Multiple sequence alignment - TraesCS4A01G311800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G311800 chr4A 100.000 3920 0 0 1 3920 603500122 603496203 0.000000e+00 7239.0
1 TraesCS4A01G311800 chr4A 93.902 82 5 0 156 237 716970861 716970942 1.480000e-24 124.0
2 TraesCS4A01G311800 chr4D 85.448 2735 195 80 325 2947 1257399 1260042 0.000000e+00 2658.0
3 TraesCS4A01G311800 chr4D 83.268 257 26 9 3141 3395 1260351 1260592 1.830000e-53 220.0
4 TraesCS4A01G311800 chr4D 79.724 217 16 15 3419 3618 1260649 1260854 8.840000e-27 132.0
5 TraesCS4A01G311800 chr4D 80.769 104 11 4 2946 3048 1260172 1260267 5.430000e-09 73.1
6 TraesCS4A01G311800 chr4B 90.250 2000 123 26 989 2947 559304 557336 0.000000e+00 2547.0
7 TraesCS4A01G311800 chr4B 86.333 1039 88 15 977 2003 128953791 128954787 0.000000e+00 1083.0
8 TraesCS4A01G311800 chr4B 88.047 343 18 12 2946 3284 557174 556851 6.140000e-103 385.0
9 TraesCS4A01G311800 chr4B 89.726 146 6 3 3309 3454 556471 556335 1.120000e-40 178.0
10 TraesCS4A01G311800 chr4B 83.234 167 16 4 419 578 559917 559756 4.080000e-30 143.0
11 TraesCS4A01G311800 chr4B 80.476 210 13 10 664 858 559689 559493 6.830000e-28 135.0
12 TraesCS4A01G311800 chr4B 89.286 84 7 2 1 83 560290 560208 1.930000e-18 104.0
13 TraesCS4A01G311800 chr4B 93.548 62 2 2 3855 3915 555775 555715 1.500000e-14 91.6
14 TraesCS4A01G311800 chr2B 86.004 1036 94 16 977 2003 99543076 99544069 0.000000e+00 1062.0
15 TraesCS4A01G311800 chr2B 87.097 62 2 5 3123 3184 136176102 136176047 9.090000e-07 65.8
16 TraesCS4A01G311800 chr5B 86.327 1002 91 15 1009 2006 347978538 347977579 0.000000e+00 1050.0
17 TraesCS4A01G311800 chr5B 92.593 81 6 0 157 237 519184949 519185029 2.470000e-22 117.0
18 TraesCS4A01G311800 chr7A 86.125 1009 86 16 1009 2006 49205661 49204696 0.000000e+00 1038.0
19 TraesCS4A01G311800 chr7A 94.444 90 4 1 148 237 712449746 712449834 1.900000e-28 137.0
20 TraesCS4A01G311800 chr7A 85.000 80 7 3 3094 3168 504220499 504220420 4.200000e-10 76.8
21 TraesCS4A01G311800 chr3B 85.467 1039 97 14 977 2003 513682582 513683578 0.000000e+00 1033.0
22 TraesCS4A01G311800 chr3B 84.605 773 74 14 977 1737 513680470 513681209 0.000000e+00 726.0
23 TraesCS4A01G311800 chr3B 84.476 773 75 14 977 1737 513678345 513679084 0.000000e+00 721.0
24 TraesCS4A01G311800 chr3B 94.186 86 4 1 153 237 448566584 448566669 3.180000e-26 130.0
25 TraesCS4A01G311800 chr3B 84.211 76 8 2 3094 3168 160135362 160135290 1.950000e-08 71.3
26 TraesCS4A01G311800 chr6B 85.800 1000 91 12 1011 2006 648274476 648273524 0.000000e+00 1013.0
27 TraesCS4A01G311800 chr6B 95.181 83 4 0 155 237 700610233 700610315 8.840000e-27 132.0
28 TraesCS4A01G311800 chr6B 93.976 83 5 0 155 237 146644286 146644368 4.110000e-25 126.0
29 TraesCS4A01G311800 chr2A 86.405 765 84 12 966 1721 309468322 309469075 0.000000e+00 819.0
30 TraesCS4A01G311800 chr2A 98.795 83 1 0 155 237 7733947 7734029 8.780000e-32 148.0
31 TraesCS4A01G311800 chr2A 81.176 85 7 4 3094 3169 82346314 82346230 4.230000e-05 60.2
32 TraesCS4A01G311800 chr1A 98.795 83 1 0 155 237 472428977 472429059 8.780000e-32 148.0
33 TraesCS4A01G311800 chr6A 94.565 92 4 1 147 237 11962095 11962186 1.470000e-29 141.0
34 TraesCS4A01G311800 chr7B 91.781 73 5 1 3094 3165 450588256 450588328 2.490000e-17 100.0
35 TraesCS4A01G311800 chr7B 84.000 75 9 3 3096 3168 450588328 450588255 7.030000e-08 69.4
36 TraesCS4A01G311800 chr2D 83.117 77 12 1 3094 3169 5322730 5322654 7.030000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G311800 chr4A 603496203 603500122 3919 True 7239.000000 7239 100.000000 1 3920 1 chr4A.!!$R1 3919
1 TraesCS4A01G311800 chr4D 1257399 1260854 3455 False 770.775000 2658 82.302250 325 3618 4 chr4D.!!$F1 3293
2 TraesCS4A01G311800 chr4B 128953791 128954787 996 False 1083.000000 1083 86.333000 977 2003 1 chr4B.!!$F1 1026
3 TraesCS4A01G311800 chr4B 555715 560290 4575 True 511.942857 2547 87.795286 1 3915 7 chr4B.!!$R1 3914
4 TraesCS4A01G311800 chr2B 99543076 99544069 993 False 1062.000000 1062 86.004000 977 2003 1 chr2B.!!$F1 1026
5 TraesCS4A01G311800 chr5B 347977579 347978538 959 True 1050.000000 1050 86.327000 1009 2006 1 chr5B.!!$R1 997
6 TraesCS4A01G311800 chr7A 49204696 49205661 965 True 1038.000000 1038 86.125000 1009 2006 1 chr7A.!!$R1 997
7 TraesCS4A01G311800 chr3B 513678345 513683578 5233 False 826.666667 1033 84.849333 977 2003 3 chr3B.!!$F2 1026
8 TraesCS4A01G311800 chr6B 648273524 648274476 952 True 1013.000000 1013 85.800000 1011 2006 1 chr6B.!!$R1 995
9 TraesCS4A01G311800 chr2A 309468322 309469075 753 False 819.000000 819 86.405000 966 1721 1 chr2A.!!$F2 755

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
787 900 0.106217 CACTCCTCTCCTCCTCCTCC 60.106 65.0 0.00 0.0 0.0 4.30 F
907 1056 0.108615 CAGGTCTGATCCGCGTTCTT 60.109 55.0 4.92 0.0 0.0 2.52 F
1919 6418 0.041839 CAACAACTCGTGCTGCTGTC 60.042 55.0 0.00 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1744 6195 0.316204 CTTGCAGGGCTGAACCTTTG 59.684 55.0 0.0 0.0 39.34 2.77 R
2874 7394 0.472471 TTGAACAAGAGGCCGTCCTT 59.528 50.0 0.0 0.0 44.46 3.36 R
3459 8587 0.034616 GAGTTGAGTGAGTGGCAGCT 59.965 55.0 0.0 0.0 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 6.745116 CATGATGATGCATGTAAAGATTGGT 58.255 36.000 2.46 0.00 40.52 3.67
37 38 6.381481 TGATGATGCATGTAAAGATTGGTC 57.619 37.500 2.46 0.00 0.00 4.02
38 39 5.887035 TGATGATGCATGTAAAGATTGGTCA 59.113 36.000 2.46 0.00 0.00 4.02
40 41 4.398988 TGATGCATGTAAAGATTGGTCACC 59.601 41.667 2.46 0.00 0.00 4.02
41 42 4.032960 TGCATGTAAAGATTGGTCACCT 57.967 40.909 0.00 0.00 0.00 4.00
42 43 4.406456 TGCATGTAAAGATTGGTCACCTT 58.594 39.130 0.00 0.00 0.00 3.50
43 44 5.565509 TGCATGTAAAGATTGGTCACCTTA 58.434 37.500 0.00 0.00 0.00 2.69
45 46 6.663093 TGCATGTAAAGATTGGTCACCTTATT 59.337 34.615 0.00 0.00 0.00 1.40
49 50 9.614792 ATGTAAAGATTGGTCACCTTATTAGTC 57.385 33.333 0.00 0.00 0.00 2.59
79 80 2.100584 CTGCTCTGCTAGAGTGGTTAGG 59.899 54.545 12.71 0.00 44.12 2.69
83 84 3.878131 CTCTGCTAGAGTGGTTAGGACCA 60.878 52.174 0.00 0.00 42.49 4.02
108 109 6.886178 GGGGGTAATATAAGATGCTAGGAA 57.114 41.667 0.00 0.00 0.00 3.36
132 133 7.112452 AGTAGCCATTATTGGAAATTGGTTC 57.888 36.000 7.86 0.00 46.92 3.62
135 136 7.112452 AGCCATTATTGGAAATTGGTTCTAC 57.888 36.000 7.86 0.00 46.92 2.59
145 146 9.594478 TTGGAAATTGGTTCTACTTTTCTTTTC 57.406 29.630 0.00 0.00 36.40 2.29
146 147 8.977412 TGGAAATTGGTTCTACTTTTCTTTTCT 58.023 29.630 0.00 0.00 36.40 2.52
147 148 9.817809 GGAAATTGGTTCTACTTTTCTTTTCTT 57.182 29.630 0.00 0.00 36.40 2.52
176 177 3.426787 TTTTTGACGGGAATAGCAGGA 57.573 42.857 0.00 0.00 0.00 3.86
177 178 2.691409 TTTGACGGGAATAGCAGGAG 57.309 50.000 0.00 0.00 0.00 3.69
178 179 0.178068 TTGACGGGAATAGCAGGAGC 59.822 55.000 0.00 0.00 42.56 4.70
189 190 3.588336 CAGGAGCTCTGCCTTTGC 58.412 61.111 14.64 0.00 36.60 3.68
204 205 6.932356 TGCCTTTGCATTATAGAAGAGAAG 57.068 37.500 0.00 0.00 44.23 2.85
205 206 6.653020 TGCCTTTGCATTATAGAAGAGAAGA 58.347 36.000 0.00 0.00 44.23 2.87
206 207 6.540189 TGCCTTTGCATTATAGAAGAGAAGAC 59.460 38.462 0.00 0.00 44.23 3.01
207 208 6.540189 GCCTTTGCATTATAGAAGAGAAGACA 59.460 38.462 0.00 0.00 37.47 3.41
208 209 7.228308 GCCTTTGCATTATAGAAGAGAAGACAT 59.772 37.037 0.00 0.00 37.47 3.06
209 210 9.770097 CCTTTGCATTATAGAAGAGAAGACATA 57.230 33.333 0.00 0.00 0.00 2.29
213 214 9.579932 TGCATTATAGAAGAGAAGACATAGAGA 57.420 33.333 0.00 0.00 0.00 3.10
218 219 6.202516 AGAAGAGAAGACATAGAGAAACGG 57.797 41.667 0.00 0.00 0.00 4.44
219 220 5.946972 AGAAGAGAAGACATAGAGAAACGGA 59.053 40.000 0.00 0.00 0.00 4.69
220 221 6.605594 AGAAGAGAAGACATAGAGAAACGGAT 59.394 38.462 0.00 0.00 0.00 4.18
221 222 6.142818 AGAGAAGACATAGAGAAACGGATG 57.857 41.667 0.00 0.00 0.00 3.51
222 223 5.068460 AGAGAAGACATAGAGAAACGGATGG 59.932 44.000 0.00 0.00 0.00 3.51
223 224 4.956700 AGAAGACATAGAGAAACGGATGGA 59.043 41.667 0.00 0.00 0.00 3.41
224 225 4.657436 AGACATAGAGAAACGGATGGAC 57.343 45.455 0.00 0.00 0.00 4.02
225 226 3.385111 AGACATAGAGAAACGGATGGACC 59.615 47.826 0.00 0.00 0.00 4.46
226 227 3.104512 ACATAGAGAAACGGATGGACCA 58.895 45.455 0.00 0.00 38.90 4.02
227 228 3.517901 ACATAGAGAAACGGATGGACCAA 59.482 43.478 0.00 0.00 38.90 3.67
228 229 2.474410 AGAGAAACGGATGGACCAAC 57.526 50.000 0.00 0.00 38.90 3.77
229 230 1.076332 GAGAAACGGATGGACCAACG 58.924 55.000 17.38 17.38 38.90 4.10
230 231 0.682852 AGAAACGGATGGACCAACGA 59.317 50.000 23.62 0.00 38.90 3.85
231 232 1.076332 GAAACGGATGGACCAACGAG 58.924 55.000 23.62 10.65 38.90 4.18
236 237 0.461961 GGATGGACCAACGAGAGGAG 59.538 60.000 0.00 0.00 38.79 3.69
242 243 1.153667 CCAACGAGAGGAGCTGCTC 60.154 63.158 26.38 26.38 0.00 4.26
262 263 7.594015 GCTGCTCATTTATTCCAGATAATGTTG 59.406 37.037 0.00 0.00 31.59 3.33
263 264 8.750515 TGCTCATTTATTCCAGATAATGTTGA 57.249 30.769 0.00 0.00 31.59 3.18
264 265 8.843262 TGCTCATTTATTCCAGATAATGTTGAG 58.157 33.333 0.00 0.00 31.59 3.02
266 267 9.347240 CTCATTTATTCCAGATAATGTTGAGGT 57.653 33.333 0.00 0.00 31.59 3.85
274 275 6.016360 TCCAGATAATGTTGAGGTTTGTGTTG 60.016 38.462 0.00 0.00 0.00 3.33
278 279 2.166829 TGTTGAGGTTTGTGTTGTGCT 58.833 42.857 0.00 0.00 0.00 4.40
284 285 4.642437 TGAGGTTTGTGTTGTGCTAAATCA 59.358 37.500 0.00 0.00 0.00 2.57
290 291 5.375417 TGTGTTGTGCTAAATCAAGGATG 57.625 39.130 0.00 0.00 0.00 3.51
293 294 6.658816 TGTGTTGTGCTAAATCAAGGATGTAT 59.341 34.615 0.00 0.00 0.00 2.29
299 300 5.994054 TGCTAAATCAAGGATGTATCTCAGC 59.006 40.000 0.00 0.00 0.00 4.26
307 308 4.414677 AGGATGTATCTCAGCTCTATGCA 58.585 43.478 0.00 0.00 45.94 3.96
308 309 5.024785 AGGATGTATCTCAGCTCTATGCAT 58.975 41.667 3.79 3.79 45.94 3.96
309 310 5.127519 AGGATGTATCTCAGCTCTATGCATC 59.872 44.000 0.19 16.11 45.94 3.91
311 312 3.192212 TGTATCTCAGCTCTATGCATCCG 59.808 47.826 0.19 0.00 45.94 4.18
312 313 1.986882 TCTCAGCTCTATGCATCCGA 58.013 50.000 0.19 0.00 45.94 4.55
313 314 2.310538 TCTCAGCTCTATGCATCCGAA 58.689 47.619 0.19 0.00 45.94 4.30
314 315 2.896044 TCTCAGCTCTATGCATCCGAAT 59.104 45.455 0.19 0.00 45.94 3.34
315 316 3.323115 TCTCAGCTCTATGCATCCGAATT 59.677 43.478 0.19 0.00 45.94 2.17
316 317 4.063689 CTCAGCTCTATGCATCCGAATTT 58.936 43.478 0.19 0.00 45.94 1.82
317 318 4.060900 TCAGCTCTATGCATCCGAATTTC 58.939 43.478 0.19 0.00 45.94 2.17
319 386 4.514441 CAGCTCTATGCATCCGAATTTCTT 59.486 41.667 0.19 0.00 45.94 2.52
321 388 6.203530 CAGCTCTATGCATCCGAATTTCTTTA 59.796 38.462 0.19 0.00 45.94 1.85
323 390 8.097038 AGCTCTATGCATCCGAATTTCTTTATA 58.903 33.333 0.19 0.00 45.94 0.98
358 425 9.829507 TTTGTCACTTGATTGGAAAATTTATGT 57.170 25.926 0.00 0.00 0.00 2.29
361 428 9.906660 GTCACTTGATTGGAAAATTTATGTGTA 57.093 29.630 0.00 0.00 0.00 2.90
374 450 6.985188 ATTTATGTGTAACTGCACTAGTGG 57.015 37.500 23.95 10.99 40.26 4.00
392 468 8.375493 ACTAGTGGTGAGTATGAAAGGAATTA 57.625 34.615 0.00 0.00 0.00 1.40
399 475 8.979574 GGTGAGTATGAAAGGAATTATCTTACG 58.020 37.037 0.00 0.00 32.20 3.18
427 503 2.034878 TGTATCAGCTAGCTCCAGGTG 58.965 52.381 16.15 9.04 43.78 4.00
429 505 2.893441 TCAGCTAGCTCCAGGTGAG 58.107 57.895 16.15 0.57 45.52 3.51
476 559 2.948720 AAGAGGCGCTCCACTCACC 61.949 63.158 7.64 0.00 36.20 4.02
504 587 0.109272 CTGCAGTGGAAGCAAGCATG 60.109 55.000 5.25 0.00 42.17 4.06
505 588 1.214589 GCAGTGGAAGCAAGCATGG 59.785 57.895 0.00 0.00 0.00 3.66
506 589 1.888018 CAGTGGAAGCAAGCATGGG 59.112 57.895 0.00 0.00 0.00 4.00
520 605 1.756538 GCATGGGGGTATGTGGAAAAG 59.243 52.381 0.00 0.00 0.00 2.27
525 610 1.005450 GGGGTATGTGGAAAAGGCTGA 59.995 52.381 0.00 0.00 0.00 4.26
557 649 2.224606 CAAAGCAGTGCTCAGGAAAGA 58.775 47.619 20.03 0.00 38.25 2.52
558 650 2.181954 AAGCAGTGCTCAGGAAAGAG 57.818 50.000 20.03 0.00 38.25 2.85
570 662 1.074566 AGGAAAGAGGAAAGGTGGCTG 59.925 52.381 0.00 0.00 0.00 4.85
596 709 4.469657 TGCATGGAGTAAAAGTGAAACCT 58.530 39.130 0.00 0.00 37.80 3.50
597 710 4.278170 TGCATGGAGTAAAAGTGAAACCTG 59.722 41.667 0.00 0.00 37.80 4.00
598 711 4.798574 CATGGAGTAAAAGTGAAACCTGC 58.201 43.478 0.00 0.00 37.80 4.85
599 712 3.219281 TGGAGTAAAAGTGAAACCTGCC 58.781 45.455 0.00 0.00 37.80 4.85
603 716 2.577449 AAAAGTGAAACCTGCCAACG 57.423 45.000 0.00 0.00 37.80 4.10
606 719 1.021968 AGTGAAACCTGCCAACGAAC 58.978 50.000 0.00 0.00 37.80 3.95
625 738 4.636249 GAACCAAATCTCACTCACTCACT 58.364 43.478 0.00 0.00 0.00 3.41
627 740 3.643320 ACCAAATCTCACTCACTCACTCA 59.357 43.478 0.00 0.00 0.00 3.41
629 742 4.262377 CCAAATCTCACTCACTCACTCACT 60.262 45.833 0.00 0.00 0.00 3.41
631 744 3.214696 TCTCACTCACTCACTCACTCA 57.785 47.619 0.00 0.00 0.00 3.41
633 746 2.884012 CTCACTCACTCACTCACTCACT 59.116 50.000 0.00 0.00 0.00 3.41
634 747 2.881513 TCACTCACTCACTCACTCACTC 59.118 50.000 0.00 0.00 0.00 3.51
635 748 2.620585 CACTCACTCACTCACTCACTCA 59.379 50.000 0.00 0.00 0.00 3.41
636 749 2.621055 ACTCACTCACTCACTCACTCAC 59.379 50.000 0.00 0.00 0.00 3.51
637 750 1.957177 TCACTCACTCACTCACTCACC 59.043 52.381 0.00 0.00 0.00 4.02
638 751 1.000283 CACTCACTCACTCACTCACCC 60.000 57.143 0.00 0.00 0.00 4.61
639 752 0.605589 CTCACTCACTCACTCACCCC 59.394 60.000 0.00 0.00 0.00 4.95
655 768 3.464207 CCCCCACGTACACCAATAC 57.536 57.895 0.00 0.00 0.00 1.89
656 769 0.107557 CCCCCACGTACACCAATACC 60.108 60.000 0.00 0.00 0.00 2.73
657 770 0.107557 CCCCACGTACACCAATACCC 60.108 60.000 0.00 0.00 0.00 3.69
658 771 0.614294 CCCACGTACACCAATACCCA 59.386 55.000 0.00 0.00 0.00 4.51
659 772 1.406341 CCCACGTACACCAATACCCAG 60.406 57.143 0.00 0.00 0.00 4.45
660 773 1.365699 CACGTACACCAATACCCAGC 58.634 55.000 0.00 0.00 0.00 4.85
661 774 0.978151 ACGTACACCAATACCCAGCA 59.022 50.000 0.00 0.00 0.00 4.41
662 775 1.066430 ACGTACACCAATACCCAGCAG 60.066 52.381 0.00 0.00 0.00 4.24
674 787 0.959372 CCCAGCAGAGCAAGTCCAAG 60.959 60.000 0.00 0.00 0.00 3.61
764 877 7.982354 CCCGTATCTCTTTCATTCTTTCTTACT 59.018 37.037 0.00 0.00 0.00 2.24
783 896 2.099405 CTCAACACTCCTCTCCTCCTC 58.901 57.143 0.00 0.00 0.00 3.71
785 898 1.089123 AACACTCCTCTCCTCCTCCT 58.911 55.000 0.00 0.00 0.00 3.69
786 899 0.629058 ACACTCCTCTCCTCCTCCTC 59.371 60.000 0.00 0.00 0.00 3.71
787 900 0.106217 CACTCCTCTCCTCCTCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
788 901 0.254107 ACTCCTCTCCTCCTCCTCCT 60.254 60.000 0.00 0.00 0.00 3.69
790 903 0.996762 TCCTCTCCTCCTCCTCCTCC 60.997 65.000 0.00 0.00 0.00 4.30
791 904 0.998945 CCTCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
792 905 0.478507 CTCTCCTCCTCCTCCTCCTC 59.521 65.000 0.00 0.00 0.00 3.71
794 907 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
795 908 0.350904 TCCTCCTCCTCCTCCTCCTA 59.649 60.000 0.00 0.00 0.00 2.94
859 993 2.029918 GGGAAGACCAAGCACAACAATC 60.030 50.000 0.00 0.00 39.85 2.67
860 994 2.887152 GGAAGACCAAGCACAACAATCT 59.113 45.455 0.00 0.00 35.97 2.40
862 996 3.213206 AGACCAAGCACAACAATCTCA 57.787 42.857 0.00 0.00 0.00 3.27
863 997 2.880890 AGACCAAGCACAACAATCTCAC 59.119 45.455 0.00 0.00 0.00 3.51
864 998 2.880890 GACCAAGCACAACAATCTCACT 59.119 45.455 0.00 0.00 0.00 3.41
865 999 2.620115 ACCAAGCACAACAATCTCACTG 59.380 45.455 0.00 0.00 0.00 3.66
866 1000 2.880268 CCAAGCACAACAATCTCACTGA 59.120 45.455 0.00 0.00 0.00 3.41
868 1002 4.022589 CCAAGCACAACAATCTCACTGAAT 60.023 41.667 0.00 0.00 0.00 2.57
869 1003 5.152097 CAAGCACAACAATCTCACTGAATC 58.848 41.667 0.00 0.00 0.00 2.52
873 1007 4.155462 CACAACAATCTCACTGAATCCAGG 59.845 45.833 0.00 0.00 44.60 4.45
874 1008 4.042062 ACAACAATCTCACTGAATCCAGGA 59.958 41.667 0.00 0.00 44.60 3.86
876 1010 4.583871 ACAATCTCACTGAATCCAGGAAC 58.416 43.478 0.00 0.00 44.60 3.62
907 1056 0.108615 CAGGTCTGATCCGCGTTCTT 60.109 55.000 4.92 0.00 0.00 2.52
909 1058 1.140407 GGTCTGATCCGCGTTCTTCG 61.140 60.000 4.92 0.00 43.12 3.79
943 1106 0.473755 TCTTGCCTGCCTTGTCTTGA 59.526 50.000 0.00 0.00 0.00 3.02
948 1111 1.065564 GCCTGCCTTGTCTTGATCTCT 60.066 52.381 0.00 0.00 0.00 3.10
949 1112 2.617532 GCCTGCCTTGTCTTGATCTCTT 60.618 50.000 0.00 0.00 0.00 2.85
950 1113 3.269178 CCTGCCTTGTCTTGATCTCTTC 58.731 50.000 0.00 0.00 0.00 2.87
951 1114 3.055240 CCTGCCTTGTCTTGATCTCTTCT 60.055 47.826 0.00 0.00 0.00 2.85
964 1127 6.788598 TGATCTCTTCTGACTCTGCTATTT 57.211 37.500 0.00 0.00 0.00 1.40
965 1128 6.804677 TGATCTCTTCTGACTCTGCTATTTC 58.195 40.000 0.00 0.00 0.00 2.17
966 1129 6.606796 TGATCTCTTCTGACTCTGCTATTTCT 59.393 38.462 0.00 0.00 0.00 2.52
967 1130 6.206395 TCTCTTCTGACTCTGCTATTTCTG 57.794 41.667 0.00 0.00 0.00 3.02
968 1131 5.948758 TCTCTTCTGACTCTGCTATTTCTGA 59.051 40.000 0.00 0.00 0.00 3.27
969 1132 6.606796 TCTCTTCTGACTCTGCTATTTCTGAT 59.393 38.462 0.00 0.00 0.00 2.90
970 1133 6.804677 TCTTCTGACTCTGCTATTTCTGATC 58.195 40.000 0.00 0.00 0.00 2.92
971 1134 6.379417 TCTTCTGACTCTGCTATTTCTGATCA 59.621 38.462 0.00 0.00 0.00 2.92
972 1135 6.728089 TCTGACTCTGCTATTTCTGATCAT 57.272 37.500 0.00 0.00 0.00 2.45
973 1136 6.514063 TCTGACTCTGCTATTTCTGATCATG 58.486 40.000 0.00 0.00 0.00 3.07
974 1137 6.323225 TCTGACTCTGCTATTTCTGATCATGA 59.677 38.462 0.00 0.00 0.00 3.07
975 1138 6.279123 TGACTCTGCTATTTCTGATCATGAC 58.721 40.000 0.00 0.00 0.00 3.06
1026 3334 4.593864 GAGGATCCACGGAGCGCC 62.594 72.222 15.82 0.00 0.00 6.53
1081 3389 4.120331 GGATGCGCACCAAGGCAC 62.120 66.667 14.90 0.00 42.76 5.01
1134 3448 3.059982 CACGAGCTGGGGACAAGA 58.940 61.111 0.00 0.00 42.06 3.02
1167 3481 1.204146 ACTACCTGTGCCGGAATCAT 58.796 50.000 5.05 0.00 0.00 2.45
1170 3484 0.327924 ACCTGTGCCGGAATCATCAA 59.672 50.000 5.05 0.00 0.00 2.57
1173 3487 1.667724 CTGTGCCGGAATCATCAACTC 59.332 52.381 5.05 0.00 0.00 3.01
1197 3511 1.450312 CCCGCACTTCATGGAGGTC 60.450 63.158 5.84 0.00 0.00 3.85
1227 3541 1.627297 CCCCACAAGGCCTCTACCTC 61.627 65.000 5.23 0.00 39.93 3.85
1270 3584 5.039333 GCTACTGCAGCCTGATTTTTATTG 58.961 41.667 15.27 0.00 45.23 1.90
1305 3631 3.780294 TGTTGTAGGATGATGCCTTACCT 59.220 43.478 0.00 0.00 39.50 3.08
1375 3701 3.011517 AGACGGAAGGGCATGGCT 61.012 61.111 19.78 0.00 0.00 4.75
1404 3730 0.768221 TCCTGGTCCTGCAAGAGGTT 60.768 55.000 0.00 0.00 43.37 3.50
1410 3736 1.066071 GTCCTGCAAGAGGTTCCTACC 60.066 57.143 0.00 0.00 43.37 3.18
1621 6068 1.218585 CACTCAGAGCCTCTGCCAG 59.781 63.158 17.08 12.31 43.95 4.85
1641 6088 5.630121 CCAGTGCCAGGTATTAATTCCATA 58.370 41.667 13.04 0.00 0.00 2.74
1642 6089 6.248433 CCAGTGCCAGGTATTAATTCCATAT 58.752 40.000 13.04 0.00 0.00 1.78
1645 6092 7.120285 CAGTGCCAGGTATTAATTCCATATGAG 59.880 40.741 13.04 0.00 0.00 2.90
1667 6114 6.005583 AGTCATGAGCAACTGTAATTTGTG 57.994 37.500 0.00 0.00 0.00 3.33
1673 6120 4.620982 AGCAACTGTAATTTGTGCCTTTC 58.379 39.130 0.00 0.00 0.00 2.62
1674 6121 3.740832 GCAACTGTAATTTGTGCCTTTCC 59.259 43.478 0.00 0.00 0.00 3.13
1675 6123 4.739137 GCAACTGTAATTTGTGCCTTTCCA 60.739 41.667 0.00 0.00 0.00 3.53
1687 6136 1.269778 GCCTTTCCAAACTGCCACTTC 60.270 52.381 0.00 0.00 0.00 3.01
1694 6145 4.009675 TCCAAACTGCCACTTCATCATAC 58.990 43.478 0.00 0.00 0.00 2.39
1814 6265 1.753073 CCTGGATCATCAAACCAAGGC 59.247 52.381 0.00 0.00 33.14 4.35
1859 6316 2.903926 ACTCCTACAACTTACCCTGCT 58.096 47.619 0.00 0.00 0.00 4.24
1919 6418 0.041839 CAACAACTCGTGCTGCTGTC 60.042 55.000 0.00 0.00 0.00 3.51
1926 6425 2.243957 CGTGCTGCTGTCGTTCCAA 61.244 57.895 0.00 0.00 0.00 3.53
2009 6508 3.074281 TCCACCATTGGGGACGAC 58.926 61.111 6.49 0.00 44.11 4.34
2042 6541 0.249120 TACCACCACATTCAGGCTCG 59.751 55.000 0.00 0.00 0.00 5.03
2064 6563 2.359975 GCAACTCGTCCCCCAAGG 60.360 66.667 0.00 0.00 0.00 3.61
2144 6643 3.578272 GACGCGGCCACACAAACA 61.578 61.111 12.47 0.00 0.00 2.83
2157 6656 4.154015 CCACACAAACAGATGATAAAGCGA 59.846 41.667 0.00 0.00 0.00 4.93
2237 6742 0.974010 AAGGGCCGGAGATTGTCGTA 60.974 55.000 5.05 0.00 0.00 3.43
2240 6745 0.674534 GGCCGGAGATTGTCGTAGAT 59.325 55.000 5.05 0.00 40.67 1.98
2246 6751 3.315470 CGGAGATTGTCGTAGATGAGGAA 59.685 47.826 0.00 0.00 40.67 3.36
2247 6752 4.555708 CGGAGATTGTCGTAGATGAGGAAG 60.556 50.000 0.00 0.00 40.67 3.46
2248 6753 4.339814 GGAGATTGTCGTAGATGAGGAAGT 59.660 45.833 0.00 0.00 40.67 3.01
2261 6769 2.776659 GGAAGTATCCCGTTGCACC 58.223 57.895 0.00 0.00 40.10 5.01
2324 6832 1.524482 GACCCTGCAGTCCCTCATC 59.476 63.158 13.81 0.00 0.00 2.92
2387 6895 4.459089 GAGGACGACAGGGCTGCC 62.459 72.222 11.05 11.05 0.00 4.85
2510 7024 1.687494 GCTTGATGCAGACGTCGTCC 61.687 60.000 21.40 8.15 42.31 4.79
2545 7059 2.572284 GCAGCTCGAGTACCCGTT 59.428 61.111 15.13 0.00 0.00 4.44
2560 7074 1.734477 CGTTGTCTCCGGAGCTGTG 60.734 63.158 27.39 11.05 0.00 3.66
2672 7189 0.968405 AGGAAGGGTACGCACGTAAA 59.032 50.000 12.95 0.00 31.86 2.01
2741 7261 2.083774 TGCCTGCATACTTTTTCTCCG 58.916 47.619 0.00 0.00 0.00 4.63
2747 7267 6.872020 GCCTGCATACTTTTTCTCCGTATATA 59.128 38.462 0.00 0.00 0.00 0.86
2748 7268 7.549488 GCCTGCATACTTTTTCTCCGTATATAT 59.451 37.037 0.00 0.00 0.00 0.86
2749 7269 9.088512 CCTGCATACTTTTTCTCCGTATATATC 57.911 37.037 0.00 0.00 0.00 1.63
2750 7270 9.639601 CTGCATACTTTTTCTCCGTATATATCA 57.360 33.333 0.00 0.00 0.00 2.15
2766 7286 7.429630 CGTATATATCAATCCTGAAGCACGTAG 59.570 40.741 0.00 0.00 34.49 3.51
2788 7308 3.093574 CACGATTGCAGAGTTATTTGCG 58.906 45.455 0.00 0.00 43.13 4.85
2789 7309 3.000041 ACGATTGCAGAGTTATTTGCGA 59.000 40.909 0.00 0.00 43.13 5.10
2790 7310 3.435327 ACGATTGCAGAGTTATTTGCGAA 59.565 39.130 0.00 0.00 43.13 4.70
2844 7364 1.664649 CAACCTGTCGAGAAGCGCA 60.665 57.895 11.47 0.00 40.61 6.09
2862 7382 1.075425 CAAGCAAGAGGACGAGCGAG 61.075 60.000 0.00 0.00 0.00 5.03
2897 7417 0.182775 ACGGCCTCTTGTTCAAAGGT 59.817 50.000 0.00 0.00 32.49 3.50
2987 7672 0.956633 AGCAGTACGTCTGTTTCGGA 59.043 50.000 13.91 0.00 45.23 4.55
2998 7683 1.812571 CTGTTTCGGATTGGAACTGGG 59.187 52.381 0.00 0.00 0.00 4.45
2999 7684 0.526211 GTTTCGGATTGGAACTGGGC 59.474 55.000 0.00 0.00 0.00 5.36
3000 7685 0.111446 TTTCGGATTGGAACTGGGCA 59.889 50.000 0.00 0.00 0.00 5.36
3019 7704 2.741517 GCACAGCTCTTCTTCTTCTTCC 59.258 50.000 0.00 0.00 0.00 3.46
3021 7706 4.244862 CACAGCTCTTCTTCTTCTTCCTC 58.755 47.826 0.00 0.00 0.00 3.71
3023 7708 4.592778 ACAGCTCTTCTTCTTCTTCCTCTT 59.407 41.667 0.00 0.00 0.00 2.85
3029 7718 7.095229 GCTCTTCTTCTTCTTCCTCTTCTTTTC 60.095 40.741 0.00 0.00 0.00 2.29
3038 7727 8.581253 TTCTTCCTCTTCTTTTCTTTTCTTGT 57.419 30.769 0.00 0.00 0.00 3.16
3128 7831 5.530915 TCCTGATTCTTGTCGTTGTTTGAAT 59.469 36.000 0.00 0.00 0.00 2.57
3168 7871 4.344390 AGAATTATGGAACGGAGGGAGTAC 59.656 45.833 0.00 0.00 0.00 2.73
3285 7991 9.985318 ATAATGAAAATGTTGTTGTTGTTGTTG 57.015 25.926 0.00 0.00 0.00 3.33
3286 7992 6.851222 TGAAAATGTTGTTGTTGTTGTTGT 57.149 29.167 0.00 0.00 0.00 3.32
3287 7993 7.251704 TGAAAATGTTGTTGTTGTTGTTGTT 57.748 28.000 0.00 0.00 0.00 2.83
3288 7994 7.128331 TGAAAATGTTGTTGTTGTTGTTGTTG 58.872 30.769 0.00 0.00 0.00 3.33
3289 7995 6.610741 AAATGTTGTTGTTGTTGTTGTTGT 57.389 29.167 0.00 0.00 0.00 3.32
3290 7996 5.837586 ATGTTGTTGTTGTTGTTGTTGTC 57.162 34.783 0.00 0.00 0.00 3.18
3291 7997 3.731216 TGTTGTTGTTGTTGTTGTTGTCG 59.269 39.130 0.00 0.00 0.00 4.35
3292 7998 3.627732 TGTTGTTGTTGTTGTTGTCGT 57.372 38.095 0.00 0.00 0.00 4.34
3293 7999 3.556513 TGTTGTTGTTGTTGTTGTCGTC 58.443 40.909 0.00 0.00 0.00 4.20
3296 8002 2.159814 TGTTGTTGTTGTTGTCGTCGTC 60.160 45.455 0.00 0.00 0.00 4.20
3299 8005 0.915904 TTGTTGTTGTCGTCGTCGTC 59.084 50.000 1.33 0.00 38.33 4.20
3311 8390 2.036168 CGTCGTCGTCGTACTAGTAGTG 60.036 54.545 13.29 0.00 38.33 2.74
3379 8470 8.634444 CGTCTAGTTAGTTACTACTCCTACCTA 58.366 40.741 0.00 0.00 38.33 3.08
3395 8486 6.254522 TCCTACCTATCTCCTTGGCTAATAC 58.745 44.000 0.00 0.00 0.00 1.89
3396 8487 6.046881 TCCTACCTATCTCCTTGGCTAATACT 59.953 42.308 0.00 0.00 0.00 2.12
3397 8488 6.153680 CCTACCTATCTCCTTGGCTAATACTG 59.846 46.154 0.00 0.00 0.00 2.74
3398 8489 5.468658 ACCTATCTCCTTGGCTAATACTGT 58.531 41.667 0.00 0.00 0.00 3.55
3399 8490 5.305644 ACCTATCTCCTTGGCTAATACTGTG 59.694 44.000 0.00 0.00 0.00 3.66
3438 8566 2.813754 TGGAGTACAAATGCAAGCTGAC 59.186 45.455 0.00 0.00 0.00 3.51
3439 8567 2.162408 GGAGTACAAATGCAAGCTGACC 59.838 50.000 0.00 0.00 0.00 4.02
3440 8568 1.806542 AGTACAAATGCAAGCTGACCG 59.193 47.619 0.00 0.00 0.00 4.79
3441 8569 1.804151 GTACAAATGCAAGCTGACCGA 59.196 47.619 0.00 0.00 0.00 4.69
3454 8582 2.360483 GCTGACCGAGATTCAGATCTGA 59.640 50.000 21.67 21.67 42.66 3.27
3455 8583 3.005684 GCTGACCGAGATTCAGATCTGAT 59.994 47.826 25.64 15.44 42.66 2.90
3456 8584 4.548494 CTGACCGAGATTCAGATCTGATG 58.452 47.826 25.64 12.89 42.66 3.07
3459 8587 2.036862 CCGAGATTCAGATCTGATGGCA 59.963 50.000 25.64 11.64 42.66 4.92
3496 8628 4.647424 ACTCACTGTATTAGAGCAGAGC 57.353 45.455 9.46 0.00 36.62 4.09
3497 8629 4.019858 ACTCACTGTATTAGAGCAGAGCA 58.980 43.478 9.46 0.00 36.62 4.26
3498 8630 4.097741 ACTCACTGTATTAGAGCAGAGCAG 59.902 45.833 9.46 0.00 36.62 4.24
3505 8637 1.102154 TAGAGCAGAGCAGAGCAGTC 58.898 55.000 0.00 0.00 0.00 3.51
3530 8662 0.455005 GTCTACTCCACCGCTACCAC 59.545 60.000 0.00 0.00 0.00 4.16
3534 8666 1.982395 CTCCACCGCTACCACCAGA 60.982 63.158 0.00 0.00 0.00 3.86
3535 8667 1.305802 TCCACCGCTACCACCAGAT 60.306 57.895 0.00 0.00 0.00 2.90
3536 8668 1.144057 CCACCGCTACCACCAGATC 59.856 63.158 0.00 0.00 0.00 2.75
3537 8669 1.226974 CACCGCTACCACCAGATCG 60.227 63.158 0.00 0.00 0.00 3.69
3547 8679 2.821366 CCAGATCGGTGTGGCAGC 60.821 66.667 0.00 0.00 31.30 5.25
3581 8725 1.663643 CATACGTGCACATGTACCACC 59.336 52.381 18.64 6.00 35.82 4.61
3582 8726 0.037139 TACGTGCACATGTACCACCC 60.037 55.000 18.64 1.48 0.00 4.61
3583 8727 1.302112 CGTGCACATGTACCACCCA 60.302 57.895 18.64 0.54 0.00 4.51
3584 8728 1.298157 CGTGCACATGTACCACCCAG 61.298 60.000 18.64 5.84 0.00 4.45
3585 8729 0.250727 GTGCACATGTACCACCCAGT 60.251 55.000 13.17 0.00 0.00 4.00
3587 8731 1.277842 TGCACATGTACCACCCAGTAG 59.722 52.381 0.00 0.00 0.00 2.57
3594 8738 2.582172 TGTACCACCCAGTAGCTAGGTA 59.418 50.000 3.00 3.41 30.98 3.08
3624 8769 8.578308 CGTATACGTTGATGGGATAAACTAAA 57.422 34.615 17.16 0.00 34.11 1.85
3625 8770 8.697067 CGTATACGTTGATGGGATAAACTAAAG 58.303 37.037 17.16 0.00 34.11 1.85
3627 8772 6.980051 ACGTTGATGGGATAAACTAAAGAC 57.020 37.500 0.00 0.00 0.00 3.01
3628 8773 5.579511 ACGTTGATGGGATAAACTAAAGACG 59.420 40.000 0.00 0.00 0.00 4.18
3629 8774 5.501897 CGTTGATGGGATAAACTAAAGACGC 60.502 44.000 0.00 0.00 0.00 5.19
3632 8976 6.278363 TGATGGGATAAACTAAAGACGCTAC 58.722 40.000 0.00 0.00 0.00 3.58
3634 8978 5.657474 TGGGATAAACTAAAGACGCTACAG 58.343 41.667 0.00 0.00 0.00 2.74
3669 9013 5.830912 TGAAAAGAAAACTGCATGACGAAT 58.169 33.333 0.00 0.00 0.00 3.34
3682 9026 5.406477 TGCATGACGAATCTAGTGATATTGC 59.594 40.000 0.00 0.00 31.70 3.56
3683 9027 5.406477 GCATGACGAATCTAGTGATATTGCA 59.594 40.000 0.00 0.00 31.70 4.08
3684 9028 6.073602 GCATGACGAATCTAGTGATATTGCAA 60.074 38.462 0.00 0.00 31.70 4.08
3685 9029 6.828502 TGACGAATCTAGTGATATTGCAAC 57.171 37.500 0.00 0.00 31.70 4.17
3688 9032 7.222805 TGACGAATCTAGTGATATTGCAACTTC 59.777 37.037 0.00 2.00 31.70 3.01
3689 9033 6.199154 ACGAATCTAGTGATATTGCAACTTCG 59.801 38.462 0.00 3.58 31.70 3.79
3690 9034 6.346120 CGAATCTAGTGATATTGCAACTTCGG 60.346 42.308 0.00 0.00 31.70 4.30
3691 9035 5.592104 TCTAGTGATATTGCAACTTCGGA 57.408 39.130 0.00 0.00 0.00 4.55
3694 9038 5.741388 AGTGATATTGCAACTTCGGATTC 57.259 39.130 0.00 0.00 0.00 2.52
3695 9039 4.271049 AGTGATATTGCAACTTCGGATTCG 59.729 41.667 0.00 0.00 37.82 3.34
3696 9040 3.559655 TGATATTGCAACTTCGGATTCGG 59.440 43.478 0.00 0.00 36.95 4.30
3697 9041 2.107950 ATTGCAACTTCGGATTCGGA 57.892 45.000 0.00 0.00 36.95 4.55
3698 9042 2.107950 TTGCAACTTCGGATTCGGAT 57.892 45.000 0.00 0.00 36.95 4.18
3699 9043 1.368641 TGCAACTTCGGATTCGGATG 58.631 50.000 0.00 5.81 36.95 3.51
3700 9044 0.657840 GCAACTTCGGATTCGGATGG 59.342 55.000 0.00 3.74 36.95 3.51
3701 9045 1.299541 CAACTTCGGATTCGGATGGG 58.700 55.000 0.00 1.85 36.95 4.00
3703 9047 1.598130 CTTCGGATTCGGATGGGGC 60.598 63.158 0.00 0.00 36.95 5.80
3704 9048 3.114825 TTCGGATTCGGATGGGGCC 62.115 63.158 0.00 0.00 36.95 5.80
3706 9050 2.600731 GGATTCGGATGGGGCCAA 59.399 61.111 4.39 0.00 0.00 4.52
3707 9051 1.076339 GGATTCGGATGGGGCCAAA 60.076 57.895 4.39 0.00 0.00 3.28
3708 9052 0.686112 GGATTCGGATGGGGCCAAAA 60.686 55.000 4.39 0.00 0.00 2.44
3709 9053 1.190643 GATTCGGATGGGGCCAAAAA 58.809 50.000 4.39 0.00 0.00 1.94
3710 9054 0.901827 ATTCGGATGGGGCCAAAAAC 59.098 50.000 4.39 0.00 0.00 2.43
3711 9055 1.528292 TTCGGATGGGGCCAAAAACG 61.528 55.000 4.39 3.21 0.00 3.60
3712 9056 1.974343 CGGATGGGGCCAAAAACGA 60.974 57.895 4.39 0.00 0.00 3.85
3713 9057 1.890174 GGATGGGGCCAAAAACGAG 59.110 57.895 4.39 0.00 0.00 4.18
3714 9058 1.215382 GATGGGGCCAAAAACGAGC 59.785 57.895 4.39 0.00 0.00 5.03
3715 9059 2.542211 GATGGGGCCAAAAACGAGCG 62.542 60.000 4.39 0.00 0.00 5.03
3716 9060 4.050934 GGGGCCAAAAACGAGCGG 62.051 66.667 4.39 0.00 0.00 5.52
3717 9061 3.292159 GGGCCAAAAACGAGCGGT 61.292 61.111 4.39 0.00 0.00 5.68
3720 9064 0.311477 GGCCAAAAACGAGCGGTAAA 59.689 50.000 0.00 0.00 0.00 2.01
3722 9066 2.247637 GCCAAAAACGAGCGGTAAATC 58.752 47.619 0.00 0.00 0.00 2.17
3723 9067 2.350964 GCCAAAAACGAGCGGTAAATCA 60.351 45.455 0.00 0.00 0.00 2.57
3724 9068 3.231160 CCAAAAACGAGCGGTAAATCAC 58.769 45.455 0.00 0.00 0.00 3.06
3727 9071 5.313623 CAAAAACGAGCGGTAAATCACTAG 58.686 41.667 0.00 0.00 0.00 2.57
3728 9072 2.865343 ACGAGCGGTAAATCACTAGG 57.135 50.000 0.00 0.00 0.00 3.02
3729 9073 1.202382 ACGAGCGGTAAATCACTAGGC 60.202 52.381 0.00 0.00 0.00 3.93
3731 9075 0.468648 AGCGGTAAATCACTAGGCCC 59.531 55.000 0.00 0.00 0.00 5.80
3735 9079 2.093128 CGGTAAATCACTAGGCCCTGTT 60.093 50.000 0.00 0.00 0.00 3.16
3737 9081 4.341487 GGTAAATCACTAGGCCCTGTTTT 58.659 43.478 0.00 3.22 0.00 2.43
3738 9082 4.157840 GGTAAATCACTAGGCCCTGTTTTG 59.842 45.833 0.00 0.00 0.00 2.44
3739 9083 3.525800 AATCACTAGGCCCTGTTTTGT 57.474 42.857 0.00 0.00 0.00 2.83
3740 9084 3.525800 ATCACTAGGCCCTGTTTTGTT 57.474 42.857 0.00 0.00 0.00 2.83
3742 9086 2.955660 TCACTAGGCCCTGTTTTGTTTG 59.044 45.455 0.00 0.00 0.00 2.93
3744 9088 1.618343 CTAGGCCCTGTTTTGTTTGGG 59.382 52.381 0.00 0.00 42.41 4.12
3749 9093 2.997980 CCCTGTTTTGTTTGGGCTTTT 58.002 42.857 0.00 0.00 32.49 2.27
3750 9094 2.682352 CCCTGTTTTGTTTGGGCTTTTG 59.318 45.455 0.00 0.00 32.49 2.44
3751 9095 2.097304 CCTGTTTTGTTTGGGCTTTTGC 59.903 45.455 0.00 0.00 46.64 3.68
3752 9096 3.009026 CTGTTTTGTTTGGGCTTTTGCT 58.991 40.909 0.00 0.00 46.54 3.91
3753 9097 3.416156 TGTTTTGTTTGGGCTTTTGCTT 58.584 36.364 0.00 0.00 46.54 3.91
3754 9098 3.438434 TGTTTTGTTTGGGCTTTTGCTTC 59.562 39.130 0.00 0.00 46.54 3.86
3755 9099 1.933247 TTGTTTGGGCTTTTGCTTCG 58.067 45.000 0.00 0.00 46.54 3.79
3756 9100 0.103937 TGTTTGGGCTTTTGCTTCGG 59.896 50.000 0.00 0.00 46.54 4.30
3757 9101 1.068921 TTTGGGCTTTTGCTTCGGC 59.931 52.632 0.00 0.00 46.54 5.54
3758 9102 1.398958 TTTGGGCTTTTGCTTCGGCT 61.399 50.000 0.00 0.00 46.54 5.52
3759 9103 1.398958 TTGGGCTTTTGCTTCGGCTT 61.399 50.000 0.00 0.00 46.54 4.35
3760 9104 1.367471 GGGCTTTTGCTTCGGCTTT 59.633 52.632 0.00 0.00 46.54 3.51
3762 9106 0.861185 GGCTTTTGCTTCGGCTTTTG 59.139 50.000 0.00 0.00 46.54 2.44
3763 9107 0.233074 GCTTTTGCTTCGGCTTTTGC 59.767 50.000 0.00 0.00 43.34 3.68
3764 9108 2.398406 GCTTTTGCTTCGGCTTTTGCA 61.398 47.619 0.00 0.00 44.86 4.08
3765 9109 4.234801 GCTTTTGCTTCGGCTTTTGCAG 62.235 50.000 0.00 0.00 44.86 4.41
3773 9117 4.085876 GCTTTTGCAGCTCCCAGA 57.914 55.556 0.00 0.00 46.27 3.86
3774 9118 2.576298 GCTTTTGCAGCTCCCAGAT 58.424 52.632 0.00 0.00 46.27 2.90
3775 9119 0.172803 GCTTTTGCAGCTCCCAGATG 59.827 55.000 0.00 0.00 46.27 2.90
3782 9126 2.617736 AGCTCCCAGATGCTGATGT 58.382 52.632 0.00 0.00 38.21 3.06
3797 9141 2.351726 CTGATGTAGCCCGTAACAAAGC 59.648 50.000 0.00 0.00 0.00 3.51
3799 9143 2.483014 TGTAGCCCGTAACAAAGCAT 57.517 45.000 0.00 0.00 0.00 3.79
3802 9146 3.685756 TGTAGCCCGTAACAAAGCATAAC 59.314 43.478 0.00 0.00 0.00 1.89
3803 9147 2.089201 AGCCCGTAACAAAGCATAACC 58.911 47.619 0.00 0.00 0.00 2.85
3804 9148 1.813786 GCCCGTAACAAAGCATAACCA 59.186 47.619 0.00 0.00 0.00 3.67
3835 9185 5.221461 ACGGGCAATTTTGGTTGTAACATAA 60.221 36.000 0.00 0.00 0.00 1.90
3836 9186 5.347364 CGGGCAATTTTGGTTGTAACATAAG 59.653 40.000 0.00 0.00 0.00 1.73
3837 9187 6.459923 GGGCAATTTTGGTTGTAACATAAGA 58.540 36.000 0.00 0.00 0.00 2.10
3842 9192 9.810231 CAATTTTGGTTGTAACATAAGAAATGC 57.190 29.630 0.00 0.00 0.00 3.56
3843 9193 7.954788 TTTTGGTTGTAACATAAGAAATGCC 57.045 32.000 0.00 0.00 0.00 4.40
3844 9194 6.656632 TTGGTTGTAACATAAGAAATGCCA 57.343 33.333 0.00 0.00 0.00 4.92
3845 9195 6.019779 TGGTTGTAACATAAGAAATGCCAC 57.980 37.500 0.00 0.00 0.00 5.01
3846 9196 5.772672 TGGTTGTAACATAAGAAATGCCACT 59.227 36.000 0.00 0.00 0.00 4.00
3847 9197 6.072175 TGGTTGTAACATAAGAAATGCCACTC 60.072 38.462 0.00 0.00 0.00 3.51
3849 9199 6.985188 TGTAACATAAGAAATGCCACTCTC 57.015 37.500 0.00 0.00 0.00 3.20
3850 9200 6.711277 TGTAACATAAGAAATGCCACTCTCT 58.289 36.000 0.00 0.00 0.00 3.10
3851 9201 6.818644 TGTAACATAAGAAATGCCACTCTCTC 59.181 38.462 0.00 0.00 0.00 3.20
3852 9202 4.437239 ACATAAGAAATGCCACTCTCTCG 58.563 43.478 0.00 0.00 0.00 4.04
3853 9203 4.160439 ACATAAGAAATGCCACTCTCTCGA 59.840 41.667 0.00 0.00 0.00 4.04
3865 9235 4.972201 CACTCTCTCGACTAGTGGTAAAC 58.028 47.826 0.00 0.00 37.55 2.01
3866 9236 4.696402 CACTCTCTCGACTAGTGGTAAACT 59.304 45.833 0.00 0.00 43.40 2.66
3917 9288 9.680946 CAAAACAAAACAAAACAAAACAAAAGG 57.319 25.926 0.00 0.00 0.00 3.11
3918 9289 7.456684 AACAAAACAAAACAAAACAAAAGGC 57.543 28.000 0.00 0.00 0.00 4.35
3919 9290 6.564328 ACAAAACAAAACAAAACAAAAGGCA 58.436 28.000 0.00 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 4.683832 ACATGAGCGACTAATAAGGTGAC 58.316 43.478 0.00 0.00 0.00 3.67
36 37 4.645136 AGACATGAGCGACTAATAAGGTGA 59.355 41.667 0.00 0.00 0.00 4.02
37 38 4.742167 CAGACATGAGCGACTAATAAGGTG 59.258 45.833 0.00 0.00 0.00 4.00
38 39 4.737946 GCAGACATGAGCGACTAATAAGGT 60.738 45.833 0.00 0.00 0.00 3.50
40 41 4.615949 AGCAGACATGAGCGACTAATAAG 58.384 43.478 0.00 0.00 35.48 1.73
41 42 4.339530 AGAGCAGACATGAGCGACTAATAA 59.660 41.667 0.00 0.00 35.48 1.40
42 43 3.885901 AGAGCAGACATGAGCGACTAATA 59.114 43.478 0.00 0.00 35.48 0.98
43 44 2.692557 AGAGCAGACATGAGCGACTAAT 59.307 45.455 0.00 0.00 35.48 1.73
45 46 1.403323 CAGAGCAGACATGAGCGACTA 59.597 52.381 0.00 0.00 35.48 2.59
49 50 0.101939 TAGCAGAGCAGACATGAGCG 59.898 55.000 0.00 0.00 35.48 5.03
85 86 6.444171 ACTTCCTAGCATCTTATATTACCCCC 59.556 42.308 0.00 0.00 0.00 5.40
86 87 7.497773 ACTTCCTAGCATCTTATATTACCCC 57.502 40.000 0.00 0.00 0.00 4.95
156 157 3.343617 CTCCTGCTATTCCCGTCAAAAA 58.656 45.455 0.00 0.00 0.00 1.94
157 158 2.939640 GCTCCTGCTATTCCCGTCAAAA 60.940 50.000 0.00 0.00 36.03 2.44
158 159 1.406887 GCTCCTGCTATTCCCGTCAAA 60.407 52.381 0.00 0.00 36.03 2.69
159 160 0.178068 GCTCCTGCTATTCCCGTCAA 59.822 55.000 0.00 0.00 36.03 3.18
160 161 1.823295 GCTCCTGCTATTCCCGTCA 59.177 57.895 0.00 0.00 36.03 4.35
161 162 4.760757 GCTCCTGCTATTCCCGTC 57.239 61.111 0.00 0.00 36.03 4.79
172 173 3.588336 GCAAAGGCAGAGCTCCTG 58.412 61.111 10.93 9.35 45.67 3.86
182 183 6.540189 TGTCTTCTCTTCTATAATGCAAAGGC 59.460 38.462 0.00 0.00 41.68 4.35
183 184 8.674263 ATGTCTTCTCTTCTATAATGCAAAGG 57.326 34.615 0.00 0.00 0.00 3.11
187 188 9.579932 TCTCTATGTCTTCTCTTCTATAATGCA 57.420 33.333 0.00 0.00 0.00 3.96
192 193 9.058174 CCGTTTCTCTATGTCTTCTCTTCTATA 57.942 37.037 0.00 0.00 0.00 1.31
193 194 7.776030 TCCGTTTCTCTATGTCTTCTCTTCTAT 59.224 37.037 0.00 0.00 0.00 1.98
194 195 7.110810 TCCGTTTCTCTATGTCTTCTCTTCTA 58.889 38.462 0.00 0.00 0.00 2.10
195 196 5.946972 TCCGTTTCTCTATGTCTTCTCTTCT 59.053 40.000 0.00 0.00 0.00 2.85
196 197 6.197364 TCCGTTTCTCTATGTCTTCTCTTC 57.803 41.667 0.00 0.00 0.00 2.87
197 198 6.406400 CCATCCGTTTCTCTATGTCTTCTCTT 60.406 42.308 0.00 0.00 0.00 2.85
198 199 5.068460 CCATCCGTTTCTCTATGTCTTCTCT 59.932 44.000 0.00 0.00 0.00 3.10
199 200 5.067936 TCCATCCGTTTCTCTATGTCTTCTC 59.932 44.000 0.00 0.00 0.00 2.87
200 201 4.956700 TCCATCCGTTTCTCTATGTCTTCT 59.043 41.667 0.00 0.00 0.00 2.85
201 202 5.044558 GTCCATCCGTTTCTCTATGTCTTC 58.955 45.833 0.00 0.00 0.00 2.87
202 203 4.141914 GGTCCATCCGTTTCTCTATGTCTT 60.142 45.833 0.00 0.00 0.00 3.01
203 204 3.385111 GGTCCATCCGTTTCTCTATGTCT 59.615 47.826 0.00 0.00 0.00 3.41
204 205 3.132289 TGGTCCATCCGTTTCTCTATGTC 59.868 47.826 0.00 0.00 39.52 3.06
205 206 3.104512 TGGTCCATCCGTTTCTCTATGT 58.895 45.455 0.00 0.00 39.52 2.29
206 207 3.819564 TGGTCCATCCGTTTCTCTATG 57.180 47.619 0.00 0.00 39.52 2.23
207 208 3.430374 CGTTGGTCCATCCGTTTCTCTAT 60.430 47.826 0.00 0.00 39.52 1.98
208 209 2.094390 CGTTGGTCCATCCGTTTCTCTA 60.094 50.000 0.00 0.00 39.52 2.43
209 210 1.337823 CGTTGGTCCATCCGTTTCTCT 60.338 52.381 0.00 0.00 39.52 3.10
210 211 1.076332 CGTTGGTCCATCCGTTTCTC 58.924 55.000 0.00 0.00 39.52 2.87
211 212 0.682852 TCGTTGGTCCATCCGTTTCT 59.317 50.000 10.30 0.00 39.52 2.52
212 213 1.076332 CTCGTTGGTCCATCCGTTTC 58.924 55.000 10.30 0.00 39.52 2.78
213 214 0.682852 TCTCGTTGGTCCATCCGTTT 59.317 50.000 10.30 0.00 39.52 3.60
214 215 0.246635 CTCTCGTTGGTCCATCCGTT 59.753 55.000 10.30 0.00 39.52 4.44
215 216 1.605058 CCTCTCGTTGGTCCATCCGT 61.605 60.000 10.30 0.00 39.52 4.69
216 217 1.141881 CCTCTCGTTGGTCCATCCG 59.858 63.158 0.00 0.00 39.52 4.18
217 218 0.461961 CTCCTCTCGTTGGTCCATCC 59.538 60.000 0.00 0.00 0.00 3.51
218 219 0.179097 GCTCCTCTCGTTGGTCCATC 60.179 60.000 0.00 0.00 0.00 3.51
219 220 0.616111 AGCTCCTCTCGTTGGTCCAT 60.616 55.000 0.00 0.00 0.00 3.41
220 221 1.228894 AGCTCCTCTCGTTGGTCCA 60.229 57.895 0.00 0.00 0.00 4.02
221 222 1.216710 CAGCTCCTCTCGTTGGTCC 59.783 63.158 0.00 0.00 0.00 4.46
222 223 1.446966 GCAGCTCCTCTCGTTGGTC 60.447 63.158 0.00 0.00 0.00 4.02
223 224 1.882989 GAGCAGCTCCTCTCGTTGGT 61.883 60.000 11.84 0.00 0.00 3.67
224 225 1.153667 GAGCAGCTCCTCTCGTTGG 60.154 63.158 11.84 0.00 0.00 3.77
225 226 0.175302 ATGAGCAGCTCCTCTCGTTG 59.825 55.000 20.16 0.00 33.02 4.10
226 227 0.901124 AATGAGCAGCTCCTCTCGTT 59.099 50.000 20.16 7.40 34.67 3.85
227 228 0.901124 AAATGAGCAGCTCCTCTCGT 59.099 50.000 20.16 1.36 33.02 4.18
228 229 2.879002 TAAATGAGCAGCTCCTCTCG 57.121 50.000 20.16 0.00 33.02 4.04
229 230 4.064388 GGAATAAATGAGCAGCTCCTCTC 58.936 47.826 20.16 7.56 33.02 3.20
230 231 3.457380 TGGAATAAATGAGCAGCTCCTCT 59.543 43.478 20.16 6.23 33.02 3.69
231 232 3.813443 TGGAATAAATGAGCAGCTCCTC 58.187 45.455 20.16 0.00 0.00 3.71
236 237 7.211966 ACATTATCTGGAATAAATGAGCAGC 57.788 36.000 0.00 0.00 0.00 5.25
262 263 5.181690 TGATTTAGCACAACACAAACCTC 57.818 39.130 0.00 0.00 0.00 3.85
263 264 5.451798 CCTTGATTTAGCACAACACAAACCT 60.452 40.000 0.00 0.00 0.00 3.50
264 265 4.744631 CCTTGATTTAGCACAACACAAACC 59.255 41.667 0.00 0.00 0.00 3.27
266 267 5.843673 TCCTTGATTTAGCACAACACAAA 57.156 34.783 0.00 0.00 0.00 2.83
269 270 5.376854 ACATCCTTGATTTAGCACAACAC 57.623 39.130 0.00 0.00 0.00 3.32
274 275 6.073331 GCTGAGATACATCCTTGATTTAGCAC 60.073 42.308 0.00 0.00 0.00 4.40
278 279 7.609097 AGAGCTGAGATACATCCTTGATTTA 57.391 36.000 0.00 0.00 0.00 1.40
284 285 4.837298 TGCATAGAGCTGAGATACATCCTT 59.163 41.667 0.00 0.00 45.94 3.36
290 291 3.441922 TCGGATGCATAGAGCTGAGATAC 59.558 47.826 0.00 0.00 45.94 2.24
293 294 1.986882 TCGGATGCATAGAGCTGAGA 58.013 50.000 0.00 0.00 45.94 3.27
299 300 9.208022 TGTATAAAGAAATTCGGATGCATAGAG 57.792 33.333 0.00 0.00 0.00 2.43
321 388 8.036575 CCAATCAAGTGACAAATTTGGATGTAT 58.963 33.333 21.74 0.00 33.31 2.29
323 390 6.041865 TCCAATCAAGTGACAAATTTGGATGT 59.958 34.615 21.74 1.35 34.86 3.06
335 402 8.816640 ACACATAAATTTTCCAATCAAGTGAC 57.183 30.769 0.00 0.00 0.00 3.67
342 409 8.647226 GTGCAGTTACACATAAATTTTCCAATC 58.353 33.333 0.00 0.00 40.40 2.67
357 424 3.243771 ACTCACCACTAGTGCAGTTACAC 60.244 47.826 17.86 0.00 46.81 2.90
358 425 2.963101 ACTCACCACTAGTGCAGTTACA 59.037 45.455 17.86 0.00 46.81 2.41
361 428 3.832490 TCATACTCACCACTAGTGCAGTT 59.168 43.478 17.86 2.73 46.81 3.16
365 432 4.081642 TCCTTTCATACTCACCACTAGTGC 60.082 45.833 17.86 0.00 46.81 4.40
374 450 9.530633 ACGTAAGATAATTCCTTTCATACTCAC 57.469 33.333 0.00 0.00 43.62 3.51
399 475 6.925211 TGGAGCTAGCTGATACAATATACAC 58.075 40.000 24.99 1.48 0.00 2.90
405 481 3.070734 CACCTGGAGCTAGCTGATACAAT 59.929 47.826 24.99 4.24 0.00 2.71
406 482 2.432146 CACCTGGAGCTAGCTGATACAA 59.568 50.000 24.99 0.00 0.00 2.41
408 484 2.295909 CTCACCTGGAGCTAGCTGATAC 59.704 54.545 24.99 7.36 36.69 2.24
410 486 1.412079 CTCACCTGGAGCTAGCTGAT 58.588 55.000 24.99 0.00 36.69 2.90
411 487 0.685785 CCTCACCTGGAGCTAGCTGA 60.686 60.000 24.99 11.98 42.62 4.26
413 489 1.382420 CCCTCACCTGGAGCTAGCT 60.382 63.158 19.45 19.45 42.62 3.32
414 490 2.439104 CCCCTCACCTGGAGCTAGC 61.439 68.421 6.62 6.62 42.62 3.42
415 491 0.325671 TTCCCCTCACCTGGAGCTAG 60.326 60.000 0.00 0.00 42.62 3.42
416 492 0.343372 ATTCCCCTCACCTGGAGCTA 59.657 55.000 0.00 0.00 42.62 3.32
417 493 0.985490 GATTCCCCTCACCTGGAGCT 60.985 60.000 0.00 0.00 42.62 4.09
427 503 3.956848 CCCTCTTTGATTTGATTCCCCTC 59.043 47.826 0.00 0.00 0.00 4.30
429 505 2.432146 GCCCTCTTTGATTTGATTCCCC 59.568 50.000 0.00 0.00 0.00 4.81
490 573 2.353610 CCCCCATGCTTGCTTCCAC 61.354 63.158 0.00 0.00 0.00 4.02
504 587 0.335019 AGCCTTTTCCACATACCCCC 59.665 55.000 0.00 0.00 0.00 5.40
505 588 1.005450 TCAGCCTTTTCCACATACCCC 59.995 52.381 0.00 0.00 0.00 4.95
506 589 2.507407 TCAGCCTTTTCCACATACCC 57.493 50.000 0.00 0.00 0.00 3.69
520 605 2.269978 TGCCTTTGCATCTTCAGCC 58.730 52.632 0.00 0.00 44.23 4.85
544 629 2.224646 ACCTTTCCTCTTTCCTGAGCAC 60.225 50.000 0.00 0.00 33.02 4.40
545 630 2.057922 ACCTTTCCTCTTTCCTGAGCA 58.942 47.619 0.00 0.00 33.02 4.26
557 649 1.538687 GCAATGCAGCCACCTTTCCT 61.539 55.000 0.00 0.00 0.00 3.36
558 650 1.079612 GCAATGCAGCCACCTTTCC 60.080 57.895 0.00 0.00 0.00 3.13
570 662 4.439305 TCACTTTTACTCCATGCAATGC 57.561 40.909 0.00 0.00 44.97 3.56
596 709 1.606668 GTGAGATTTGGTTCGTTGGCA 59.393 47.619 0.00 0.00 0.00 4.92
597 710 1.880027 AGTGAGATTTGGTTCGTTGGC 59.120 47.619 0.00 0.00 0.00 4.52
598 711 3.058914 GTGAGTGAGATTTGGTTCGTTGG 60.059 47.826 0.00 0.00 0.00 3.77
599 712 3.809832 AGTGAGTGAGATTTGGTTCGTTG 59.190 43.478 0.00 0.00 0.00 4.10
603 716 4.636249 AGTGAGTGAGTGAGATTTGGTTC 58.364 43.478 0.00 0.00 0.00 3.62
606 719 3.993081 GTGAGTGAGTGAGTGAGATTTGG 59.007 47.826 0.00 0.00 0.00 3.28
637 750 0.107557 GGTATTGGTGTACGTGGGGG 60.108 60.000 0.00 0.00 0.00 5.40
638 751 0.107557 GGGTATTGGTGTACGTGGGG 60.108 60.000 0.00 0.00 0.00 4.96
639 752 0.614294 TGGGTATTGGTGTACGTGGG 59.386 55.000 0.00 0.00 0.00 4.61
641 754 1.338294 TGCTGGGTATTGGTGTACGTG 60.338 52.381 0.00 0.00 0.00 4.49
642 755 0.978151 TGCTGGGTATTGGTGTACGT 59.022 50.000 0.00 0.00 0.00 3.57
643 756 1.206132 TCTGCTGGGTATTGGTGTACG 59.794 52.381 0.00 0.00 0.00 3.67
645 758 1.209504 GCTCTGCTGGGTATTGGTGTA 59.790 52.381 0.00 0.00 0.00 2.90
647 760 0.035152 TGCTCTGCTGGGTATTGGTG 60.035 55.000 0.00 0.00 0.00 4.17
649 762 1.340405 ACTTGCTCTGCTGGGTATTGG 60.340 52.381 0.00 0.00 0.00 3.16
651 764 1.065126 GGACTTGCTCTGCTGGGTATT 60.065 52.381 0.00 0.00 0.00 1.89
652 765 0.543749 GGACTTGCTCTGCTGGGTAT 59.456 55.000 0.00 0.00 0.00 2.73
653 766 0.835971 TGGACTTGCTCTGCTGGGTA 60.836 55.000 0.00 0.00 0.00 3.69
654 767 1.708993 TTGGACTTGCTCTGCTGGGT 61.709 55.000 0.00 0.00 0.00 4.51
655 768 0.959372 CTTGGACTTGCTCTGCTGGG 60.959 60.000 0.00 0.00 0.00 4.45
656 769 0.250640 ACTTGGACTTGCTCTGCTGG 60.251 55.000 0.00 0.00 0.00 4.85
657 770 0.873054 CACTTGGACTTGCTCTGCTG 59.127 55.000 0.00 0.00 0.00 4.41
658 771 0.471617 ACACTTGGACTTGCTCTGCT 59.528 50.000 0.00 0.00 0.00 4.24
659 772 1.801178 GTACACTTGGACTTGCTCTGC 59.199 52.381 0.00 0.00 0.00 4.26
660 773 3.062763 CAGTACACTTGGACTTGCTCTG 58.937 50.000 0.00 0.00 0.00 3.35
661 774 2.700897 ACAGTACACTTGGACTTGCTCT 59.299 45.455 0.00 0.00 0.00 4.09
662 775 2.802816 CACAGTACACTTGGACTTGCTC 59.197 50.000 0.00 0.00 0.00 4.26
674 787 1.553248 TGTAGGATGGCCACAGTACAC 59.447 52.381 8.16 1.95 36.29 2.90
764 877 1.272760 GGAGGAGGAGAGGAGTGTTGA 60.273 57.143 0.00 0.00 0.00 3.18
783 896 4.162509 CCTTTTGTAAGTAGGAGGAGGAGG 59.837 50.000 0.00 0.00 0.00 4.30
785 898 4.101856 CCCTTTTGTAAGTAGGAGGAGGA 58.898 47.826 0.00 0.00 0.00 3.71
786 899 3.370633 GCCCTTTTGTAAGTAGGAGGAGG 60.371 52.174 0.00 0.00 0.00 4.30
787 900 3.519913 AGCCCTTTTGTAAGTAGGAGGAG 59.480 47.826 0.00 0.00 0.00 3.69
788 901 3.518303 GAGCCCTTTTGTAAGTAGGAGGA 59.482 47.826 0.00 0.00 0.00 3.71
790 903 3.522553 CGAGCCCTTTTGTAAGTAGGAG 58.477 50.000 0.00 0.00 0.00 3.69
791 904 2.235402 CCGAGCCCTTTTGTAAGTAGGA 59.765 50.000 0.00 0.00 0.00 2.94
792 905 2.629051 CCGAGCCCTTTTGTAAGTAGG 58.371 52.381 0.00 0.00 0.00 3.18
794 907 1.339342 GGCCGAGCCCTTTTGTAAGTA 60.339 52.381 3.73 0.00 44.06 2.24
795 908 0.608308 GGCCGAGCCCTTTTGTAAGT 60.608 55.000 3.73 0.00 44.06 2.24
819 953 1.410882 CCTAGCTAGCTCTGGGTTGAC 59.589 57.143 23.26 0.00 30.91 3.18
859 993 2.289882 TGCTGTTCCTGGATTCAGTGAG 60.290 50.000 21.75 6.63 39.31 3.51
860 994 1.699083 TGCTGTTCCTGGATTCAGTGA 59.301 47.619 21.75 11.94 39.31 3.41
862 996 1.612726 GCTGCTGTTCCTGGATTCAGT 60.613 52.381 21.75 0.00 39.31 3.41
863 997 1.093159 GCTGCTGTTCCTGGATTCAG 58.907 55.000 18.75 18.75 40.59 3.02
864 998 0.401356 TGCTGCTGTTCCTGGATTCA 59.599 50.000 0.00 0.00 0.00 2.57
865 999 1.093159 CTGCTGCTGTTCCTGGATTC 58.907 55.000 0.00 0.00 0.00 2.52
866 1000 0.964358 GCTGCTGCTGTTCCTGGATT 60.964 55.000 8.53 0.00 36.03 3.01
868 1002 2.033141 GCTGCTGCTGTTCCTGGA 59.967 61.111 8.53 0.00 36.03 3.86
869 1003 2.281970 TGCTGCTGCTGTTCCTGG 60.282 61.111 17.00 0.00 40.48 4.45
873 1007 2.561885 CTGCTGCTGCTGCTGTTC 59.438 61.111 27.67 8.30 39.81 3.18
874 1008 2.984155 CCTGCTGCTGCTGCTGTT 60.984 61.111 27.67 0.00 39.81 3.16
876 1010 3.432588 GACCTGCTGCTGCTGCTG 61.433 66.667 27.67 25.97 40.48 4.41
907 1056 1.001393 GAAACAGAATGGGGGCCGA 60.001 57.895 0.00 0.00 43.62 5.54
909 1058 0.897621 CAAGAAACAGAATGGGGGCC 59.102 55.000 0.00 0.00 43.62 5.80
943 1106 6.606796 TCAGAAATAGCAGAGTCAGAAGAGAT 59.393 38.462 0.00 0.00 0.00 2.75
948 1111 6.535963 TGATCAGAAATAGCAGAGTCAGAA 57.464 37.500 0.00 0.00 0.00 3.02
949 1112 6.323225 TCATGATCAGAAATAGCAGAGTCAGA 59.677 38.462 0.09 0.00 0.00 3.27
950 1113 6.421501 GTCATGATCAGAAATAGCAGAGTCAG 59.578 42.308 0.00 0.00 0.00 3.51
951 1114 6.097981 AGTCATGATCAGAAATAGCAGAGTCA 59.902 38.462 0.00 0.00 0.00 3.41
969 1132 5.124617 GTGTGTAGAGTCTGATCAGTCATGA 59.875 44.000 21.92 0.00 40.50 3.07
970 1133 5.339177 GTGTGTAGAGTCTGATCAGTCATG 58.661 45.833 21.92 0.00 32.98 3.07
971 1134 4.400884 GGTGTGTAGAGTCTGATCAGTCAT 59.599 45.833 21.92 11.77 32.98 3.06
972 1135 3.759086 GGTGTGTAGAGTCTGATCAGTCA 59.241 47.826 21.92 0.90 0.00 3.41
973 1136 3.129638 GGGTGTGTAGAGTCTGATCAGTC 59.870 52.174 21.92 16.63 0.00 3.51
974 1137 3.093057 GGGTGTGTAGAGTCTGATCAGT 58.907 50.000 21.92 3.90 0.00 3.41
975 1138 3.092301 TGGGTGTGTAGAGTCTGATCAG 58.908 50.000 17.07 17.07 0.00 2.90
986 1149 3.520290 ACGACATGTATGGGTGTGTAG 57.480 47.619 0.00 0.00 0.00 2.74
1026 3334 3.554342 CTCGCCCTCCCCTCCATG 61.554 72.222 0.00 0.00 0.00 3.66
1081 3389 3.465403 CTCCGGCTCCACCCTGAG 61.465 72.222 0.00 0.00 33.26 3.35
1124 3438 3.636231 CCGCCACTCTTGTCCCCA 61.636 66.667 0.00 0.00 0.00 4.96
1131 3445 1.119574 AGTACACCACCGCCACTCTT 61.120 55.000 0.00 0.00 0.00 2.85
1134 3448 1.969862 GTAGTACACCACCGCCACT 59.030 57.895 0.00 0.00 0.00 4.00
1167 3481 3.611674 TGCGGGTGCTCGAGTTGA 61.612 61.111 15.13 0.00 43.34 3.18
1170 3484 3.575351 GAAGTGCGGGTGCTCGAGT 62.575 63.158 15.13 0.00 43.34 4.18
1173 3487 2.434884 ATGAAGTGCGGGTGCTCG 60.435 61.111 0.00 0.00 43.34 5.03
1197 3511 3.190738 TTGTGGGGAGGCGAGTTGG 62.191 63.158 0.00 0.00 0.00 3.77
1199 3513 2.750350 CTTGTGGGGAGGCGAGTT 59.250 61.111 0.00 0.00 0.00 3.01
1227 3541 3.130693 AGCAGCTTACTAACTAACCTCGG 59.869 47.826 0.00 0.00 0.00 4.63
1249 3563 4.706476 AGCAATAAAAATCAGGCTGCAGTA 59.294 37.500 16.64 0.00 0.00 2.74
1270 3584 2.484264 CCTACAACAAACCACTAGCAGC 59.516 50.000 0.00 0.00 0.00 5.25
1305 3631 7.982224 TGAACAAACAAATTGCAATCATTCAA 58.018 26.923 13.38 0.00 43.13 2.69
1375 3701 1.281867 CAGGACCAGGAATACTTGGCA 59.718 52.381 0.00 0.00 45.50 4.92
1404 3730 5.616554 TGGGTATGTATGTAGGTAGGTAGGA 59.383 44.000 0.00 0.00 0.00 2.94
1410 3736 6.829298 AGATCGATGGGTATGTATGTAGGTAG 59.171 42.308 0.54 0.00 0.00 3.18
1414 3740 7.121315 TCTCAAGATCGATGGGTATGTATGTAG 59.879 40.741 0.54 0.00 0.00 2.74
1417 3743 6.096036 GTCTCAAGATCGATGGGTATGTATG 58.904 44.000 0.54 0.00 0.00 2.39
1418 3744 5.186021 GGTCTCAAGATCGATGGGTATGTAT 59.814 44.000 0.54 0.00 0.00 2.29
1419 3745 4.523173 GGTCTCAAGATCGATGGGTATGTA 59.477 45.833 0.54 0.00 0.00 2.29
1421 3747 3.306364 GGGTCTCAAGATCGATGGGTATG 60.306 52.174 0.54 0.00 0.00 2.39
1621 6068 6.942576 ACTCATATGGAATTAATACCTGGCAC 59.057 38.462 2.13 0.00 0.00 5.01
1641 6088 6.432162 ACAAATTACAGTTGCTCATGACTCAT 59.568 34.615 0.00 0.00 0.00 2.90
1642 6089 5.764686 ACAAATTACAGTTGCTCATGACTCA 59.235 36.000 0.00 0.00 0.00 3.41
1645 6092 4.618489 GCACAAATTACAGTTGCTCATGAC 59.382 41.667 0.00 0.00 0.00 3.06
1667 6114 0.752658 AAGTGGCAGTTTGGAAAGGC 59.247 50.000 0.63 0.00 0.00 4.35
1673 6120 3.129287 GGTATGATGAAGTGGCAGTTTGG 59.871 47.826 9.30 0.00 0.00 3.28
1674 6121 3.129287 GGGTATGATGAAGTGGCAGTTTG 59.871 47.826 9.30 0.00 0.00 2.93
1675 6123 3.010584 AGGGTATGATGAAGTGGCAGTTT 59.989 43.478 9.30 0.00 0.00 2.66
1687 6136 6.820335 TGATCTGAAACAGTAGGGTATGATG 58.180 40.000 0.00 0.00 32.61 3.07
1694 6145 4.125703 GCTGATGATCTGAAACAGTAGGG 58.874 47.826 3.33 0.00 32.61 3.53
1736 6187 1.615392 GGCTGAACCTTTGCATTGTCT 59.385 47.619 0.00 0.00 34.51 3.41
1737 6188 1.337167 GGGCTGAACCTTTGCATTGTC 60.337 52.381 0.00 0.00 39.10 3.18
1738 6189 0.681175 GGGCTGAACCTTTGCATTGT 59.319 50.000 0.00 0.00 39.10 2.71
1739 6190 0.971386 AGGGCTGAACCTTTGCATTG 59.029 50.000 0.00 0.00 37.69 2.82
1740 6191 0.971386 CAGGGCTGAACCTTTGCATT 59.029 50.000 0.00 0.00 39.34 3.56
1741 6192 1.538687 GCAGGGCTGAACCTTTGCAT 61.539 55.000 0.00 0.00 43.87 3.96
1742 6193 2.202395 GCAGGGCTGAACCTTTGCA 61.202 57.895 0.00 0.00 43.87 4.08
1743 6194 1.747325 TTGCAGGGCTGAACCTTTGC 61.747 55.000 0.00 0.00 44.35 3.68
1744 6195 0.316204 CTTGCAGGGCTGAACCTTTG 59.684 55.000 0.00 0.00 39.34 2.77
1859 6316 4.103153 ACTTCCTCTTTGATGACTGGAACA 59.897 41.667 0.00 0.00 31.36 3.18
1919 6418 2.484264 GACCTCTTTCATGGTTGGAACG 59.516 50.000 0.00 0.00 36.59 3.95
1926 6425 1.079127 CCGCGACCTCTTTCATGGT 60.079 57.895 8.23 0.00 39.60 3.55
1969 6468 1.374252 GATGGTGTTGACGGCGAGT 60.374 57.895 16.62 0.00 0.00 4.18
2009 6508 1.331756 GGTGGTATTCTGCATTGCTCG 59.668 52.381 10.49 1.28 0.00 5.03
2141 6640 3.535561 CCACCTCGCTTTATCATCTGTT 58.464 45.455 0.00 0.00 0.00 3.16
2144 6643 2.103263 GTCCCACCTCGCTTTATCATCT 59.897 50.000 0.00 0.00 0.00 2.90
2157 6656 3.048602 CTTCACGTCGTCCCACCT 58.951 61.111 0.00 0.00 0.00 4.00
2191 6690 2.484742 TGATGATGCTCTTGCTGTGT 57.515 45.000 0.00 0.00 40.48 3.72
2231 6736 4.142790 GGGATACTTCCTCATCTACGACA 58.857 47.826 0.00 0.00 42.20 4.35
2237 6742 2.103263 GCAACGGGATACTTCCTCATCT 59.897 50.000 0.00 0.00 42.20 2.90
2240 6745 1.066430 GTGCAACGGGATACTTCCTCA 60.066 52.381 0.00 0.00 42.20 3.86
2246 6751 2.288025 ACGGGTGCAACGGGATACT 61.288 57.895 14.38 0.00 38.12 2.12
2247 6752 2.104253 CACGGGTGCAACGGGATAC 61.104 63.158 14.38 0.00 36.74 2.24
2248 6753 2.266372 CACGGGTGCAACGGGATA 59.734 61.111 14.38 0.00 36.74 2.59
2280 6788 4.711949 CCTGCTGCGAGGCTGGTT 62.712 66.667 14.48 0.00 43.36 3.67
2496 7007 0.885879 TTGTAGGACGACGTCTGCAT 59.114 50.000 25.87 12.93 32.47 3.96
2510 7024 1.908066 GCGGGAAACACGGCTTGTAG 61.908 60.000 0.00 0.00 37.51 2.74
2545 7059 2.276116 GGACACAGCTCCGGAGACA 61.276 63.158 35.69 0.00 0.00 3.41
2741 7261 7.221067 GCTACGTGCTTCAGGATTGATATATAC 59.779 40.741 0.00 0.00 38.95 1.47
2747 7267 2.093500 TGCTACGTGCTTCAGGATTGAT 60.093 45.455 0.00 0.00 43.37 2.57
2748 7268 1.275010 TGCTACGTGCTTCAGGATTGA 59.725 47.619 0.00 0.00 43.37 2.57
2749 7269 1.394917 GTGCTACGTGCTTCAGGATTG 59.605 52.381 0.00 0.00 43.37 2.67
2750 7270 1.726853 GTGCTACGTGCTTCAGGATT 58.273 50.000 0.00 0.00 43.37 3.01
2770 7290 5.221891 TCTTCGCAAATAACTCTGCAATC 57.778 39.130 0.00 0.00 38.52 2.67
2788 7308 2.158645 GCCACGCTTCTTCTTCTTCTTC 59.841 50.000 0.00 0.00 0.00 2.87
2789 7309 2.147150 GCCACGCTTCTTCTTCTTCTT 58.853 47.619 0.00 0.00 0.00 2.52
2790 7310 1.609320 GGCCACGCTTCTTCTTCTTCT 60.609 52.381 0.00 0.00 0.00 2.85
2825 7345 3.016474 GCGCTTCTCGACAGGTTGC 62.016 63.158 0.00 0.00 41.67 4.17
2844 7364 1.214062 CTCGCTCGTCCTCTTGCTT 59.786 57.895 0.00 0.00 0.00 3.91
2874 7394 0.472471 TTGAACAAGAGGCCGTCCTT 59.528 50.000 0.00 0.00 44.46 3.36
2987 7672 0.610232 GAGCTGTGCCCAGTTCCAAT 60.610 55.000 1.54 0.00 41.57 3.16
2998 7683 2.741517 GGAAGAAGAAGAAGAGCTGTGC 59.258 50.000 0.00 0.00 0.00 4.57
2999 7684 4.021192 AGAGGAAGAAGAAGAAGAGCTGTG 60.021 45.833 0.00 0.00 0.00 3.66
3000 7685 4.159557 AGAGGAAGAAGAAGAAGAGCTGT 58.840 43.478 0.00 0.00 0.00 4.40
3019 7704 7.009907 CAGCCAAACAAGAAAAGAAAAGAAGAG 59.990 37.037 0.00 0.00 0.00 2.85
3021 7706 6.591448 ACAGCCAAACAAGAAAAGAAAAGAAG 59.409 34.615 0.00 0.00 0.00 2.85
3023 7708 5.868801 CACAGCCAAACAAGAAAAGAAAAGA 59.131 36.000 0.00 0.00 0.00 2.52
3029 7718 6.667007 AAATTCACAGCCAAACAAGAAAAG 57.333 33.333 0.00 0.00 0.00 2.27
3038 7727 2.030363 CCGCACTAAATTCACAGCCAAA 60.030 45.455 0.00 0.00 0.00 3.28
3128 7831 5.838531 AATTCTTGTCGTGGTGGTTTTAA 57.161 34.783 0.00 0.00 0.00 1.52
3168 7871 5.877012 CCAACTGCCAACATATATAGCTAGG 59.123 44.000 0.00 0.00 0.00 3.02
3276 7982 2.424341 GACGACGACAACAACAACAAC 58.576 47.619 0.00 0.00 0.00 3.32
3277 7983 1.059407 CGACGACGACAACAACAACAA 59.941 47.619 0.00 0.00 42.66 2.83
3278 7984 0.641275 CGACGACGACAACAACAACA 59.359 50.000 0.00 0.00 42.66 3.33
3279 7985 0.641783 ACGACGACGACAACAACAAC 59.358 50.000 15.32 0.00 42.66 3.32
3280 7986 0.915904 GACGACGACGACAACAACAA 59.084 50.000 15.32 0.00 42.66 2.83
3281 7987 1.195513 CGACGACGACGACAACAACA 61.196 55.000 15.32 0.00 42.66 3.33
3282 7988 1.196130 ACGACGACGACGACAACAAC 61.196 55.000 25.15 0.00 42.66 3.32
3283 7989 0.303191 TACGACGACGACGACAACAA 59.697 50.000 25.15 1.95 42.66 2.83
3284 7990 0.383002 GTACGACGACGACGACAACA 60.383 55.000 25.15 3.24 42.66 3.33
3285 7991 0.111089 AGTACGACGACGACGACAAC 60.111 55.000 25.15 17.99 42.66 3.32
3286 7992 1.386748 CTAGTACGACGACGACGACAA 59.613 52.381 25.15 8.17 42.66 3.18
3287 7993 0.984829 CTAGTACGACGACGACGACA 59.015 55.000 25.15 10.21 42.66 4.35
3288 7994 0.985549 ACTAGTACGACGACGACGAC 59.014 55.000 25.15 17.36 42.66 4.34
3289 7995 2.159558 ACTACTAGTACGACGACGACGA 60.160 50.000 25.15 7.18 42.66 4.20
3290 7996 2.036168 CACTACTAGTACGACGACGACG 60.036 54.545 17.60 17.60 42.66 5.12
3291 7997 3.172050 TCACTACTAGTACGACGACGAC 58.828 50.000 15.32 7.92 42.66 4.34
3292 7998 3.487563 TCACTACTAGTACGACGACGA 57.512 47.619 15.32 0.00 42.66 4.20
3293 7999 3.793492 TCATCACTACTAGTACGACGACG 59.207 47.826 5.58 5.58 45.75 5.12
3296 8002 5.715429 ACTTCATCACTACTAGTACGACG 57.285 43.478 0.00 0.00 0.00 5.12
3299 8005 6.323266 AGCAAACTTCATCACTACTAGTACG 58.677 40.000 0.00 0.00 0.00 3.67
3379 8470 6.554982 TGTATCACAGTATTAGCCAAGGAGAT 59.445 38.462 0.00 0.00 0.00 2.75
3380 8471 5.897250 TGTATCACAGTATTAGCCAAGGAGA 59.103 40.000 0.00 0.00 0.00 3.71
3395 8486 3.565482 ACAAGCAACCAAGTGTATCACAG 59.435 43.478 2.80 0.00 36.74 3.66
3396 8487 3.314913 CACAAGCAACCAAGTGTATCACA 59.685 43.478 2.80 0.00 36.74 3.58
3397 8488 3.304659 CCACAAGCAACCAAGTGTATCAC 60.305 47.826 0.00 0.00 34.10 3.06
3398 8489 2.884012 CCACAAGCAACCAAGTGTATCA 59.116 45.455 0.00 0.00 0.00 2.15
3399 8490 3.146066 TCCACAAGCAACCAAGTGTATC 58.854 45.455 0.00 0.00 0.00 2.24
3438 8566 2.036862 TGCCATCAGATCTGAATCTCGG 59.963 50.000 28.40 21.84 43.58 4.63
3439 8567 3.318886 CTGCCATCAGATCTGAATCTCG 58.681 50.000 28.40 14.62 43.58 4.04
3440 8568 3.068560 GCTGCCATCAGATCTGAATCTC 58.931 50.000 28.40 17.30 43.58 2.75
3441 8569 2.706723 AGCTGCCATCAGATCTGAATCT 59.293 45.455 28.40 10.50 43.58 2.40
3459 8587 0.034616 GAGTTGAGTGAGTGGCAGCT 59.965 55.000 0.00 0.00 0.00 4.24
3496 8628 3.088532 AGTAGACAAGAGGACTGCTCTG 58.911 50.000 0.04 0.00 0.00 3.35
3497 8629 3.352648 GAGTAGACAAGAGGACTGCTCT 58.647 50.000 0.00 0.00 39.20 4.09
3498 8630 2.425668 GGAGTAGACAAGAGGACTGCTC 59.574 54.545 0.00 0.00 40.67 4.26
3505 8637 0.173708 GCGGTGGAGTAGACAAGAGG 59.826 60.000 0.00 0.00 0.00 3.69
3530 8662 2.821366 GCTGCCACACCGATCTGG 60.821 66.667 2.55 2.55 46.41 3.86
3534 8666 3.371097 CTACCGCTGCCACACCGAT 62.371 63.158 0.00 0.00 0.00 4.18
3535 8667 4.063967 CTACCGCTGCCACACCGA 62.064 66.667 0.00 0.00 0.00 4.69
3537 8669 2.652095 TACCTACCGCTGCCACACC 61.652 63.158 0.00 0.00 0.00 4.16
3540 8672 0.107848 AATGTACCTACCGCTGCCAC 60.108 55.000 0.00 0.00 0.00 5.01
3541 8673 0.107897 CAATGTACCTACCGCTGCCA 60.108 55.000 0.00 0.00 0.00 4.92
3542 8674 1.436983 GCAATGTACCTACCGCTGCC 61.437 60.000 0.00 0.00 0.00 4.85
3544 8676 1.953559 ATGCAATGTACCTACCGCTG 58.046 50.000 0.00 0.00 0.00 5.18
3546 8678 1.790623 CGTATGCAATGTACCTACCGC 59.209 52.381 0.00 0.00 0.00 5.68
3547 8679 2.792674 CACGTATGCAATGTACCTACCG 59.207 50.000 0.00 0.00 0.00 4.02
3578 8722 2.456073 ACCTACCTAGCTACTGGGTG 57.544 55.000 12.42 0.05 44.93 4.61
3581 8725 3.205784 ACGTACCTACCTAGCTACTGG 57.794 52.381 0.00 0.00 0.00 4.00
3582 8726 5.574830 CGTATACGTACCTACCTAGCTACTG 59.425 48.000 17.16 0.00 34.11 2.74
3583 8727 5.715070 CGTATACGTACCTACCTAGCTACT 58.285 45.833 17.16 0.00 34.11 2.57
3647 8991 6.145535 AGATTCGTCATGCAGTTTTCTTTTC 58.854 36.000 0.00 0.00 0.00 2.29
3649 8993 5.695851 AGATTCGTCATGCAGTTTTCTTT 57.304 34.783 0.00 0.00 0.00 2.52
3650 8994 5.934625 ACTAGATTCGTCATGCAGTTTTCTT 59.065 36.000 0.00 0.00 0.00 2.52
3651 8995 5.349817 CACTAGATTCGTCATGCAGTTTTCT 59.650 40.000 0.00 0.00 0.00 2.52
3652 8996 5.348724 TCACTAGATTCGTCATGCAGTTTTC 59.651 40.000 0.00 0.00 0.00 2.29
3653 8997 5.237815 TCACTAGATTCGTCATGCAGTTTT 58.762 37.500 0.00 0.00 0.00 2.43
3656 9000 4.662468 ATCACTAGATTCGTCATGCAGT 57.338 40.909 0.00 0.00 0.00 4.40
3665 9009 6.346120 CCGAAGTTGCAATATCACTAGATTCG 60.346 42.308 0.59 1.49 35.67 3.34
3669 9013 5.592104 TCCGAAGTTGCAATATCACTAGA 57.408 39.130 0.59 0.00 0.00 2.43
3682 9026 1.299541 CCCATCCGAATCCGAAGTTG 58.700 55.000 0.00 0.00 38.22 3.16
3683 9027 0.180406 CCCCATCCGAATCCGAAGTT 59.820 55.000 0.00 0.00 38.22 2.66
3684 9028 1.830145 CCCCATCCGAATCCGAAGT 59.170 57.895 0.00 0.00 38.22 3.01
3685 9029 1.598130 GCCCCATCCGAATCCGAAG 60.598 63.158 0.00 0.00 38.22 3.79
3688 9032 2.902423 TTTGGCCCCATCCGAATCCG 62.902 60.000 0.00 0.00 0.00 4.18
3689 9033 0.686112 TTTTGGCCCCATCCGAATCC 60.686 55.000 0.00 0.00 30.00 3.01
3690 9034 1.134818 GTTTTTGGCCCCATCCGAATC 60.135 52.381 0.00 0.00 30.00 2.52
3691 9035 0.901827 GTTTTTGGCCCCATCCGAAT 59.098 50.000 0.00 0.00 30.00 3.34
3694 9038 1.933115 CTCGTTTTTGGCCCCATCCG 61.933 60.000 0.00 0.00 0.00 4.18
3695 9039 1.890174 CTCGTTTTTGGCCCCATCC 59.110 57.895 0.00 0.00 0.00 3.51
3696 9040 1.215382 GCTCGTTTTTGGCCCCATC 59.785 57.895 0.00 0.00 0.00 3.51
3697 9041 2.635443 CGCTCGTTTTTGGCCCCAT 61.635 57.895 0.00 0.00 0.00 4.00
3698 9042 3.291383 CGCTCGTTTTTGGCCCCA 61.291 61.111 0.00 0.00 0.00 4.96
3699 9043 4.050934 CCGCTCGTTTTTGGCCCC 62.051 66.667 0.00 0.00 0.00 5.80
3700 9044 1.517210 TTACCGCTCGTTTTTGGCCC 61.517 55.000 0.00 0.00 0.00 5.80
3701 9045 0.311477 TTTACCGCTCGTTTTTGGCC 59.689 50.000 0.00 0.00 0.00 5.36
3703 9047 3.058501 AGTGATTTACCGCTCGTTTTTGG 60.059 43.478 0.00 0.00 0.00 3.28
3704 9048 4.141855 AGTGATTTACCGCTCGTTTTTG 57.858 40.909 0.00 0.00 0.00 2.44
3706 9050 3.930848 CCTAGTGATTTACCGCTCGTTTT 59.069 43.478 0.00 0.00 0.00 2.43
3707 9051 3.518590 CCTAGTGATTTACCGCTCGTTT 58.481 45.455 0.00 0.00 0.00 3.60
3708 9052 2.737679 GCCTAGTGATTTACCGCTCGTT 60.738 50.000 0.00 0.00 0.00 3.85
3709 9053 1.202382 GCCTAGTGATTTACCGCTCGT 60.202 52.381 0.00 0.00 0.00 4.18
3710 9054 1.488527 GCCTAGTGATTTACCGCTCG 58.511 55.000 0.00 0.00 0.00 5.03
3711 9055 1.540580 GGGCCTAGTGATTTACCGCTC 60.541 57.143 0.84 0.00 0.00 5.03
3712 9056 0.468648 GGGCCTAGTGATTTACCGCT 59.531 55.000 0.84 0.00 0.00 5.52
3713 9057 0.468648 AGGGCCTAGTGATTTACCGC 59.531 55.000 2.82 0.00 0.00 5.68
3714 9058 1.485066 ACAGGGCCTAGTGATTTACCG 59.515 52.381 5.28 0.00 0.00 4.02
3715 9059 3.646736 AACAGGGCCTAGTGATTTACC 57.353 47.619 5.28 0.00 0.00 2.85
3716 9060 4.765339 ACAAAACAGGGCCTAGTGATTTAC 59.235 41.667 5.28 0.00 0.00 2.01
3717 9061 4.993028 ACAAAACAGGGCCTAGTGATTTA 58.007 39.130 5.28 0.00 0.00 1.40
3720 9064 3.525800 AACAAAACAGGGCCTAGTGAT 57.474 42.857 5.28 0.00 0.00 3.06
3722 9066 2.035832 CCAAACAAAACAGGGCCTAGTG 59.964 50.000 5.28 4.46 0.00 2.74
3723 9067 2.316108 CCAAACAAAACAGGGCCTAGT 58.684 47.619 5.28 3.98 0.00 2.57
3724 9068 1.618343 CCCAAACAAAACAGGGCCTAG 59.382 52.381 5.28 3.22 33.91 3.02
3729 9073 2.682352 CAAAAGCCCAAACAAAACAGGG 59.318 45.455 0.00 0.00 44.37 4.45
3731 9075 3.009026 AGCAAAAGCCCAAACAAAACAG 58.991 40.909 0.00 0.00 0.00 3.16
3735 9079 2.275318 CGAAGCAAAAGCCCAAACAAA 58.725 42.857 0.00 0.00 0.00 2.83
3737 9081 0.103937 CCGAAGCAAAAGCCCAAACA 59.896 50.000 0.00 0.00 0.00 2.83
3738 9082 1.221466 GCCGAAGCAAAAGCCCAAAC 61.221 55.000 0.00 0.00 39.53 2.93
3739 9083 1.068921 GCCGAAGCAAAAGCCCAAA 59.931 52.632 0.00 0.00 39.53 3.28
3740 9084 1.398958 AAGCCGAAGCAAAAGCCCAA 61.399 50.000 0.00 0.00 43.56 4.12
3742 9086 0.249868 AAAAGCCGAAGCAAAAGCCC 60.250 50.000 0.00 0.00 43.56 5.19
3744 9088 0.233074 GCAAAAGCCGAAGCAAAAGC 59.767 50.000 0.00 0.00 43.56 3.51
3757 9101 0.172803 GCATCTGGGAGCTGCAAAAG 59.827 55.000 7.79 1.28 37.31 2.27
3758 9102 0.251474 AGCATCTGGGAGCTGCAAAA 60.251 50.000 7.79 0.00 39.63 2.44
3759 9103 1.381463 AGCATCTGGGAGCTGCAAA 59.619 52.632 7.79 0.00 39.63 3.68
3760 9104 3.084304 AGCATCTGGGAGCTGCAA 58.916 55.556 7.79 0.00 39.63 4.08
3764 9108 1.693062 CTACATCAGCATCTGGGAGCT 59.307 52.381 0.00 0.00 42.94 4.09
3765 9109 2.166821 CTACATCAGCATCTGGGAGC 57.833 55.000 0.00 0.00 31.51 4.70
3776 9120 2.351726 GCTTTGTTACGGGCTACATCAG 59.648 50.000 0.00 0.00 0.00 2.90
3777 9121 2.289756 TGCTTTGTTACGGGCTACATCA 60.290 45.455 0.00 0.00 0.00 3.07
3778 9122 2.352388 TGCTTTGTTACGGGCTACATC 58.648 47.619 0.00 0.00 0.00 3.06
3781 9125 3.064408 GGTTATGCTTTGTTACGGGCTAC 59.936 47.826 0.00 0.00 0.00 3.58
3782 9126 3.272581 GGTTATGCTTTGTTACGGGCTA 58.727 45.455 0.00 0.00 0.00 3.93
3785 9129 3.253677 TGTTGGTTATGCTTTGTTACGGG 59.746 43.478 0.00 0.00 0.00 5.28
3786 9130 4.223659 GTGTTGGTTATGCTTTGTTACGG 58.776 43.478 0.00 0.00 0.00 4.02
3789 9133 5.583495 GTGTGTGTTGGTTATGCTTTGTTA 58.417 37.500 0.00 0.00 0.00 2.41
3790 9134 4.429108 GTGTGTGTTGGTTATGCTTTGTT 58.571 39.130 0.00 0.00 0.00 2.83
3791 9135 3.488384 CGTGTGTGTTGGTTATGCTTTGT 60.488 43.478 0.00 0.00 0.00 2.83
3792 9136 3.042189 CGTGTGTGTTGGTTATGCTTTG 58.958 45.455 0.00 0.00 0.00 2.77
3793 9137 2.034053 CCGTGTGTGTTGGTTATGCTTT 59.966 45.455 0.00 0.00 0.00 3.51
3794 9138 1.606668 CCGTGTGTGTTGGTTATGCTT 59.393 47.619 0.00 0.00 0.00 3.91
3796 9140 0.239879 CCCGTGTGTGTTGGTTATGC 59.760 55.000 0.00 0.00 0.00 3.14
3797 9141 0.239879 GCCCGTGTGTGTTGGTTATG 59.760 55.000 0.00 0.00 0.00 1.90
3799 9143 0.393944 TTGCCCGTGTGTGTTGGTTA 60.394 50.000 0.00 0.00 0.00 2.85
3802 9146 0.103937 AAATTGCCCGTGTGTGTTGG 59.896 50.000 0.00 0.00 0.00 3.77
3803 9147 1.592081 CAAAATTGCCCGTGTGTGTTG 59.408 47.619 0.00 0.00 0.00 3.33
3804 9148 1.472376 CCAAAATTGCCCGTGTGTGTT 60.472 47.619 0.00 0.00 0.00 3.32
3835 9185 2.175202 AGTCGAGAGAGTGGCATTTCT 58.825 47.619 4.41 4.41 43.46 2.52
3836 9186 2.663826 AGTCGAGAGAGTGGCATTTC 57.336 50.000 0.00 0.00 43.46 2.17
3837 9187 3.093057 ACTAGTCGAGAGAGTGGCATTT 58.907 45.455 0.00 0.00 44.91 2.32
3843 9193 4.696402 AGTTTACCACTAGTCGAGAGAGTG 59.304 45.833 12.30 12.30 45.04 3.51
3845 9195 5.883503 AAGTTTACCACTAGTCGAGAGAG 57.116 43.478 0.00 0.00 35.84 3.20
3846 9196 7.164122 TCTTAAGTTTACCACTAGTCGAGAGA 58.836 38.462 1.63 0.00 32.94 3.10
3847 9197 7.375106 TCTTAAGTTTACCACTAGTCGAGAG 57.625 40.000 1.63 0.00 32.94 3.20
3849 9199 8.861101 CATTTCTTAAGTTTACCACTAGTCGAG 58.139 37.037 1.63 0.00 32.94 4.04
3850 9200 7.330208 GCATTTCTTAAGTTTACCACTAGTCGA 59.670 37.037 1.63 0.00 32.94 4.20
3851 9201 7.412672 GGCATTTCTTAAGTTTACCACTAGTCG 60.413 40.741 1.63 0.00 32.94 4.18
3852 9202 7.389607 TGGCATTTCTTAAGTTTACCACTAGTC 59.610 37.037 1.63 0.00 32.94 2.59
3853 9203 7.174426 GTGGCATTTCTTAAGTTTACCACTAGT 59.826 37.037 20.24 0.00 41.40 2.57
3865 9235 1.824852 GGGGTGGTGGCATTTCTTAAG 59.175 52.381 0.00 0.00 0.00 1.85
3866 9236 1.148027 TGGGGTGGTGGCATTTCTTAA 59.852 47.619 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.