Multiple sequence alignment - TraesCS4A01G309600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G309600 chr4A 100.000 4266 0 0 1 4266 602872144 602876409 0.000000e+00 7878.0
1 TraesCS4A01G309600 chr4A 88.427 2860 254 34 163 2984 602609135 602611955 0.000000e+00 3376.0
2 TraesCS4A01G309600 chr4A 91.113 934 77 1 1262 2195 602726157 602727084 0.000000e+00 1260.0
3 TraesCS4A01G309600 chr4A 88.614 931 99 7 2015 2940 602722320 602723248 0.000000e+00 1125.0
4 TraesCS4A01G309600 chr4A 86.222 450 47 9 2538 2986 602725315 602725750 1.390000e-129 473.0
5 TraesCS4A01G309600 chr4A 89.286 280 19 5 3715 3985 602613311 602613588 1.470000e-89 340.0
6 TraesCS4A01G309600 chr4A 97.802 182 1 2 3001 3181 6935655 6935476 1.150000e-80 311.0
7 TraesCS4A01G309600 chr4A 93.902 82 4 1 3187 3267 602612007 602612088 5.790000e-24 122.0
8 TraesCS4A01G309600 chr4A 90.698 86 8 0 11 96 602608822 602608907 9.690000e-22 115.0
9 TraesCS4A01G309600 chr4A 92.105 76 6 0 94 169 602609001 602609076 1.620000e-19 108.0
10 TraesCS4A01G309600 chr4A 97.727 44 1 0 3310 3353 602612091 602612134 4.570000e-10 76.8
11 TraesCS4A01G309600 chr4D 92.176 2863 180 20 163 2986 1874021 1876878 0.000000e+00 4006.0
12 TraesCS4A01G309600 chr4D 87.887 2196 243 18 805 2986 1823272 1825458 0.000000e+00 2560.0
13 TraesCS4A01G309600 chr4D 84.599 461 50 11 3538 3989 1825798 1826246 5.060000e-119 438.0
14 TraesCS4A01G309600 chr4D 83.738 412 56 9 3577 3988 1877232 1877632 3.110000e-101 379.0
15 TraesCS4A01G309600 chr4D 84.641 306 31 9 3187 3490 1825508 1825799 1.500000e-74 291.0
16 TraesCS4A01G309600 chr4D 95.783 166 7 0 1 166 1873794 1873959 7.030000e-68 268.0
17 TraesCS4A01G309600 chr4D 84.701 268 16 11 3187 3451 1876928 1877173 1.180000e-60 244.0
18 TraesCS4A01G309600 chr4D 92.793 111 7 1 4028 4138 1826458 1826567 4.420000e-35 159.0
19 TraesCS4A01G309600 chr4D 84.091 132 7 5 4135 4266 1814239 1814356 9.690000e-22 115.0
20 TraesCS4A01G309600 chr4B 93.087 2358 136 6 163 2498 3340851 3338499 0.000000e+00 3426.0
21 TraesCS4A01G309600 chr4B 88.579 2189 237 6 809 2986 3733780 3735966 0.000000e+00 2645.0
22 TraesCS4A01G309600 chr4B 90.650 492 45 1 2495 2986 3337652 3337162 0.000000e+00 652.0
23 TraesCS4A01G309600 chr4B 98.864 176 2 0 3005 3180 599230171 599230346 8.900000e-82 315.0
24 TraesCS4A01G309600 chr4B 95.833 72 3 0 1 72 3341034 3340963 2.700000e-22 117.0
25 TraesCS4A01G309600 chr4B 87.234 94 12 0 3188 3281 3337134 3337041 1.620000e-19 108.0
26 TraesCS4A01G309600 chr4B 100.000 57 0 0 113 169 3340965 3340909 5.830000e-19 106.0
27 TraesCS4A01G309600 chr4B 89.655 58 6 0 3226 3283 3736011 3736068 1.650000e-09 75.0
28 TraesCS4A01G309600 chrUn 87.835 2877 255 34 163 2982 47659598 47662436 0.000000e+00 3286.0
29 TraesCS4A01G309600 chrUn 88.960 2183 234 4 809 2986 47452166 47454346 0.000000e+00 2689.0
30 TraesCS4A01G309600 chrUn 88.133 2191 240 14 809 2986 47631565 47633748 0.000000e+00 2588.0
31 TraesCS4A01G309600 chrUn 84.461 399 51 9 3591 3988 47454776 47455164 2.410000e-102 383.0
32 TraesCS4A01G309600 chrUn 99.429 175 0 1 3014 3187 75470857 75470683 2.480000e-82 316.0
33 TraesCS4A01G309600 chrUn 85.036 274 16 11 3187 3457 47662479 47662730 5.470000e-64 255.0
34 TraesCS4A01G309600 chrUn 80.226 354 35 11 3538 3889 47662792 47663112 2.560000e-57 233.0
35 TraesCS4A01G309600 chrUn 90.533 169 16 0 1 169 47659371 47659539 1.540000e-54 224.0
36 TraesCS4A01G309600 chr3B 86.493 422 44 2 1283 1704 60502695 60503103 6.500000e-123 451.0
37 TraesCS4A01G309600 chr7A 100.000 173 0 0 3012 3184 76122865 76123037 1.910000e-83 320.0
38 TraesCS4A01G309600 chr7A 98.333 180 1 2 3002 3180 1709404 1709582 8.900000e-82 315.0
39 TraesCS4A01G309600 chr1A 98.333 180 2 1 3015 3193 562740382 562740203 8.900000e-82 315.0
40 TraesCS4A01G309600 chr6B 98.864 176 1 1 3008 3183 602841107 602840933 3.200000e-81 313.0
41 TraesCS4A01G309600 chr6B 95.025 201 4 5 2983 3181 548130816 548130620 1.150000e-80 311.0
42 TraesCS4A01G309600 chr6A 99.415 171 1 0 3011 3181 64065387 64065217 1.150000e-80 311.0
43 TraesCS4A01G309600 chr1B 98.788 165 2 0 3017 3181 532161545 532161709 1.160000e-75 294.0
44 TraesCS4A01G309600 chr3D 94.350 177 6 3 3026 3202 435586617 435586789 7.030000e-68 268.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G309600 chr4A 602872144 602876409 4265 False 7878.000000 7878 100.000000 1 4266 1 chr4A.!!$F1 4265
1 TraesCS4A01G309600 chr4A 602722320 602727084 4764 False 952.666667 1260 88.649667 1262 2986 3 chr4A.!!$F3 1724
2 TraesCS4A01G309600 chr4A 602608822 602613588 4766 False 689.633333 3376 92.024167 11 3985 6 chr4A.!!$F2 3974
3 TraesCS4A01G309600 chr4D 1873794 1877632 3838 False 1224.250000 4006 89.099500 1 3988 4 chr4D.!!$F3 3987
4 TraesCS4A01G309600 chr4D 1823272 1826567 3295 False 862.000000 2560 87.480000 805 4138 4 chr4D.!!$F2 3333
5 TraesCS4A01G309600 chr4B 3733780 3736068 2288 False 1360.000000 2645 89.117000 809 3283 2 chr4B.!!$F2 2474
6 TraesCS4A01G309600 chr4B 3337041 3341034 3993 True 881.800000 3426 93.360800 1 3281 5 chr4B.!!$R1 3280
7 TraesCS4A01G309600 chrUn 47631565 47633748 2183 False 2588.000000 2588 88.133000 809 2986 1 chrUn.!!$F1 2177
8 TraesCS4A01G309600 chrUn 47452166 47455164 2998 False 1536.000000 2689 86.710500 809 3988 2 chrUn.!!$F2 3179
9 TraesCS4A01G309600 chrUn 47659371 47663112 3741 False 999.500000 3286 85.907500 1 3889 4 chrUn.!!$F3 3888

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 54 3.624900 TCAGTCTTAACACGAGTTCACG 58.375 45.455 0.18 0.0 39.15 4.35 F
1501 4079 0.322546 GCCTGGGGATTCGTTGACTT 60.323 55.000 0.00 0.0 0.00 3.01 F
3053 6511 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.0 34.10 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1979 4557 1.295292 ACCCATCTCCCACTCTACCAT 59.705 52.381 0.0 0.0 0.0 3.55 R
3223 6681 0.032540 GACCCTGGCAAGCAAAACAG 59.967 55.000 0.0 0.0 0.0 3.16 R
4170 8888 0.174845 GGCATGTAGTCGCTGGTGTA 59.825 55.000 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 3.624900 TCAGTCTTAACACGAGTTCACG 58.375 45.455 0.18 0.00 39.15 4.35
207 369 5.095490 GCAACTAACATGCACATAACTTCC 58.905 41.667 0.00 0.00 43.29 3.46
211 373 5.945784 ACTAACATGCACATAACTTCCATGT 59.054 36.000 0.00 0.00 45.88 3.21
526 710 9.622004 CGATATAACTGTAGATTTTGTACCGAT 57.378 33.333 0.00 0.00 0.00 4.18
622 818 9.719279 TTTGAAGCAACAATTTTCATTTGATTC 57.281 25.926 4.62 4.62 42.16 2.52
705 904 8.890718 GGTCATAAGGAGTATTAGTTTGGTTTC 58.109 37.037 0.00 0.00 0.00 2.78
773 972 4.142730 GCTGATCACCACTTTCAGATGTTC 60.143 45.833 3.47 0.00 39.36 3.18
840 1043 3.764434 TCACTACAGAGGAGAATGGACAC 59.236 47.826 0.00 0.00 0.00 3.67
1103 1309 5.103855 TCTCCCTTAAACCCAAAAAGTCTGA 60.104 40.000 0.00 0.00 0.00 3.27
1381 3959 7.912056 TCATCCAATTTTCTTAGACTGTCTG 57.088 36.000 20.19 4.72 0.00 3.51
1501 4079 0.322546 GCCTGGGGATTCGTTGACTT 60.323 55.000 0.00 0.00 0.00 3.01
1575 4153 7.010552 GCACTAGTTGAATCTATGTACCAACTG 59.989 40.741 16.76 11.26 44.68 3.16
1582 4160 4.202245 TCTATGTACCAACTGAAGCACC 57.798 45.455 0.00 0.00 0.00 5.01
1798 4376 5.305585 TCCGAGCTCTTACAAATTTGACTT 58.694 37.500 24.64 5.12 0.00 3.01
1857 4435 2.633481 GTGTAGTCTGGAAGAGTTGGGT 59.367 50.000 0.00 0.00 46.68 4.51
1921 4499 6.942576 AGAAAATGTATCTAGTGCCTTGTTGT 59.057 34.615 0.00 0.00 0.00 3.32
1979 4557 7.939039 ACTTATCTCTCTTGGTTTGAAATGTGA 59.061 33.333 0.00 0.00 0.00 3.58
2059 4637 4.461081 AGCAAATAATTGAGGCGGTGTTTA 59.539 37.500 0.00 0.00 38.94 2.01
2076 4654 4.697352 GTGTTTAATGTGCTCTGTCCTCAT 59.303 41.667 0.00 0.00 0.00 2.90
2103 4681 6.110543 TGCATAGAACAAATCAACATCGAG 57.889 37.500 0.00 0.00 0.00 4.04
2556 5990 5.200483 CAAGGTCTCCACTCTCTAGAGAAT 58.800 45.833 22.54 11.14 44.74 2.40
2626 6078 5.405797 GCAAGATCTCCAATCTTCCAAAAC 58.594 41.667 0.00 0.00 36.32 2.43
2638 6090 7.169813 CCAATCTTCCAAAACTACAAAAGCTTC 59.830 37.037 0.00 0.00 0.00 3.86
2722 6174 2.843113 CTGAGAGTTTCTCCCTGGGAAT 59.157 50.000 17.81 0.24 42.73 3.01
2798 6250 3.071023 TGCAACCTAGCAGTACTCACTTT 59.929 43.478 0.00 0.00 40.11 2.66
2831 6283 0.676736 GAATCTAGCTCCGAGTGGGG 59.323 60.000 0.00 0.00 39.55 4.96
2840 6292 1.228124 CCGAGTGGGGCAAGTTCAA 60.228 57.895 0.00 0.00 0.00 2.69
2847 6299 4.613437 AGTGGGGCAAGTTCAATCATATT 58.387 39.130 0.00 0.00 0.00 1.28
3018 6476 9.928618 TCAATCTAGTTGATATAGGATAGAGGG 57.071 37.037 4.31 0.00 41.79 4.30
3019 6477 8.637986 CAATCTAGTTGATATAGGATAGAGGGC 58.362 40.741 0.00 0.00 40.37 5.19
3020 6478 7.285340 TCTAGTTGATATAGGATAGAGGGCA 57.715 40.000 0.00 0.00 0.00 5.36
3022 6480 5.276440 AGTTGATATAGGATAGAGGGCAGG 58.724 45.833 0.00 0.00 0.00 4.85
3023 6481 3.647636 TGATATAGGATAGAGGGCAGGC 58.352 50.000 0.00 0.00 0.00 4.85
3024 6482 2.552093 TATAGGATAGAGGGCAGGCC 57.448 55.000 4.33 4.33 0.00 5.19
3025 6483 0.796255 ATAGGATAGAGGGCAGGCCT 59.204 55.000 17.36 17.36 36.10 5.19
3026 6484 0.178921 TAGGATAGAGGGCAGGCCTG 60.179 60.000 29.34 29.34 36.10 4.85
3027 6485 2.524204 GGATAGAGGGCAGGCCTGG 61.524 68.421 33.46 15.81 36.10 4.45
3040 6498 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
3041 6499 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
3042 6500 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
3043 6501 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
3044 6502 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
3045 6503 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
3046 6504 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
3047 6505 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
3048 6506 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
3049 6507 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
3050 6508 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
3051 6509 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
3052 6510 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
3053 6511 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
3054 6512 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
3055 6513 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
3056 6514 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
3057 6515 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
3058 6516 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
3059 6517 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
3060 6518 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
3061 6519 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
3062 6520 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
3063 6521 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
3064 6522 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
3065 6523 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
3066 6524 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
3067 6525 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
3068 6526 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
3069 6527 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
3070 6528 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
3071 6529 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
3072 6530 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
3073 6531 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
3074 6532 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
3075 6533 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
3076 6534 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
3077 6535 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
3088 6546 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
3089 6547 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
3090 6548 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
3091 6549 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
3092 6550 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
3093 6551 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
3094 6552 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
3095 6553 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
3096 6554 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
3097 6555 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
3098 6556 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
3099 6557 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
3100 6558 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
3101 6559 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
3111 6569 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
3112 6570 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
3113 6571 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
3114 6572 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
3115 6573 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
3116 6574 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
3117 6575 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
3118 6576 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
3119 6577 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
3120 6578 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
3121 6579 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
3122 6580 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
3123 6581 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
3124 6582 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
3125 6583 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
3126 6584 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
3127 6585 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
3128 6586 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
3129 6587 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
3130 6588 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
3131 6589 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
3132 6590 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
3133 6591 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
3134 6592 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
3135 6593 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
3136 6594 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
3137 6595 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
3138 6596 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
3139 6597 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
3140 6598 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
3141 6599 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
3142 6600 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
3143 6601 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
3145 6603 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
3146 6604 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
3147 6605 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
3148 6606 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
3149 6607 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
3150 6608 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
3151 6609 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
3158 6616 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
3159 6617 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
3160 6618 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
3161 6619 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
3162 6620 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
3163 6621 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
3164 6622 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
3165 6623 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
3166 6624 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
3167 6625 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
3168 6626 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
3169 6627 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
3170 6628 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
3171 6629 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
3172 6630 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
3173 6631 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
3174 6632 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
3175 6633 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
3176 6634 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
3177 6635 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
3178 6636 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
3179 6637 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
3180 6638 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
3181 6639 0.179020 TGCACTGGGTCTGTCCTTTG 60.179 55.000 0.00 0.00 36.25 2.77
3182 6640 0.179018 GCACTGGGTCTGTCCTTTGT 60.179 55.000 0.00 0.00 36.25 2.83
3183 6641 1.884235 CACTGGGTCTGTCCTTTGTC 58.116 55.000 0.00 0.00 36.25 3.18
3184 6642 0.765510 ACTGGGTCTGTCCTTTGTCC 59.234 55.000 0.00 0.00 36.25 4.02
3185 6643 1.059913 CTGGGTCTGTCCTTTGTCCT 58.940 55.000 0.00 0.00 36.25 3.85
3186 6644 2.257207 CTGGGTCTGTCCTTTGTCCTA 58.743 52.381 0.00 0.00 36.25 2.94
3220 6678 5.717178 GGATAGCTGAATGTATCTCCCACTA 59.283 44.000 0.00 0.00 0.00 2.74
3223 6681 6.107901 AGCTGAATGTATCTCCCACTATTC 57.892 41.667 0.00 0.00 0.00 1.75
3289 6748 0.318441 CAACTCCAGCAGAACGAGGA 59.682 55.000 0.00 0.00 0.00 3.71
3290 6749 1.048601 AACTCCAGCAGAACGAGGAA 58.951 50.000 0.00 0.00 0.00 3.36
3291 6750 0.605589 ACTCCAGCAGAACGAGGAAG 59.394 55.000 0.00 0.00 0.00 3.46
3292 6751 0.108424 CTCCAGCAGAACGAGGAAGG 60.108 60.000 0.00 0.00 0.00 3.46
3293 6752 1.078848 CCAGCAGAACGAGGAAGGG 60.079 63.158 0.00 0.00 0.00 3.95
3294 6753 1.674057 CAGCAGAACGAGGAAGGGT 59.326 57.895 0.00 0.00 0.00 4.34
3295 6754 0.895530 CAGCAGAACGAGGAAGGGTA 59.104 55.000 0.00 0.00 0.00 3.69
3296 6755 1.482593 CAGCAGAACGAGGAAGGGTAT 59.517 52.381 0.00 0.00 0.00 2.73
3297 6756 2.693591 CAGCAGAACGAGGAAGGGTATA 59.306 50.000 0.00 0.00 0.00 1.47
3298 6757 3.322254 CAGCAGAACGAGGAAGGGTATAT 59.678 47.826 0.00 0.00 0.00 0.86
3299 6758 3.574826 AGCAGAACGAGGAAGGGTATATC 59.425 47.826 0.00 0.00 0.00 1.63
3300 6759 3.321111 GCAGAACGAGGAAGGGTATATCA 59.679 47.826 0.00 0.00 0.00 2.15
3301 6760 4.021016 GCAGAACGAGGAAGGGTATATCAT 60.021 45.833 0.00 0.00 0.00 2.45
3302 6761 5.511545 GCAGAACGAGGAAGGGTATATCATT 60.512 44.000 0.00 0.00 0.00 2.57
3303 6762 6.525629 CAGAACGAGGAAGGGTATATCATTT 58.474 40.000 0.00 0.00 0.00 2.32
3304 6763 6.992715 CAGAACGAGGAAGGGTATATCATTTT 59.007 38.462 0.00 0.00 0.00 1.82
3305 6764 8.148351 CAGAACGAGGAAGGGTATATCATTTTA 58.852 37.037 0.00 0.00 0.00 1.52
3306 6765 8.368668 AGAACGAGGAAGGGTATATCATTTTAG 58.631 37.037 0.00 0.00 0.00 1.85
3307 6766 7.005709 ACGAGGAAGGGTATATCATTTTAGG 57.994 40.000 0.00 0.00 0.00 2.69
3308 6767 5.875359 CGAGGAAGGGTATATCATTTTAGGC 59.125 44.000 0.00 0.00 0.00 3.93
3309 6768 5.805728 AGGAAGGGTATATCATTTTAGGCG 58.194 41.667 0.00 0.00 0.00 5.52
3310 6769 5.546499 AGGAAGGGTATATCATTTTAGGCGA 59.454 40.000 0.00 0.00 0.00 5.54
3404 7881 5.540400 AATAATGCCATGACCATTGGAAG 57.460 39.130 10.37 0.00 34.87 3.46
3413 7890 4.299586 TGACCATTGGAAGCTCATGTTA 57.700 40.909 10.37 0.00 0.00 2.41
3416 7893 3.440173 ACCATTGGAAGCTCATGTTAACG 59.560 43.478 10.37 0.00 0.00 3.18
3443 7920 2.329267 TCGAATCCATGCAGGGATACT 58.671 47.619 31.63 18.43 46.96 2.12
3453 7930 2.806945 CAGGGATACTGGGAAAGCAA 57.193 50.000 0.00 0.00 43.70 3.91
3457 7934 2.026262 GGGATACTGGGAAAGCAACAGA 60.026 50.000 0.00 0.00 36.17 3.41
3472 7979 2.942376 CAACAGACACACTTACCTGCAA 59.058 45.455 0.00 0.00 0.00 4.08
3483 7990 4.999950 CACTTACCTGCAAAGATTCAGAGT 59.000 41.667 3.66 0.00 32.26 3.24
3489 7996 3.141398 TGCAAAGATTCAGAGTCCACAC 58.859 45.455 0.00 0.00 0.00 3.82
3490 7997 3.141398 GCAAAGATTCAGAGTCCACACA 58.859 45.455 0.00 0.00 0.00 3.72
3491 7998 3.755378 GCAAAGATTCAGAGTCCACACAT 59.245 43.478 0.00 0.00 0.00 3.21
3492 7999 4.937620 GCAAAGATTCAGAGTCCACACATA 59.062 41.667 0.00 0.00 0.00 2.29
3493 8000 5.587844 GCAAAGATTCAGAGTCCACACATAT 59.412 40.000 0.00 0.00 0.00 1.78
3494 8001 6.457934 GCAAAGATTCAGAGTCCACACATATG 60.458 42.308 0.00 0.00 0.00 1.78
3495 8002 6.550938 AAGATTCAGAGTCCACACATATGA 57.449 37.500 10.38 0.00 0.00 2.15
3496 8003 6.550938 AGATTCAGAGTCCACACATATGAA 57.449 37.500 10.38 0.00 0.00 2.57
3497 8004 7.134362 AGATTCAGAGTCCACACATATGAAT 57.866 36.000 10.38 0.00 35.53 2.57
3498 8005 7.571919 AGATTCAGAGTCCACACATATGAATT 58.428 34.615 10.38 0.00 34.17 2.17
3499 8006 7.714377 AGATTCAGAGTCCACACATATGAATTC 59.286 37.037 10.38 0.00 34.17 2.17
3500 8007 6.298441 TCAGAGTCCACACATATGAATTCA 57.702 37.500 11.26 11.26 0.00 2.57
3501 8008 6.343703 TCAGAGTCCACACATATGAATTCAG 58.656 40.000 14.54 2.96 0.00 3.02
3502 8009 6.155049 TCAGAGTCCACACATATGAATTCAGA 59.845 38.462 14.54 10.02 0.00 3.27
3503 8010 6.479331 CAGAGTCCACACATATGAATTCAGAG 59.521 42.308 14.54 8.44 0.00 3.35
3504 8011 5.121811 AGTCCACACATATGAATTCAGAGC 58.878 41.667 14.54 0.00 0.00 4.09
3505 8012 4.877823 GTCCACACATATGAATTCAGAGCA 59.122 41.667 14.54 0.00 0.00 4.26
3506 8013 5.355071 GTCCACACATATGAATTCAGAGCAA 59.645 40.000 14.54 0.00 0.00 3.91
3507 8014 5.355071 TCCACACATATGAATTCAGAGCAAC 59.645 40.000 14.54 0.00 0.00 4.17
3508 8015 5.124297 CCACACATATGAATTCAGAGCAACA 59.876 40.000 14.54 0.00 0.00 3.33
3509 8016 6.255950 CACACATATGAATTCAGAGCAACAG 58.744 40.000 14.54 1.97 0.00 3.16
3510 8017 6.093082 CACACATATGAATTCAGAGCAACAGA 59.907 38.462 14.54 0.00 0.00 3.41
3511 8018 6.093219 ACACATATGAATTCAGAGCAACAGAC 59.907 38.462 14.54 0.00 0.00 3.51
3512 8019 6.093082 CACATATGAATTCAGAGCAACAGACA 59.907 38.462 14.54 0.00 0.00 3.41
3513 8020 6.656270 ACATATGAATTCAGAGCAACAGACAA 59.344 34.615 14.54 0.00 0.00 3.18
3514 8021 7.175467 ACATATGAATTCAGAGCAACAGACAAA 59.825 33.333 14.54 0.00 0.00 2.83
3515 8022 5.173774 TGAATTCAGAGCAACAGACAAAC 57.826 39.130 3.38 0.00 0.00 2.93
3516 8023 4.883585 TGAATTCAGAGCAACAGACAAACT 59.116 37.500 3.38 0.00 0.00 2.66
3517 8024 5.357878 TGAATTCAGAGCAACAGACAAACTT 59.642 36.000 3.38 0.00 0.00 2.66
3518 8025 5.841957 ATTCAGAGCAACAGACAAACTTT 57.158 34.783 0.00 0.00 0.00 2.66
3519 8026 6.942532 ATTCAGAGCAACAGACAAACTTTA 57.057 33.333 0.00 0.00 0.00 1.85
3520 8027 5.734855 TCAGAGCAACAGACAAACTTTAC 57.265 39.130 0.00 0.00 0.00 2.01
3521 8028 5.428253 TCAGAGCAACAGACAAACTTTACT 58.572 37.500 0.00 0.00 0.00 2.24
3522 8029 6.578944 TCAGAGCAACAGACAAACTTTACTA 58.421 36.000 0.00 0.00 0.00 1.82
3523 8030 7.217200 TCAGAGCAACAGACAAACTTTACTAT 58.783 34.615 0.00 0.00 0.00 2.12
3524 8031 7.715249 TCAGAGCAACAGACAAACTTTACTATT 59.285 33.333 0.00 0.00 0.00 1.73
3525 8032 8.345565 CAGAGCAACAGACAAACTTTACTATTT 58.654 33.333 0.00 0.00 0.00 1.40
3526 8033 8.903820 AGAGCAACAGACAAACTTTACTATTTT 58.096 29.630 0.00 0.00 0.00 1.82
3527 8034 8.856490 AGCAACAGACAAACTTTACTATTTTG 57.144 30.769 0.00 0.00 36.49 2.44
3528 8035 8.682710 AGCAACAGACAAACTTTACTATTTTGA 58.317 29.630 0.52 0.00 34.84 2.69
3529 8036 8.958043 GCAACAGACAAACTTTACTATTTTGAG 58.042 33.333 0.52 0.00 34.84 3.02
3600 8119 1.134401 AGATGTACACTTCATGGCGGG 60.134 52.381 0.00 0.00 0.00 6.13
3659 8179 0.956633 CTGTCCTTTGTGCAGTGCAT 59.043 50.000 22.87 0.00 41.91 3.96
3661 8181 0.670162 GTCCTTTGTGCAGTGCATGT 59.330 50.000 22.87 0.00 41.91 3.21
3664 8184 2.954989 TCCTTTGTGCAGTGCATGTAAA 59.045 40.909 22.87 19.81 41.91 2.01
3666 8186 3.676172 CCTTTGTGCAGTGCATGTAAATG 59.324 43.478 22.87 14.98 41.91 2.32
3667 8187 4.548494 CTTTGTGCAGTGCATGTAAATGA 58.452 39.130 22.87 2.32 41.91 2.57
3668 8188 3.557577 TGTGCAGTGCATGTAAATGAC 57.442 42.857 22.87 5.31 41.91 3.06
3669 8189 3.148412 TGTGCAGTGCATGTAAATGACT 58.852 40.909 22.87 0.00 41.91 3.41
3670 8190 3.058085 TGTGCAGTGCATGTAAATGACTG 60.058 43.478 22.87 15.63 41.91 3.51
3671 8191 3.058016 GTGCAGTGCATGTAAATGACTGT 60.058 43.478 22.87 0.00 41.91 3.55
3672 8192 3.189080 TGCAGTGCATGTAAATGACTGTC 59.811 43.478 15.37 0.00 34.84 3.51
3673 8193 3.189080 GCAGTGCATGTAAATGACTGTCA 59.811 43.478 13.60 13.60 34.84 3.58
3674 8194 4.670992 GCAGTGCATGTAAATGACTGTCAG 60.671 45.833 16.46 0.00 34.84 3.51
3675 8195 3.438087 AGTGCATGTAAATGACTGTCAGC 59.562 43.478 16.46 12.01 0.00 4.26
3676 8196 3.438087 GTGCATGTAAATGACTGTCAGCT 59.562 43.478 16.46 7.99 0.00 4.24
3677 8197 4.074259 TGCATGTAAATGACTGTCAGCTT 58.926 39.130 16.46 13.49 0.00 3.74
3678 8198 4.520111 TGCATGTAAATGACTGTCAGCTTT 59.480 37.500 16.46 14.17 0.00 3.51
3679 8199 5.009911 TGCATGTAAATGACTGTCAGCTTTT 59.990 36.000 16.46 13.52 0.00 2.27
3680 8200 6.206438 TGCATGTAAATGACTGTCAGCTTTTA 59.794 34.615 16.46 12.59 0.00 1.52
3681 8201 7.083858 GCATGTAAATGACTGTCAGCTTTTAA 58.916 34.615 16.46 5.44 0.00 1.52
3682 8202 7.756722 GCATGTAAATGACTGTCAGCTTTTAAT 59.243 33.333 16.46 7.21 0.00 1.40
3712 8247 0.823460 GGCTACTCTGCTCTGCTCTT 59.177 55.000 0.00 0.00 0.00 2.85
3773 8309 7.371126 TGCATTTTTCCTTTTTCTTTTTCGT 57.629 28.000 0.00 0.00 0.00 3.85
3807 8343 5.689819 CGTTGGTTCTCTGAAAAACTATGG 58.310 41.667 3.51 0.00 0.00 2.74
3895 8433 2.533266 TGACTGTCAGAAAGTGGAGC 57.467 50.000 6.36 0.00 0.00 4.70
3897 8435 3.230976 TGACTGTCAGAAAGTGGAGCTA 58.769 45.455 6.36 0.00 0.00 3.32
3959 8503 9.367160 TCATAGGAATTCAGAGTGATGTATACA 57.633 33.333 8.27 8.27 0.00 2.29
3974 8519 7.120579 GTGATGTATACAGGACCAAACAAATGA 59.879 37.037 11.91 0.00 0.00 2.57
3989 8534 2.621998 CAAATGATGGTGAGATCCTGGC 59.378 50.000 0.00 0.00 0.00 4.85
3990 8535 1.817087 ATGATGGTGAGATCCTGGCT 58.183 50.000 0.00 0.00 0.00 4.75
3991 8536 2.477104 TGATGGTGAGATCCTGGCTA 57.523 50.000 0.00 0.00 0.00 3.93
3993 8538 3.114606 TGATGGTGAGATCCTGGCTAAA 58.885 45.455 0.00 0.00 0.00 1.85
3994 8539 3.718434 TGATGGTGAGATCCTGGCTAAAT 59.282 43.478 0.00 0.00 0.00 1.40
3996 8541 5.549228 TGATGGTGAGATCCTGGCTAAATAT 59.451 40.000 0.00 0.00 0.00 1.28
3999 8544 4.006319 GTGAGATCCTGGCTAAATATGGC 58.994 47.826 0.00 0.00 0.00 4.40
4010 8555 4.298332 GCTAAATATGGCCAAAATCGTGG 58.702 43.478 10.96 2.10 42.05 4.94
4011 8556 3.817709 AAATATGGCCAAAATCGTGGG 57.182 42.857 10.96 0.00 39.26 4.61
4012 8557 2.452600 ATATGGCCAAAATCGTGGGT 57.547 45.000 10.96 0.00 39.26 4.51
4013 8558 3.586470 ATATGGCCAAAATCGTGGGTA 57.414 42.857 10.96 0.00 39.26 3.69
4014 8559 2.223803 ATGGCCAAAATCGTGGGTAA 57.776 45.000 10.96 0.00 39.26 2.85
4015 8560 1.996798 TGGCCAAAATCGTGGGTAAA 58.003 45.000 0.61 0.00 39.26 2.01
4016 8561 1.614413 TGGCCAAAATCGTGGGTAAAC 59.386 47.619 0.61 0.00 39.26 2.01
4018 8563 1.971792 CCAAAATCGTGGGTAAACGC 58.028 50.000 0.00 0.00 43.26 4.84
4019 8564 1.267261 CCAAAATCGTGGGTAAACGCA 59.733 47.619 0.00 0.00 43.26 5.24
4021 8566 3.570559 CAAAATCGTGGGTAAACGCATT 58.429 40.909 3.02 0.00 43.26 3.56
4023 8568 1.816074 ATCGTGGGTAAACGCATTGT 58.184 45.000 3.02 0.00 43.26 2.71
4024 8569 2.452295 TCGTGGGTAAACGCATTGTA 57.548 45.000 3.02 0.00 43.26 2.41
4025 8570 2.975266 TCGTGGGTAAACGCATTGTAT 58.025 42.857 3.02 0.00 43.26 2.29
4026 8571 4.120792 TCGTGGGTAAACGCATTGTATA 57.879 40.909 3.02 0.00 43.26 1.47
4037 8755 3.433274 ACGCATTGTATATGAGCCAATCG 59.567 43.478 0.00 0.00 0.00 3.34
4055 8773 6.590357 CCAATCGAACGGATGTATATCAAAC 58.410 40.000 1.63 0.00 34.93 2.93
4062 8780 3.675225 CGGATGTATATCAAACAGAGGCG 59.325 47.826 1.63 0.00 34.90 5.52
4084 8802 5.733091 GCGTCATATTATTTTGCCTTGCTCA 60.733 40.000 0.00 0.00 0.00 4.26
4089 8807 9.353431 TCATATTATTTTGCCTTGCTCAATCTA 57.647 29.630 0.00 0.00 0.00 1.98
4100 8818 3.282021 TGCTCAATCTAAATGTCTGCCC 58.718 45.455 0.00 0.00 0.00 5.36
4101 8819 3.054139 TGCTCAATCTAAATGTCTGCCCT 60.054 43.478 0.00 0.00 0.00 5.19
4102 8820 3.314635 GCTCAATCTAAATGTCTGCCCTG 59.685 47.826 0.00 0.00 0.00 4.45
4103 8821 4.521146 CTCAATCTAAATGTCTGCCCTGT 58.479 43.478 0.00 0.00 0.00 4.00
4104 8822 4.517285 TCAATCTAAATGTCTGCCCTGTC 58.483 43.478 0.00 0.00 0.00 3.51
4138 8856 0.615331 CTGTATCCACACCACCTGCT 59.385 55.000 0.00 0.00 0.00 4.24
4139 8857 0.324614 TGTATCCACACCACCTGCTG 59.675 55.000 0.00 0.00 0.00 4.41
4140 8858 1.026718 GTATCCACACCACCTGCTGC 61.027 60.000 0.00 0.00 0.00 5.25
4141 8859 1.200760 TATCCACACCACCTGCTGCT 61.201 55.000 0.00 0.00 0.00 4.24
4142 8860 2.475371 ATCCACACCACCTGCTGCTC 62.475 60.000 0.00 0.00 0.00 4.26
4143 8861 2.670934 CACACCACCTGCTGCTCC 60.671 66.667 0.00 0.00 0.00 4.70
4144 8862 2.851102 ACACCACCTGCTGCTCCT 60.851 61.111 0.00 0.00 0.00 3.69
4145 8863 2.046507 CACCACCTGCTGCTCCTC 60.047 66.667 0.00 0.00 0.00 3.71
4146 8864 3.699894 ACCACCTGCTGCTCCTCG 61.700 66.667 0.00 0.00 0.00 4.63
4147 8865 4.463879 CCACCTGCTGCTCCTCGG 62.464 72.222 0.00 0.00 0.00 4.63
4148 8866 3.699894 CACCTGCTGCTCCTCGGT 61.700 66.667 0.00 0.00 0.00 4.69
4149 8867 3.386237 ACCTGCTGCTCCTCGGTC 61.386 66.667 0.00 0.00 0.00 4.79
4150 8868 3.385384 CCTGCTGCTCCTCGGTCA 61.385 66.667 0.00 0.00 0.00 4.02
4151 8869 2.659016 CTGCTGCTCCTCGGTCAA 59.341 61.111 0.00 0.00 0.00 3.18
4152 8870 1.739562 CTGCTGCTCCTCGGTCAAC 60.740 63.158 0.00 0.00 0.00 3.18
4153 8871 2.435059 GCTGCTCCTCGGTCAACC 60.435 66.667 0.00 0.00 0.00 3.77
4154 8872 3.059982 CTGCTCCTCGGTCAACCA 58.940 61.111 0.00 0.00 35.14 3.67
4155 8873 1.599047 CTGCTCCTCGGTCAACCAT 59.401 57.895 0.00 0.00 35.14 3.55
4156 8874 0.460987 CTGCTCCTCGGTCAACCATC 60.461 60.000 0.00 0.00 35.14 3.51
4157 8875 1.153349 GCTCCTCGGTCAACCATCC 60.153 63.158 0.00 0.00 35.14 3.51
4158 8876 1.522569 CTCCTCGGTCAACCATCCC 59.477 63.158 0.00 0.00 35.14 3.85
4159 8877 2.186903 CCTCGGTCAACCATCCCG 59.813 66.667 0.00 0.00 43.03 5.14
4160 8878 2.656069 CCTCGGTCAACCATCCCGT 61.656 63.158 0.00 0.00 42.30 5.28
4161 8879 1.447838 CTCGGTCAACCATCCCGTG 60.448 63.158 0.00 0.00 42.30 4.94
4162 8880 2.167398 CTCGGTCAACCATCCCGTGT 62.167 60.000 0.00 0.00 42.30 4.49
4163 8881 1.740296 CGGTCAACCATCCCGTGTC 60.740 63.158 0.00 0.00 37.00 3.67
4164 8882 1.677552 GGTCAACCATCCCGTGTCT 59.322 57.895 0.00 0.00 35.64 3.41
4165 8883 0.673644 GGTCAACCATCCCGTGTCTG 60.674 60.000 0.00 0.00 35.64 3.51
4166 8884 0.320374 GTCAACCATCCCGTGTCTGA 59.680 55.000 0.00 0.00 0.00 3.27
4167 8885 1.052617 TCAACCATCCCGTGTCTGAA 58.947 50.000 0.00 0.00 0.00 3.02
4168 8886 1.001974 TCAACCATCCCGTGTCTGAAG 59.998 52.381 0.00 0.00 0.00 3.02
4169 8887 1.056660 AACCATCCCGTGTCTGAAGT 58.943 50.000 0.00 0.00 0.00 3.01
4170 8888 1.056660 ACCATCCCGTGTCTGAAGTT 58.943 50.000 0.00 0.00 0.00 2.66
4171 8889 2.253610 ACCATCCCGTGTCTGAAGTTA 58.746 47.619 0.00 0.00 0.00 2.24
4172 8890 2.028385 ACCATCCCGTGTCTGAAGTTAC 60.028 50.000 0.00 0.00 0.00 2.50
4173 8891 2.028476 CCATCCCGTGTCTGAAGTTACA 60.028 50.000 0.00 0.00 0.00 2.41
4174 8892 2.806608 TCCCGTGTCTGAAGTTACAC 57.193 50.000 0.00 0.00 42.04 2.90
4175 8893 1.342174 TCCCGTGTCTGAAGTTACACC 59.658 52.381 2.55 0.00 42.39 4.16
4176 8894 1.069513 CCCGTGTCTGAAGTTACACCA 59.930 52.381 2.55 0.00 42.39 4.17
4177 8895 2.404215 CCGTGTCTGAAGTTACACCAG 58.596 52.381 2.55 0.00 42.39 4.00
4178 8896 1.792949 CGTGTCTGAAGTTACACCAGC 59.207 52.381 2.55 0.00 42.39 4.85
4179 8897 1.792949 GTGTCTGAAGTTACACCAGCG 59.207 52.381 0.00 0.00 40.07 5.18
4180 8898 1.684450 TGTCTGAAGTTACACCAGCGA 59.316 47.619 0.00 0.00 0.00 4.93
4181 8899 2.059541 GTCTGAAGTTACACCAGCGAC 58.940 52.381 0.00 0.00 0.00 5.19
4182 8900 1.961394 TCTGAAGTTACACCAGCGACT 59.039 47.619 0.00 0.00 0.00 4.18
4183 8901 3.057736 GTCTGAAGTTACACCAGCGACTA 60.058 47.826 0.00 0.00 0.00 2.59
4184 8902 3.057736 TCTGAAGTTACACCAGCGACTAC 60.058 47.826 0.00 0.00 0.00 2.73
4185 8903 2.624364 TGAAGTTACACCAGCGACTACA 59.376 45.455 0.00 0.00 0.00 2.74
4186 8904 3.257375 TGAAGTTACACCAGCGACTACAT 59.743 43.478 0.00 0.00 0.00 2.29
4187 8905 3.232213 AGTTACACCAGCGACTACATG 57.768 47.619 0.00 0.00 0.00 3.21
4188 8906 1.659098 GTTACACCAGCGACTACATGC 59.341 52.381 0.00 0.00 0.00 4.06
4189 8907 0.174845 TACACCAGCGACTACATGCC 59.825 55.000 0.00 0.00 0.00 4.40
4190 8908 1.219124 CACCAGCGACTACATGCCT 59.781 57.895 0.00 0.00 0.00 4.75
4191 8909 0.459899 CACCAGCGACTACATGCCTA 59.540 55.000 0.00 0.00 0.00 3.93
4192 8910 0.460311 ACCAGCGACTACATGCCTAC 59.540 55.000 0.00 0.00 0.00 3.18
4193 8911 0.747255 CCAGCGACTACATGCCTACT 59.253 55.000 0.00 0.00 0.00 2.57
4194 8912 1.954382 CCAGCGACTACATGCCTACTA 59.046 52.381 0.00 0.00 0.00 1.82
4195 8913 2.030717 CCAGCGACTACATGCCTACTAG 60.031 54.545 0.00 0.00 0.00 2.57
4196 8914 2.619177 CAGCGACTACATGCCTACTAGT 59.381 50.000 0.00 0.00 0.00 2.57
4197 8915 3.066900 CAGCGACTACATGCCTACTAGTT 59.933 47.826 0.00 0.00 0.00 2.24
4198 8916 4.275196 CAGCGACTACATGCCTACTAGTTA 59.725 45.833 0.00 0.00 0.00 2.24
4199 8917 4.885907 AGCGACTACATGCCTACTAGTTAA 59.114 41.667 0.00 0.00 0.00 2.01
4200 8918 5.359009 AGCGACTACATGCCTACTAGTTAAA 59.641 40.000 0.00 0.00 0.00 1.52
4201 8919 6.038356 GCGACTACATGCCTACTAGTTAAAA 58.962 40.000 0.00 0.00 0.00 1.52
4202 8920 6.700520 GCGACTACATGCCTACTAGTTAAAAT 59.299 38.462 0.00 0.00 0.00 1.82
4203 8921 7.224167 GCGACTACATGCCTACTAGTTAAAATT 59.776 37.037 0.00 0.00 0.00 1.82
4204 8922 9.095065 CGACTACATGCCTACTAGTTAAAATTT 57.905 33.333 0.00 0.00 0.00 1.82
4206 8924 9.953565 ACTACATGCCTACTAGTTAAAATTTCA 57.046 29.630 0.00 0.00 0.00 2.69
4208 8926 8.051901 ACATGCCTACTAGTTAAAATTTCACC 57.948 34.615 0.00 0.00 0.00 4.02
4209 8927 7.668052 ACATGCCTACTAGTTAAAATTTCACCA 59.332 33.333 0.00 0.00 0.00 4.17
4210 8928 8.686334 CATGCCTACTAGTTAAAATTTCACCAT 58.314 33.333 0.00 0.00 0.00 3.55
4211 8929 9.914834 ATGCCTACTAGTTAAAATTTCACCATA 57.085 29.630 0.00 0.00 0.00 2.74
4212 8930 9.742144 TGCCTACTAGTTAAAATTTCACCATAA 57.258 29.630 0.00 0.00 0.00 1.90
4220 8938 9.008965 AGTTAAAATTTCACCATAAATTTGGGC 57.991 29.630 0.00 2.98 44.35 5.36
4221 8939 8.787852 GTTAAAATTTCACCATAAATTTGGGCA 58.212 29.630 0.00 0.00 44.35 5.36
4222 8940 7.830099 AAAATTTCACCATAAATTTGGGCAA 57.170 28.000 0.00 0.00 44.35 4.52
4223 8941 8.419922 AAAATTTCACCATAAATTTGGGCAAT 57.580 26.923 0.00 0.48 44.35 3.56
4224 8942 9.525826 AAAATTTCACCATAAATTTGGGCAATA 57.474 25.926 0.00 0.00 44.35 1.90
4225 8943 8.504812 AATTTCACCATAAATTTGGGCAATAC 57.495 30.769 0.00 0.00 41.35 1.89
4226 8944 5.255710 TCACCATAAATTTGGGCAATACG 57.744 39.130 0.00 0.00 41.35 3.06
4227 8945 4.707448 TCACCATAAATTTGGGCAATACGT 59.293 37.500 0.00 0.00 41.35 3.57
4228 8946 5.886474 TCACCATAAATTTGGGCAATACGTA 59.114 36.000 0.00 0.00 41.35 3.57
4229 8947 5.974751 CACCATAAATTTGGGCAATACGTAC 59.025 40.000 0.00 0.00 41.35 3.67
4230 8948 5.889289 ACCATAAATTTGGGCAATACGTACT 59.111 36.000 0.00 0.00 41.35 2.73
4231 8949 7.012515 CACCATAAATTTGGGCAATACGTACTA 59.987 37.037 0.00 0.00 41.35 1.82
4232 8950 7.227910 ACCATAAATTTGGGCAATACGTACTAG 59.772 37.037 0.00 0.00 41.35 2.57
4233 8951 7.227910 CCATAAATTTGGGCAATACGTACTAGT 59.772 37.037 0.00 0.00 32.80 2.57
4234 8952 6.673154 AAATTTGGGCAATACGTACTAGTC 57.327 37.500 0.00 0.00 0.00 2.59
4235 8953 5.609533 ATTTGGGCAATACGTACTAGTCT 57.390 39.130 0.00 0.00 0.00 3.24
4236 8954 6.720112 ATTTGGGCAATACGTACTAGTCTA 57.280 37.500 0.00 0.00 0.00 2.59
4237 8955 6.720112 TTTGGGCAATACGTACTAGTCTAT 57.280 37.500 0.00 0.00 0.00 1.98
4238 8956 6.720112 TTGGGCAATACGTACTAGTCTATT 57.280 37.500 0.00 0.00 0.00 1.73
4239 8957 6.080648 TGGGCAATACGTACTAGTCTATTG 57.919 41.667 16.53 16.53 0.00 1.90
4240 8958 5.010314 TGGGCAATACGTACTAGTCTATTGG 59.990 44.000 19.63 9.31 0.00 3.16
4241 8959 5.010415 GGGCAATACGTACTAGTCTATTGGT 59.990 44.000 19.63 7.40 0.00 3.67
4242 8960 6.148264 GGCAATACGTACTAGTCTATTGGTC 58.852 44.000 19.63 10.47 0.00 4.02
4243 8961 6.148264 GCAATACGTACTAGTCTATTGGTCC 58.852 44.000 19.63 8.05 0.00 4.46
4244 8962 6.675987 CAATACGTACTAGTCTATTGGTCCC 58.324 44.000 0.00 0.00 0.00 4.46
4245 8963 4.516652 ACGTACTAGTCTATTGGTCCCT 57.483 45.455 0.00 0.00 0.00 4.20
4246 8964 4.864726 ACGTACTAGTCTATTGGTCCCTT 58.135 43.478 0.00 0.00 0.00 3.95
4247 8965 5.267587 ACGTACTAGTCTATTGGTCCCTTT 58.732 41.667 0.00 0.00 0.00 3.11
4248 8966 5.126707 ACGTACTAGTCTATTGGTCCCTTTG 59.873 44.000 0.00 0.00 0.00 2.77
4249 8967 5.126707 CGTACTAGTCTATTGGTCCCTTTGT 59.873 44.000 0.00 0.00 0.00 2.83
4250 8968 6.319658 CGTACTAGTCTATTGGTCCCTTTGTA 59.680 42.308 0.00 0.00 0.00 2.41
4251 8969 7.014038 CGTACTAGTCTATTGGTCCCTTTGTAT 59.986 40.741 0.00 0.00 0.00 2.29
4252 8970 7.362802 ACTAGTCTATTGGTCCCTTTGTATC 57.637 40.000 0.00 0.00 0.00 2.24
4253 8971 7.133483 ACTAGTCTATTGGTCCCTTTGTATCT 58.867 38.462 0.00 0.00 0.00 1.98
4254 8972 6.893020 AGTCTATTGGTCCCTTTGTATCTT 57.107 37.500 0.00 0.00 0.00 2.40
4255 8973 6.653989 AGTCTATTGGTCCCTTTGTATCTTG 58.346 40.000 0.00 0.00 0.00 3.02
4256 8974 6.215636 AGTCTATTGGTCCCTTTGTATCTTGT 59.784 38.462 0.00 0.00 0.00 3.16
4257 8975 6.539103 GTCTATTGGTCCCTTTGTATCTTGTC 59.461 42.308 0.00 0.00 0.00 3.18
4258 8976 4.993705 TTGGTCCCTTTGTATCTTGTCT 57.006 40.909 0.00 0.00 0.00 3.41
4259 8977 4.553330 TGGTCCCTTTGTATCTTGTCTC 57.447 45.455 0.00 0.00 0.00 3.36
4260 8978 3.907474 TGGTCCCTTTGTATCTTGTCTCA 59.093 43.478 0.00 0.00 0.00 3.27
4261 8979 4.349636 TGGTCCCTTTGTATCTTGTCTCAA 59.650 41.667 0.00 0.00 0.00 3.02
4262 8980 5.163141 TGGTCCCTTTGTATCTTGTCTCAAA 60.163 40.000 0.00 0.00 0.00 2.69
4263 8981 5.946377 GGTCCCTTTGTATCTTGTCTCAAAT 59.054 40.000 0.00 0.00 31.08 2.32
4264 8982 6.434340 GGTCCCTTTGTATCTTGTCTCAAATT 59.566 38.462 0.00 0.00 31.08 1.82
4265 8983 7.039714 GGTCCCTTTGTATCTTGTCTCAAATTT 60.040 37.037 0.00 0.00 31.08 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.746045 AGACTGAAACTTACGGCAAGA 57.254 42.857 6.09 0.00 37.71 3.02
207 369 7.191551 GTCCTGATGTTGATACATTGAACATG 58.808 38.462 0.00 0.00 44.90 3.21
211 373 4.875536 CGGTCCTGATGTTGATACATTGAA 59.124 41.667 0.00 0.00 44.90 2.69
622 818 4.572985 TCATGGTGAAACAAGCTTTCTG 57.427 40.909 0.00 0.00 39.98 3.02
773 972 5.822519 TGTATAGCTTGAATAAGGGCAACAG 59.177 40.000 0.00 0.00 39.74 3.16
840 1043 2.972625 TCCTTTAGCACATCAACCTCG 58.027 47.619 0.00 0.00 0.00 4.63
1103 1309 5.133221 ACACAATTTCACCAAGACTTAGCT 58.867 37.500 0.00 0.00 0.00 3.32
1381 3959 3.217681 TCCCACACCTTTGGTTTCTAC 57.782 47.619 0.00 0.00 34.44 2.59
1501 4079 5.535333 CAAAAGACGTAGACTTGGGAAGTA 58.465 41.667 0.00 0.00 42.35 2.24
1575 4153 3.282021 TGCCAAATATCTCAGGTGCTTC 58.718 45.455 0.00 0.00 0.00 3.86
1582 4160 7.718753 AGTCCTCTTTAATGCCAAATATCTCAG 59.281 37.037 0.00 0.00 0.00 3.35
1798 4376 2.378547 AGGCTGGAAACCCAAATAGTGA 59.621 45.455 0.00 0.00 32.40 3.41
1857 4435 5.694995 AGTTCATTGAGTTGGGAAAGAGAA 58.305 37.500 0.00 0.00 0.00 2.87
1921 4499 5.479893 GCATTTAGCCTTGCCTTTGCAGA 62.480 47.826 0.00 0.00 43.02 4.26
1979 4557 1.295292 ACCCATCTCCCACTCTACCAT 59.705 52.381 0.00 0.00 0.00 3.55
2059 4637 2.194859 AGGATGAGGACAGAGCACATT 58.805 47.619 0.00 0.00 0.00 2.71
2076 4654 6.403527 CGATGTTGATTTGTTCTATGCAAGGA 60.404 38.462 0.00 0.00 0.00 3.36
2103 4681 0.586802 GCCGGCGACCAAAATATCTC 59.413 55.000 12.58 0.00 0.00 2.75
2469 5053 0.750850 TAAGTCCAGGAGGCATACGC 59.249 55.000 0.00 0.00 37.44 4.42
2481 5065 4.201657 CCATTGCATGAGACATAAGTCCA 58.798 43.478 0.00 0.00 46.15 4.02
2556 5990 5.006358 GTCGAGCTCAACTACAGAAACAAAA 59.994 40.000 15.40 0.00 0.00 2.44
2603 6037 5.184671 AGTTTTGGAAGATTGGAGATCTTGC 59.815 40.000 11.75 11.75 43.77 4.01
2626 6078 7.324616 GCAGTACTTGATTTGAAGCTTTTGTAG 59.675 37.037 0.00 0.00 0.00 2.74
2638 6090 3.256631 AGCTTTGGGCAGTACTTGATTTG 59.743 43.478 0.00 0.00 44.79 2.32
2798 6250 1.588239 AGATTCACCCTCAGCCATGA 58.412 50.000 0.00 0.00 0.00 3.07
2831 6283 7.164826 CGACTTGCTTAATATGATTGAACTTGC 59.835 37.037 0.00 0.00 0.00 4.01
2840 6292 5.220710 AGCCTCGACTTGCTTAATATGAT 57.779 39.130 0.00 0.00 32.94 2.45
2956 6408 5.062809 GCTAGATTGAAACAAAGAGAGACCG 59.937 44.000 0.00 0.00 0.00 4.79
2993 6451 8.637986 GCCCTCTATCCTATATCAACTAGATTG 58.362 40.741 0.00 0.00 38.19 2.67
2994 6452 8.347591 TGCCCTCTATCCTATATCAACTAGATT 58.652 37.037 0.00 0.00 38.19 2.40
2995 6453 7.888105 TGCCCTCTATCCTATATCAACTAGAT 58.112 38.462 0.00 0.00 40.86 1.98
2998 6456 6.436027 CCTGCCCTCTATCCTATATCAACTA 58.564 44.000 0.00 0.00 0.00 2.24
3000 6458 4.141824 GCCTGCCCTCTATCCTATATCAAC 60.142 50.000 0.00 0.00 0.00 3.18
3001 6459 4.033709 GCCTGCCCTCTATCCTATATCAA 58.966 47.826 0.00 0.00 0.00 2.57
3003 6461 2.969262 GGCCTGCCCTCTATCCTATATC 59.031 54.545 0.00 0.00 0.00 1.63
3006 6464 0.796255 AGGCCTGCCCTCTATCCTAT 59.204 55.000 3.11 0.00 41.21 2.57
3008 6466 1.461075 CAGGCCTGCCCTCTATCCT 60.461 63.158 22.33 0.00 44.09 3.24
3009 6467 2.524204 CCAGGCCTGCCCTCTATCC 61.524 68.421 28.39 0.00 44.09 2.59
3011 6469 3.174265 GCCAGGCCTGCCCTCTAT 61.174 66.667 28.39 0.00 44.09 1.98
3023 6481 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
3024 6482 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
3025 6483 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
3026 6484 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
3027 6485 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
3028 6486 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
3029 6487 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
3035 6493 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
3037 6495 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
3039 6497 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
3040 6498 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
3041 6499 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
3052 6510 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
3053 6511 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
3054 6512 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
3055 6513 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
3056 6514 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
3057 6515 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
3058 6516 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
3059 6517 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
3060 6518 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
3061 6519 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
3070 6528 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
3071 6529 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
3072 6530 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
3073 6531 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
3074 6532 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
3075 6533 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
3076 6534 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
3077 6535 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
3079 6537 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
3080 6538 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
3081 6539 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
3082 6540 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
3093 6551 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
3094 6552 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
3095 6553 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
3096 6554 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
3097 6555 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
3098 6556 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
3099 6557 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
3100 6558 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
3101 6559 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
3102 6560 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
3103 6561 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
3104 6562 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
3105 6563 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
3106 6564 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
3107 6565 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
3108 6566 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
3109 6567 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
3110 6568 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
3111 6569 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
3112 6570 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
3113 6571 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
3114 6572 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
3115 6573 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
3116 6574 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
3117 6575 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
3118 6576 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
3119 6577 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
3120 6578 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
3121 6579 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
3122 6580 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
3123 6581 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
3124 6582 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
3125 6583 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
3126 6584 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
3128 6586 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
3129 6587 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
3130 6588 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
3131 6589 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
3132 6590 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
3133 6591 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
3134 6592 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
3142 6600 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
3143 6601 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
3144 6602 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
3145 6603 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
3146 6604 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
3147 6605 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
3148 6606 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
3149 6607 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
3150 6608 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
3151 6609 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
3152 6610 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
3153 6611 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
3154 6612 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
3155 6613 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
3156 6614 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
3157 6615 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
3158 6616 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
3159 6617 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
3160 6618 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
3161 6619 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
3162 6620 0.179020 CAAAGGACAGACCCAGTGCA 60.179 55.000 0.00 0.00 40.05 4.57
3163 6621 0.179018 ACAAAGGACAGACCCAGTGC 60.179 55.000 0.00 0.00 40.05 4.40
3164 6622 1.543429 GGACAAAGGACAGACCCAGTG 60.543 57.143 0.00 0.00 40.05 3.66
3165 6623 0.765510 GGACAAAGGACAGACCCAGT 59.234 55.000 0.00 0.00 40.05 4.00
3166 6624 1.059913 AGGACAAAGGACAGACCCAG 58.940 55.000 0.00 0.00 40.05 4.45
3167 6625 2.257207 CTAGGACAAAGGACAGACCCA 58.743 52.381 0.00 0.00 40.05 4.51
3168 6626 2.258109 ACTAGGACAAAGGACAGACCC 58.742 52.381 0.00 0.00 40.05 4.46
3169 6627 3.323979 TCAACTAGGACAAAGGACAGACC 59.676 47.826 0.00 0.00 39.35 3.85
3170 6628 4.602340 TCAACTAGGACAAAGGACAGAC 57.398 45.455 0.00 0.00 0.00 3.51
3171 6629 7.287927 CCTATATCAACTAGGACAAAGGACAGA 59.712 40.741 0.00 0.00 38.44 3.41
3172 6630 7.287927 TCCTATATCAACTAGGACAAAGGACAG 59.712 40.741 0.00 0.00 39.84 3.51
3173 6631 7.130099 TCCTATATCAACTAGGACAAAGGACA 58.870 38.462 0.00 0.00 39.84 4.02
3174 6632 7.598759 TCCTATATCAACTAGGACAAAGGAC 57.401 40.000 0.00 0.00 39.84 3.85
3175 6633 9.535170 CTATCCTATATCAACTAGGACAAAGGA 57.465 37.037 1.32 0.00 45.72 3.36
3176 6634 8.254508 GCTATCCTATATCAACTAGGACAAAGG 58.745 40.741 1.32 0.00 45.72 3.11
3177 6635 9.030452 AGCTATCCTATATCAACTAGGACAAAG 57.970 37.037 1.32 2.28 45.72 2.77
3178 6636 8.807118 CAGCTATCCTATATCAACTAGGACAAA 58.193 37.037 1.32 0.00 45.72 2.83
3179 6637 8.170730 TCAGCTATCCTATATCAACTAGGACAA 58.829 37.037 1.32 0.00 45.72 3.18
3180 6638 7.699878 TCAGCTATCCTATATCAACTAGGACA 58.300 38.462 1.32 0.00 45.72 4.02
3181 6639 8.582657 TTCAGCTATCCTATATCAACTAGGAC 57.417 38.462 1.32 0.00 45.72 3.85
3182 6640 9.194972 CATTCAGCTATCCTATATCAACTAGGA 57.805 37.037 1.78 1.78 46.66 2.94
3183 6641 8.976353 ACATTCAGCTATCCTATATCAACTAGG 58.024 37.037 0.00 0.00 37.66 3.02
3220 6678 1.345415 CCCTGGCAAGCAAAACAGAAT 59.655 47.619 0.00 0.00 32.86 2.40
3223 6681 0.032540 GACCCTGGCAAGCAAAACAG 59.967 55.000 0.00 0.00 0.00 3.16
3289 6748 6.715264 CCTTTCGCCTAAAATGATATACCCTT 59.285 38.462 0.00 0.00 0.00 3.95
3290 6749 6.043938 TCCTTTCGCCTAAAATGATATACCCT 59.956 38.462 0.00 0.00 0.00 4.34
3291 6750 6.148976 GTCCTTTCGCCTAAAATGATATACCC 59.851 42.308 0.00 0.00 0.00 3.69
3292 6751 6.148976 GGTCCTTTCGCCTAAAATGATATACC 59.851 42.308 0.00 0.00 0.00 2.73
3293 6752 6.708949 TGGTCCTTTCGCCTAAAATGATATAC 59.291 38.462 0.00 0.00 0.00 1.47
3294 6753 6.833041 TGGTCCTTTCGCCTAAAATGATATA 58.167 36.000 0.00 0.00 0.00 0.86
3295 6754 5.690865 TGGTCCTTTCGCCTAAAATGATAT 58.309 37.500 0.00 0.00 0.00 1.63
3296 6755 5.105567 TGGTCCTTTCGCCTAAAATGATA 57.894 39.130 0.00 0.00 0.00 2.15
3297 6756 3.963129 TGGTCCTTTCGCCTAAAATGAT 58.037 40.909 0.00 0.00 0.00 2.45
3298 6757 3.426787 TGGTCCTTTCGCCTAAAATGA 57.573 42.857 0.00 0.00 0.00 2.57
3299 6758 5.530915 TCATATGGTCCTTTCGCCTAAAATG 59.469 40.000 2.13 0.00 0.00 2.32
3300 6759 5.690865 TCATATGGTCCTTTCGCCTAAAAT 58.309 37.500 2.13 0.00 0.00 1.82
3301 6760 5.105567 TCATATGGTCCTTTCGCCTAAAA 57.894 39.130 2.13 0.00 0.00 1.52
3302 6761 4.764050 TCATATGGTCCTTTCGCCTAAA 57.236 40.909 2.13 0.00 0.00 1.85
3303 6762 4.641396 CATCATATGGTCCTTTCGCCTAA 58.359 43.478 2.13 0.00 0.00 2.69
3304 6763 3.557054 GCATCATATGGTCCTTTCGCCTA 60.557 47.826 2.13 0.00 0.00 3.93
3305 6764 2.811873 GCATCATATGGTCCTTTCGCCT 60.812 50.000 2.13 0.00 0.00 5.52
3306 6765 1.537202 GCATCATATGGTCCTTTCGCC 59.463 52.381 2.13 0.00 0.00 5.54
3307 6766 2.221169 TGCATCATATGGTCCTTTCGC 58.779 47.619 2.13 0.00 0.00 4.70
3308 6767 3.251729 CCTTGCATCATATGGTCCTTTCG 59.748 47.826 2.13 0.00 0.00 3.46
3309 6768 4.464008 TCCTTGCATCATATGGTCCTTTC 58.536 43.478 2.13 0.00 0.00 2.62
3310 6769 4.524802 TCCTTGCATCATATGGTCCTTT 57.475 40.909 2.13 0.00 0.00 3.11
3404 7881 3.796717 TCGATCATCACGTTAACATGAGC 59.203 43.478 10.44 10.70 30.15 4.26
3413 7890 2.545526 GCATGGATTCGATCATCACGTT 59.454 45.455 0.00 0.00 0.00 3.99
3416 7893 2.483106 CCTGCATGGATTCGATCATCAC 59.517 50.000 0.00 0.00 38.35 3.06
3443 7920 1.064758 AGTGTGTCTGTTGCTTTCCCA 60.065 47.619 0.00 0.00 0.00 4.37
3453 7930 3.118408 TCTTTGCAGGTAAGTGTGTCTGT 60.118 43.478 0.00 0.00 0.00 3.41
3457 7934 4.460263 TGAATCTTTGCAGGTAAGTGTGT 58.540 39.130 0.00 0.00 0.00 3.72
3472 7979 6.550938 TCATATGTGTGGACTCTGAATCTT 57.449 37.500 1.90 0.00 0.00 2.40
3483 7990 5.101648 TGCTCTGAATTCATATGTGTGGA 57.898 39.130 8.96 0.00 0.00 4.02
3489 7996 6.673154 TGTCTGTTGCTCTGAATTCATATG 57.327 37.500 8.96 0.00 0.00 1.78
3490 7997 7.392673 AGTTTGTCTGTTGCTCTGAATTCATAT 59.607 33.333 8.96 0.00 0.00 1.78
3491 7998 6.712095 AGTTTGTCTGTTGCTCTGAATTCATA 59.288 34.615 8.96 0.36 0.00 2.15
3492 7999 5.533903 AGTTTGTCTGTTGCTCTGAATTCAT 59.466 36.000 8.96 0.00 0.00 2.57
3493 8000 4.883585 AGTTTGTCTGTTGCTCTGAATTCA 59.116 37.500 8.12 8.12 0.00 2.57
3494 8001 5.429957 AGTTTGTCTGTTGCTCTGAATTC 57.570 39.130 0.00 0.00 0.00 2.17
3495 8002 5.841957 AAGTTTGTCTGTTGCTCTGAATT 57.158 34.783 0.00 0.00 0.00 2.17
3496 8003 5.841957 AAAGTTTGTCTGTTGCTCTGAAT 57.158 34.783 0.00 0.00 0.00 2.57
3497 8004 5.880332 AGTAAAGTTTGTCTGTTGCTCTGAA 59.120 36.000 0.00 0.00 0.00 3.02
3498 8005 5.428253 AGTAAAGTTTGTCTGTTGCTCTGA 58.572 37.500 0.00 0.00 0.00 3.27
3499 8006 5.741388 AGTAAAGTTTGTCTGTTGCTCTG 57.259 39.130 0.00 0.00 0.00 3.35
3500 8007 8.451908 AAATAGTAAAGTTTGTCTGTTGCTCT 57.548 30.769 0.00 0.00 0.00 4.09
3501 8008 8.958043 CAAAATAGTAAAGTTTGTCTGTTGCTC 58.042 33.333 0.00 0.00 0.00 4.26
3502 8009 8.682710 TCAAAATAGTAAAGTTTGTCTGTTGCT 58.317 29.630 0.00 0.00 34.55 3.91
3503 8010 8.850454 TCAAAATAGTAAAGTTTGTCTGTTGC 57.150 30.769 0.00 0.00 34.55 4.17
3531 8038 9.442047 CACACTTCTCAGGAAATTAGTAAGAAT 57.558 33.333 0.00 0.00 0.00 2.40
3532 8039 8.647796 TCACACTTCTCAGGAAATTAGTAAGAA 58.352 33.333 0.00 0.00 0.00 2.52
3533 8040 8.088981 GTCACACTTCTCAGGAAATTAGTAAGA 58.911 37.037 0.00 0.00 0.00 2.10
3534 8041 7.872993 TGTCACACTTCTCAGGAAATTAGTAAG 59.127 37.037 0.00 0.00 0.00 2.34
3535 8042 7.732025 TGTCACACTTCTCAGGAAATTAGTAA 58.268 34.615 0.00 0.00 0.00 2.24
3536 8043 7.297936 TGTCACACTTCTCAGGAAATTAGTA 57.702 36.000 0.00 0.00 0.00 1.82
3537 8044 6.174720 TGTCACACTTCTCAGGAAATTAGT 57.825 37.500 0.00 0.00 0.00 2.24
3578 8085 2.609459 CCGCCATGAAGTGTACATCTTC 59.391 50.000 21.48 21.48 40.89 2.87
3579 8086 2.632377 CCGCCATGAAGTGTACATCTT 58.368 47.619 0.00 4.61 0.00 2.40
3587 8094 0.107456 AGATAGCCCGCCATGAAGTG 59.893 55.000 0.00 0.00 0.00 3.16
3618 8137 3.897239 CCTTGCCAAGGTCACCATATTA 58.103 45.455 15.63 0.00 43.95 0.98
3659 8179 9.462174 CAAATTAAAAGCTGACAGTCATTTACA 57.538 29.630 2.97 0.00 0.00 2.41
3661 8181 8.855110 TCCAAATTAAAAGCTGACAGTCATTTA 58.145 29.630 2.97 3.85 0.00 1.40
3664 8184 6.491403 ACTCCAAATTAAAAGCTGACAGTCAT 59.509 34.615 2.97 0.00 0.00 3.06
3666 8186 6.319141 ACTCCAAATTAAAAGCTGACAGTC 57.681 37.500 3.99 0.00 0.00 3.51
3667 8187 6.715347 AACTCCAAATTAAAAGCTGACAGT 57.285 33.333 3.99 0.00 0.00 3.55
3668 8188 7.809806 CCTAAACTCCAAATTAAAAGCTGACAG 59.190 37.037 0.00 0.00 0.00 3.51
3669 8189 7.657336 CCTAAACTCCAAATTAAAAGCTGACA 58.343 34.615 0.00 0.00 0.00 3.58
3670 8190 6.586463 GCCTAAACTCCAAATTAAAAGCTGAC 59.414 38.462 0.00 0.00 0.00 3.51
3671 8191 6.493458 AGCCTAAACTCCAAATTAAAAGCTGA 59.507 34.615 0.00 0.00 0.00 4.26
3672 8192 6.691508 AGCCTAAACTCCAAATTAAAAGCTG 58.308 36.000 0.00 0.00 0.00 4.24
3673 8193 6.918067 AGCCTAAACTCCAAATTAAAAGCT 57.082 33.333 0.00 0.00 0.00 3.74
3674 8194 7.827701 AGTAGCCTAAACTCCAAATTAAAAGC 58.172 34.615 0.00 0.00 0.00 3.51
3675 8195 9.232473 AGAGTAGCCTAAACTCCAAATTAAAAG 57.768 33.333 0.00 0.00 43.64 2.27
3676 8196 9.010029 CAGAGTAGCCTAAACTCCAAATTAAAA 57.990 33.333 0.00 0.00 43.64 1.52
3677 8197 7.120726 GCAGAGTAGCCTAAACTCCAAATTAAA 59.879 37.037 0.00 0.00 43.64 1.52
3678 8198 6.598064 GCAGAGTAGCCTAAACTCCAAATTAA 59.402 38.462 0.00 0.00 43.64 1.40
3679 8199 6.070194 AGCAGAGTAGCCTAAACTCCAAATTA 60.070 38.462 0.00 0.00 43.64 1.40
3680 8200 4.944317 GCAGAGTAGCCTAAACTCCAAATT 59.056 41.667 0.00 0.00 43.64 1.82
3681 8201 4.226168 AGCAGAGTAGCCTAAACTCCAAAT 59.774 41.667 0.00 0.00 43.64 2.32
3682 8202 3.583086 AGCAGAGTAGCCTAAACTCCAAA 59.417 43.478 0.00 0.00 43.64 3.28
3712 8247 0.670162 GCAACCTGAGCTGCTTTCAA 59.330 50.000 2.53 0.00 35.62 2.69
3773 8309 1.077357 AACCAACGCAAGACACCCA 60.077 52.632 0.00 0.00 43.62 4.51
3814 8352 9.507329 ACCAGTATTGTATTGATTGATGTATCC 57.493 33.333 0.00 0.00 0.00 2.59
3866 8404 5.647658 ACTTTCTGACAGTCATTTGTGTTGA 59.352 36.000 2.97 0.00 0.00 3.18
3959 8503 3.828451 CTCACCATCATTTGTTTGGTCCT 59.172 43.478 5.38 0.00 41.77 3.85
3974 8519 5.280882 CCATATTTAGCCAGGATCTCACCAT 60.281 44.000 0.00 0.00 0.00 3.55
3989 8534 4.340950 ACCCACGATTTTGGCCATATTTAG 59.659 41.667 6.09 0.00 35.00 1.85
3990 8535 4.282496 ACCCACGATTTTGGCCATATTTA 58.718 39.130 6.09 0.00 35.00 1.40
3991 8536 3.103742 ACCCACGATTTTGGCCATATTT 58.896 40.909 6.09 0.00 35.00 1.40
3993 8538 2.452600 ACCCACGATTTTGGCCATAT 57.547 45.000 6.09 2.80 35.00 1.78
3994 8539 3.367646 TTACCCACGATTTTGGCCATA 57.632 42.857 6.09 0.00 35.00 2.74
3996 8541 1.614413 GTTTACCCACGATTTTGGCCA 59.386 47.619 0.00 0.00 35.00 5.36
3999 8544 1.267261 TGCGTTTACCCACGATTTTGG 59.733 47.619 0.00 0.00 43.15 3.28
4002 8547 2.554893 ACAATGCGTTTACCCACGATTT 59.445 40.909 0.00 0.00 43.15 2.17
4003 8548 2.156098 ACAATGCGTTTACCCACGATT 58.844 42.857 0.00 0.00 43.15 3.34
4005 8550 2.452295 TACAATGCGTTTACCCACGA 57.548 45.000 0.00 0.00 43.15 4.35
4006 8551 4.508492 TCATATACAATGCGTTTACCCACG 59.492 41.667 0.00 0.00 43.36 4.94
4007 8552 5.560183 GCTCATATACAATGCGTTTACCCAC 60.560 44.000 0.00 0.00 0.00 4.61
4010 8555 4.513692 TGGCTCATATACAATGCGTTTACC 59.486 41.667 0.00 0.00 0.00 2.85
4011 8556 5.666969 TGGCTCATATACAATGCGTTTAC 57.333 39.130 0.00 0.00 0.00 2.01
4012 8557 6.347321 CGATTGGCTCATATACAATGCGTTTA 60.347 38.462 0.00 0.00 35.17 2.01
4013 8558 5.560760 CGATTGGCTCATATACAATGCGTTT 60.561 40.000 0.00 0.00 35.17 3.60
4014 8559 4.083855 CGATTGGCTCATATACAATGCGTT 60.084 41.667 0.00 0.00 35.17 4.84
4015 8560 3.433274 CGATTGGCTCATATACAATGCGT 59.567 43.478 0.00 0.00 35.17 5.24
4016 8561 3.679502 TCGATTGGCTCATATACAATGCG 59.320 43.478 0.00 0.00 35.17 4.73
4018 8563 5.389830 CCGTTCGATTGGCTCATATACAATG 60.390 44.000 0.00 0.00 35.17 2.82
4019 8564 4.690748 CCGTTCGATTGGCTCATATACAAT 59.309 41.667 0.00 0.00 37.52 2.71
4021 8566 3.319689 TCCGTTCGATTGGCTCATATACA 59.680 43.478 0.00 0.00 0.00 2.29
4023 8568 4.021456 ACATCCGTTCGATTGGCTCATATA 60.021 41.667 0.00 0.00 0.00 0.86
4024 8569 3.244215 ACATCCGTTCGATTGGCTCATAT 60.244 43.478 0.00 0.00 0.00 1.78
4025 8570 2.102420 ACATCCGTTCGATTGGCTCATA 59.898 45.455 0.00 0.00 0.00 2.15
4026 8571 1.134401 ACATCCGTTCGATTGGCTCAT 60.134 47.619 0.00 0.00 0.00 2.90
4037 8755 5.177696 GCCTCTGTTTGATATACATCCGTTC 59.822 44.000 0.00 0.00 0.00 3.95
4055 8773 4.516698 AGGCAAAATAATATGACGCCTCTG 59.483 41.667 0.00 0.00 44.98 3.35
4062 8780 8.139989 AGATTGAGCAAGGCAAAATAATATGAC 58.860 33.333 0.00 0.00 0.00 3.06
4084 8802 4.574674 TGACAGGGCAGACATTTAGATT 57.425 40.909 0.00 0.00 0.00 2.40
4089 8807 3.007182 CCATTTTGACAGGGCAGACATTT 59.993 43.478 0.00 0.00 0.00 2.32
4100 8818 4.067896 ACAGTAGTGCTCCATTTTGACAG 58.932 43.478 0.00 0.00 0.00 3.51
4101 8819 4.085357 ACAGTAGTGCTCCATTTTGACA 57.915 40.909 0.00 0.00 0.00 3.58
4102 8820 5.294552 GGATACAGTAGTGCTCCATTTTGAC 59.705 44.000 12.71 0.00 33.46 3.18
4103 8821 5.045942 TGGATACAGTAGTGCTCCATTTTGA 60.046 40.000 15.27 0.00 46.17 2.69
4104 8822 5.185454 TGGATACAGTAGTGCTCCATTTTG 58.815 41.667 15.27 0.00 46.17 2.44
4138 8856 1.596934 GATGGTTGACCGAGGAGCA 59.403 57.895 0.00 0.00 39.43 4.26
4139 8857 1.153349 GGATGGTTGACCGAGGAGC 60.153 63.158 0.00 0.00 39.43 4.70
4140 8858 1.522569 GGGATGGTTGACCGAGGAG 59.477 63.158 0.00 0.00 39.43 3.69
4141 8859 3.721868 GGGATGGTTGACCGAGGA 58.278 61.111 0.00 0.00 39.43 3.71
4146 8864 0.673644 CAGACACGGGATGGTTGACC 60.674 60.000 0.00 0.00 0.00 4.02
4147 8865 0.320374 TCAGACACGGGATGGTTGAC 59.680 55.000 0.00 0.00 0.00 3.18
4148 8866 1.001974 CTTCAGACACGGGATGGTTGA 59.998 52.381 0.00 0.00 0.00 3.18
4149 8867 1.270839 ACTTCAGACACGGGATGGTTG 60.271 52.381 0.00 0.00 0.00 3.77
4150 8868 1.056660 ACTTCAGACACGGGATGGTT 58.943 50.000 0.00 0.00 0.00 3.67
4151 8869 1.056660 AACTTCAGACACGGGATGGT 58.943 50.000 0.00 0.00 0.00 3.55
4152 8870 2.028476 TGTAACTTCAGACACGGGATGG 60.028 50.000 0.00 0.00 0.00 3.51
4153 8871 2.993899 GTGTAACTTCAGACACGGGATG 59.006 50.000 0.00 0.00 36.88 3.51
4154 8872 2.028385 GGTGTAACTTCAGACACGGGAT 60.028 50.000 0.00 0.00 45.64 3.85
4155 8873 1.342174 GGTGTAACTTCAGACACGGGA 59.658 52.381 0.00 0.00 45.64 5.14
4156 8874 1.069513 TGGTGTAACTTCAGACACGGG 59.930 52.381 0.00 0.00 45.64 5.28
4157 8875 2.404215 CTGGTGTAACTTCAGACACGG 58.596 52.381 0.00 0.00 45.64 4.94
4158 8876 1.792949 GCTGGTGTAACTTCAGACACG 59.207 52.381 0.00 0.00 45.64 4.49
4159 8877 1.792949 CGCTGGTGTAACTTCAGACAC 59.207 52.381 0.00 0.00 44.27 3.67
4160 8878 1.684450 TCGCTGGTGTAACTTCAGACA 59.316 47.619 0.00 0.00 36.74 3.41
4161 8879 2.059541 GTCGCTGGTGTAACTTCAGAC 58.940 52.381 0.00 0.00 36.74 3.51
4162 8880 1.961394 AGTCGCTGGTGTAACTTCAGA 59.039 47.619 0.00 0.00 36.74 3.27
4163 8881 2.440539 AGTCGCTGGTGTAACTTCAG 57.559 50.000 0.00 0.00 36.74 3.02
4164 8882 2.624364 TGTAGTCGCTGGTGTAACTTCA 59.376 45.455 0.00 0.00 36.74 3.02
4165 8883 3.293311 TGTAGTCGCTGGTGTAACTTC 57.707 47.619 0.00 0.00 36.74 3.01
4166 8884 3.585862 CATGTAGTCGCTGGTGTAACTT 58.414 45.455 0.00 0.00 36.74 2.66
4167 8885 2.674177 GCATGTAGTCGCTGGTGTAACT 60.674 50.000 0.00 0.00 36.74 2.24
4168 8886 1.659098 GCATGTAGTCGCTGGTGTAAC 59.341 52.381 0.00 0.00 0.00 2.50
4169 8887 1.404986 GGCATGTAGTCGCTGGTGTAA 60.405 52.381 0.00 0.00 0.00 2.41
4170 8888 0.174845 GGCATGTAGTCGCTGGTGTA 59.825 55.000 0.00 0.00 0.00 2.90
4171 8889 1.079127 GGCATGTAGTCGCTGGTGT 60.079 57.895 0.00 0.00 0.00 4.16
4172 8890 0.459899 TAGGCATGTAGTCGCTGGTG 59.540 55.000 0.00 0.00 0.00 4.17
4173 8891 0.460311 GTAGGCATGTAGTCGCTGGT 59.540 55.000 0.00 0.00 0.00 4.00
4174 8892 0.747255 AGTAGGCATGTAGTCGCTGG 59.253 55.000 0.00 0.00 0.00 4.85
4175 8893 2.619177 ACTAGTAGGCATGTAGTCGCTG 59.381 50.000 1.45 0.00 0.00 5.18
4176 8894 2.933573 ACTAGTAGGCATGTAGTCGCT 58.066 47.619 1.45 0.00 0.00 4.93
4177 8895 3.712091 AACTAGTAGGCATGTAGTCGC 57.288 47.619 0.00 0.00 0.00 5.19
4178 8896 8.644318 AATTTTAACTAGTAGGCATGTAGTCG 57.356 34.615 0.00 0.00 0.00 4.18
4180 8898 9.953565 TGAAATTTTAACTAGTAGGCATGTAGT 57.046 29.630 0.00 0.00 0.00 2.73
4182 8900 9.169592 GGTGAAATTTTAACTAGTAGGCATGTA 57.830 33.333 0.00 0.00 0.00 2.29
4183 8901 7.668052 TGGTGAAATTTTAACTAGTAGGCATGT 59.332 33.333 0.00 0.00 0.00 3.21
4184 8902 8.050778 TGGTGAAATTTTAACTAGTAGGCATG 57.949 34.615 0.00 0.00 0.00 4.06
4185 8903 8.823220 ATGGTGAAATTTTAACTAGTAGGCAT 57.177 30.769 0.00 0.00 0.00 4.40
4186 8904 9.742144 TTATGGTGAAATTTTAACTAGTAGGCA 57.258 29.630 0.00 0.00 0.00 4.75
4194 8912 9.008965 GCCCAAATTTATGGTGAAATTTTAACT 57.991 29.630 0.00 0.00 43.29 2.24
4195 8913 8.787852 TGCCCAAATTTATGGTGAAATTTTAAC 58.212 29.630 4.53 0.00 43.29 2.01
4196 8914 8.924511 TGCCCAAATTTATGGTGAAATTTTAA 57.075 26.923 4.53 0.00 43.29 1.52
4197 8915 8.924511 TTGCCCAAATTTATGGTGAAATTTTA 57.075 26.923 4.53 0.00 43.29 1.52
4198 8916 7.830099 TTGCCCAAATTTATGGTGAAATTTT 57.170 28.000 4.53 0.00 43.29 1.82
4199 8917 8.955388 GTATTGCCCAAATTTATGGTGAAATTT 58.045 29.630 7.53 0.00 45.50 1.82
4200 8918 7.279758 CGTATTGCCCAAATTTATGGTGAAATT 59.720 33.333 7.53 0.00 40.03 1.82
4201 8919 6.760770 CGTATTGCCCAAATTTATGGTGAAAT 59.239 34.615 7.53 7.71 38.91 2.17
4202 8920 6.102663 CGTATTGCCCAAATTTATGGTGAAA 58.897 36.000 7.53 2.32 38.91 2.69
4203 8921 5.186021 ACGTATTGCCCAAATTTATGGTGAA 59.814 36.000 7.53 2.86 38.91 3.18
4204 8922 4.707448 ACGTATTGCCCAAATTTATGGTGA 59.293 37.500 7.53 0.00 38.91 4.02
4205 8923 5.004922 ACGTATTGCCCAAATTTATGGTG 57.995 39.130 7.53 0.00 38.91 4.17
4206 8924 5.889289 AGTACGTATTGCCCAAATTTATGGT 59.111 36.000 0.00 0.00 38.91 3.55
4207 8925 6.385649 AGTACGTATTGCCCAAATTTATGG 57.614 37.500 0.00 0.00 40.35 2.74
4208 8926 8.149973 ACTAGTACGTATTGCCCAAATTTATG 57.850 34.615 0.00 0.00 0.00 1.90
4209 8927 8.208903 AGACTAGTACGTATTGCCCAAATTTAT 58.791 33.333 0.00 0.00 0.00 1.40
4210 8928 7.558604 AGACTAGTACGTATTGCCCAAATTTA 58.441 34.615 0.00 0.00 0.00 1.40
4211 8929 6.412214 AGACTAGTACGTATTGCCCAAATTT 58.588 36.000 0.00 0.00 0.00 1.82
4212 8930 5.985911 AGACTAGTACGTATTGCCCAAATT 58.014 37.500 0.00 0.00 0.00 1.82
4213 8931 5.609533 AGACTAGTACGTATTGCCCAAAT 57.390 39.130 0.00 0.00 0.00 2.32
4214 8932 6.720112 ATAGACTAGTACGTATTGCCCAAA 57.280 37.500 0.00 0.00 0.00 3.28
4215 8933 6.461927 CCAATAGACTAGTACGTATTGCCCAA 60.462 42.308 18.42 0.00 33.38 4.12
4216 8934 5.010314 CCAATAGACTAGTACGTATTGCCCA 59.990 44.000 18.42 0.00 33.38 5.36
4217 8935 5.010415 ACCAATAGACTAGTACGTATTGCCC 59.990 44.000 18.42 0.00 33.38 5.36
4218 8936 6.081872 ACCAATAGACTAGTACGTATTGCC 57.918 41.667 18.42 0.00 33.38 4.52
4219 8937 6.148264 GGACCAATAGACTAGTACGTATTGC 58.852 44.000 18.42 10.82 33.38 3.56
4220 8938 6.489361 AGGGACCAATAGACTAGTACGTATTG 59.511 42.308 17.57 17.57 34.15 1.90
4221 8939 6.608922 AGGGACCAATAGACTAGTACGTATT 58.391 40.000 0.00 0.00 0.00 1.89
4222 8940 6.198237 AGGGACCAATAGACTAGTACGTAT 57.802 41.667 0.00 0.00 0.00 3.06
4223 8941 5.636903 AGGGACCAATAGACTAGTACGTA 57.363 43.478 0.00 0.00 0.00 3.57
4224 8942 4.516652 AGGGACCAATAGACTAGTACGT 57.483 45.455 0.00 0.00 0.00 3.57
4225 8943 5.126707 ACAAAGGGACCAATAGACTAGTACG 59.873 44.000 0.00 0.00 0.00 3.67
4226 8944 6.541934 ACAAAGGGACCAATAGACTAGTAC 57.458 41.667 0.00 0.00 0.00 2.73
4227 8945 8.287350 AGATACAAAGGGACCAATAGACTAGTA 58.713 37.037 0.00 0.00 0.00 1.82
4228 8946 7.133483 AGATACAAAGGGACCAATAGACTAGT 58.867 38.462 0.00 0.00 0.00 2.57
4229 8947 7.604657 AGATACAAAGGGACCAATAGACTAG 57.395 40.000 0.00 0.00 0.00 2.57
4230 8948 7.402071 ACAAGATACAAAGGGACCAATAGACTA 59.598 37.037 0.00 0.00 0.00 2.59
4231 8949 6.215636 ACAAGATACAAAGGGACCAATAGACT 59.784 38.462 0.00 0.00 0.00 3.24
4232 8950 6.415573 ACAAGATACAAAGGGACCAATAGAC 58.584 40.000 0.00 0.00 0.00 2.59
4233 8951 6.443849 AGACAAGATACAAAGGGACCAATAGA 59.556 38.462 0.00 0.00 0.00 1.98
4234 8952 6.653989 AGACAAGATACAAAGGGACCAATAG 58.346 40.000 0.00 0.00 0.00 1.73
4235 8953 6.214615 TGAGACAAGATACAAAGGGACCAATA 59.785 38.462 0.00 0.00 0.00 1.90
4236 8954 5.014123 TGAGACAAGATACAAAGGGACCAAT 59.986 40.000 0.00 0.00 0.00 3.16
4237 8955 4.349636 TGAGACAAGATACAAAGGGACCAA 59.650 41.667 0.00 0.00 0.00 3.67
4238 8956 3.907474 TGAGACAAGATACAAAGGGACCA 59.093 43.478 0.00 0.00 0.00 4.02
4239 8957 4.553330 TGAGACAAGATACAAAGGGACC 57.447 45.455 0.00 0.00 0.00 4.46
4240 8958 7.454260 AATTTGAGACAAGATACAAAGGGAC 57.546 36.000 0.00 0.00 36.07 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.