.00 0.00 40.69 4.79
67 68 4.037923 GCATATTTTGTGTGGGATACAGGG 59.962 45.833 0.00 0.00 40.69 4.45
68 69 4.644234 TGCATATTTTGTGTGGGATACAGG 59.356 41.667 0.00 0.00 40.69 4.00
69 70 5.833406 TGCATATTTTGTGTGGGATACAG 57.167 39.130 0.00 0.00 40.69 2.74
120 121 4.946157 ACCGATGAAGCTTGAGATGAAATT 59.054 37.500 2.10 0.00 0.00 1.82
136 137 2.133195 GGGCAGTATGGACCGATGA 58.867 57.895 0.00 0.00 35.86 2.92
174 175 1.228613 CAAACCCTGCCCCGGTAAA 60.229 57.895 0.00 0.00 31.69 2.01
175 176 2.132089 CTCAAACCCTGCCCCGGTAA 62.132 60.000 0.00 0.00 31.69 2.85
176 177 2.529643 TCAAACCCTGCCCCGGTA 60.530 61.111 0.00 0.00 31.69 4.02
274 275 2.687935 TGGTCAAGTTCAAGGCAAAGTC 59.312 45.455 0.00 0.00 0.00 3.01
301 302 7.659186 TGTAGAACTCTAGACACTTTTCCTTC 58.341 38.462 0.00 0.00 0.00 3.46
414 416 3.402628 ACCAACTAGAAAGTGATGCGT 57.597 42.857 0.00 0.00 35.62 5.24
416 418 6.985188 TTCATACCAACTAGAAAGTGATGC 57.015 37.500 0.00 0.00 35.62 3.91
423 425 6.395780 TGGGGAATTCATACCAACTAGAAA 57.604 37.500 7.93 0.00 0.00 2.52
426 428 6.364701 TCATTGGGGAATTCATACCAACTAG 58.635 40.000 22.72 17.31 44.89 2.57
446 448 7.275779 GCGTATTAGGATATGTGAACGATCATT 59.724 37.037 0.00 0.00 38.01 2.57
773 802 8.721019 AATATTTGAATTATGTTTGCAGTGGG 57.279 30.769 0.00 0.00 0.00 4.61
858 1148 5.130350 TCCCTGTCACTTCCTTTGTTTAAG 58.870 41.667 0.00 0.00 0.00 1.85
928 1221 3.223423 TCGTTGAGCAGAGATGAGAAC 57.777 47.619 0.00 0.00 0.00 3.01
956 1259 3.495453 CGGATGGAATTTATACCGGTGGT 60.495 47.826 19.93 8.60 40.16 4.16
1001 1358 2.109181 GCCGTGCTACTGGGATCC 59.891 66.667 1.92 1.92 0.00 3.36
1096 1453 3.701542 TGGTTTTGCTGTGTGGTCATTTA 59.298 39.130 0.00 0.00 0.00 1.40
1097 1454 2.499289 TGGTTTTGCTGTGTGGTCATTT 59.501 40.909 0.00 0.00 0.00 2.32
1098 1455 2.106566 TGGTTTTGCTGTGTGGTCATT 58.893 42.857 0.00 0.00 0.00 2.57
1205 1592 2.737376 GTGTCGAACGGGAGCACC 60.737 66.667 0.00 0.00 0.00 5.01
1253 1640 3.305720 GTGGTGGTACTGGGAGATCATA 58.694 50.000 0.00 0.00 0.00 2.15
1257 1644 0.252103 ACGTGGTGGTACTGGGAGAT 60.252 55.000 0.00 0.00 0.00 2.75
1266 1653 1.295101 CATGCTGGACGTGGTGGTA 59.705 57.895 0.00 0.00 0.00 3.25
1406 1808 2.473760 CGAGTCACGGATCTCGGCT 61.474 63.158 14.36 0.00 46.26 5.52
1532 1934 1.084370 CATGGTCGGCGGAGAAGTTC 61.084 60.000 7.21 0.00 0.00 3.01
1807 2217 2.512692 TCAAGTCATGGAATGGTGGG 57.487 50.000 0.00 0.00 46.73 4.61
1814 2224 3.525537 GAGCGATCTTCAAGTCATGGAA 58.474 45.455 0.00 0.00 0.00 3.53
1966 2571 3.543680 TTCATTTTGACGGGGCAAAAA 57.456 38.095 15.69 0.00 46.91 1.94
1968 2573 2.289320 CCATTCATTTTGACGGGGCAAA 60.289 45.455 0.00 0.00 36.08 3.68
1969 2574 1.274728 CCATTCATTTTGACGGGGCAA 59.725 47.619 0.00 0.00 0.00 4.52
1970 2575 0.894141 CCATTCATTTTGACGGGGCA 59.106 50.000 0.00 0.00 0.00 5.36
1971 2576 0.894835 ACCATTCATTTTGACGGGGC 59.105 50.000 0.00 0.00 0.00 5.80
1972 2577 3.676291 AAACCATTCATTTTGACGGGG 57.324 42.857 0.00 0.00 0.00 5.73
1973 2578 3.745458 CCAAAACCATTCATTTTGACGGG 59.255 43.478 10.89 0.00 45.75 5.28
1974 2579 4.626042 TCCAAAACCATTCATTTTGACGG 58.374 39.130 10.89 0.00 45.75 4.79
1975 2580 5.389725 GCATCCAAAACCATTCATTTTGACG 60.390 40.000 10.89 2.00 45.75 4.35
1999 4188 3.149196 TCTTGCCAAGCTTTAGGTGAAG 58.851 45.455 0.00 3.62 0.00 3.02
2181 4447 6.425417 TCTTGTGTTTATAATTGCACGTGAGA 59.575 34.615 22.23 6.76 34.86 3.27
2210 4477 6.651086 AGTAGGTATACCTTTCTCCTTTTGC 58.349 40.000 29.09 5.18 46.09 3.68
2223 4490 6.462552 AGAAGGACGAAAAGTAGGTATACC 57.537 41.667 14.54 14.54 31.78 2.73
2238 4505 4.979388 ACTACGCTAAAAGTAGAAGGACG 58.021 43.478 9.96 0.00 43.00 4.79
2253 4520 8.827677 GGTATCAAATCAAATCTAAACTACGCT 58.172 33.333 0.00 0.00 0.00 5.07
2283 4550 9.321562 ACGTGAAGTTGTCGGATTATATAAAAT 57.678 29.630 0.00 0.00 0.00 1.82
2284 4551 8.706492 ACGTGAAGTTGTCGGATTATATAAAA 57.294 30.769 0.00 0.00 0.00 1.52
2285 4552 8.706492 AACGTGAAGTTGTCGGATTATATAAA 57.294 30.769 0.00 0.00 42.39 1.40
2286 4553 7.975058 TGAACGTGAAGTTGTCGGATTATATAA 59.025 33.333 0.00 0.00 44.35 0.98
2287 4554 7.482474 TGAACGTGAAGTTGTCGGATTATATA 58.518 34.615 0.00 0.00 44.35 0.86
2288 4555 6.334989 TGAACGTGAAGTTGTCGGATTATAT 58.665 36.000 0.00 0.00 44.35 0.86
2289 4556 5.712004 TGAACGTGAAGTTGTCGGATTATA 58.288 37.500 0.00 0.00 44.35 0.98
2290 4557 4.562082 TGAACGTGAAGTTGTCGGATTAT 58.438 39.130 0.00 0.00 44.35 1.28
2291 4558 3.979948 TGAACGTGAAGTTGTCGGATTA 58.020 40.909 0.00 0.00 44.35 1.75
2296 4563 3.795101 AGTAGTTGAACGTGAAGTTGTCG 59.205 43.478 0.00 0.00 44.35 4.35
2308 4575 5.049886 CCTTGTCCGGTTTTAGTAGTTGAAC 60.050 44.000 0.00 0.00 0.00 3.18
2310 4577 4.101430 ACCTTGTCCGGTTTTAGTAGTTGA 59.899 41.667 0.00 0.00 31.94 3.18
2311 4578 4.383173 ACCTTGTCCGGTTTTAGTAGTTG 58.617 43.478 0.00 0.00 31.94 3.16
2319 4586 2.235891 GGATGAACCTTGTCCGGTTTT 58.764 47.619 0.00 0.00 46.85 2.43
2323 4590 1.449601 CGGGATGAACCTTGTCCGG 60.450 63.158 0.00 0.00 38.98 5.14
2325 4592 0.107654 CTCCGGGATGAACCTTGTCC 60.108 60.000 0.00 0.00 38.98 4.02
2341 4609 0.035739 TCAGTACCAAAACCGCCTCC 59.964 55.000 0.00 0.00 0.00 4.30
2344 4612 1.154197 GAGTCAGTACCAAAACCGCC 58.846 55.000 0.00 0.00 0.00 6.13
2351 4619 1.189524 CCGGGGTGAGTCAGTACCAA 61.190 60.000 9.83 0.00 38.74 3.67
2359 4627 2.148768 CAGTAAAAACCGGGGTGAGTC 58.851 52.381 6.32 0.00 0.00 3.36
2363 4631 0.312729 GCACAGTAAAAACCGGGGTG 59.687 55.000 6.32 2.06 0.00 4.61
2369 4637 4.893424 TTGAGTCAGCACAGTAAAAACC 57.107 40.909 0.00 0.00 0.00 3.27
2375 4643 4.450976 ACACAAATTGAGTCAGCACAGTA 58.549 39.130 0.00 0.00 0.00 2.74
2378 4646 3.563808 GGTACACAAATTGAGTCAGCACA 59.436 43.478 0.00 0.00 0.00 4.57
2409 4677 9.206870 GCCAATTCTTTTTAATCACAGATTTGA 57.793 29.630 0.00 0.00 32.21 2.69
2412 4680 7.378181 ACGCCAATTCTTTTTAATCACAGATT 58.622 30.769 0.00 0.00 0.00 2.40
2413 4681 6.924111 ACGCCAATTCTTTTTAATCACAGAT 58.076 32.000 0.00 0.00 0.00 2.90
2415 4683 8.687824 AATACGCCAATTCTTTTTAATCACAG 57.312 30.769 0.00 0.00 0.00 3.66
2439 4707 7.324135 GGAAAAGATACGTGCGTTTGAAAATAA 59.676 33.333 1.66 0.00 0.00 1.40
2448 4716 3.135994 ACTTGGAAAAGATACGTGCGTT 58.864 40.909 1.66 0.00 0.00 4.84
2450 4718 3.806316 AACTTGGAAAAGATACGTGCG 57.194 42.857 0.00 0.00 0.00 5.34
2451 4719 3.668656 GCAAACTTGGAAAAGATACGTGC 59.331 43.478 0.00 0.00 0.00 5.34
2452 4720 4.854399 TGCAAACTTGGAAAAGATACGTG 58.146 39.130 0.00 0.00 0.00 4.49
2455 4723 9.860898 AAAGATATGCAAACTTGGAAAAGATAC 57.139 29.630 0.00 0.00 30.51 2.24
2464 4732 7.329226 ACGAATTTGAAAGATATGCAAACTTGG 59.671 33.333 0.00 0.00 34.72 3.61
2468 4736 6.089283 TGCACGAATTTGAAAGATATGCAAAC 59.911 34.615 0.00 0.00 37.59 2.93
2470 4738 5.707931 TGCACGAATTTGAAAGATATGCAA 58.292 33.333 0.00 0.00 37.59 4.08
2471 4739 5.307926 TGCACGAATTTGAAAGATATGCA 57.692 34.783 0.00 0.23 38.17 3.96
2472 4740 5.745294 ACATGCACGAATTTGAAAGATATGC 59.255 36.000 0.00 0.00 0.00 3.14
2473 4741 7.745022 AACATGCACGAATTTGAAAGATATG 57.255 32.000 0.00 0.00 0.00 1.78
2474 4742 8.761575 AAAACATGCACGAATTTGAAAGATAT 57.238 26.923 0.00 0.00 0.00 1.63
2475 4743 8.586570 AAAAACATGCACGAATTTGAAAGATA 57.413 26.923 0.00 0.00 0.00 1.98
2476 4744 7.224362 TGAAAAACATGCACGAATTTGAAAGAT 59.776 29.630 0.00 0.00 0.00 2.40
2477 4745 6.533012 TGAAAAACATGCACGAATTTGAAAGA 59.467 30.769 0.00 0.00 0.00 2.52
2478 4746 6.703857 TGAAAAACATGCACGAATTTGAAAG 58.296 32.000 0.00 0.00 0.00 2.62
2479 4747 6.653273 TGAAAAACATGCACGAATTTGAAA 57.347 29.167 0.00 0.00 0.00 2.69
2480 4748 6.312426 ACTTGAAAAACATGCACGAATTTGAA 59.688 30.769 0.00 0.00 0.00 2.69
2481 4749 5.809562 ACTTGAAAAACATGCACGAATTTGA 59.190 32.000 0.00 0.00 0.00 2.69
2482 4750 6.035070 ACTTGAAAAACATGCACGAATTTG 57.965 33.333 0.00 0.00 0.00 2.32
2483 4751 5.234116 GGACTTGAAAAACATGCACGAATTT 59.766 36.000 0.00 0.00 0.00 1.82
2484 4752 4.744631 GGACTTGAAAAACATGCACGAATT 59.255 37.500 0.00 0.00 0.00 2.17
2485 4753 4.298332 GGACTTGAAAAACATGCACGAAT 58.702 39.130 0.00 0.00 0.00 3.34
2486 4754 3.701241 GGACTTGAAAAACATGCACGAA 58.299 40.909 0.00 0.00 0.00 3.85
2487 4755 2.286713 CGGACTTGAAAAACATGCACGA 60.287 45.455 0.00 0.00 32.38 4.35
2490 4758 2.685388 TCACGGACTTGAAAAACATGCA 59.315 40.909 0.00 0.00 0.00 3.96
2526 4794 6.314400 GTGCATGGATTTGAAAATAGCATGTT 59.686 34.615 0.00 0.00 30.48 2.71
2527 4795 5.813672 GTGCATGGATTTGAAAATAGCATGT 59.186 36.000 0.00 0.00 30.48 3.21
2531 4799 6.973229 AAAGTGCATGGATTTGAAAATAGC 57.027 33.333 0.00 0.00 0.00 2.97
2591 4861 6.535508 CAGGTTAACGAAATTTCCCACAAAAA 59.464 34.615 12.54 0.00 0.00 1.94
2597 4869 7.762588 TTATTCAGGTTAACGAAATTTCCCA 57.237 32.000 12.54 0.00 0.00 4.37
2610 4882 6.938507 ACATCGGTGTACTTTATTCAGGTTA 58.061 36.000 0.00 0.00 36.63 2.85
2643 4934 9.696917 AAGTTCGCTCATCTTTTTCAATTTTAT 57.303 25.926 0.00 0.00 0.00 1.40
2645 4936 7.706179 TCAAGTTCGCTCATCTTTTTCAATTTT 59.294 29.630 0.00 0.00 0.00 1.82
2646 4937 7.202526 TCAAGTTCGCTCATCTTTTTCAATTT 58.797 30.769 0.00 0.00 0.00 1.82
2648 4939 6.317789 TCAAGTTCGCTCATCTTTTTCAAT 57.682 33.333 0.00 0.00 0.00 2.57
2657 4948 7.290857 TGTACTTTATTCAAGTTCGCTCATC 57.709 36.000 0.00 0.00 43.89 2.92
2660 4951 7.290857 TCATGTACTTTATTCAAGTTCGCTC 57.709 36.000 0.00 0.00 43.89 5.03
2753 5045 6.851222 ATCCACGCACTTTTCTATTATCTG 57.149 37.500 0.00 0.00 0.00 2.90
2754 5046 7.552687 TCAAATCCACGCACTTTTCTATTATCT 59.447 33.333 0.00 0.00 0.00 1.98
2755 5047 7.693952 TCAAATCCACGCACTTTTCTATTATC 58.306 34.615 0.00 0.00 0.00 1.75
2756 5048 7.624360 TCAAATCCACGCACTTTTCTATTAT 57.376 32.000 0.00 0.00 0.00 1.28
2757 5049 7.441890 TTCAAATCCACGCACTTTTCTATTA 57.558 32.000 0.00 0.00 0.00 0.98
2758 5050 5.957842 TCAAATCCACGCACTTTTCTATT 57.042 34.783 0.00 0.00 0.00 1.73
2789 5082 7.360361 AGTCCTAATACTTTTTCAAGTTTGCG 58.640 34.615 0.00 0.00 40.66 4.85
2818 5111 2.962421 TGAAATCCGGGCACTTCTTTTT 59.038 40.909 0.00 0.00 0.00 1.94
2819 5112 2.593026 TGAAATCCGGGCACTTCTTTT 58.407 42.857 0.00 0.00 0.00 2.27
2820 5113 2.286365 TGAAATCCGGGCACTTCTTT 57.714 45.000 0.00 0.00 0.00 2.52
2821 5114 2.286365 TTGAAATCCGGGCACTTCTT 57.714 45.000 0.00 0.00 0.00 2.52
2822 5115 2.286365 TTTGAAATCCGGGCACTTCT 57.714 45.000 0.00 0.00 0.00 2.85
2823 5116 3.378911 TTTTTGAAATCCGGGCACTTC 57.621 42.857 0.00 0.01 0.00 3.01
2824 5117 5.675684 ATATTTTTGAAATCCGGGCACTT 57.324 34.783 0.00 0.00 0.00 3.16
2825 5118 6.239289 CCATATATTTTTGAAATCCGGGCACT 60.239 38.462 0.00 0.00 0.00 4.40
2826 5119 5.925969 CCATATATTTTTGAAATCCGGGCAC 59.074 40.000 0.00 0.00 0.00 5.01
2827 5120 5.835819 TCCATATATTTTTGAAATCCGGGCA 59.164 36.000 0.00 0.00 0.00 5.36
2828 5121 6.339587 TCCATATATTTTTGAAATCCGGGC 57.660 37.500 0.00 0.00 0.00 6.13
2829 5122 9.206870 CAAATCCATATATTTTTGAAATCCGGG 57.793 33.333 0.00 0.00 32.17 5.73
2830 5123 9.979578 TCAAATCCATATATTTTTGAAATCCGG 57.020 29.630 0.00 0.00 35.71 5.14
2857 5150 8.416329 AGCTGACTCAAATTCATGTAACTTTTT 58.584 29.630 0.00 0.00 0.00 1.94
2858 5151 7.945134 AGCTGACTCAAATTCATGTAACTTTT 58.055 30.769 0.00 0.00 0.00 2.27
2859 5152 7.516198 AGCTGACTCAAATTCATGTAACTTT 57.484 32.000 0.00 0.00 0.00 2.66
2860 5153 7.516198 AAGCTGACTCAAATTCATGTAACTT 57.484 32.000 0.00 0.00 0.00 2.66
2861 5154 6.128445 CGAAGCTGACTCAAATTCATGTAACT 60.128 38.462 0.00 0.00 0.00 2.24
2862 5155 6.017933 CGAAGCTGACTCAAATTCATGTAAC 58.982 40.000 0.00 0.00 0.00 2.50
2863 5156 5.122239 CCGAAGCTGACTCAAATTCATGTAA 59.878 40.000 0.00 0.00 0.00 2.41
2864 5157 4.631377 CCGAAGCTGACTCAAATTCATGTA 59.369 41.667 0.00 0.00 0.00 2.29
2865 5158 3.438087 CCGAAGCTGACTCAAATTCATGT 59.562 43.478 0.00 0.00 0.00 3.21
2866 5159 3.438087 ACCGAAGCTGACTCAAATTCATG 59.562 43.478 0.00 0.00 0.00 3.07
2867 5160 3.679389 ACCGAAGCTGACTCAAATTCAT 58.321 40.909 0.00 0.00 0.00 2.57
2868 5161 3.126001 ACCGAAGCTGACTCAAATTCA 57.874 42.857 0.00 0.00 0.00 2.57
2869 5162 5.607119 TTTACCGAAGCTGACTCAAATTC 57.393 39.130 0.00 0.00 0.00 2.17
2870 5163 6.385649 TTTTTACCGAAGCTGACTCAAATT 57.614 33.333 0.00 0.00 0.00 1.82
2890 5183 0.179051 TGCCGACCCACTACGTTTTT 60.179 50.000 0.00 0.00 0.00 1.94
2891 5184 0.881600 GTGCCGACCCACTACGTTTT 60.882 55.000 0.00 0.00 33.02 2.43
2892 5185 1.301165 GTGCCGACCCACTACGTTT 60.301 57.895 0.00 0.00 33.02 3.60
2893 5186 2.341176 GTGCCGACCCACTACGTT 59.659 61.111 0.00 0.00 33.02 3.99
2894 5187 3.688159 GGTGCCGACCCACTACGT 61.688 66.667 0.00 0.00 36.03 3.57
2895 5188 2.718747 TTTGGTGCCGACCCACTACG 62.719 60.000 0.00 0.00 42.34 3.51
2896 5189 0.535553 TTTTGGTGCCGACCCACTAC 60.536 55.000 0.00 0.00 42.34 2.73
2897 5190 0.535553 GTTTTGGTGCCGACCCACTA 60.536 55.000 0.00 0.00 42.34 2.74
2898 5191 1.826487 GTTTTGGTGCCGACCCACT 60.826 57.895 0.00 0.00 42.34 4.00
2899 5192 1.826487 AGTTTTGGTGCCGACCCAC 60.826 57.895 0.00 0.00 42.34 4.61
2900 5193 1.826054 CAGTTTTGGTGCCGACCCA 60.826 57.895 0.00 0.00 42.34 4.51
2901 5194 2.561037 CCAGTTTTGGTGCCGACCC 61.561 63.158 0.00 0.00 42.34 4.46
2902 5195 3.039134 CCAGTTTTGGTGCCGACC 58.961 61.111 0.00 0.00 43.48 4.79
2918 5211 2.820197 GTCCCTGATCTTGGTTTTCACC 59.180 50.000 0.00 0.00 44.56 4.02
2919 5212 2.484264 CGTCCCTGATCTTGGTTTTCAC 59.516 50.000 0.00 0.00 0.00 3.18
2920 5213 2.370519 TCGTCCCTGATCTTGGTTTTCA 59.629 45.455 0.00 0.00 0.00 2.69
2921 5214 3.053831 TCGTCCCTGATCTTGGTTTTC 57.946 47.619 0.00 0.00 0.00 2.29
2922 5215 3.502123 TTCGTCCCTGATCTTGGTTTT 57.498 42.857 0.00 0.00 0.00 2.43
2923 5216 3.264450 AGATTCGTCCCTGATCTTGGTTT 59.736 43.478 0.00 0.00 0.00 3.27
2924 5217 2.840651 AGATTCGTCCCTGATCTTGGTT 59.159 45.455 0.00 0.00 0.00 3.67
2925 5218 2.472029 AGATTCGTCCCTGATCTTGGT 58.528 47.619 0.00 0.00 0.00 3.67
2926 5219 3.201290 CAAGATTCGTCCCTGATCTTGG 58.799 50.000 14.41 0.00 42.47 3.61
2927 5220 5.213045 GGACAAGATTCGTCCCTGATCTTG 61.213 50.000 18.57 18.57 46.12 3.02
2928 5221 3.118592 GGACAAGATTCGTCCCTGATCTT 60.119 47.826 0.00 0.00 46.12 2.40
2929 5222 2.432510 GGACAAGATTCGTCCCTGATCT 59.567 50.000 0.00 0.00 46.12 2.75
2930 5223 2.827652 GGACAAGATTCGTCCCTGATC 58.172 52.381 0.00 0.00 46.12 2.92
2931 5224 2.990066 GGACAAGATTCGTCCCTGAT 57.010 50.000 0.00 0.00 46.12 2.90
2937 5230 2.157085 GTGAAACCGGACAAGATTCGTC 59.843 50.000 9.46 0.00 0.00 4.20
2938 5231 2.140717 GTGAAACCGGACAAGATTCGT 58.859 47.619 9.46 0.00 0.00 3.85
2939 5232 2.157668 CAGTGAAACCGGACAAGATTCG 59.842 50.000 9.46 0.00 37.80 3.34
2940 5233 2.484264 CCAGTGAAACCGGACAAGATTC 59.516 50.000 9.46 3.27 37.80 2.52
2941 5234 2.158667 ACCAGTGAAACCGGACAAGATT 60.159 45.455 9.46 0.00 37.80 2.40
2942 5235 1.420138 ACCAGTGAAACCGGACAAGAT 59.580 47.619 9.46 0.00 37.80 2.40
2943 5236 0.834612 ACCAGTGAAACCGGACAAGA 59.165 50.000 9.46 0.00 37.80 3.02
2944 5237 1.675552 AACCAGTGAAACCGGACAAG 58.324 50.000 9.46 1.97 37.80 3.16
2945 5238 1.746220 CAAACCAGTGAAACCGGACAA 59.254 47.619 9.46 0.00 37.80 3.18
2946 5239 1.384525 CAAACCAGTGAAACCGGACA 58.615 50.000 9.46 2.00 37.80 4.02
2947 5240 0.666374 CCAAACCAGTGAAACCGGAC 59.334 55.000 9.46 0.00 37.80 4.79
2948 5241 0.547075 TCCAAACCAGTGAAACCGGA 59.453 50.000 9.46 0.00 37.80 5.14
2949 5242 0.951558 CTCCAAACCAGTGAAACCGG 59.048 55.000 0.00 0.00 37.80 5.28
2950 5243 1.333619 CACTCCAAACCAGTGAAACCG 59.666 52.381 0.00 0.00 43.54 4.44
2951 5244 1.067060 GCACTCCAAACCAGTGAAACC 59.933 52.381 4.00 0.00 43.54 3.27
2952 5245 1.748493 TGCACTCCAAACCAGTGAAAC 59.252 47.619 4.00 0.00 43.54 2.78
2953 5246 2.136298 TGCACTCCAAACCAGTGAAA 57.864 45.000 4.00 0.00 43.54 2.69
2954 5247 2.023673 CTTGCACTCCAAACCAGTGAA 58.976 47.619 4.00 0.00 43.54 3.18
2955 5248 1.064758 ACTTGCACTCCAAACCAGTGA 60.065 47.619 4.00 0.00 43.54 3.41
2956 5249 1.392589 ACTTGCACTCCAAACCAGTG 58.607 50.000 0.00 0.00 43.66 3.66
2957 5250 1.750778 CAACTTGCACTCCAAACCAGT 59.249 47.619 0.00 0.00 31.94 4.00
2958 5251 1.750778 ACAACTTGCACTCCAAACCAG 59.249 47.619 0.00 0.00 31.94 4.00
2959 5252 1.748493 GACAACTTGCACTCCAAACCA 59.252 47.619 0.00 0.00 31.94 3.67
2960 5253 2.024414 AGACAACTTGCACTCCAAACC 58.976 47.619 0.00 0.00 31.94 3.27
2961 5254 2.223572 CCAGACAACTTGCACTCCAAAC 60.224 50.000 0.00 0.00 31.94 2.93
2962 5255 2.023673 CCAGACAACTTGCACTCCAAA 58.976 47.619 0.00 0.00 31.94 3.28
2963 5256 1.064758 ACCAGACAACTTGCACTCCAA 60.065 47.619 0.00 0.00 0.00 3.53
2964 5257 0.546122 ACCAGACAACTTGCACTCCA 59.454 50.000 0.00 0.00 0.00 3.86
2965 5258 1.680338 AACCAGACAACTTGCACTCC 58.320 50.000 0.00 0.00 0.00 3.85
2966 5259 3.782889 AAAACCAGACAACTTGCACTC 57.217 42.857 0.00 0.00 0.00 3.51
2967 5260 5.185056 ACTTTAAAACCAGACAACTTGCACT 59.815 36.000 0.00 0.00 0.00 4.40
2968 5261 5.407502 ACTTTAAAACCAGACAACTTGCAC 58.592 37.500 0.00 0.00 0.00 4.57
2969 5262 5.646606 GACTTTAAAACCAGACAACTTGCA 58.353 37.500 0.00 0.00 0.00 4.08
2970 5263 4.733405 CGACTTTAAAACCAGACAACTTGC 59.267 41.667 0.00 0.00 0.00 4.01
2971 5264 6.114221 TCGACTTTAAAACCAGACAACTTG 57.886 37.500 0.00 0.00 0.00 3.16
2972 5265 5.296035 CCTCGACTTTAAAACCAGACAACTT 59.704 40.000 0.00 0.00 0.00 2.66
2973 5266 4.814771 CCTCGACTTTAAAACCAGACAACT 59.185 41.667 0.00 0.00 0.00 3.16
2974 5267 4.024302 CCCTCGACTTTAAAACCAGACAAC 60.024 45.833 0.00 0.00 0.00 3.32
2975 5268 4.131596 CCCTCGACTTTAAAACCAGACAA 58.868 43.478 0.00 0.00 0.00 3.18
2976 5269 3.495453 CCCCTCGACTTTAAAACCAGACA 60.495 47.826 0.00 0.00 0.00 3.41
2977 5270 3.072211 CCCCTCGACTTTAAAACCAGAC 58.928 50.000 0.00 0.00 0.00 3.51
2978 5271 2.551504 GCCCCTCGACTTTAAAACCAGA 60.552 50.000 0.00 0.00 0.00 3.86
2979 5272 1.810755 GCCCCTCGACTTTAAAACCAG 59.189 52.381 0.00 0.00 0.00 4.00
2980 5273 1.422402 AGCCCCTCGACTTTAAAACCA 59.578 47.619 0.00 0.00 0.00 3.67
2981 5274 2.195741 AGCCCCTCGACTTTAAAACC 57.804 50.000 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.