Multiple sequence alignment - TraesCS4A01G302500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4A01G302500 | chr4A | 100.000 | 4434 | 0 | 0 | 1 | 4434 | 598811145 | 598806712 | 0.000000e+00 | 8189.0 |
1 | TraesCS4A01G302500 | chr4A | 83.128 | 812 | 76 | 24 | 740 | 1520 | 599126057 | 599125276 | 0.000000e+00 | 684.0 |
2 | TraesCS4A01G302500 | chr4A | 82.759 | 812 | 80 | 19 | 740 | 1520 | 599248097 | 599247315 | 0.000000e+00 | 669.0 |
3 | TraesCS4A01G302500 | chr4A | 82.780 | 813 | 77 | 22 | 740 | 1520 | 599159018 | 599158237 | 0.000000e+00 | 667.0 |
4 | TraesCS4A01G302500 | chr4A | 97.619 | 378 | 3 | 1 | 1 | 378 | 658181007 | 658181378 | 1.040000e-180 | 643.0 |
5 | TraesCS4A01G302500 | chr4A | 96.842 | 380 | 11 | 1 | 1 | 379 | 728814462 | 728814083 | 6.260000e-178 | 634.0 |
6 | TraesCS4A01G302500 | chr4A | 81.886 | 806 | 90 | 23 | 740 | 1520 | 599084843 | 599084069 | 2.910000e-176 | 628.0 |
7 | TraesCS4A01G302500 | chr4A | 81.615 | 805 | 90 | 20 | 740 | 1518 | 599102566 | 599101794 | 8.150000e-172 | 614.0 |
8 | TraesCS4A01G302500 | chr4A | 81.491 | 805 | 90 | 22 | 740 | 1518 | 599146785 | 599146014 | 1.360000e-169 | 606.0 |
9 | TraesCS4A01G302500 | chr4A | 78.280 | 686 | 93 | 32 | 828 | 1497 | 598910483 | 598909838 | 1.500000e-104 | 390.0 |
10 | TraesCS4A01G302500 | chr4A | 77.574 | 709 | 103 | 35 | 828 | 1518 | 598960854 | 598960184 | 1.160000e-100 | 377.0 |
11 | TraesCS4A01G302500 | chr4A | 81.100 | 291 | 48 | 6 | 1624 | 1910 | 598786963 | 598786676 | 4.460000e-55 | 226.0 |
12 | TraesCS4A01G302500 | chr4A | 87.940 | 199 | 9 | 7 | 740 | 928 | 599202336 | 599202143 | 2.080000e-53 | 220.0 |
13 | TraesCS4A01G302500 | chr4D | 95.220 | 2845 | 111 | 15 | 1594 | 4433 | 4465102 | 4467926 | 0.000000e+00 | 4477.0 |
14 | TraesCS4A01G302500 | chr4D | 78.327 | 2044 | 345 | 61 | 1908 | 3914 | 4418189 | 4420171 | 0.000000e+00 | 1230.0 |
15 | TraesCS4A01G302500 | chr4D | 85.130 | 733 | 50 | 26 | 834 | 1545 | 4464302 | 4464996 | 0.000000e+00 | 695.0 |
16 | TraesCS4A01G302500 | chr4D | 82.936 | 797 | 99 | 12 | 740 | 1520 | 4416883 | 4417658 | 0.000000e+00 | 684.0 |
17 | TraesCS4A01G302500 | chr4D | 81.337 | 793 | 108 | 22 | 740 | 1520 | 4458750 | 4459514 | 3.790000e-170 | 608.0 |
18 | TraesCS4A01G302500 | chr4D | 83.947 | 380 | 25 | 15 | 378 | 734 | 4463882 | 4464248 | 9.190000e-87 | 331.0 |
19 | TraesCS4A01G302500 | chr4B | 92.351 | 2850 | 148 | 23 | 1594 | 4433 | 7382279 | 7385068 | 0.000000e+00 | 3991.0 |
20 | TraesCS4A01G302500 | chr4B | 78.299 | 2046 | 343 | 61 | 1912 | 3914 | 7354659 | 7356646 | 0.000000e+00 | 1225.0 |
21 | TraesCS4A01G302500 | chr4B | 78.203 | 2014 | 338 | 54 | 1908 | 3880 | 7171683 | 7173636 | 0.000000e+00 | 1194.0 |
22 | TraesCS4A01G302500 | chr4B | 78.075 | 2016 | 337 | 59 | 1908 | 3880 | 7309749 | 7311702 | 0.000000e+00 | 1177.0 |
23 | TraesCS4A01G302500 | chr4B | 77.998 | 2018 | 337 | 61 | 1908 | 3880 | 7218642 | 7220597 | 0.000000e+00 | 1168.0 |
24 | TraesCS4A01G302500 | chr4B | 77.866 | 2015 | 343 | 56 | 1908 | 3880 | 7264259 | 7266212 | 0.000000e+00 | 1155.0 |
25 | TraesCS4A01G302500 | chr4B | 88.844 | 744 | 36 | 23 | 835 | 1545 | 7381436 | 7382165 | 0.000000e+00 | 870.0 |
26 | TraesCS4A01G302500 | chr4B | 83.127 | 806 | 89 | 19 | 740 | 1520 | 7170361 | 7171144 | 0.000000e+00 | 691.0 |
27 | TraesCS4A01G302500 | chr4B | 83.147 | 807 | 87 | 23 | 740 | 1520 | 7217320 | 7218103 | 0.000000e+00 | 691.0 |
28 | TraesCS4A01G302500 | chr4B | 83.127 | 806 | 89 | 19 | 740 | 1520 | 7308427 | 7309210 | 0.000000e+00 | 691.0 |
29 | TraesCS4A01G302500 | chr4B | 82.652 | 807 | 91 | 25 | 740 | 1520 | 7262936 | 7263719 | 0.000000e+00 | 669.0 |
30 | TraesCS4A01G302500 | chr4B | 81.774 | 823 | 99 | 20 | 722 | 1520 | 7353332 | 7354127 | 3.740000e-180 | 641.0 |
31 | TraesCS4A01G302500 | chr4B | 87.588 | 427 | 37 | 6 | 378 | 789 | 7381019 | 7381444 | 8.630000e-132 | 481.0 |
32 | TraesCS4A01G302500 | chr4B | 85.398 | 226 | 31 | 2 | 1683 | 1908 | 7469754 | 7469977 | 2.670000e-57 | 233.0 |
33 | TraesCS4A01G302500 | chr4B | 80.528 | 303 | 29 | 16 | 676 | 974 | 7420342 | 7420618 | 5.810000e-49 | 206.0 |
34 | TraesCS4A01G302500 | chr4B | 97.143 | 35 | 1 | 0 | 1560 | 1594 | 7382223 | 7382257 | 4.790000e-05 | 60.2 |
35 | TraesCS4A01G302500 | chr1B | 88.612 | 1405 | 143 | 13 | 2512 | 3907 | 46554010 | 46552614 | 0.000000e+00 | 1692.0 |
36 | TraesCS4A01G302500 | chr7B | 96.834 | 379 | 12 | 0 | 1 | 379 | 729408567 | 729408945 | 6.260000e-178 | 634.0 |
37 | TraesCS4A01G302500 | chr7B | 96.570 | 379 | 13 | 0 | 1 | 379 | 707648268 | 707647890 | 2.910000e-176 | 628.0 |
38 | TraesCS4A01G302500 | chr6B | 96.817 | 377 | 12 | 0 | 1 | 377 | 34860273 | 34859897 | 8.090000e-177 | 630.0 |
39 | TraesCS4A01G302500 | chr6A | 96.817 | 377 | 12 | 0 | 1 | 377 | 9572342 | 9571966 | 8.090000e-177 | 630.0 |
40 | TraesCS4A01G302500 | chr6A | 83.420 | 386 | 35 | 16 | 740 | 1107 | 593027233 | 593026859 | 9.190000e-87 | 331.0 |
41 | TraesCS4A01G302500 | chr3B | 96.825 | 378 | 11 | 1 | 1 | 377 | 739840267 | 739840644 | 8.090000e-177 | 630.0 |
42 | TraesCS4A01G302500 | chr2A | 96.817 | 377 | 12 | 0 | 1 | 377 | 22041202 | 22040826 | 8.090000e-177 | 630.0 |
43 | TraesCS4A01G302500 | chr5B | 96.561 | 378 | 13 | 0 | 1 | 378 | 549396745 | 549396368 | 1.050000e-175 | 627.0 |
44 | TraesCS4A01G302500 | chrUn | 81.615 | 805 | 89 | 22 | 740 | 1518 | 360633182 | 360632411 | 2.930000e-171 | 612.0 |
45 | TraesCS4A01G302500 | chrUn | 85.536 | 401 | 46 | 7 | 1123 | 1520 | 216675825 | 216675434 | 4.130000e-110 | 409.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4A01G302500 | chr4A | 598806712 | 598811145 | 4433 | True | 8189.000000 | 8189 | 100.0000 | 1 | 4434 | 1 | chr4A.!!$R2 | 4433 |
1 | TraesCS4A01G302500 | chr4A | 599125276 | 599126057 | 781 | True | 684.000000 | 684 | 83.1280 | 740 | 1520 | 1 | chr4A.!!$R7 | 780 |
2 | TraesCS4A01G302500 | chr4A | 599247315 | 599248097 | 782 | True | 669.000000 | 669 | 82.7590 | 740 | 1520 | 1 | chr4A.!!$R11 | 780 |
3 | TraesCS4A01G302500 | chr4A | 599158237 | 599159018 | 781 | True | 667.000000 | 667 | 82.7800 | 740 | 1520 | 1 | chr4A.!!$R9 | 780 |
4 | TraesCS4A01G302500 | chr4A | 599084069 | 599084843 | 774 | True | 628.000000 | 628 | 81.8860 | 740 | 1520 | 1 | chr4A.!!$R5 | 780 |
5 | TraesCS4A01G302500 | chr4A | 599101794 | 599102566 | 772 | True | 614.000000 | 614 | 81.6150 | 740 | 1518 | 1 | chr4A.!!$R6 | 778 |
6 | TraesCS4A01G302500 | chr4A | 599146014 | 599146785 | 771 | True | 606.000000 | 606 | 81.4910 | 740 | 1518 | 1 | chr4A.!!$R8 | 778 |
7 | TraesCS4A01G302500 | chr4A | 598909838 | 598910483 | 645 | True | 390.000000 | 390 | 78.2800 | 828 | 1497 | 1 | chr4A.!!$R3 | 669 |
8 | TraesCS4A01G302500 | chr4A | 598960184 | 598960854 | 670 | True | 377.000000 | 377 | 77.5740 | 828 | 1518 | 1 | chr4A.!!$R4 | 690 |
9 | TraesCS4A01G302500 | chr4D | 4463882 | 4467926 | 4044 | False | 1834.333333 | 4477 | 88.0990 | 378 | 4433 | 3 | chr4D.!!$F3 | 4055 |
10 | TraesCS4A01G302500 | chr4D | 4416883 | 4420171 | 3288 | False | 957.000000 | 1230 | 80.6315 | 740 | 3914 | 2 | chr4D.!!$F2 | 3174 |
11 | TraesCS4A01G302500 | chr4D | 4458750 | 4459514 | 764 | False | 608.000000 | 608 | 81.3370 | 740 | 1520 | 1 | chr4D.!!$F1 | 780 |
12 | TraesCS4A01G302500 | chr4B | 7381019 | 7385068 | 4049 | False | 1350.550000 | 3991 | 91.4815 | 378 | 4433 | 4 | chr4B.!!$F8 | 4055 |
13 | TraesCS4A01G302500 | chr4B | 7170361 | 7173636 | 3275 | False | 942.500000 | 1194 | 80.6650 | 740 | 3880 | 2 | chr4B.!!$F3 | 3140 |
14 | TraesCS4A01G302500 | chr4B | 7308427 | 7311702 | 3275 | False | 934.000000 | 1177 | 80.6010 | 740 | 3880 | 2 | chr4B.!!$F6 | 3140 |
15 | TraesCS4A01G302500 | chr4B | 7353332 | 7356646 | 3314 | False | 933.000000 | 1225 | 80.0365 | 722 | 3914 | 2 | chr4B.!!$F7 | 3192 |
16 | TraesCS4A01G302500 | chr4B | 7217320 | 7220597 | 3277 | False | 929.500000 | 1168 | 80.5725 | 740 | 3880 | 2 | chr4B.!!$F4 | 3140 |
17 | TraesCS4A01G302500 | chr4B | 7262936 | 7266212 | 3276 | False | 912.000000 | 1155 | 80.2590 | 740 | 3880 | 2 | chr4B.!!$F5 | 3140 |
18 | TraesCS4A01G302500 | chr1B | 46552614 | 46554010 | 1396 | True | 1692.000000 | 1692 | 88.6120 | 2512 | 3907 | 1 | chr1B.!!$R1 | 1395 |
19 | TraesCS4A01G302500 | chrUn | 360632411 | 360633182 | 771 | True | 612.000000 | 612 | 81.6150 | 740 | 1518 | 1 | chrUn.!!$R2 | 778 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
345 | 346 | 0.034863 | ACGCGGTAACCATGGGAAAT | 60.035 | 50.000 | 18.09 | 1.59 | 0.0 | 2.17 | F |
1087 | 1161 | 0.041982 | ACTCCCCTCCTCTTCAGTCC | 59.958 | 60.000 | 0.00 | 0.00 | 0.0 | 3.85 | F |
1491 | 1590 | 2.175202 | TCTCTCTCTTCCACCAGCTTC | 58.825 | 52.381 | 0.00 | 0.00 | 0.0 | 3.86 | F |
2077 | 2390 | 0.249699 | CAGCAGGGTGTGTACGTCAA | 60.250 | 55.000 | 0.00 | 0.00 | 0.0 | 3.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1783 | 2041 | 0.108585 | ATATGACGGCCGCCAGAAAT | 59.891 | 50.000 | 28.58 | 13.0 | 0.00 | 2.17 | R |
2057 | 2363 | 1.366366 | GACGTACACACCCTGCTGT | 59.634 | 57.895 | 0.00 | 0.0 | 0.00 | 4.40 | R |
2875 | 3222 | 3.511146 | ACACAAGGCACCTGAAATAATGG | 59.489 | 43.478 | 0.00 | 0.0 | 0.00 | 3.16 | R |
3963 | 4331 | 0.757188 | TTTGTGCCAACCCACGGATT | 60.757 | 50.000 | 0.00 | 0.0 | 38.55 | 3.01 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 3.418047 | AGGTTTTGGTTACCGAATGAGG | 58.582 | 45.455 | 4.72 | 0.00 | 40.69 | 3.86 |
22 | 23 | 2.094906 | GGTTTTGGTTACCGAATGAGGC | 60.095 | 50.000 | 4.72 | 0.00 | 33.69 | 4.70 |
23 | 24 | 2.554893 | GTTTTGGTTACCGAATGAGGCA | 59.445 | 45.455 | 4.72 | 0.00 | 33.69 | 4.75 |
24 | 25 | 2.570415 | TTGGTTACCGAATGAGGCAA | 57.430 | 45.000 | 0.00 | 0.00 | 33.69 | 4.52 |
25 | 26 | 2.799126 | TGGTTACCGAATGAGGCAAT | 57.201 | 45.000 | 0.00 | 0.00 | 33.69 | 3.56 |
26 | 27 | 3.080300 | TGGTTACCGAATGAGGCAATT | 57.920 | 42.857 | 0.00 | 0.00 | 33.69 | 2.32 |
27 | 28 | 3.426615 | TGGTTACCGAATGAGGCAATTT | 58.573 | 40.909 | 0.00 | 0.00 | 33.69 | 1.82 |
28 | 29 | 3.829601 | TGGTTACCGAATGAGGCAATTTT | 59.170 | 39.130 | 0.00 | 0.00 | 33.69 | 1.82 |
29 | 30 | 5.010933 | TGGTTACCGAATGAGGCAATTTTA | 58.989 | 37.500 | 0.00 | 0.00 | 33.69 | 1.52 |
30 | 31 | 5.106078 | TGGTTACCGAATGAGGCAATTTTAC | 60.106 | 40.000 | 0.00 | 0.00 | 33.69 | 2.01 |
31 | 32 | 5.337554 | GTTACCGAATGAGGCAATTTTACC | 58.662 | 41.667 | 0.00 | 0.00 | 33.69 | 2.85 |
32 | 33 | 2.422127 | ACCGAATGAGGCAATTTTACCG | 59.578 | 45.455 | 0.00 | 0.00 | 33.69 | 4.02 |
33 | 34 | 2.680841 | CCGAATGAGGCAATTTTACCGA | 59.319 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
34 | 35 | 3.242739 | CCGAATGAGGCAATTTTACCGAG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
35 | 36 | 3.242739 | CGAATGAGGCAATTTTACCGAGG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
36 | 37 | 3.644966 | ATGAGGCAATTTTACCGAGGA | 57.355 | 42.857 | 0.00 | 0.00 | 0.00 | 3.71 |
37 | 38 | 2.985896 | TGAGGCAATTTTACCGAGGAG | 58.014 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
39 | 40 | 1.913419 | AGGCAATTTTACCGAGGAGGA | 59.087 | 47.619 | 0.00 | 0.00 | 45.00 | 3.71 |
40 | 41 | 2.014857 | GGCAATTTTACCGAGGAGGAC | 58.985 | 52.381 | 0.00 | 0.00 | 45.00 | 3.85 |
41 | 42 | 1.664151 | GCAATTTTACCGAGGAGGACG | 59.336 | 52.381 | 0.00 | 0.00 | 45.00 | 4.79 |
47 | 48 | 4.023137 | CCGAGGAGGACGGGTAAA | 57.977 | 61.111 | 0.00 | 0.00 | 45.65 | 2.01 |
48 | 49 | 2.512973 | CCGAGGAGGACGGGTAAAT | 58.487 | 57.895 | 0.00 | 0.00 | 45.65 | 1.40 |
49 | 50 | 0.104304 | CCGAGGAGGACGGGTAAATG | 59.896 | 60.000 | 0.00 | 0.00 | 45.65 | 2.32 |
50 | 51 | 0.822164 | CGAGGAGGACGGGTAAATGT | 59.178 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
51 | 52 | 1.470979 | CGAGGAGGACGGGTAAATGTG | 60.471 | 57.143 | 0.00 | 0.00 | 0.00 | 3.21 |
52 | 53 | 0.909623 | AGGAGGACGGGTAAATGTGG | 59.090 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
53 | 54 | 0.616891 | GGAGGACGGGTAAATGTGGT | 59.383 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
54 | 55 | 1.003928 | GGAGGACGGGTAAATGTGGTT | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
55 | 56 | 2.236893 | GGAGGACGGGTAAATGTGGTTA | 59.763 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
56 | 57 | 3.264947 | GAGGACGGGTAAATGTGGTTAC | 58.735 | 50.000 | 0.00 | 0.00 | 33.91 | 2.50 |
80 | 81 | 3.508744 | GGTTACCGACAAATACCGAGA | 57.491 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
81 | 82 | 3.848726 | GGTTACCGACAAATACCGAGAA | 58.151 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
82 | 83 | 4.244862 | GGTTACCGACAAATACCGAGAAA | 58.755 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
83 | 84 | 4.872124 | GGTTACCGACAAATACCGAGAAAT | 59.128 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
84 | 85 | 6.042143 | GGTTACCGACAAATACCGAGAAATA | 58.958 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
85 | 86 | 6.019559 | GGTTACCGACAAATACCGAGAAATAC | 60.020 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
86 | 87 | 4.436332 | ACCGACAAATACCGAGAAATACC | 58.564 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
87 | 88 | 3.488310 | CCGACAAATACCGAGAAATACCG | 59.512 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
88 | 89 | 4.353737 | CGACAAATACCGAGAAATACCGA | 58.646 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
89 | 90 | 4.440103 | CGACAAATACCGAGAAATACCGAG | 59.560 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
90 | 91 | 5.585390 | GACAAATACCGAGAAATACCGAGA | 58.415 | 41.667 | 0.00 | 0.00 | 0.00 | 4.04 |
91 | 92 | 5.969423 | ACAAATACCGAGAAATACCGAGAA | 58.031 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
92 | 93 | 6.579865 | ACAAATACCGAGAAATACCGAGAAT | 58.420 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
93 | 94 | 7.719483 | ACAAATACCGAGAAATACCGAGAATA | 58.281 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
94 | 95 | 8.365647 | ACAAATACCGAGAAATACCGAGAATAT | 58.634 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
95 | 96 | 9.204570 | CAAATACCGAGAAATACCGAGAATATT | 57.795 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
96 | 97 | 9.774413 | AAATACCGAGAAATACCGAGAATATTT | 57.226 | 29.630 | 0.00 | 0.00 | 35.43 | 1.40 |
97 | 98 | 8.983307 | ATACCGAGAAATACCGAGAATATTTC | 57.017 | 34.615 | 8.71 | 8.71 | 44.27 | 2.17 |
98 | 99 | 5.919141 | ACCGAGAAATACCGAGAATATTTCG | 59.081 | 40.000 | 10.33 | 10.96 | 46.64 | 3.46 |
99 | 100 | 6.147581 | CCGAGAAATACCGAGAATATTTCGA | 58.852 | 40.000 | 16.51 | 0.00 | 46.64 | 3.71 |
100 | 101 | 6.305877 | CCGAGAAATACCGAGAATATTTCGAG | 59.694 | 42.308 | 16.51 | 11.24 | 46.64 | 4.04 |
101 | 102 | 6.183359 | CGAGAAATACCGAGAATATTTCGAGC | 60.183 | 42.308 | 16.51 | 5.50 | 46.64 | 5.03 |
102 | 103 | 5.629849 | AGAAATACCGAGAATATTTCGAGCG | 59.370 | 40.000 | 16.51 | 5.82 | 46.64 | 5.03 |
103 | 104 | 4.761235 | ATACCGAGAATATTTCGAGCGA | 57.239 | 40.909 | 16.51 | 0.00 | 40.36 | 4.93 |
104 | 105 | 3.431922 | ACCGAGAATATTTCGAGCGAA | 57.568 | 42.857 | 16.51 | 0.55 | 40.36 | 4.70 |
105 | 106 | 3.978687 | ACCGAGAATATTTCGAGCGAAT | 58.021 | 40.909 | 16.51 | 0.37 | 40.36 | 3.34 |
106 | 107 | 4.369182 | ACCGAGAATATTTCGAGCGAATT | 58.631 | 39.130 | 16.51 | 5.78 | 40.36 | 2.17 |
107 | 108 | 4.809426 | ACCGAGAATATTTCGAGCGAATTT | 59.191 | 37.500 | 16.51 | 1.59 | 40.36 | 1.82 |
108 | 109 | 5.293569 | ACCGAGAATATTTCGAGCGAATTTT | 59.706 | 36.000 | 16.51 | 1.26 | 40.36 | 1.82 |
109 | 110 | 6.477688 | ACCGAGAATATTTCGAGCGAATTTTA | 59.522 | 34.615 | 16.51 | 0.49 | 40.36 | 1.52 |
110 | 111 | 7.170998 | ACCGAGAATATTTCGAGCGAATTTTAT | 59.829 | 33.333 | 16.51 | 0.00 | 40.36 | 1.40 |
111 | 112 | 8.644619 | CCGAGAATATTTCGAGCGAATTTTATA | 58.355 | 33.333 | 16.51 | 2.20 | 40.36 | 0.98 |
112 | 113 | 9.663491 | CGAGAATATTTCGAGCGAATTTTATAG | 57.337 | 33.333 | 6.12 | 0.00 | 40.36 | 1.31 |
120 | 121 | 9.834628 | TTTCGAGCGAATTTTATAGTTGAATTT | 57.165 | 25.926 | 6.12 | 0.00 | 33.79 | 1.82 |
121 | 122 | 9.834628 | TTCGAGCGAATTTTATAGTTGAATTTT | 57.165 | 25.926 | 0.55 | 0.00 | 0.00 | 1.82 |
122 | 123 | 9.272901 | TCGAGCGAATTTTATAGTTGAATTTTG | 57.727 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
123 | 124 | 9.272901 | CGAGCGAATTTTATAGTTGAATTTTGA | 57.727 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
145 | 146 | 9.958234 | TTTGAATTCAAATAAGTGAATGAACGA | 57.042 | 25.926 | 26.01 | 1.80 | 45.42 | 3.85 |
146 | 147 | 9.958234 | TTGAATTCAAATAAGTGAATGAACGAA | 57.042 | 25.926 | 18.45 | 0.00 | 45.42 | 3.85 |
157 | 158 | 7.447374 | AGTGAATGAACGAATATTCAAACCA | 57.553 | 32.000 | 15.57 | 7.57 | 42.86 | 3.67 |
158 | 159 | 7.530010 | AGTGAATGAACGAATATTCAAACCAG | 58.470 | 34.615 | 15.57 | 0.72 | 42.86 | 4.00 |
159 | 160 | 6.747280 | GTGAATGAACGAATATTCAAACCAGG | 59.253 | 38.462 | 15.57 | 0.03 | 42.86 | 4.45 |
160 | 161 | 5.835113 | ATGAACGAATATTCAAACCAGGG | 57.165 | 39.130 | 15.57 | 0.00 | 41.78 | 4.45 |
161 | 162 | 4.912586 | TGAACGAATATTCAAACCAGGGA | 58.087 | 39.130 | 15.57 | 0.00 | 35.65 | 4.20 |
162 | 163 | 4.698304 | TGAACGAATATTCAAACCAGGGAC | 59.302 | 41.667 | 15.57 | 0.00 | 35.65 | 4.46 |
163 | 164 | 3.617284 | ACGAATATTCAAACCAGGGACC | 58.383 | 45.455 | 15.57 | 0.00 | 0.00 | 4.46 |
164 | 165 | 3.265995 | ACGAATATTCAAACCAGGGACCT | 59.734 | 43.478 | 15.57 | 0.00 | 0.00 | 3.85 |
165 | 166 | 3.877508 | CGAATATTCAAACCAGGGACCTC | 59.122 | 47.826 | 15.57 | 0.00 | 0.00 | 3.85 |
166 | 167 | 4.384208 | CGAATATTCAAACCAGGGACCTCT | 60.384 | 45.833 | 15.57 | 0.00 | 0.00 | 3.69 |
167 | 168 | 4.779993 | ATATTCAAACCAGGGACCTCTC | 57.220 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
168 | 169 | 1.814429 | TTCAAACCAGGGACCTCTCA | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
169 | 170 | 1.814429 | TCAAACCAGGGACCTCTCAA | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
170 | 171 | 2.131854 | TCAAACCAGGGACCTCTCAAA | 58.868 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
171 | 172 | 2.512056 | TCAAACCAGGGACCTCTCAAAA | 59.488 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
172 | 173 | 2.623416 | CAAACCAGGGACCTCTCAAAAC | 59.377 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
173 | 174 | 1.518367 | ACCAGGGACCTCTCAAAACA | 58.482 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
174 | 175 | 1.421646 | ACCAGGGACCTCTCAAAACAG | 59.578 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
175 | 176 | 1.271597 | CCAGGGACCTCTCAAAACAGG | 60.272 | 57.143 | 0.00 | 0.00 | 35.69 | 4.00 |
176 | 177 | 1.699634 | CAGGGACCTCTCAAAACAGGA | 59.300 | 52.381 | 0.00 | 0.00 | 33.52 | 3.86 |
177 | 178 | 2.106511 | CAGGGACCTCTCAAAACAGGAA | 59.893 | 50.000 | 0.00 | 0.00 | 33.52 | 3.36 |
178 | 179 | 2.106684 | AGGGACCTCTCAAAACAGGAAC | 59.893 | 50.000 | 0.00 | 0.00 | 33.52 | 3.62 |
179 | 180 | 2.106684 | GGGACCTCTCAAAACAGGAACT | 59.893 | 50.000 | 0.00 | 0.00 | 43.88 | 3.01 |
180 | 181 | 3.326880 | GGGACCTCTCAAAACAGGAACTA | 59.673 | 47.826 | 0.00 | 0.00 | 36.02 | 2.24 |
181 | 182 | 4.563786 | GGGACCTCTCAAAACAGGAACTAG | 60.564 | 50.000 | 0.00 | 0.00 | 36.02 | 2.57 |
182 | 183 | 4.563786 | GGACCTCTCAAAACAGGAACTAGG | 60.564 | 50.000 | 0.00 | 0.00 | 36.02 | 3.02 |
183 | 184 | 3.974642 | ACCTCTCAAAACAGGAACTAGGT | 59.025 | 43.478 | 0.00 | 0.00 | 36.02 | 3.08 |
184 | 185 | 4.412528 | ACCTCTCAAAACAGGAACTAGGTT | 59.587 | 41.667 | 0.00 | 0.00 | 36.02 | 3.50 |
185 | 186 | 4.757149 | CCTCTCAAAACAGGAACTAGGTTG | 59.243 | 45.833 | 0.00 | 0.00 | 36.02 | 3.77 |
186 | 187 | 4.134563 | TCTCAAAACAGGAACTAGGTTGC | 58.865 | 43.478 | 0.00 | 0.00 | 36.02 | 4.17 |
187 | 188 | 4.137543 | CTCAAAACAGGAACTAGGTTGCT | 58.862 | 43.478 | 0.00 | 0.00 | 44.62 | 3.91 |
188 | 189 | 5.071250 | TCTCAAAACAGGAACTAGGTTGCTA | 59.929 | 40.000 | 4.28 | 0.00 | 42.02 | 3.49 |
189 | 190 | 5.061179 | TCAAAACAGGAACTAGGTTGCTAC | 58.939 | 41.667 | 4.28 | 0.00 | 42.02 | 3.58 |
190 | 191 | 3.314541 | AACAGGAACTAGGTTGCTACG | 57.685 | 47.619 | 4.28 | 0.00 | 42.02 | 3.51 |
191 | 192 | 1.549170 | ACAGGAACTAGGTTGCTACGG | 59.451 | 52.381 | 4.28 | 0.00 | 42.02 | 4.02 |
192 | 193 | 1.822990 | CAGGAACTAGGTTGCTACGGA | 59.177 | 52.381 | 4.28 | 0.00 | 42.02 | 4.69 |
193 | 194 | 1.823610 | AGGAACTAGGTTGCTACGGAC | 59.176 | 52.381 | 2.76 | 0.00 | 42.11 | 4.79 |
194 | 195 | 1.547372 | GGAACTAGGTTGCTACGGACA | 59.453 | 52.381 | 0.00 | 0.00 | 31.28 | 4.02 |
195 | 196 | 2.167900 | GGAACTAGGTTGCTACGGACAT | 59.832 | 50.000 | 0.00 | 0.00 | 31.28 | 3.06 |
196 | 197 | 2.961526 | ACTAGGTTGCTACGGACATG | 57.038 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
197 | 198 | 1.134788 | ACTAGGTTGCTACGGACATGC | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
198 | 199 | 0.177141 | TAGGTTGCTACGGACATGCC | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
199 | 200 | 1.376683 | GGTTGCTACGGACATGCCA | 60.377 | 57.895 | 0.00 | 0.00 | 35.94 | 4.92 |
200 | 201 | 1.369091 | GGTTGCTACGGACATGCCAG | 61.369 | 60.000 | 0.00 | 0.00 | 35.94 | 4.85 |
201 | 202 | 0.391130 | GTTGCTACGGACATGCCAGA | 60.391 | 55.000 | 0.00 | 0.00 | 35.94 | 3.86 |
202 | 203 | 0.323302 | TTGCTACGGACATGCCAGAA | 59.677 | 50.000 | 0.00 | 0.00 | 35.94 | 3.02 |
203 | 204 | 0.391130 | TGCTACGGACATGCCAGAAC | 60.391 | 55.000 | 0.00 | 0.00 | 35.94 | 3.01 |
204 | 205 | 1.090052 | GCTACGGACATGCCAGAACC | 61.090 | 60.000 | 0.00 | 0.00 | 35.94 | 3.62 |
205 | 206 | 0.249120 | CTACGGACATGCCAGAACCA | 59.751 | 55.000 | 0.00 | 0.00 | 35.94 | 3.67 |
206 | 207 | 0.687920 | TACGGACATGCCAGAACCAA | 59.312 | 50.000 | 0.00 | 0.00 | 35.94 | 3.67 |
207 | 208 | 0.889186 | ACGGACATGCCAGAACCAAC | 60.889 | 55.000 | 0.00 | 0.00 | 35.94 | 3.77 |
208 | 209 | 0.606401 | CGGACATGCCAGAACCAACT | 60.606 | 55.000 | 0.00 | 0.00 | 35.94 | 3.16 |
209 | 210 | 1.168714 | GGACATGCCAGAACCAACTC | 58.831 | 55.000 | 0.00 | 0.00 | 36.34 | 3.01 |
210 | 211 | 1.271597 | GGACATGCCAGAACCAACTCT | 60.272 | 52.381 | 0.00 | 0.00 | 36.34 | 3.24 |
211 | 212 | 2.027192 | GGACATGCCAGAACCAACTCTA | 60.027 | 50.000 | 0.00 | 0.00 | 36.34 | 2.43 |
212 | 213 | 3.559171 | GGACATGCCAGAACCAACTCTAA | 60.559 | 47.826 | 0.00 | 0.00 | 36.34 | 2.10 |
213 | 214 | 4.265073 | GACATGCCAGAACCAACTCTAAT | 58.735 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
214 | 215 | 4.012374 | ACATGCCAGAACCAACTCTAATG | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 1.90 |
215 | 216 | 3.071874 | TGCCAGAACCAACTCTAATGG | 57.928 | 47.619 | 0.00 | 0.00 | 43.84 | 3.16 |
216 | 217 | 1.745653 | GCCAGAACCAACTCTAATGGC | 59.254 | 52.381 | 0.00 | 0.00 | 44.27 | 4.40 |
217 | 218 | 3.071874 | CCAGAACCAACTCTAATGGCA | 57.928 | 47.619 | 0.00 | 0.00 | 41.89 | 4.92 |
218 | 219 | 3.624777 | CCAGAACCAACTCTAATGGCAT | 58.375 | 45.455 | 0.00 | 0.00 | 41.89 | 4.40 |
219 | 220 | 4.019174 | CCAGAACCAACTCTAATGGCATT | 58.981 | 43.478 | 18.01 | 18.01 | 41.89 | 3.56 |
220 | 221 | 5.192927 | CCAGAACCAACTCTAATGGCATTA | 58.807 | 41.667 | 18.33 | 18.33 | 41.89 | 1.90 |
221 | 222 | 5.652014 | CCAGAACCAACTCTAATGGCATTAA | 59.348 | 40.000 | 19.68 | 10.57 | 41.89 | 1.40 |
222 | 223 | 6.322201 | CCAGAACCAACTCTAATGGCATTAAT | 59.678 | 38.462 | 19.68 | 6.90 | 41.89 | 1.40 |
223 | 224 | 7.147846 | CCAGAACCAACTCTAATGGCATTAATT | 60.148 | 37.037 | 19.68 | 11.92 | 41.89 | 1.40 |
224 | 225 | 8.902806 | CAGAACCAACTCTAATGGCATTAATTA | 58.097 | 33.333 | 19.68 | 8.48 | 41.89 | 1.40 |
225 | 226 | 9.125026 | AGAACCAACTCTAATGGCATTAATTAG | 57.875 | 33.333 | 19.68 | 17.76 | 41.89 | 1.73 |
226 | 227 | 9.120538 | GAACCAACTCTAATGGCATTAATTAGA | 57.879 | 33.333 | 19.68 | 14.22 | 41.90 | 2.10 |
227 | 228 | 9.646522 | AACCAACTCTAATGGCATTAATTAGAT | 57.353 | 29.630 | 19.68 | 10.07 | 42.72 | 1.98 |
228 | 229 | 9.289782 | ACCAACTCTAATGGCATTAATTAGATC | 57.710 | 33.333 | 19.68 | 0.00 | 42.72 | 2.75 |
229 | 230 | 8.446273 | CCAACTCTAATGGCATTAATTAGATCG | 58.554 | 37.037 | 19.68 | 8.03 | 42.72 | 3.69 |
230 | 231 | 8.993121 | CAACTCTAATGGCATTAATTAGATCGT | 58.007 | 33.333 | 19.68 | 8.57 | 42.72 | 3.73 |
232 | 233 | 9.640963 | ACTCTAATGGCATTAATTAGATCGTAC | 57.359 | 33.333 | 19.68 | 0.00 | 42.72 | 3.67 |
233 | 234 | 8.683550 | TCTAATGGCATTAATTAGATCGTACG | 57.316 | 34.615 | 19.68 | 9.53 | 40.19 | 3.67 |
234 | 235 | 8.301720 | TCTAATGGCATTAATTAGATCGTACGT | 58.698 | 33.333 | 19.68 | 2.33 | 40.19 | 3.57 |
235 | 236 | 9.563898 | CTAATGGCATTAATTAGATCGTACGTA | 57.436 | 33.333 | 19.68 | 2.34 | 39.12 | 3.57 |
236 | 237 | 7.807687 | ATGGCATTAATTAGATCGTACGTAC | 57.192 | 36.000 | 15.90 | 15.90 | 0.00 | 3.67 |
237 | 238 | 6.973843 | TGGCATTAATTAGATCGTACGTACT | 58.026 | 36.000 | 22.55 | 16.77 | 0.00 | 2.73 |
238 | 239 | 7.428020 | TGGCATTAATTAGATCGTACGTACTT | 58.572 | 34.615 | 22.55 | 10.60 | 0.00 | 2.24 |
239 | 240 | 7.922278 | TGGCATTAATTAGATCGTACGTACTTT | 59.078 | 33.333 | 22.55 | 10.24 | 0.00 | 2.66 |
240 | 241 | 9.398170 | GGCATTAATTAGATCGTACGTACTTTA | 57.602 | 33.333 | 22.55 | 9.14 | 0.00 | 1.85 |
250 | 251 | 7.848051 | AGATCGTACGTACTTTACTGTAAATCG | 59.152 | 37.037 | 22.55 | 17.44 | 0.00 | 3.34 |
251 | 252 | 7.056002 | TCGTACGTACTTTACTGTAAATCGA | 57.944 | 36.000 | 22.55 | 17.19 | 0.00 | 3.59 |
252 | 253 | 7.173419 | TCGTACGTACTTTACTGTAAATCGAG | 58.827 | 38.462 | 22.55 | 13.80 | 0.00 | 4.04 |
253 | 254 | 6.955963 | CGTACGTACTTTACTGTAAATCGAGT | 59.044 | 38.462 | 22.55 | 17.31 | 0.00 | 4.18 |
254 | 255 | 7.045996 | CGTACGTACTTTACTGTAAATCGAGTG | 60.046 | 40.741 | 22.55 | 12.98 | 0.00 | 3.51 |
255 | 256 | 6.672147 | ACGTACTTTACTGTAAATCGAGTGT | 58.328 | 36.000 | 24.48 | 16.45 | 0.00 | 3.55 |
256 | 257 | 7.141363 | ACGTACTTTACTGTAAATCGAGTGTT | 58.859 | 34.615 | 24.48 | 10.43 | 0.00 | 3.32 |
257 | 258 | 7.649306 | ACGTACTTTACTGTAAATCGAGTGTTT | 59.351 | 33.333 | 24.48 | 9.99 | 0.00 | 2.83 |
258 | 259 | 9.117145 | CGTACTTTACTGTAAATCGAGTGTTTA | 57.883 | 33.333 | 12.95 | 0.00 | 0.00 | 2.01 |
304 | 305 | 3.234979 | TTTTTGCTCGGTATGGCGA | 57.765 | 47.368 | 0.00 | 0.00 | 0.00 | 5.54 |
305 | 306 | 1.745232 | TTTTTGCTCGGTATGGCGAT | 58.255 | 45.000 | 0.00 | 0.00 | 0.00 | 4.58 |
306 | 307 | 1.745232 | TTTTGCTCGGTATGGCGATT | 58.255 | 45.000 | 0.00 | 0.00 | 0.00 | 3.34 |
307 | 308 | 1.745232 | TTTGCTCGGTATGGCGATTT | 58.255 | 45.000 | 0.00 | 0.00 | 0.00 | 2.17 |
308 | 309 | 2.605837 | TTGCTCGGTATGGCGATTTA | 57.394 | 45.000 | 0.00 | 0.00 | 0.00 | 1.40 |
309 | 310 | 1.860676 | TGCTCGGTATGGCGATTTAC | 58.139 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
310 | 311 | 1.145803 | GCTCGGTATGGCGATTTACC | 58.854 | 55.000 | 0.00 | 0.00 | 35.52 | 2.85 |
314 | 315 | 1.792006 | GGTATGGCGATTTACCGAGG | 58.208 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
315 | 316 | 1.607251 | GGTATGGCGATTTACCGAGGG | 60.607 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
316 | 317 | 0.682852 | TATGGCGATTTACCGAGGGG | 59.317 | 55.000 | 0.00 | 0.00 | 40.11 | 4.79 |
317 | 318 | 2.590859 | GGCGATTTACCGAGGGGC | 60.591 | 66.667 | 0.00 | 0.00 | 36.48 | 5.80 |
318 | 319 | 2.965462 | GCGATTTACCGAGGGGCG | 60.965 | 66.667 | 0.00 | 0.00 | 36.48 | 6.13 |
319 | 320 | 2.965462 | CGATTTACCGAGGGGCGC | 60.965 | 66.667 | 0.00 | 0.00 | 39.11 | 6.53 |
320 | 321 | 2.965462 | GATTTACCGAGGGGCGCG | 60.965 | 66.667 | 0.00 | 0.00 | 39.11 | 6.86 |
327 | 328 | 2.965462 | CGAGGGGCGCGGAAATAC | 60.965 | 66.667 | 8.83 | 0.00 | 0.00 | 1.89 |
328 | 329 | 2.965462 | GAGGGGCGCGGAAATACG | 60.965 | 66.667 | 8.83 | 0.00 | 0.00 | 3.06 |
337 | 338 | 3.047752 | CGGAAATACGCGGTAACCA | 57.952 | 52.632 | 12.47 | 0.00 | 0.00 | 3.67 |
338 | 339 | 1.574134 | CGGAAATACGCGGTAACCAT | 58.426 | 50.000 | 12.47 | 0.00 | 0.00 | 3.55 |
339 | 340 | 1.259507 | CGGAAATACGCGGTAACCATG | 59.740 | 52.381 | 12.47 | 0.00 | 0.00 | 3.66 |
340 | 341 | 1.600485 | GGAAATACGCGGTAACCATGG | 59.400 | 52.381 | 11.19 | 11.19 | 0.00 | 3.66 |
341 | 342 | 1.600485 | GAAATACGCGGTAACCATGGG | 59.400 | 52.381 | 18.09 | 0.00 | 0.00 | 4.00 |
342 | 343 | 0.831966 | AATACGCGGTAACCATGGGA | 59.168 | 50.000 | 18.09 | 0.00 | 0.00 | 4.37 |
343 | 344 | 0.831966 | ATACGCGGTAACCATGGGAA | 59.168 | 50.000 | 18.09 | 0.00 | 0.00 | 3.97 |
344 | 345 | 0.612229 | TACGCGGTAACCATGGGAAA | 59.388 | 50.000 | 18.09 | 0.00 | 0.00 | 3.13 |
345 | 346 | 0.034863 | ACGCGGTAACCATGGGAAAT | 60.035 | 50.000 | 18.09 | 1.59 | 0.00 | 2.17 |
346 | 347 | 0.661020 | CGCGGTAACCATGGGAAATC | 59.339 | 55.000 | 18.09 | 0.00 | 0.00 | 2.17 |
347 | 348 | 1.745827 | CGCGGTAACCATGGGAAATCT | 60.746 | 52.381 | 18.09 | 0.00 | 0.00 | 2.40 |
348 | 349 | 2.375146 | GCGGTAACCATGGGAAATCTT | 58.625 | 47.619 | 18.09 | 2.18 | 0.00 | 2.40 |
349 | 350 | 2.099098 | GCGGTAACCATGGGAAATCTTG | 59.901 | 50.000 | 18.09 | 0.00 | 0.00 | 3.02 |
350 | 351 | 3.616219 | CGGTAACCATGGGAAATCTTGA | 58.384 | 45.455 | 18.09 | 0.00 | 0.00 | 3.02 |
351 | 352 | 4.013728 | CGGTAACCATGGGAAATCTTGAA | 58.986 | 43.478 | 18.09 | 0.00 | 0.00 | 2.69 |
352 | 353 | 4.461081 | CGGTAACCATGGGAAATCTTGAAA | 59.539 | 41.667 | 18.09 | 0.00 | 0.00 | 2.69 |
353 | 354 | 5.127031 | CGGTAACCATGGGAAATCTTGAAAT | 59.873 | 40.000 | 18.09 | 0.00 | 0.00 | 2.17 |
354 | 355 | 6.350949 | CGGTAACCATGGGAAATCTTGAAATT | 60.351 | 38.462 | 18.09 | 0.00 | 0.00 | 1.82 |
355 | 356 | 7.394016 | GGTAACCATGGGAAATCTTGAAATTT | 58.606 | 34.615 | 18.09 | 0.00 | 0.00 | 1.82 |
356 | 357 | 7.549134 | GGTAACCATGGGAAATCTTGAAATTTC | 59.451 | 37.037 | 18.09 | 11.41 | 42.41 | 2.17 |
357 | 358 | 6.684897 | ACCATGGGAAATCTTGAAATTTCA | 57.315 | 33.333 | 16.91 | 16.91 | 44.09 | 2.69 |
358 | 359 | 7.077050 | ACCATGGGAAATCTTGAAATTTCAA | 57.923 | 32.000 | 27.39 | 27.39 | 44.09 | 2.69 |
359 | 360 | 6.936335 | ACCATGGGAAATCTTGAAATTTCAAC | 59.064 | 34.615 | 26.01 | 16.89 | 44.09 | 3.18 |
360 | 361 | 7.163441 | CCATGGGAAATCTTGAAATTTCAACT | 58.837 | 34.615 | 26.01 | 15.23 | 44.09 | 3.16 |
361 | 362 | 7.118680 | CCATGGGAAATCTTGAAATTTCAACTG | 59.881 | 37.037 | 26.01 | 18.47 | 44.09 | 3.16 |
362 | 363 | 6.523840 | TGGGAAATCTTGAAATTTCAACTGG | 58.476 | 36.000 | 26.01 | 17.85 | 44.09 | 4.00 |
363 | 364 | 6.099557 | TGGGAAATCTTGAAATTTCAACTGGT | 59.900 | 34.615 | 26.01 | 13.52 | 44.09 | 4.00 |
364 | 365 | 7.288852 | TGGGAAATCTTGAAATTTCAACTGGTA | 59.711 | 33.333 | 26.01 | 11.88 | 44.09 | 3.25 |
365 | 366 | 8.147704 | GGGAAATCTTGAAATTTCAACTGGTAA | 58.852 | 33.333 | 26.01 | 7.76 | 44.09 | 2.85 |
366 | 367 | 8.978539 | GGAAATCTTGAAATTTCAACTGGTAAC | 58.021 | 33.333 | 26.01 | 14.80 | 44.09 | 2.50 |
367 | 368 | 8.887036 | AAATCTTGAAATTTCAACTGGTAACC | 57.113 | 30.769 | 26.01 | 0.00 | 41.88 | 2.85 |
368 | 369 | 7.595819 | ATCTTGAAATTTCAACTGGTAACCA | 57.404 | 32.000 | 26.01 | 5.74 | 41.88 | 3.67 |
369 | 370 | 7.411486 | TCTTGAAATTTCAACTGGTAACCAA | 57.589 | 32.000 | 26.01 | 5.26 | 41.88 | 3.67 |
370 | 371 | 7.841956 | TCTTGAAATTTCAACTGGTAACCAAA | 58.158 | 30.769 | 26.01 | 5.08 | 41.88 | 3.28 |
371 | 372 | 8.314751 | TCTTGAAATTTCAACTGGTAACCAAAA | 58.685 | 29.630 | 26.01 | 4.67 | 41.88 | 2.44 |
372 | 373 | 7.835634 | TGAAATTTCAACTGGTAACCAAAAC | 57.164 | 32.000 | 18.45 | 0.00 | 33.55 | 2.43 |
373 | 374 | 6.819146 | TGAAATTTCAACTGGTAACCAAAACC | 59.181 | 34.615 | 18.45 | 0.00 | 34.26 | 3.27 |
374 | 375 | 6.553953 | AATTTCAACTGGTAACCAAAACCT | 57.446 | 33.333 | 0.00 | 0.00 | 37.91 | 3.50 |
375 | 376 | 6.553953 | ATTTCAACTGGTAACCAAAACCTT | 57.446 | 33.333 | 0.00 | 0.00 | 37.91 | 3.50 |
376 | 377 | 4.993029 | TCAACTGGTAACCAAAACCTTG | 57.007 | 40.909 | 0.00 | 0.00 | 37.91 | 3.61 |
385 | 386 | 1.775385 | CCAAAACCTTGGTGTGGACT | 58.225 | 50.000 | 14.34 | 0.00 | 46.25 | 3.85 |
387 | 388 | 2.621526 | CCAAAACCTTGGTGTGGACTAC | 59.378 | 50.000 | 14.34 | 0.00 | 46.25 | 2.73 |
393 | 394 | 3.454812 | ACCTTGGTGTGGACTACCATATC | 59.545 | 47.826 | 0.00 | 0.00 | 46.81 | 1.63 |
397 | 398 | 5.030147 | TTGGTGTGGACTACCATATCTCTT | 58.970 | 41.667 | 0.00 | 0.00 | 46.81 | 2.85 |
421 | 422 | 3.641046 | CCACATATGGGTTGGATTTGGA | 58.359 | 45.455 | 7.80 | 0.00 | 43.04 | 3.53 |
425 | 426 | 4.170647 | ACATATGGGTTGGATTTGGAGGAT | 59.829 | 41.667 | 7.80 | 0.00 | 0.00 | 3.24 |
465 | 466 | 1.415672 | TTTTGGAGAGTCCGCTGGGT | 61.416 | 55.000 | 0.00 | 0.00 | 40.17 | 4.51 |
466 | 467 | 0.543410 | TTTGGAGAGTCCGCTGGGTA | 60.543 | 55.000 | 0.00 | 0.00 | 40.17 | 3.69 |
490 | 491 | 5.952947 | ACCTGCTAGATATCTAAATACGCCT | 59.047 | 40.000 | 13.41 | 0.00 | 0.00 | 5.52 |
512 | 513 | 5.451520 | CCTGGACGTACGAGGAAGAAATAAT | 60.452 | 44.000 | 24.41 | 0.00 | 45.50 | 1.28 |
513 | 514 | 5.585390 | TGGACGTACGAGGAAGAAATAATC | 58.415 | 41.667 | 24.41 | 3.61 | 0.00 | 1.75 |
514 | 515 | 5.359009 | TGGACGTACGAGGAAGAAATAATCT | 59.641 | 40.000 | 24.41 | 0.00 | 41.32 | 2.40 |
562 | 579 | 9.685276 | TTATTTATATGCATTCTATCCCACAGG | 57.315 | 33.333 | 3.54 | 0.00 | 0.00 | 4.00 |
588 | 605 | 4.441415 | CGCTTCGGCATTCTACTAGTAAAG | 59.559 | 45.833 | 3.76 | 3.54 | 41.88 | 1.85 |
596 | 613 | 7.201530 | CGGCATTCTACTAGTAAAGGAAGTTTG | 60.202 | 40.741 | 3.76 | 2.07 | 0.00 | 2.93 |
607 | 624 | 7.982224 | AGTAAAGGAAGTTTGACAGTGTAAAC | 58.018 | 34.615 | 15.04 | 15.04 | 37.12 | 2.01 |
623 | 640 | 4.448060 | GTGTAAACGAAAGCTAGCAGACTT | 59.552 | 41.667 | 18.83 | 4.25 | 0.00 | 3.01 |
690 | 713 | 2.472909 | GCAGAGCCCATACCGCAAC | 61.473 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
820 | 858 | 2.817258 | CCGTTTCCAAGCCAACTAATGA | 59.183 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
826 | 864 | 2.025887 | CCAAGCCAACTAATGACTCCCT | 60.026 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1043 | 1117 | 3.987404 | GCTCAACGCCCACATCTT | 58.013 | 55.556 | 0.00 | 0.00 | 0.00 | 2.40 |
1081 | 1155 | 2.285743 | GCCCACTCCCCTCCTCTT | 60.286 | 66.667 | 0.00 | 0.00 | 0.00 | 2.85 |
1087 | 1161 | 0.041982 | ACTCCCCTCCTCTTCAGTCC | 59.958 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1166 | 1252 | 2.860293 | CGTGCGTGGTTGATGTCC | 59.140 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
1244 | 1332 | 3.130160 | GAGCTTGCCCGCCTCTTG | 61.130 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
1491 | 1590 | 2.175202 | TCTCTCTCTTCCACCAGCTTC | 58.825 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
1540 | 1657 | 4.327357 | CGCGATTCAGATCTGTTTGTACTT | 59.673 | 41.667 | 21.92 | 0.24 | 0.00 | 2.24 |
1545 | 1662 | 4.065088 | TCAGATCTGTTTGTACTTGGCAC | 58.935 | 43.478 | 21.92 | 0.00 | 0.00 | 5.01 |
1547 | 1664 | 4.067896 | AGATCTGTTTGTACTTGGCACTG | 58.932 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
1548 | 1665 | 3.275617 | TCTGTTTGTACTTGGCACTGT | 57.724 | 42.857 | 0.00 | 0.00 | 0.00 | 3.55 |
1635 | 1841 | 6.910433 | GTGATGATAAAGTGTTGTCGTTTTGT | 59.090 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
1675 | 1928 | 9.995003 | ATTAGTGATCTTCTATCTTGTTCATCC | 57.005 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
1730 | 1986 | 6.040616 | ACACCGATGTTGTTTTTATTTGGGTA | 59.959 | 34.615 | 0.00 | 0.00 | 34.46 | 3.69 |
1799 | 2057 | 2.745884 | CATTTCTGGCGGCCGTCA | 60.746 | 61.111 | 33.19 | 33.19 | 0.00 | 4.35 |
1812 | 2070 | 3.887621 | GGCCGTCATATAGCCATAGAA | 57.112 | 47.619 | 0.00 | 0.00 | 46.34 | 2.10 |
1935 | 2239 | 3.704566 | AGTGCCATTATTCTAGGTCGACA | 59.295 | 43.478 | 18.91 | 0.00 | 0.00 | 4.35 |
1977 | 2283 | 7.701539 | TTATAAGCATGGCTGGTATTAATGG | 57.298 | 36.000 | 0.00 | 0.00 | 39.62 | 3.16 |
2057 | 2363 | 5.883115 | TGTTGTTTCTATTCAGGTGTGTCAA | 59.117 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2075 | 2388 | 0.249741 | AACAGCAGGGTGTGTACGTC | 60.250 | 55.000 | 4.73 | 0.00 | 0.00 | 4.34 |
2076 | 2389 | 1.365999 | CAGCAGGGTGTGTACGTCA | 59.634 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
2077 | 2390 | 0.249699 | CAGCAGGGTGTGTACGTCAA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2099 | 2412 | 2.198827 | TGGGCGTCATTTGAATGTCT | 57.801 | 45.000 | 3.85 | 0.00 | 37.65 | 3.41 |
2152 | 2465 | 9.906660 | TTAGTTGTGTTTCATGTAATGGAATTC | 57.093 | 29.630 | 0.00 | 0.00 | 45.16 | 2.17 |
2215 | 2529 | 3.126171 | TGTCGTTTTGTATACATGCTGGC | 59.874 | 43.478 | 6.36 | 0.18 | 0.00 | 4.85 |
2365 | 2694 | 9.955208 | CAAATATGCTTATGTGTATCAACATGT | 57.045 | 29.630 | 0.00 | 0.00 | 40.93 | 3.21 |
2386 | 2715 | 9.561069 | ACATGTCTCACTGTTTAATAAGTTTCT | 57.439 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
2468 | 2798 | 2.763273 | CGCCTGCATGCATTTCGGA | 61.763 | 57.895 | 22.97 | 0.00 | 0.00 | 4.55 |
2479 | 2809 | 5.049198 | GCATGCATTTCGGAGATTTCTATGA | 60.049 | 40.000 | 14.21 | 0.00 | 35.04 | 2.15 |
2668 | 3003 | 3.884693 | TGCTTTGCTTTCTCACTTCATCA | 59.115 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
2710 | 3048 | 6.524734 | ACTCGGTTCATTATCTCAATATGCA | 58.475 | 36.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2713 | 3051 | 8.219546 | TCGGTTCATTATCTCAATATGCAAAA | 57.780 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
2751 | 3089 | 4.730966 | TGTAATTTGTTGGCCCTTGTCTA | 58.269 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
2759 | 3097 | 3.695830 | TGGCCCTTGTCTACTGTTTAG | 57.304 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
2852 | 3198 | 7.709613 | TCAAGTCAGTTCTGTTAACCTCTTTAC | 59.290 | 37.037 | 2.48 | 0.00 | 0.00 | 2.01 |
2871 | 3218 | 9.208022 | CTCTTTACAATTTGACTGTGTGATCTA | 57.792 | 33.333 | 2.79 | 0.00 | 0.00 | 1.98 |
3126 | 3477 | 5.130477 | TGGAGTACTTTGTTTGAGGTCTCTT | 59.870 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3128 | 3479 | 7.016268 | TGGAGTACTTTGTTTGAGGTCTCTTAT | 59.984 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
3130 | 3481 | 9.924650 | GAGTACTTTGTTTGAGGTCTCTTATAA | 57.075 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
3144 | 3495 | 6.311690 | GGTCTCTTATAATTTCATCTAGCCGC | 59.688 | 42.308 | 0.00 | 0.00 | 0.00 | 6.53 |
3303 | 3659 | 5.114764 | TGGCTGATTAGTGAAATGATGGA | 57.885 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3337 | 3693 | 6.658816 | ACCATTATGTGCAATAGACTTGTCAA | 59.341 | 34.615 | 3.49 | 0.00 | 0.00 | 3.18 |
3567 | 3931 | 3.991773 | CGTGAAACCAGACGAGGATTTTA | 59.008 | 43.478 | 0.00 | 0.00 | 37.81 | 1.52 |
3571 | 3935 | 1.134788 | ACCAGACGAGGATTTTAGCGG | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
3572 | 3936 | 0.931005 | CAGACGAGGATTTTAGCGGC | 59.069 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
3601 | 3965 | 5.805728 | ACTTTGGTCTCATAACCCTGTAAG | 58.194 | 41.667 | 0.00 | 0.00 | 38.65 | 2.34 |
3623 | 3987 | 3.691498 | CGAAACTTGTTGTCCTTTGTCC | 58.309 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
3624 | 3988 | 3.691498 | GAAACTTGTTGTCCTTTGTCCG | 58.309 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
3765 | 4133 | 4.955811 | TGTGTTGGCTTCTCTCTCTAAA | 57.044 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
3788 | 4156 | 0.234884 | GTCGTGTTGTTGGCTAGTGC | 59.765 | 55.000 | 0.00 | 0.00 | 38.76 | 4.40 |
3856 | 4224 | 7.509546 | TCTCTTTTTGGTCTGTAATCTTCAGT | 58.490 | 34.615 | 0.00 | 0.00 | 34.86 | 3.41 |
3931 | 4299 | 6.103997 | CGGCAAAGTAGAGGTGATAGTTTTA | 58.896 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
3933 | 4301 | 7.104290 | GGCAAAGTAGAGGTGATAGTTTTACT | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
3938 | 4306 | 3.118738 | AGAGGTGATAGTTTTACTGGGCG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
3959 | 4327 | 1.077930 | ATGCAGGCATGACGAAGCT | 60.078 | 52.632 | 0.62 | 0.00 | 35.03 | 3.74 |
3963 | 4331 | 2.747460 | GGCATGACGAAGCTGGCA | 60.747 | 61.111 | 0.00 | 0.00 | 35.68 | 4.92 |
4113 | 4481 | 3.196469 | TCCAAATAGTCAGCTCTCCACTG | 59.804 | 47.826 | 0.00 | 0.00 | 36.44 | 3.66 |
4301 | 4669 | 9.190317 | AGAACTTTCATAAATGATAACCCCTTC | 57.810 | 33.333 | 0.00 | 0.00 | 36.56 | 3.46 |
4309 | 4677 | 8.846211 | CATAAATGATAACCCCTTCGTTACAAT | 58.154 | 33.333 | 0.00 | 0.00 | 31.25 | 2.71 |
4340 | 4708 | 4.324402 | GCAAGCATCACAATAAGAAAACCG | 59.676 | 41.667 | 0.00 | 0.00 | 0.00 | 4.44 |
4379 | 4747 | 5.707298 | AGTGTGATTTCCAACACATCTTAGG | 59.293 | 40.000 | 8.48 | 0.00 | 46.20 | 2.69 |
4424 | 4794 | 9.238368 | TGCAAAATATATAGGTATAAGCCAACC | 57.762 | 33.333 | 0.00 | 0.00 | 35.91 | 3.77 |
4433 | 4803 | 6.530019 | AGGTATAAGCCAACCTGATTTTTG | 57.470 | 37.500 | 0.00 | 0.00 | 44.53 | 2.44 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.418047 | CCTCATTCGGTAACCAAAACCT | 58.582 | 45.455 | 0.00 | 0.00 | 34.66 | 3.50 |
1 | 2 | 2.094906 | GCCTCATTCGGTAACCAAAACC | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2 | 3 | 2.554893 | TGCCTCATTCGGTAACCAAAAC | 59.445 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
3 | 4 | 2.865079 | TGCCTCATTCGGTAACCAAAA | 58.135 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
4 | 5 | 2.570415 | TGCCTCATTCGGTAACCAAA | 57.430 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
5 | 6 | 2.570415 | TTGCCTCATTCGGTAACCAA | 57.430 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6 | 7 | 2.799126 | ATTGCCTCATTCGGTAACCA | 57.201 | 45.000 | 0.00 | 0.00 | 31.36 | 3.67 |
7 | 8 | 4.450082 | AAAATTGCCTCATTCGGTAACC | 57.550 | 40.909 | 0.00 | 0.00 | 31.36 | 2.85 |
8 | 9 | 5.337554 | GGTAAAATTGCCTCATTCGGTAAC | 58.662 | 41.667 | 0.00 | 0.00 | 31.36 | 2.50 |
9 | 10 | 4.095185 | CGGTAAAATTGCCTCATTCGGTAA | 59.905 | 41.667 | 0.00 | 0.00 | 33.14 | 2.85 |
10 | 11 | 3.623960 | CGGTAAAATTGCCTCATTCGGTA | 59.376 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
11 | 12 | 2.422127 | CGGTAAAATTGCCTCATTCGGT | 59.578 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
12 | 13 | 2.680841 | TCGGTAAAATTGCCTCATTCGG | 59.319 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
13 | 14 | 3.242739 | CCTCGGTAAAATTGCCTCATTCG | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.34 |
14 | 15 | 3.945285 | TCCTCGGTAAAATTGCCTCATTC | 59.055 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
15 | 16 | 3.947834 | CTCCTCGGTAAAATTGCCTCATT | 59.052 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
16 | 17 | 3.545703 | CTCCTCGGTAAAATTGCCTCAT | 58.454 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
17 | 18 | 2.355716 | CCTCCTCGGTAAAATTGCCTCA | 60.356 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
18 | 19 | 2.093128 | TCCTCCTCGGTAAAATTGCCTC | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
19 | 20 | 1.913419 | TCCTCCTCGGTAAAATTGCCT | 59.087 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
20 | 21 | 2.014857 | GTCCTCCTCGGTAAAATTGCC | 58.985 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
21 | 22 | 1.664151 | CGTCCTCCTCGGTAAAATTGC | 59.336 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
22 | 23 | 2.277084 | CCGTCCTCCTCGGTAAAATTG | 58.723 | 52.381 | 0.00 | 0.00 | 42.62 | 2.32 |
23 | 24 | 1.208776 | CCCGTCCTCCTCGGTAAAATT | 59.791 | 52.381 | 3.78 | 0.00 | 45.63 | 1.82 |
24 | 25 | 0.828677 | CCCGTCCTCCTCGGTAAAAT | 59.171 | 55.000 | 3.78 | 0.00 | 45.63 | 1.82 |
25 | 26 | 0.542702 | ACCCGTCCTCCTCGGTAAAA | 60.543 | 55.000 | 3.78 | 0.00 | 45.63 | 1.52 |
26 | 27 | 0.331278 | TACCCGTCCTCCTCGGTAAA | 59.669 | 55.000 | 3.78 | 0.00 | 45.63 | 2.01 |
27 | 28 | 0.331278 | TTACCCGTCCTCCTCGGTAA | 59.669 | 55.000 | 3.78 | 0.00 | 45.63 | 2.85 |
28 | 29 | 0.331278 | TTTACCCGTCCTCCTCGGTA | 59.669 | 55.000 | 3.78 | 0.00 | 45.63 | 4.02 |
29 | 30 | 0.325016 | ATTTACCCGTCCTCCTCGGT | 60.325 | 55.000 | 3.78 | 0.00 | 45.63 | 4.69 |
30 | 31 | 0.104304 | CATTTACCCGTCCTCCTCGG | 59.896 | 60.000 | 0.00 | 0.00 | 46.49 | 4.63 |
31 | 32 | 0.822164 | ACATTTACCCGTCCTCCTCG | 59.178 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
32 | 33 | 1.134491 | CCACATTTACCCGTCCTCCTC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.71 |
33 | 34 | 0.909623 | CCACATTTACCCGTCCTCCT | 59.090 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
34 | 35 | 0.616891 | ACCACATTTACCCGTCCTCC | 59.383 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
35 | 36 | 2.484742 | AACCACATTTACCCGTCCTC | 57.515 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
36 | 37 | 2.026915 | GGTAACCACATTTACCCGTCCT | 60.027 | 50.000 | 1.21 | 0.00 | 43.73 | 3.85 |
37 | 38 | 2.358957 | GGTAACCACATTTACCCGTCC | 58.641 | 52.381 | 1.21 | 0.00 | 43.73 | 4.79 |
60 | 61 | 3.508744 | TCTCGGTATTTGTCGGTAACC | 57.491 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
61 | 62 | 6.019559 | GGTATTTCTCGGTATTTGTCGGTAAC | 60.020 | 42.308 | 0.00 | 0.00 | 0.00 | 2.50 |
62 | 63 | 6.042143 | GGTATTTCTCGGTATTTGTCGGTAA | 58.958 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
63 | 64 | 5.591099 | GGTATTTCTCGGTATTTGTCGGTA | 58.409 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
64 | 65 | 4.436332 | GGTATTTCTCGGTATTTGTCGGT | 58.564 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
65 | 66 | 3.488310 | CGGTATTTCTCGGTATTTGTCGG | 59.512 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
66 | 67 | 4.353737 | TCGGTATTTCTCGGTATTTGTCG | 58.646 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
67 | 68 | 5.585390 | TCTCGGTATTTCTCGGTATTTGTC | 58.415 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
68 | 69 | 5.587388 | TCTCGGTATTTCTCGGTATTTGT | 57.413 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
69 | 70 | 8.758633 | ATATTCTCGGTATTTCTCGGTATTTG | 57.241 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
70 | 71 | 9.774413 | AAATATTCTCGGTATTTCTCGGTATTT | 57.226 | 29.630 | 0.00 | 0.00 | 28.29 | 1.40 |
71 | 72 | 9.420551 | GAAATATTCTCGGTATTTCTCGGTATT | 57.579 | 33.333 | 9.99 | 0.00 | 41.76 | 1.89 |
72 | 73 | 7.754027 | CGAAATATTCTCGGTATTTCTCGGTAT | 59.246 | 37.037 | 13.53 | 0.00 | 42.35 | 2.73 |
73 | 74 | 7.041167 | TCGAAATATTCTCGGTATTTCTCGGTA | 60.041 | 37.037 | 15.30 | 0.00 | 42.35 | 4.02 |
74 | 75 | 5.919141 | CGAAATATTCTCGGTATTTCTCGGT | 59.081 | 40.000 | 13.53 | 0.00 | 42.35 | 4.69 |
75 | 76 | 6.147581 | TCGAAATATTCTCGGTATTTCTCGG | 58.852 | 40.000 | 15.30 | 3.07 | 42.35 | 4.63 |
76 | 77 | 6.183359 | GCTCGAAATATTCTCGGTATTTCTCG | 60.183 | 42.308 | 15.30 | 6.03 | 42.35 | 4.04 |
77 | 78 | 6.183359 | CGCTCGAAATATTCTCGGTATTTCTC | 60.183 | 42.308 | 15.30 | 5.41 | 42.35 | 2.87 |
78 | 79 | 5.629849 | CGCTCGAAATATTCTCGGTATTTCT | 59.370 | 40.000 | 15.30 | 0.00 | 42.35 | 2.52 |
79 | 80 | 5.628193 | TCGCTCGAAATATTCTCGGTATTTC | 59.372 | 40.000 | 15.30 | 8.01 | 41.66 | 2.17 |
80 | 81 | 5.526115 | TCGCTCGAAATATTCTCGGTATTT | 58.474 | 37.500 | 15.30 | 0.00 | 36.93 | 1.40 |
81 | 82 | 5.117355 | TCGCTCGAAATATTCTCGGTATT | 57.883 | 39.130 | 15.30 | 0.00 | 36.93 | 1.89 |
82 | 83 | 4.761235 | TCGCTCGAAATATTCTCGGTAT | 57.239 | 40.909 | 15.30 | 0.00 | 36.93 | 2.73 |
83 | 84 | 4.556942 | TTCGCTCGAAATATTCTCGGTA | 57.443 | 40.909 | 15.30 | 2.71 | 36.93 | 4.02 |
84 | 85 | 3.431922 | TTCGCTCGAAATATTCTCGGT | 57.568 | 42.857 | 15.30 | 0.00 | 36.93 | 4.69 |
85 | 86 | 4.974103 | AATTCGCTCGAAATATTCTCGG | 57.026 | 40.909 | 8.84 | 9.94 | 37.69 | 4.63 |
86 | 87 | 9.663491 | CTATAAAATTCGCTCGAAATATTCTCG | 57.337 | 33.333 | 8.84 | 11.44 | 37.69 | 4.04 |
94 | 95 | 9.834628 | AAATTCAACTATAAAATTCGCTCGAAA | 57.165 | 25.926 | 8.84 | 0.00 | 37.69 | 3.46 |
95 | 96 | 9.834628 | AAAATTCAACTATAAAATTCGCTCGAA | 57.165 | 25.926 | 7.19 | 7.19 | 38.59 | 3.71 |
96 | 97 | 9.272901 | CAAAATTCAACTATAAAATTCGCTCGA | 57.727 | 29.630 | 0.00 | 0.00 | 0.00 | 4.04 |
97 | 98 | 9.272901 | TCAAAATTCAACTATAAAATTCGCTCG | 57.727 | 29.630 | 0.00 | 0.00 | 0.00 | 5.03 |
120 | 121 | 9.958234 | TTCGTTCATTCACTTATTTGAATTCAA | 57.042 | 25.926 | 16.91 | 16.91 | 42.45 | 2.69 |
131 | 132 | 9.004717 | TGGTTTGAATATTCGTTCATTCACTTA | 57.995 | 29.630 | 10.80 | 0.00 | 40.06 | 2.24 |
132 | 133 | 7.881142 | TGGTTTGAATATTCGTTCATTCACTT | 58.119 | 30.769 | 10.80 | 0.00 | 40.06 | 3.16 |
133 | 134 | 7.362056 | CCTGGTTTGAATATTCGTTCATTCACT | 60.362 | 37.037 | 10.80 | 0.00 | 40.06 | 3.41 |
134 | 135 | 6.747280 | CCTGGTTTGAATATTCGTTCATTCAC | 59.253 | 38.462 | 10.80 | 0.00 | 40.06 | 3.18 |
135 | 136 | 6.127758 | CCCTGGTTTGAATATTCGTTCATTCA | 60.128 | 38.462 | 10.80 | 4.85 | 38.93 | 2.57 |
136 | 137 | 6.094881 | TCCCTGGTTTGAATATTCGTTCATTC | 59.905 | 38.462 | 10.80 | 0.00 | 37.88 | 2.67 |
137 | 138 | 5.949354 | TCCCTGGTTTGAATATTCGTTCATT | 59.051 | 36.000 | 10.80 | 0.00 | 37.88 | 2.57 |
138 | 139 | 5.357032 | GTCCCTGGTTTGAATATTCGTTCAT | 59.643 | 40.000 | 10.80 | 0.00 | 37.88 | 2.57 |
139 | 140 | 4.698304 | GTCCCTGGTTTGAATATTCGTTCA | 59.302 | 41.667 | 10.80 | 5.87 | 36.38 | 3.18 |
140 | 141 | 4.095932 | GGTCCCTGGTTTGAATATTCGTTC | 59.904 | 45.833 | 10.80 | 3.54 | 0.00 | 3.95 |
141 | 142 | 4.014406 | GGTCCCTGGTTTGAATATTCGTT | 58.986 | 43.478 | 10.80 | 0.00 | 0.00 | 3.85 |
142 | 143 | 3.265995 | AGGTCCCTGGTTTGAATATTCGT | 59.734 | 43.478 | 10.80 | 0.00 | 0.00 | 3.85 |
143 | 144 | 3.877508 | GAGGTCCCTGGTTTGAATATTCG | 59.122 | 47.826 | 10.80 | 0.00 | 0.00 | 3.34 |
144 | 145 | 5.117406 | AGAGGTCCCTGGTTTGAATATTC | 57.883 | 43.478 | 8.60 | 8.60 | 0.00 | 1.75 |
145 | 146 | 4.540099 | TGAGAGGTCCCTGGTTTGAATATT | 59.460 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
146 | 147 | 4.111577 | TGAGAGGTCCCTGGTTTGAATAT | 58.888 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
147 | 148 | 3.526899 | TGAGAGGTCCCTGGTTTGAATA | 58.473 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
148 | 149 | 2.348472 | TGAGAGGTCCCTGGTTTGAAT | 58.652 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
149 | 150 | 1.814429 | TGAGAGGTCCCTGGTTTGAA | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
150 | 151 | 1.814429 | TTGAGAGGTCCCTGGTTTGA | 58.186 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
151 | 152 | 2.623416 | GTTTTGAGAGGTCCCTGGTTTG | 59.377 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
152 | 153 | 2.243736 | TGTTTTGAGAGGTCCCTGGTTT | 59.756 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
153 | 154 | 1.850345 | TGTTTTGAGAGGTCCCTGGTT | 59.150 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
154 | 155 | 1.421646 | CTGTTTTGAGAGGTCCCTGGT | 59.578 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
155 | 156 | 1.271597 | CCTGTTTTGAGAGGTCCCTGG | 60.272 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
156 | 157 | 1.699634 | TCCTGTTTTGAGAGGTCCCTG | 59.300 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
157 | 158 | 2.106684 | GTTCCTGTTTTGAGAGGTCCCT | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
158 | 159 | 2.106684 | AGTTCCTGTTTTGAGAGGTCCC | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
159 | 160 | 3.493767 | AGTTCCTGTTTTGAGAGGTCC | 57.506 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
160 | 161 | 4.040584 | ACCTAGTTCCTGTTTTGAGAGGTC | 59.959 | 45.833 | 0.00 | 0.00 | 28.54 | 3.85 |
161 | 162 | 3.974642 | ACCTAGTTCCTGTTTTGAGAGGT | 59.025 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
162 | 163 | 4.625607 | ACCTAGTTCCTGTTTTGAGAGG | 57.374 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
163 | 164 | 4.214332 | GCAACCTAGTTCCTGTTTTGAGAG | 59.786 | 45.833 | 0.00 | 0.00 | 0.00 | 3.20 |
164 | 165 | 4.134563 | GCAACCTAGTTCCTGTTTTGAGA | 58.865 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
165 | 166 | 4.137543 | AGCAACCTAGTTCCTGTTTTGAG | 58.862 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
166 | 167 | 4.164843 | AGCAACCTAGTTCCTGTTTTGA | 57.835 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
167 | 168 | 4.084013 | CGTAGCAACCTAGTTCCTGTTTTG | 60.084 | 45.833 | 0.00 | 0.00 | 0.00 | 2.44 |
168 | 169 | 4.062991 | CGTAGCAACCTAGTTCCTGTTTT | 58.937 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
169 | 170 | 3.556423 | CCGTAGCAACCTAGTTCCTGTTT | 60.556 | 47.826 | 0.00 | 0.00 | 0.00 | 2.83 |
170 | 171 | 2.028385 | CCGTAGCAACCTAGTTCCTGTT | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
171 | 172 | 1.549170 | CCGTAGCAACCTAGTTCCTGT | 59.451 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
172 | 173 | 1.822990 | TCCGTAGCAACCTAGTTCCTG | 59.177 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
173 | 174 | 1.823610 | GTCCGTAGCAACCTAGTTCCT | 59.176 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
174 | 175 | 1.547372 | TGTCCGTAGCAACCTAGTTCC | 59.453 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
175 | 176 | 3.187700 | CATGTCCGTAGCAACCTAGTTC | 58.812 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
176 | 177 | 2.677037 | GCATGTCCGTAGCAACCTAGTT | 60.677 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
177 | 178 | 1.134788 | GCATGTCCGTAGCAACCTAGT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
178 | 179 | 1.571919 | GCATGTCCGTAGCAACCTAG | 58.428 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
179 | 180 | 0.177141 | GGCATGTCCGTAGCAACCTA | 59.823 | 55.000 | 0.00 | 0.00 | 0.00 | 3.08 |
180 | 181 | 1.078426 | GGCATGTCCGTAGCAACCT | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 3.50 |
181 | 182 | 1.369091 | CTGGCATGTCCGTAGCAACC | 61.369 | 60.000 | 0.00 | 0.00 | 37.80 | 3.77 |
182 | 183 | 0.391130 | TCTGGCATGTCCGTAGCAAC | 60.391 | 55.000 | 0.00 | 0.00 | 37.80 | 4.17 |
183 | 184 | 0.323302 | TTCTGGCATGTCCGTAGCAA | 59.677 | 50.000 | 0.00 | 0.00 | 37.80 | 3.91 |
184 | 185 | 0.391130 | GTTCTGGCATGTCCGTAGCA | 60.391 | 55.000 | 0.00 | 0.00 | 37.80 | 3.49 |
185 | 186 | 1.090052 | GGTTCTGGCATGTCCGTAGC | 61.090 | 60.000 | 0.00 | 0.00 | 37.80 | 3.58 |
186 | 187 | 0.249120 | TGGTTCTGGCATGTCCGTAG | 59.751 | 55.000 | 0.00 | 0.00 | 37.80 | 3.51 |
187 | 188 | 0.687920 | TTGGTTCTGGCATGTCCGTA | 59.312 | 50.000 | 0.00 | 0.00 | 37.80 | 4.02 |
188 | 189 | 0.889186 | GTTGGTTCTGGCATGTCCGT | 60.889 | 55.000 | 0.00 | 0.00 | 37.80 | 4.69 |
189 | 190 | 0.606401 | AGTTGGTTCTGGCATGTCCG | 60.606 | 55.000 | 0.00 | 0.00 | 37.80 | 4.79 |
190 | 191 | 1.168714 | GAGTTGGTTCTGGCATGTCC | 58.831 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
191 | 192 | 2.191128 | AGAGTTGGTTCTGGCATGTC | 57.809 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
192 | 193 | 3.788227 | TTAGAGTTGGTTCTGGCATGT | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 3.21 |
193 | 194 | 3.379372 | CCATTAGAGTTGGTTCTGGCATG | 59.621 | 47.826 | 0.00 | 0.00 | 0.00 | 4.06 |
194 | 195 | 3.624777 | CCATTAGAGTTGGTTCTGGCAT | 58.375 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
195 | 196 | 2.879756 | GCCATTAGAGTTGGTTCTGGCA | 60.880 | 50.000 | 5.82 | 0.00 | 35.16 | 4.92 |
196 | 197 | 1.745653 | GCCATTAGAGTTGGTTCTGGC | 59.254 | 52.381 | 0.00 | 0.00 | 36.57 | 4.85 |
197 | 198 | 3.071874 | TGCCATTAGAGTTGGTTCTGG | 57.928 | 47.619 | 0.00 | 0.00 | 36.57 | 3.86 |
198 | 199 | 6.757897 | TTAATGCCATTAGAGTTGGTTCTG | 57.242 | 37.500 | 0.00 | 0.00 | 36.57 | 3.02 |
199 | 200 | 7.961326 | AATTAATGCCATTAGAGTTGGTTCT | 57.039 | 32.000 | 0.00 | 0.00 | 36.57 | 3.01 |
200 | 201 | 9.120538 | TCTAATTAATGCCATTAGAGTTGGTTC | 57.879 | 33.333 | 0.00 | 0.00 | 38.01 | 3.62 |
201 | 202 | 9.646522 | ATCTAATTAATGCCATTAGAGTTGGTT | 57.353 | 29.630 | 8.06 | 0.00 | 43.36 | 3.67 |
202 | 203 | 9.289782 | GATCTAATTAATGCCATTAGAGTTGGT | 57.710 | 33.333 | 8.06 | 0.00 | 43.36 | 3.67 |
203 | 204 | 8.446273 | CGATCTAATTAATGCCATTAGAGTTGG | 58.554 | 37.037 | 8.06 | 0.00 | 43.36 | 3.77 |
204 | 205 | 8.993121 | ACGATCTAATTAATGCCATTAGAGTTG | 58.007 | 33.333 | 8.06 | 3.98 | 43.36 | 3.16 |
206 | 207 | 9.640963 | GTACGATCTAATTAATGCCATTAGAGT | 57.359 | 33.333 | 8.06 | 4.90 | 43.36 | 3.24 |
207 | 208 | 8.799091 | CGTACGATCTAATTAATGCCATTAGAG | 58.201 | 37.037 | 10.44 | 0.00 | 43.36 | 2.43 |
208 | 209 | 8.301720 | ACGTACGATCTAATTAATGCCATTAGA | 58.698 | 33.333 | 24.41 | 5.14 | 43.94 | 2.10 |
209 | 210 | 8.462143 | ACGTACGATCTAATTAATGCCATTAG | 57.538 | 34.615 | 24.41 | 0.00 | 36.08 | 1.73 |
210 | 211 | 9.345517 | GTACGTACGATCTAATTAATGCCATTA | 57.654 | 33.333 | 24.41 | 0.00 | 0.00 | 1.90 |
211 | 212 | 8.086522 | AGTACGTACGATCTAATTAATGCCATT | 58.913 | 33.333 | 24.41 | 0.00 | 0.00 | 3.16 |
212 | 213 | 7.600065 | AGTACGTACGATCTAATTAATGCCAT | 58.400 | 34.615 | 24.41 | 0.00 | 0.00 | 4.40 |
213 | 214 | 6.973843 | AGTACGTACGATCTAATTAATGCCA | 58.026 | 36.000 | 24.41 | 0.00 | 0.00 | 4.92 |
214 | 215 | 7.864307 | AAGTACGTACGATCTAATTAATGCC | 57.136 | 36.000 | 24.41 | 0.00 | 0.00 | 4.40 |
224 | 225 | 7.848051 | CGATTTACAGTAAAGTACGTACGATCT | 59.152 | 37.037 | 24.41 | 15.87 | 0.00 | 2.75 |
225 | 226 | 7.846107 | TCGATTTACAGTAAAGTACGTACGATC | 59.154 | 37.037 | 24.41 | 13.80 | 0.00 | 3.69 |
226 | 227 | 7.684670 | TCGATTTACAGTAAAGTACGTACGAT | 58.315 | 34.615 | 24.41 | 14.50 | 0.00 | 3.73 |
227 | 228 | 7.056002 | TCGATTTACAGTAAAGTACGTACGA | 57.944 | 36.000 | 24.41 | 6.97 | 0.00 | 3.43 |
228 | 229 | 6.955963 | ACTCGATTTACAGTAAAGTACGTACG | 59.044 | 38.462 | 19.49 | 15.01 | 0.00 | 3.67 |
229 | 230 | 7.746475 | ACACTCGATTTACAGTAAAGTACGTAC | 59.254 | 37.037 | 18.10 | 18.10 | 0.00 | 3.67 |
230 | 231 | 7.806690 | ACACTCGATTTACAGTAAAGTACGTA | 58.193 | 34.615 | 19.69 | 0.00 | 0.00 | 3.57 |
231 | 232 | 6.672147 | ACACTCGATTTACAGTAAAGTACGT | 58.328 | 36.000 | 19.69 | 0.00 | 0.00 | 3.57 |
232 | 233 | 7.558435 | AACACTCGATTTACAGTAAAGTACG | 57.442 | 36.000 | 11.41 | 14.68 | 0.00 | 3.67 |
286 | 287 | 1.745232 | ATCGCCATACCGAGCAAAAA | 58.255 | 45.000 | 0.00 | 0.00 | 40.97 | 1.94 |
287 | 288 | 1.745232 | AATCGCCATACCGAGCAAAA | 58.255 | 45.000 | 0.00 | 0.00 | 40.97 | 2.44 |
288 | 289 | 1.745232 | AAATCGCCATACCGAGCAAA | 58.255 | 45.000 | 0.00 | 0.00 | 40.97 | 3.68 |
289 | 290 | 2.206750 | GTAAATCGCCATACCGAGCAA | 58.793 | 47.619 | 0.00 | 0.00 | 40.97 | 3.91 |
290 | 291 | 1.539496 | GGTAAATCGCCATACCGAGCA | 60.539 | 52.381 | 0.00 | 0.00 | 40.97 | 4.26 |
291 | 292 | 1.145803 | GGTAAATCGCCATACCGAGC | 58.854 | 55.000 | 0.00 | 0.00 | 40.97 | 5.03 |
295 | 296 | 1.607251 | CCCTCGGTAAATCGCCATACC | 60.607 | 57.143 | 0.00 | 0.00 | 38.55 | 2.73 |
296 | 297 | 1.607251 | CCCCTCGGTAAATCGCCATAC | 60.607 | 57.143 | 0.00 | 0.00 | 0.00 | 2.39 |
297 | 298 | 0.682852 | CCCCTCGGTAAATCGCCATA | 59.317 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
298 | 299 | 1.450211 | CCCCTCGGTAAATCGCCAT | 59.550 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
299 | 300 | 2.904905 | CCCCTCGGTAAATCGCCA | 59.095 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
300 | 301 | 2.590859 | GCCCCTCGGTAAATCGCC | 60.591 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
301 | 302 | 2.965462 | CGCCCCTCGGTAAATCGC | 60.965 | 66.667 | 0.00 | 0.00 | 33.78 | 4.58 |
302 | 303 | 2.965462 | GCGCCCCTCGGTAAATCG | 60.965 | 66.667 | 0.00 | 0.00 | 38.94 | 3.34 |
303 | 304 | 2.965462 | CGCGCCCCTCGGTAAATC | 60.965 | 66.667 | 0.00 | 0.00 | 38.94 | 2.17 |
304 | 305 | 4.540735 | CCGCGCCCCTCGGTAAAT | 62.541 | 66.667 | 0.00 | 0.00 | 41.85 | 1.40 |
310 | 311 | 2.965462 | GTATTTCCGCGCCCCTCG | 60.965 | 66.667 | 0.00 | 0.00 | 42.12 | 4.63 |
311 | 312 | 2.965462 | CGTATTTCCGCGCCCCTC | 60.965 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
319 | 320 | 1.259507 | CATGGTTACCGCGTATTTCCG | 59.740 | 52.381 | 4.92 | 0.00 | 0.00 | 4.30 |
320 | 321 | 1.600485 | CCATGGTTACCGCGTATTTCC | 59.400 | 52.381 | 4.92 | 1.35 | 0.00 | 3.13 |
321 | 322 | 1.600485 | CCCATGGTTACCGCGTATTTC | 59.400 | 52.381 | 11.73 | 0.00 | 0.00 | 2.17 |
322 | 323 | 1.209990 | TCCCATGGTTACCGCGTATTT | 59.790 | 47.619 | 11.73 | 0.00 | 0.00 | 1.40 |
323 | 324 | 0.831966 | TCCCATGGTTACCGCGTATT | 59.168 | 50.000 | 11.73 | 0.00 | 0.00 | 1.89 |
324 | 325 | 0.831966 | TTCCCATGGTTACCGCGTAT | 59.168 | 50.000 | 11.73 | 0.00 | 0.00 | 3.06 |
325 | 326 | 0.612229 | TTTCCCATGGTTACCGCGTA | 59.388 | 50.000 | 11.73 | 0.00 | 0.00 | 4.42 |
326 | 327 | 0.034863 | ATTTCCCATGGTTACCGCGT | 60.035 | 50.000 | 11.73 | 0.00 | 0.00 | 6.01 |
327 | 328 | 0.661020 | GATTTCCCATGGTTACCGCG | 59.339 | 55.000 | 11.73 | 0.00 | 0.00 | 6.46 |
328 | 329 | 2.052782 | AGATTTCCCATGGTTACCGC | 57.947 | 50.000 | 11.73 | 0.00 | 0.00 | 5.68 |
329 | 330 | 3.616219 | TCAAGATTTCCCATGGTTACCG | 58.384 | 45.455 | 11.73 | 0.00 | 0.00 | 4.02 |
330 | 331 | 5.993748 | TTTCAAGATTTCCCATGGTTACC | 57.006 | 39.130 | 11.73 | 0.00 | 0.00 | 2.85 |
331 | 332 | 8.093927 | TGAAATTTCAAGATTTCCCATGGTTAC | 58.906 | 33.333 | 18.45 | 0.00 | 42.59 | 2.50 |
332 | 333 | 8.200024 | TGAAATTTCAAGATTTCCCATGGTTA | 57.800 | 30.769 | 18.45 | 0.00 | 42.59 | 2.85 |
333 | 334 | 7.077050 | TGAAATTTCAAGATTTCCCATGGTT | 57.923 | 32.000 | 18.45 | 0.00 | 42.59 | 3.67 |
334 | 335 | 6.684897 | TGAAATTTCAAGATTTCCCATGGT | 57.315 | 33.333 | 18.45 | 0.00 | 42.59 | 3.55 |
335 | 336 | 7.118680 | CAGTTGAAATTTCAAGATTTCCCATGG | 59.881 | 37.037 | 29.34 | 4.14 | 46.80 | 3.66 |
336 | 337 | 7.118680 | CCAGTTGAAATTTCAAGATTTCCCATG | 59.881 | 37.037 | 29.34 | 16.78 | 46.80 | 3.66 |
337 | 338 | 7.163441 | CCAGTTGAAATTTCAAGATTTCCCAT | 58.837 | 34.615 | 29.34 | 8.25 | 46.80 | 4.00 |
338 | 339 | 6.099557 | ACCAGTTGAAATTTCAAGATTTCCCA | 59.900 | 34.615 | 29.34 | 6.59 | 46.80 | 4.37 |
339 | 340 | 6.524734 | ACCAGTTGAAATTTCAAGATTTCCC | 58.475 | 36.000 | 29.34 | 17.49 | 46.80 | 3.97 |
340 | 341 | 8.978539 | GTTACCAGTTGAAATTTCAAGATTTCC | 58.021 | 33.333 | 29.34 | 18.10 | 46.80 | 3.13 |
341 | 342 | 8.978539 | GGTTACCAGTTGAAATTTCAAGATTTC | 58.021 | 33.333 | 29.34 | 18.72 | 46.80 | 2.17 |
342 | 343 | 8.482128 | TGGTTACCAGTTGAAATTTCAAGATTT | 58.518 | 29.630 | 29.34 | 17.98 | 46.80 | 2.17 |
343 | 344 | 8.017418 | TGGTTACCAGTTGAAATTTCAAGATT | 57.983 | 30.769 | 29.34 | 17.16 | 46.80 | 2.40 |
344 | 345 | 7.595819 | TGGTTACCAGTTGAAATTTCAAGAT | 57.404 | 32.000 | 29.34 | 19.71 | 46.80 | 2.40 |
345 | 346 | 7.411486 | TTGGTTACCAGTTGAAATTTCAAGA | 57.589 | 32.000 | 29.34 | 10.84 | 46.80 | 3.02 |
346 | 347 | 8.387354 | GTTTTGGTTACCAGTTGAAATTTCAAG | 58.613 | 33.333 | 29.34 | 21.04 | 46.80 | 3.02 |
347 | 348 | 7.334671 | GGTTTTGGTTACCAGTTGAAATTTCAA | 59.665 | 33.333 | 26.01 | 26.01 | 38.68 | 2.69 |
348 | 349 | 6.819146 | GGTTTTGGTTACCAGTTGAAATTTCA | 59.181 | 34.615 | 16.91 | 16.91 | 33.81 | 2.69 |
349 | 350 | 7.045416 | AGGTTTTGGTTACCAGTTGAAATTTC | 58.955 | 34.615 | 11.41 | 11.41 | 38.16 | 2.17 |
350 | 351 | 6.953101 | AGGTTTTGGTTACCAGTTGAAATTT | 58.047 | 32.000 | 3.65 | 0.00 | 38.16 | 1.82 |
351 | 352 | 6.553953 | AGGTTTTGGTTACCAGTTGAAATT | 57.446 | 33.333 | 3.65 | 0.00 | 38.16 | 1.82 |
352 | 353 | 6.345298 | CAAGGTTTTGGTTACCAGTTGAAAT | 58.655 | 36.000 | 3.65 | 0.00 | 38.16 | 2.17 |
353 | 354 | 5.725362 | CAAGGTTTTGGTTACCAGTTGAAA | 58.275 | 37.500 | 3.65 | 0.00 | 38.16 | 2.69 |
354 | 355 | 5.331876 | CAAGGTTTTGGTTACCAGTTGAA | 57.668 | 39.130 | 3.65 | 0.00 | 38.16 | 2.69 |
355 | 356 | 4.993029 | CAAGGTTTTGGTTACCAGTTGA | 57.007 | 40.909 | 3.65 | 0.00 | 38.16 | 3.18 |
367 | 368 | 2.621526 | GGTAGTCCACACCAAGGTTTTG | 59.378 | 50.000 | 0.00 | 0.00 | 36.01 | 2.44 |
368 | 369 | 2.242708 | TGGTAGTCCACACCAAGGTTTT | 59.757 | 45.455 | 0.00 | 0.00 | 43.08 | 2.43 |
369 | 370 | 1.847737 | TGGTAGTCCACACCAAGGTTT | 59.152 | 47.619 | 0.00 | 0.00 | 43.08 | 3.27 |
370 | 371 | 1.513858 | TGGTAGTCCACACCAAGGTT | 58.486 | 50.000 | 0.00 | 0.00 | 43.08 | 3.50 |
371 | 372 | 3.250816 | TGGTAGTCCACACCAAGGT | 57.749 | 52.632 | 0.00 | 0.00 | 43.08 | 3.50 |
421 | 422 | 1.464376 | CCGTGATAGTCCGGCATCCT | 61.464 | 60.000 | 0.00 | 0.00 | 37.43 | 3.24 |
465 | 466 | 7.067129 | CAGGCGTATTTAGATATCTAGCAGGTA | 59.933 | 40.741 | 17.75 | 0.65 | 0.00 | 3.08 |
466 | 467 | 5.952947 | AGGCGTATTTAGATATCTAGCAGGT | 59.047 | 40.000 | 17.75 | 6.51 | 0.00 | 4.00 |
471 | 472 | 6.093771 | ACGTCCAGGCGTATTTAGATATCTAG | 59.906 | 42.308 | 12.16 | 2.55 | 43.83 | 2.43 |
490 | 491 | 5.359009 | AGATTATTTCTTCCTCGTACGTCCA | 59.641 | 40.000 | 16.05 | 0.00 | 0.00 | 4.02 |
512 | 513 | 1.933021 | TTAAGGCCGTCTCTGGAAGA | 58.067 | 50.000 | 0.00 | 0.00 | 43.69 | 2.87 |
513 | 514 | 2.990066 | ATTAAGGCCGTCTCTGGAAG | 57.010 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
514 | 515 | 5.367945 | AATAATTAAGGCCGTCTCTGGAA | 57.632 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
515 | 516 | 5.367945 | AAATAATTAAGGCCGTCTCTGGA | 57.632 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
516 | 517 | 7.745620 | AATAAATAATTAAGGCCGTCTCTGG | 57.254 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
558 | 575 | 1.302511 | AATGCCGAAGCGTTCCTGT | 60.303 | 52.632 | 0.00 | 0.00 | 45.22 | 4.00 |
559 | 576 | 3.578456 | AATGCCGAAGCGTTCCTG | 58.422 | 55.556 | 0.00 | 0.00 | 45.22 | 3.86 |
570 | 587 | 5.903810 | ACTTCCTTTACTAGTAGAATGCCG | 58.096 | 41.667 | 3.59 | 0.00 | 0.00 | 5.69 |
588 | 605 | 5.473796 | TTCGTTTACACTGTCAAACTTCC | 57.526 | 39.130 | 10.90 | 0.00 | 33.43 | 3.46 |
596 | 613 | 3.739300 | TGCTAGCTTTCGTTTACACTGTC | 59.261 | 43.478 | 17.23 | 0.00 | 0.00 | 3.51 |
607 | 624 | 4.238514 | ACAACTAAGTCTGCTAGCTTTCG | 58.761 | 43.478 | 17.23 | 2.01 | 0.00 | 3.46 |
623 | 640 | 4.318192 | CGTACATTGCACAACGAACAACTA | 60.318 | 41.667 | 3.89 | 0.00 | 37.53 | 2.24 |
690 | 713 | 2.593436 | ACGGCCGTCCAAACAAGG | 60.593 | 61.111 | 28.70 | 0.00 | 0.00 | 3.61 |
795 | 833 | 4.986708 | TGGCTTGGAAACGGCCCC | 62.987 | 66.667 | 0.00 | 0.00 | 46.80 | 5.80 |
811 | 849 | 1.207089 | TCGGCAGGGAGTCATTAGTTG | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
826 | 864 | 3.604494 | CTGTACTGCGTCGTCGGCA | 62.604 | 63.158 | 3.90 | 0.00 | 37.56 | 5.69 |
883 | 925 | 4.435970 | TGGGCTCGCGAGGGTCTA | 62.436 | 66.667 | 35.10 | 10.27 | 35.63 | 2.59 |
985 | 1059 | 2.270205 | CATGGCAAGGCGAGGAGT | 59.730 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
1043 | 1117 | 2.101415 | CTCACCTCGGCATACATTCTGA | 59.899 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1081 | 1155 | 0.399949 | ACCCAGAACCACAGGACTGA | 60.400 | 55.000 | 6.29 | 0.00 | 34.72 | 3.41 |
1087 | 1161 | 0.389025 | GCCAAAACCCAGAACCACAG | 59.611 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1166 | 1252 | 1.300963 | CTCCACCACACCCTGGATG | 59.699 | 63.158 | 0.00 | 0.00 | 43.95 | 3.51 |
1230 | 1318 | 0.677731 | TTGATCAAGAGGCGGGCAAG | 60.678 | 55.000 | 3.38 | 0.00 | 0.00 | 4.01 |
1232 | 1320 | 1.377202 | GTTGATCAAGAGGCGGGCA | 60.377 | 57.895 | 8.80 | 0.00 | 0.00 | 5.36 |
1244 | 1332 | 2.846039 | TCTCGTAGGCTTCGTTGATC | 57.154 | 50.000 | 13.25 | 0.00 | 0.00 | 2.92 |
1491 | 1590 | 7.201635 | GGGCCAACAAGCATTATAATGAAAAAG | 60.202 | 37.037 | 26.22 | 13.58 | 38.70 | 2.27 |
1545 | 1662 | 1.924524 | CTAATTACGGCCACACGACAG | 59.075 | 52.381 | 2.24 | 0.00 | 37.61 | 3.51 |
1547 | 1664 | 2.282701 | TCTAATTACGGCCACACGAC | 57.717 | 50.000 | 2.24 | 0.00 | 37.61 | 4.34 |
1548 | 1665 | 2.492881 | TCTTCTAATTACGGCCACACGA | 59.507 | 45.455 | 2.24 | 0.00 | 37.61 | 4.35 |
1653 | 1859 | 5.994668 | GGGGATGAACAAGATAGAAGATCAC | 59.005 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1730 | 1986 | 2.032528 | CACACCCTGTGCCGACAT | 59.967 | 61.111 | 0.00 | 0.00 | 41.89 | 3.06 |
1783 | 2041 | 0.108585 | ATATGACGGCCGCCAGAAAT | 59.891 | 50.000 | 28.58 | 13.00 | 0.00 | 2.17 |
1787 | 2045 | 1.738099 | GCTATATGACGGCCGCCAG | 60.738 | 63.158 | 28.58 | 9.88 | 0.00 | 4.85 |
1799 | 2057 | 7.454380 | ACTCAGCTCTTCTTTCTATGGCTATAT | 59.546 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
1838 | 2096 | 5.819991 | ACCAACAATTCTGGTACATGAGAT | 58.180 | 37.500 | 0.00 | 0.00 | 45.58 | 2.75 |
1839 | 2097 | 5.241403 | ACCAACAATTCTGGTACATGAGA | 57.759 | 39.130 | 0.00 | 0.00 | 45.58 | 3.27 |
2057 | 2363 | 1.366366 | GACGTACACACCCTGCTGT | 59.634 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
2075 | 2388 | 2.721274 | TTCAAATGACGCCCATGTTG | 57.279 | 45.000 | 0.00 | 0.00 | 35.24 | 3.33 |
2076 | 2389 | 2.562298 | ACATTCAAATGACGCCCATGTT | 59.438 | 40.909 | 9.62 | 0.00 | 39.67 | 2.71 |
2077 | 2390 | 2.164219 | GACATTCAAATGACGCCCATGT | 59.836 | 45.455 | 9.62 | 0.00 | 39.67 | 3.21 |
2145 | 2458 | 5.351948 | TGTCATGAATACCGAGAATTCCA | 57.648 | 39.130 | 0.00 | 0.00 | 33.28 | 3.53 |
2230 | 2550 | 9.997482 | GAAAAACACCATTGTCGTTATATATGT | 57.003 | 29.630 | 0.00 | 0.00 | 33.55 | 2.29 |
2233 | 2553 | 8.670135 | CCAGAAAAACACCATTGTCGTTATATA | 58.330 | 33.333 | 0.00 | 0.00 | 33.55 | 0.86 |
2338 | 2667 | 9.955208 | CATGTTGATACACATAAGCATATTTGT | 57.045 | 29.630 | 6.07 | 6.07 | 35.51 | 2.83 |
2386 | 2715 | 8.039603 | ACACACGCTGATCAGAAAATTAATTA | 57.960 | 30.769 | 27.04 | 0.00 | 0.00 | 1.40 |
2387 | 2716 | 6.913170 | ACACACGCTGATCAGAAAATTAATT | 58.087 | 32.000 | 27.04 | 0.00 | 0.00 | 1.40 |
2388 | 2717 | 6.500684 | ACACACGCTGATCAGAAAATTAAT | 57.499 | 33.333 | 27.04 | 1.14 | 0.00 | 1.40 |
2389 | 2718 | 5.940192 | ACACACGCTGATCAGAAAATTAA | 57.060 | 34.783 | 27.04 | 0.00 | 0.00 | 1.40 |
2479 | 2809 | 6.825610 | TCTGACCCTTGTTTGCATTTTATTT | 58.174 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2668 | 3003 | 6.291377 | ACCGAGTAATATCAACATGATTGCT | 58.709 | 36.000 | 0.00 | 0.00 | 38.26 | 3.91 |
2716 | 3054 | 9.807649 | GCCAACAAATTACAAGAGAATCATAAT | 57.192 | 29.630 | 0.00 | 0.00 | 37.82 | 1.28 |
2759 | 3097 | 8.250332 | TGGCCATATTGAAAATTAGTTCTGTTC | 58.750 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2764 | 3102 | 7.547227 | ACACTGGCCATATTGAAAATTAGTTC | 58.453 | 34.615 | 5.51 | 0.00 | 0.00 | 3.01 |
2771 | 3109 | 5.774690 | AGAAAGACACTGGCCATATTGAAAA | 59.225 | 36.000 | 5.51 | 0.00 | 0.00 | 2.29 |
2852 | 3198 | 7.819644 | TGGAAATAGATCACACAGTCAAATTG | 58.180 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
2871 | 3218 | 5.484998 | ACAAGGCACCTGAAATAATGGAAAT | 59.515 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2875 | 3222 | 3.511146 | ACACAAGGCACCTGAAATAATGG | 59.489 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3144 | 3495 | 9.605955 | TGACAAAATTACGACATAAACATTCAG | 57.394 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
3337 | 3693 | 9.045745 | ACATATGTACCTTCCCAAAAATGATTT | 57.954 | 29.630 | 6.56 | 0.00 | 0.00 | 2.17 |
3571 | 3935 | 1.298859 | ATGAGACCAAAGTTCCGCGC | 61.299 | 55.000 | 0.00 | 0.00 | 0.00 | 6.86 |
3572 | 3936 | 2.004583 | TATGAGACCAAAGTTCCGCG | 57.995 | 50.000 | 0.00 | 0.00 | 0.00 | 6.46 |
3601 | 3965 | 3.105937 | GACAAAGGACAACAAGTTTCGC | 58.894 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
3623 | 3987 | 4.966850 | ATAGACTTCACGAACAAACACG | 57.033 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
3624 | 3988 | 8.684973 | AGTATATAGACTTCACGAACAAACAC | 57.315 | 34.615 | 0.00 | 0.00 | 0.00 | 3.32 |
3765 | 4133 | 2.210116 | CTAGCCAACAACACGACTTGT | 58.790 | 47.619 | 0.00 | 0.00 | 41.74 | 3.16 |
3839 | 4207 | 4.588951 | AGTCACACTGAAGATTACAGACCA | 59.411 | 41.667 | 0.00 | 0.00 | 38.55 | 4.02 |
3856 | 4224 | 6.505044 | TCGTACTCTTATAAGCAAGTCACA | 57.495 | 37.500 | 7.67 | 0.00 | 0.00 | 3.58 |
3907 | 4275 | 3.802948 | ACTATCACCTCTACTTTGCCG | 57.197 | 47.619 | 0.00 | 0.00 | 0.00 | 5.69 |
3933 | 4301 | 4.429522 | ATGCCTGCATGTCGCCCA | 62.430 | 61.111 | 3.36 | 0.00 | 41.33 | 5.36 |
3951 | 4319 | 1.741770 | ACGGATTGCCAGCTTCGTC | 60.742 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
3959 | 4327 | 2.282816 | CCAACCCACGGATTGCCA | 60.283 | 61.111 | 0.00 | 0.00 | 0.00 | 4.92 |
3963 | 4331 | 0.757188 | TTTGTGCCAACCCACGGATT | 60.757 | 50.000 | 0.00 | 0.00 | 38.55 | 3.01 |
4301 | 4669 | 6.307558 | TGATGCTTGCAATGTAAATTGTAACG | 59.692 | 34.615 | 5.14 | 4.06 | 33.68 | 3.18 |
4309 | 4677 | 7.600960 | TCTTATTGTGATGCTTGCAATGTAAA | 58.399 | 30.769 | 0.00 | 0.00 | 34.97 | 2.01 |
4340 | 4708 | 7.644157 | GGAAATCACACTTTGTACTTTCTTCAC | 59.356 | 37.037 | 0.00 | 0.00 | 33.79 | 3.18 |
4379 | 4747 | 4.566004 | TGCACATACTCAGTGGTTAGTTC | 58.434 | 43.478 | 0.00 | 0.00 | 37.46 | 3.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.