Multiple sequence alignment - TraesCS4A01G301500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G301500 chr4A 100.000 2549 0 0 1 2549 598585248 598582700 0.000000e+00 4708
1 TraesCS4A01G301500 chr4A 95.404 1632 52 11 937 2549 610781458 610779831 0.000000e+00 2577
2 TraesCS4A01G301500 chr4A 94.740 1502 53 9 635 2116 738255720 738257215 0.000000e+00 2313
3 TraesCS4A01G301500 chr3B 95.236 1931 70 14 635 2549 792939454 792941378 0.000000e+00 3037
4 TraesCS4A01G301500 chr3B 93.032 1966 74 29 635 2549 474243137 474241184 0.000000e+00 2813
5 TraesCS4A01G301500 chr3B 92.817 1977 69 27 636 2549 673607382 673605416 0.000000e+00 2796
6 TraesCS4A01G301500 chr3B 92.770 1964 71 32 635 2549 703251205 703253146 0.000000e+00 2774
7 TraesCS4A01G301500 chr3B 94.075 1654 48 19 937 2549 61128330 61129974 0.000000e+00 2466
8 TraesCS4A01G301500 chr3B 98.780 82 1 0 568 649 53531160 53531079 2.040000e-31 147
9 TraesCS4A01G301500 chr3B 94.565 92 3 2 559 649 722341924 722341834 9.510000e-30 141
10 TraesCS4A01G301500 chr3B 90.654 107 8 2 544 649 723101503 723101608 9.510000e-30 141
11 TraesCS4A01G301500 chr6B 94.990 1936 69 16 635 2549 527993541 527991613 0.000000e+00 3013
12 TraesCS4A01G301500 chr6B 94.476 1937 69 15 635 2549 658367352 658365432 0.000000e+00 2950
13 TraesCS4A01G301500 chr1B 93.998 1966 61 21 635 2549 581717525 581715566 0.000000e+00 2924
14 TraesCS4A01G301500 chr1B 92.672 1965 75 20 635 2549 663786531 663788476 0.000000e+00 2767
15 TraesCS4A01G301500 chr1B 94.769 1491 68 4 635 2117 582666153 582664665 0.000000e+00 2313
16 TraesCS4A01G301500 chr1B 92.231 399 16 9 2162 2549 427481735 427481341 3.710000e-153 551
17 TraesCS4A01G301500 chr1B 84.774 486 60 12 91 569 282313593 282313115 2.290000e-130 475
18 TraesCS4A01G301500 chr1B 83.925 479 65 11 96 569 672800288 672800759 5.000000e-122 448
19 TraesCS4A01G301500 chr5B 94.157 1934 78 20 635 2549 76431863 76429946 0.000000e+00 2913
20 TraesCS4A01G301500 chr5B 93.130 1965 77 17 635 2549 497276201 497278157 0.000000e+00 2828
21 TraesCS4A01G301500 chr5B 92.970 1963 69 19 637 2549 446193216 446191273 0.000000e+00 2796
22 TraesCS4A01G301500 chr5B 92.726 1966 73 18 635 2549 269389509 269391455 0.000000e+00 2774
23 TraesCS4A01G301500 chr5B 83.778 487 65 10 91 569 272744436 272744916 1.390000e-122 449
24 TraesCS4A01G301500 chr5B 83.750 480 71 5 92 569 415130412 415130886 5.000000e-122 448
25 TraesCS4A01G301500 chr5B 83.505 485 71 9 91 569 480026784 480027265 6.470000e-121 444
26 TraesCS4A01G301500 chr4B 93.119 1962 81 15 635 2549 502212906 502210952 0.000000e+00 2826
27 TraesCS4A01G301500 chr4B 92.988 1968 73 22 635 2549 372353081 372351126 0.000000e+00 2809
28 TraesCS4A01G301500 chr4B 92.077 1969 96 17 635 2549 653184977 653186939 0.000000e+00 2717
29 TraesCS4A01G301500 chr4B 94.788 1631 50 16 938 2549 17791482 17789868 0.000000e+00 2508
30 TraesCS4A01G301500 chr4B 94.426 1489 71 6 635 2115 534922915 534921431 0.000000e+00 2279
31 TraesCS4A01G301500 chr4B 93.404 470 21 4 1654 2116 642722346 642721880 0.000000e+00 688
32 TraesCS4A01G301500 chr4B 94.444 90 5 0 560 649 18572138 18572227 3.420000e-29 139
33 TraesCS4A01G301500 chr4B 92.784 97 4 2 553 649 653205061 653204968 1.230000e-28 137
34 TraesCS4A01G301500 chr7B 92.875 1965 79 30 635 2549 12494643 12492690 0.000000e+00 2796
35 TraesCS4A01G301500 chr7B 93.624 1490 76 7 635 2116 54520663 54519185 0.000000e+00 2207
36 TraesCS4A01G301500 chr7B 92.784 97 7 0 553 649 734153108 734153012 9.510000e-30 141
37 TraesCS4A01G301500 chr2D 96.309 1490 44 5 635 2116 610930693 610932179 0.000000e+00 2436
38 TraesCS4A01G301500 chr2D 90.249 482 42 4 91 569 580401645 580402124 2.150000e-175 625
39 TraesCS4A01G301500 chr1D 92.365 406 20 5 1720 2116 17039409 17039006 3.680000e-158 568
40 TraesCS4A01G301500 chr1D 91.878 394 20 5 1720 2102 25465633 25466025 8.020000e-150 540
41 TraesCS4A01G301500 chr1D 84.440 482 67 8 92 569 495132389 495132866 3.840000e-128 468
42 TraesCS4A01G301500 chr1D 83.437 483 67 11 91 569 465934142 465933669 1.080000e-118 436
43 TraesCS4A01G301500 chr6D 92.118 406 18 7 1720 2117 429625912 429626311 6.160000e-156 560
44 TraesCS4A01G301500 chr6D 92.632 95 6 1 555 649 28981297 28981204 4.420000e-28 135
45 TraesCS4A01G301500 chr7A 85.950 484 59 8 91 569 729024089 729023610 2.260000e-140 508
46 TraesCS4A01G301500 chrUn 89.610 385 26 7 1720 2096 355015178 355015556 6.380000e-131 477
47 TraesCS4A01G301500 chrUn 86.990 392 25 6 1720 2102 302375190 302375564 3.920000e-113 418
48 TraesCS4A01G301500 chr3A 91.935 124 10 0 569 692 683221174 683221297 9.370000e-40 174
49 TraesCS4A01G301500 chr4D 97.753 89 2 0 1 89 5126963 5127051 1.220000e-33 154
50 TraesCS4A01G301500 chr4D 96.923 65 2 0 25 89 5141127 5141191 2.680000e-20 110
51 TraesCS4A01G301500 chr1A 94.505 91 4 1 559 649 22791519 22791608 3.420000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G301500 chr4A 598582700 598585248 2548 True 4708 4708 100.000 1 2549 1 chr4A.!!$R1 2548
1 TraesCS4A01G301500 chr4A 610779831 610781458 1627 True 2577 2577 95.404 937 2549 1 chr4A.!!$R2 1612
2 TraesCS4A01G301500 chr4A 738255720 738257215 1495 False 2313 2313 94.740 635 2116 1 chr4A.!!$F1 1481
3 TraesCS4A01G301500 chr3B 792939454 792941378 1924 False 3037 3037 95.236 635 2549 1 chr3B.!!$F4 1914
4 TraesCS4A01G301500 chr3B 474241184 474243137 1953 True 2813 2813 93.032 635 2549 1 chr3B.!!$R2 1914
5 TraesCS4A01G301500 chr3B 673605416 673607382 1966 True 2796 2796 92.817 636 2549 1 chr3B.!!$R3 1913
6 TraesCS4A01G301500 chr3B 703251205 703253146 1941 False 2774 2774 92.770 635 2549 1 chr3B.!!$F2 1914
7 TraesCS4A01G301500 chr3B 61128330 61129974 1644 False 2466 2466 94.075 937 2549 1 chr3B.!!$F1 1612
8 TraesCS4A01G301500 chr6B 527991613 527993541 1928 True 3013 3013 94.990 635 2549 1 chr6B.!!$R1 1914
9 TraesCS4A01G301500 chr6B 658365432 658367352 1920 True 2950 2950 94.476 635 2549 1 chr6B.!!$R2 1914
10 TraesCS4A01G301500 chr1B 581715566 581717525 1959 True 2924 2924 93.998 635 2549 1 chr1B.!!$R3 1914
11 TraesCS4A01G301500 chr1B 663786531 663788476 1945 False 2767 2767 92.672 635 2549 1 chr1B.!!$F1 1914
12 TraesCS4A01G301500 chr1B 582664665 582666153 1488 True 2313 2313 94.769 635 2117 1 chr1B.!!$R4 1482
13 TraesCS4A01G301500 chr5B 76429946 76431863 1917 True 2913 2913 94.157 635 2549 1 chr5B.!!$R1 1914
14 TraesCS4A01G301500 chr5B 497276201 497278157 1956 False 2828 2828 93.130 635 2549 1 chr5B.!!$F5 1914
15 TraesCS4A01G301500 chr5B 446191273 446193216 1943 True 2796 2796 92.970 637 2549 1 chr5B.!!$R2 1912
16 TraesCS4A01G301500 chr5B 269389509 269391455 1946 False 2774 2774 92.726 635 2549 1 chr5B.!!$F1 1914
17 TraesCS4A01G301500 chr4B 502210952 502212906 1954 True 2826 2826 93.119 635 2549 1 chr4B.!!$R3 1914
18 TraesCS4A01G301500 chr4B 372351126 372353081 1955 True 2809 2809 92.988 635 2549 1 chr4B.!!$R2 1914
19 TraesCS4A01G301500 chr4B 653184977 653186939 1962 False 2717 2717 92.077 635 2549 1 chr4B.!!$F2 1914
20 TraesCS4A01G301500 chr4B 17789868 17791482 1614 True 2508 2508 94.788 938 2549 1 chr4B.!!$R1 1611
21 TraesCS4A01G301500 chr4B 534921431 534922915 1484 True 2279 2279 94.426 635 2115 1 chr4B.!!$R4 1480
22 TraesCS4A01G301500 chr7B 12492690 12494643 1953 True 2796 2796 92.875 635 2549 1 chr7B.!!$R1 1914
23 TraesCS4A01G301500 chr7B 54519185 54520663 1478 True 2207 2207 93.624 635 2116 1 chr7B.!!$R2 1481
24 TraesCS4A01G301500 chr2D 610930693 610932179 1486 False 2436 2436 96.309 635 2116 1 chr2D.!!$F2 1481

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
227 228 0.036388 CCTTTGACTTAGGCTCCGCA 60.036 55.0 0.0 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2172 2704 0.030101 AAACACCACAAATCCACGCG 59.97 50.0 3.53 3.53 0.0 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.246719 CCAGAGCTGGTAATACAGGC 57.753 55.000 8.38 0.00 45.53 4.85
34 35 1.539065 CCAGAGCTGGTAATACAGGCG 60.539 57.143 8.38 0.00 45.53 5.52
35 36 0.753262 AGAGCTGGTAATACAGGCGG 59.247 55.000 0.00 0.00 38.90 6.13
36 37 0.249911 GAGCTGGTAATACAGGCGGG 60.250 60.000 0.00 0.00 38.90 6.13
37 38 1.227853 GCTGGTAATACAGGCGGGG 60.228 63.158 0.00 0.00 38.90 5.73
38 39 1.227853 CTGGTAATACAGGCGGGGC 60.228 63.158 0.00 0.00 34.84 5.80
39 40 1.978455 CTGGTAATACAGGCGGGGCA 61.978 60.000 0.00 0.00 34.84 5.36
40 41 1.525306 GGTAATACAGGCGGGGCAC 60.525 63.158 0.00 0.00 0.00 5.01
42 43 3.096633 TAATACAGGCGGGGCACGG 62.097 63.158 12.74 0.00 44.51 4.94
50 51 4.418328 CGGGGCACGGATCCCAAA 62.418 66.667 6.06 0.00 45.73 3.28
51 52 2.036572 GGGGCACGGATCCCAAAA 59.963 61.111 6.06 0.00 45.73 2.44
52 53 2.052104 GGGGCACGGATCCCAAAAG 61.052 63.158 6.06 0.00 45.73 2.27
53 54 2.710902 GGGCACGGATCCCAAAAGC 61.711 63.158 6.06 3.13 43.37 3.51
54 55 1.976474 GGCACGGATCCCAAAAGCA 60.976 57.895 6.06 0.00 0.00 3.91
55 56 1.322538 GGCACGGATCCCAAAAGCAT 61.323 55.000 6.06 0.00 0.00 3.79
56 57 0.532115 GCACGGATCCCAAAAGCATT 59.468 50.000 6.06 0.00 0.00 3.56
57 58 1.469767 GCACGGATCCCAAAAGCATTC 60.470 52.381 6.06 0.00 0.00 2.67
58 59 1.818060 CACGGATCCCAAAAGCATTCA 59.182 47.619 6.06 0.00 0.00 2.57
59 60 2.230992 CACGGATCCCAAAAGCATTCAA 59.769 45.455 6.06 0.00 0.00 2.69
60 61 2.896685 ACGGATCCCAAAAGCATTCAAA 59.103 40.909 6.06 0.00 0.00 2.69
61 62 3.253230 CGGATCCCAAAAGCATTCAAAC 58.747 45.455 6.06 0.00 0.00 2.93
62 63 3.056607 CGGATCCCAAAAGCATTCAAACT 60.057 43.478 6.06 0.00 0.00 2.66
63 64 4.561326 CGGATCCCAAAAGCATTCAAACTT 60.561 41.667 6.06 0.00 0.00 2.66
64 65 5.336372 CGGATCCCAAAAGCATTCAAACTTA 60.336 40.000 6.06 0.00 0.00 2.24
65 66 6.627953 CGGATCCCAAAAGCATTCAAACTTAT 60.628 38.462 6.06 0.00 0.00 1.73
66 67 7.105588 GGATCCCAAAAGCATTCAAACTTATT 58.894 34.615 0.00 0.00 0.00 1.40
67 68 7.607607 GGATCCCAAAAGCATTCAAACTTATTT 59.392 33.333 0.00 0.00 0.00 1.40
68 69 7.727331 TCCCAAAAGCATTCAAACTTATTTG 57.273 32.000 0.00 0.00 45.67 2.32
69 70 6.709846 TCCCAAAAGCATTCAAACTTATTTGG 59.290 34.615 6.91 6.91 44.61 3.28
70 71 6.486320 CCCAAAAGCATTCAAACTTATTTGGT 59.514 34.615 11.63 0.00 44.61 3.67
71 72 7.307930 CCCAAAAGCATTCAAACTTATTTGGTC 60.308 37.037 11.63 0.00 44.61 4.02
72 73 7.226325 CCAAAAGCATTCAAACTTATTTGGTCA 59.774 33.333 0.00 0.00 44.61 4.02
73 74 8.610896 CAAAAGCATTCAAACTTATTTGGTCAA 58.389 29.630 0.25 0.00 44.61 3.18
74 75 7.951530 AAGCATTCAAACTTATTTGGTCAAG 57.048 32.000 0.25 0.00 44.61 3.02
75 76 7.288810 AGCATTCAAACTTATTTGGTCAAGA 57.711 32.000 0.25 0.00 44.61 3.02
76 77 7.899973 AGCATTCAAACTTATTTGGTCAAGAT 58.100 30.769 0.25 0.00 44.61 2.40
77 78 7.816031 AGCATTCAAACTTATTTGGTCAAGATG 59.184 33.333 0.25 0.00 44.61 2.90
78 79 7.599998 GCATTCAAACTTATTTGGTCAAGATGT 59.400 33.333 0.25 0.00 44.61 3.06
79 80 8.918658 CATTCAAACTTATTTGGTCAAGATGTG 58.081 33.333 0.25 0.00 44.61 3.21
80 81 6.446318 TCAAACTTATTTGGTCAAGATGTGC 58.554 36.000 0.25 0.00 44.61 4.57
81 82 6.040278 TCAAACTTATTTGGTCAAGATGTGCA 59.960 34.615 0.25 0.00 44.61 4.57
82 83 6.403866 AACTTATTTGGTCAAGATGTGCAA 57.596 33.333 0.00 0.00 0.00 4.08
83 84 6.403866 ACTTATTTGGTCAAGATGTGCAAA 57.596 33.333 0.00 0.00 0.00 3.68
84 85 6.996509 ACTTATTTGGTCAAGATGTGCAAAT 58.003 32.000 0.00 0.00 35.42 2.32
85 86 7.444299 ACTTATTTGGTCAAGATGTGCAAATT 58.556 30.769 0.00 0.00 34.07 1.82
86 87 7.385752 ACTTATTTGGTCAAGATGTGCAAATTG 59.614 33.333 0.00 0.00 34.07 2.32
87 88 4.933505 TTGGTCAAGATGTGCAAATTGA 57.066 36.364 0.00 0.00 0.00 2.57
88 89 4.508461 TGGTCAAGATGTGCAAATTGAG 57.492 40.909 0.00 0.00 32.64 3.02
89 90 3.890756 TGGTCAAGATGTGCAAATTGAGT 59.109 39.130 0.00 0.00 32.64 3.41
90 91 5.069318 TGGTCAAGATGTGCAAATTGAGTA 58.931 37.500 0.00 0.00 32.64 2.59
91 92 5.048782 TGGTCAAGATGTGCAAATTGAGTAC 60.049 40.000 0.00 0.00 32.64 2.73
92 93 5.048782 GGTCAAGATGTGCAAATTGAGTACA 60.049 40.000 0.00 4.92 32.64 2.90
93 94 6.349611 GGTCAAGATGTGCAAATTGAGTACAT 60.350 38.462 12.50 12.50 32.64 2.29
94 95 7.086376 GTCAAGATGTGCAAATTGAGTACATT 58.914 34.615 13.44 1.33 32.64 2.71
95 96 7.596248 GTCAAGATGTGCAAATTGAGTACATTT 59.404 33.333 13.44 7.57 32.64 2.32
96 97 8.143193 TCAAGATGTGCAAATTGAGTACATTTT 58.857 29.630 13.44 11.76 32.58 1.82
97 98 8.767085 CAAGATGTGCAAATTGAGTACATTTTT 58.233 29.630 13.44 9.83 32.58 1.94
98 99 8.301730 AGATGTGCAAATTGAGTACATTTTTG 57.698 30.769 13.44 1.32 35.02 2.44
99 100 8.143193 AGATGTGCAAATTGAGTACATTTTTGA 58.857 29.630 13.44 0.00 34.42 2.69
100 101 7.462109 TGTGCAAATTGAGTACATTTTTGAC 57.538 32.000 0.00 8.87 34.42 3.18
101 102 6.478344 TGTGCAAATTGAGTACATTTTTGACC 59.522 34.615 0.00 4.90 34.42 4.02
102 103 6.701400 GTGCAAATTGAGTACATTTTTGACCT 59.299 34.615 0.00 0.00 34.42 3.85
103 104 6.700960 TGCAAATTGAGTACATTTTTGACCTG 59.299 34.615 0.00 0.00 34.42 4.00
104 105 6.701400 GCAAATTGAGTACATTTTTGACCTGT 59.299 34.615 0.00 0.00 34.42 4.00
105 106 7.306749 GCAAATTGAGTACATTTTTGACCTGTG 60.307 37.037 0.00 0.00 34.42 3.66
106 107 5.766150 TTGAGTACATTTTTGACCTGTGG 57.234 39.130 0.00 0.00 0.00 4.17
107 108 5.042463 TGAGTACATTTTTGACCTGTGGA 57.958 39.130 0.00 0.00 0.00 4.02
108 109 4.819630 TGAGTACATTTTTGACCTGTGGAC 59.180 41.667 0.00 0.00 0.00 4.02
109 110 3.813166 AGTACATTTTTGACCTGTGGACG 59.187 43.478 0.00 0.00 0.00 4.79
110 111 2.925724 ACATTTTTGACCTGTGGACGA 58.074 42.857 0.00 0.00 0.00 4.20
111 112 3.283751 ACATTTTTGACCTGTGGACGAA 58.716 40.909 0.00 0.00 0.00 3.85
112 113 3.697045 ACATTTTTGACCTGTGGACGAAA 59.303 39.130 0.00 0.00 31.16 3.46
113 114 4.340950 ACATTTTTGACCTGTGGACGAAAT 59.659 37.500 0.00 0.63 32.65 2.17
114 115 4.561735 TTTTTGACCTGTGGACGAAATC 57.438 40.909 0.00 0.00 32.65 2.17
115 116 2.920724 TTGACCTGTGGACGAAATCA 57.079 45.000 0.00 0.00 0.00 2.57
116 117 2.920724 TGACCTGTGGACGAAATCAA 57.079 45.000 0.00 0.00 0.00 2.57
117 118 3.201353 TGACCTGTGGACGAAATCAAA 57.799 42.857 0.00 0.00 0.00 2.69
118 119 3.750371 TGACCTGTGGACGAAATCAAAT 58.250 40.909 0.00 0.00 0.00 2.32
119 120 3.751175 TGACCTGTGGACGAAATCAAATC 59.249 43.478 0.00 0.00 0.00 2.17
120 121 3.750371 ACCTGTGGACGAAATCAAATCA 58.250 40.909 0.00 0.00 0.00 2.57
121 122 3.502211 ACCTGTGGACGAAATCAAATCAC 59.498 43.478 0.00 0.00 0.00 3.06
122 123 3.424829 CCTGTGGACGAAATCAAATCACG 60.425 47.826 0.00 0.00 0.00 4.35
123 124 3.394719 TGTGGACGAAATCAAATCACGA 58.605 40.909 0.00 0.00 0.00 4.35
124 125 4.000325 TGTGGACGAAATCAAATCACGAT 59.000 39.130 0.00 0.00 0.00 3.73
125 126 4.454161 TGTGGACGAAATCAAATCACGATT 59.546 37.500 0.00 0.00 34.56 3.34
126 127 5.049060 TGTGGACGAAATCAAATCACGATTT 60.049 36.000 0.00 0.00 43.90 2.17
140 141 8.472683 AAATCACGATTTGAACTGTTTTTGAA 57.527 26.923 4.24 0.00 39.36 2.69
141 142 8.472683 AATCACGATTTGAACTGTTTTTGAAA 57.527 26.923 0.00 0.00 37.92 2.69
142 143 7.875316 TCACGATTTGAACTGTTTTTGAAAA 57.125 28.000 0.00 0.00 0.00 2.29
143 144 8.299262 TCACGATTTGAACTGTTTTTGAAAAA 57.701 26.923 0.00 0.00 0.00 1.94
167 168 8.592105 AAAAATCACATACTGACCATTTTGTG 57.408 30.769 5.17 5.17 36.64 3.33
168 169 6.899393 AATCACATACTGACCATTTTGTGT 57.101 33.333 9.42 0.00 36.66 3.72
169 170 5.687770 TCACATACTGACCATTTTGTGTG 57.312 39.130 9.42 0.00 36.66 3.82
170 171 4.518590 TCACATACTGACCATTTTGTGTGG 59.481 41.667 9.42 0.00 42.55 4.17
171 172 3.255642 ACATACTGACCATTTTGTGTGGC 59.744 43.478 0.00 0.00 40.49 5.01
172 173 0.667993 ACTGACCATTTTGTGTGGCG 59.332 50.000 0.00 0.00 40.49 5.69
173 174 0.667993 CTGACCATTTTGTGTGGCGT 59.332 50.000 0.00 0.00 40.49 5.68
174 175 0.665835 TGACCATTTTGTGTGGCGTC 59.334 50.000 0.00 0.00 40.49 5.19
175 176 0.039527 GACCATTTTGTGTGGCGTCC 60.040 55.000 0.00 0.00 40.49 4.79
176 177 1.081509 CCATTTTGTGTGGCGTCCG 60.082 57.895 0.00 0.00 0.00 4.79
177 178 1.511318 CCATTTTGTGTGGCGTCCGA 61.511 55.000 0.00 0.00 0.00 4.55
178 179 0.385473 CATTTTGTGTGGCGTCCGAC 60.385 55.000 0.00 0.00 0.00 4.79
179 180 0.816018 ATTTTGTGTGGCGTCCGACA 60.816 50.000 0.00 0.00 0.00 4.35
180 181 1.433053 TTTTGTGTGGCGTCCGACAG 61.433 55.000 0.00 0.00 31.40 3.51
181 182 4.961511 TGTGTGGCGTCCGACAGC 62.962 66.667 0.00 3.32 31.40 4.40
197 198 4.687215 GCCAGACGCTGCACTCCA 62.687 66.667 0.00 0.00 0.00 3.86
198 199 2.740055 CCAGACGCTGCACTCCAC 60.740 66.667 0.00 0.00 0.00 4.02
199 200 2.341543 CAGACGCTGCACTCCACT 59.658 61.111 0.00 0.00 0.00 4.00
200 201 1.586541 CAGACGCTGCACTCCACTA 59.413 57.895 0.00 0.00 0.00 2.74
201 202 0.174389 CAGACGCTGCACTCCACTAT 59.826 55.000 0.00 0.00 0.00 2.12
202 203 0.174389 AGACGCTGCACTCCACTATG 59.826 55.000 0.00 0.00 0.00 2.23
203 204 1.424493 GACGCTGCACTCCACTATGC 61.424 60.000 0.00 0.00 42.40 3.14
208 209 1.425428 GCACTCCACTATGCAACGC 59.575 57.895 0.00 0.00 41.65 4.84
209 210 1.982073 GCACTCCACTATGCAACGCC 61.982 60.000 0.00 0.00 41.65 5.68
210 211 0.391661 CACTCCACTATGCAACGCCT 60.392 55.000 0.00 0.00 0.00 5.52
211 212 0.324943 ACTCCACTATGCAACGCCTT 59.675 50.000 0.00 0.00 0.00 4.35
212 213 1.271379 ACTCCACTATGCAACGCCTTT 60.271 47.619 0.00 0.00 0.00 3.11
213 214 1.131126 CTCCACTATGCAACGCCTTTG 59.869 52.381 0.00 0.00 38.37 2.77
214 215 1.164411 CCACTATGCAACGCCTTTGA 58.836 50.000 0.00 0.00 37.39 2.69
215 216 1.135689 CCACTATGCAACGCCTTTGAC 60.136 52.381 0.00 0.00 37.39 3.18
216 217 1.806542 CACTATGCAACGCCTTTGACT 59.193 47.619 0.00 0.00 37.39 3.41
217 218 2.226437 CACTATGCAACGCCTTTGACTT 59.774 45.455 0.00 0.00 37.39 3.01
218 219 3.435327 CACTATGCAACGCCTTTGACTTA 59.565 43.478 0.00 0.00 37.39 2.24
219 220 3.684788 ACTATGCAACGCCTTTGACTTAG 59.315 43.478 0.00 3.90 37.39 2.18
220 221 1.234821 TGCAACGCCTTTGACTTAGG 58.765 50.000 0.00 0.00 37.39 2.69
226 227 2.768834 CCTTTGACTTAGGCTCCGC 58.231 57.895 0.00 0.00 0.00 5.54
227 228 0.036388 CCTTTGACTTAGGCTCCGCA 60.036 55.000 0.00 0.00 0.00 5.69
228 229 1.610624 CCTTTGACTTAGGCTCCGCAA 60.611 52.381 0.00 0.00 0.00 4.85
229 230 1.734465 CTTTGACTTAGGCTCCGCAAG 59.266 52.381 0.00 0.00 0.00 4.01
276 277 4.389576 CGAGGCGCAACAACCAGC 62.390 66.667 10.83 0.00 0.00 4.85
280 281 4.980903 GCGCAACAACCAGCCGTG 62.981 66.667 0.30 0.00 0.00 4.94
281 282 4.980903 CGCAACAACCAGCCGTGC 62.981 66.667 0.00 0.00 0.00 5.34
282 283 3.898509 GCAACAACCAGCCGTGCA 61.899 61.111 0.00 0.00 0.00 4.57
283 284 2.332514 CAACAACCAGCCGTGCAG 59.667 61.111 0.00 0.00 0.00 4.41
284 285 3.595758 AACAACCAGCCGTGCAGC 61.596 61.111 0.00 0.00 0.00 5.25
308 309 3.121030 GCGCTAGGCACCACACAG 61.121 66.667 0.00 0.00 42.87 3.66
309 310 2.343758 CGCTAGGCACCACACAGT 59.656 61.111 0.00 0.00 0.00 3.55
310 311 2.029288 CGCTAGGCACCACACAGTG 61.029 63.158 0.00 0.00 40.88 3.66
311 312 1.071471 GCTAGGCACCACACAGTGT 59.929 57.895 0.00 0.00 40.04 3.55
312 313 0.320374 GCTAGGCACCACACAGTGTA 59.680 55.000 5.69 0.00 40.04 2.90
313 314 1.270625 GCTAGGCACCACACAGTGTAA 60.271 52.381 5.69 0.00 40.04 2.41
314 315 2.615493 GCTAGGCACCACACAGTGTAAT 60.615 50.000 5.69 0.00 40.04 1.89
315 316 1.896220 AGGCACCACACAGTGTAATG 58.104 50.000 5.69 8.82 40.04 1.90
316 317 1.142870 AGGCACCACACAGTGTAATGT 59.857 47.619 5.69 1.31 40.04 2.71
323 324 1.673760 CACAGTGTAATGTGCAACGC 58.326 50.000 0.00 0.00 43.69 4.84
324 325 0.591170 ACAGTGTAATGTGCAACGCC 59.409 50.000 0.00 0.00 42.39 5.68
325 326 0.874390 CAGTGTAATGTGCAACGCCT 59.126 50.000 0.00 0.00 42.39 5.52
326 327 2.073056 CAGTGTAATGTGCAACGCCTA 58.927 47.619 0.00 0.00 42.39 3.93
327 328 2.094258 CAGTGTAATGTGCAACGCCTAG 59.906 50.000 0.00 0.00 42.39 3.02
328 329 1.083489 TGTAATGTGCAACGCCTAGC 58.917 50.000 0.00 0.00 42.39 3.42
346 347 2.711924 GCTTAGGCGCTGCACATC 59.288 61.111 7.64 0.00 0.00 3.06
347 348 3.009140 CTTAGGCGCTGCACATCG 58.991 61.111 7.64 0.00 0.00 3.84
348 349 1.519234 CTTAGGCGCTGCACATCGA 60.519 57.895 7.64 0.00 0.00 3.59
349 350 1.756375 CTTAGGCGCTGCACATCGAC 61.756 60.000 7.64 0.00 0.00 4.20
350 351 2.225791 TTAGGCGCTGCACATCGACT 62.226 55.000 7.64 7.47 46.93 4.18
351 352 2.225791 TAGGCGCTGCACATCGACTT 62.226 55.000 7.64 0.00 42.06 3.01
352 353 1.809619 GGCGCTGCACATCGACTTA 60.810 57.895 7.64 0.00 0.00 2.24
353 354 1.345176 GCGCTGCACATCGACTTAC 59.655 57.895 0.00 0.00 0.00 2.34
354 355 1.625870 CGCTGCACATCGACTTACG 59.374 57.895 0.00 0.00 44.09 3.18
355 356 1.345176 GCTGCACATCGACTTACGC 59.655 57.895 0.00 0.00 42.26 4.42
356 357 1.999051 CTGCACATCGACTTACGCC 59.001 57.895 0.00 0.00 42.26 5.68
357 358 1.742900 CTGCACATCGACTTACGCCG 61.743 60.000 0.00 0.00 42.26 6.46
358 359 2.995482 CACATCGACTTACGCCGC 59.005 61.111 0.00 0.00 42.26 6.53
359 360 2.578713 ACATCGACTTACGCCGCG 60.579 61.111 12.14 12.14 42.26 6.46
360 361 2.578713 CATCGACTTACGCCGCGT 60.579 61.111 23.72 23.72 44.35 6.01
361 362 2.277756 ATCGACTTACGCCGCGTC 60.278 61.111 23.94 7.00 41.54 5.19
386 387 2.612115 CCCTCCCCAGGCAGTTCT 60.612 66.667 0.00 0.00 38.72 3.01
387 388 2.234296 CCCTCCCCAGGCAGTTCTT 61.234 63.158 0.00 0.00 38.72 2.52
388 389 1.770324 CCTCCCCAGGCAGTTCTTT 59.230 57.895 0.00 0.00 30.98 2.52
389 390 0.322906 CCTCCCCAGGCAGTTCTTTC 60.323 60.000 0.00 0.00 30.98 2.62
390 391 0.322906 CTCCCCAGGCAGTTCTTTCC 60.323 60.000 0.00 0.00 0.00 3.13
391 392 0.772124 TCCCCAGGCAGTTCTTTCCT 60.772 55.000 0.00 0.00 0.00 3.36
392 393 0.322906 CCCCAGGCAGTTCTTTCCTC 60.323 60.000 0.00 0.00 0.00 3.71
393 394 0.695347 CCCAGGCAGTTCTTTCCTCT 59.305 55.000 0.00 0.00 0.00 3.69
394 395 1.339535 CCCAGGCAGTTCTTTCCTCTC 60.340 57.143 0.00 0.00 0.00 3.20
395 396 1.339535 CCAGGCAGTTCTTTCCTCTCC 60.340 57.143 0.00 0.00 0.00 3.71
396 397 0.988063 AGGCAGTTCTTTCCTCTCCC 59.012 55.000 0.00 0.00 0.00 4.30
397 398 0.693049 GGCAGTTCTTTCCTCTCCCA 59.307 55.000 0.00 0.00 0.00 4.37
398 399 1.339535 GGCAGTTCTTTCCTCTCCCAG 60.340 57.143 0.00 0.00 0.00 4.45
399 400 1.349357 GCAGTTCTTTCCTCTCCCAGT 59.651 52.381 0.00 0.00 0.00 4.00
400 401 2.614229 GCAGTTCTTTCCTCTCCCAGTC 60.614 54.545 0.00 0.00 0.00 3.51
401 402 2.634940 CAGTTCTTTCCTCTCCCAGTCA 59.365 50.000 0.00 0.00 0.00 3.41
402 403 2.903135 AGTTCTTTCCTCTCCCAGTCAG 59.097 50.000 0.00 0.00 0.00 3.51
403 404 2.635427 GTTCTTTCCTCTCCCAGTCAGT 59.365 50.000 0.00 0.00 0.00 3.41
404 405 2.977808 TCTTTCCTCTCCCAGTCAGTT 58.022 47.619 0.00 0.00 0.00 3.16
405 406 2.900546 TCTTTCCTCTCCCAGTCAGTTC 59.099 50.000 0.00 0.00 0.00 3.01
406 407 1.645710 TTCCTCTCCCAGTCAGTTCC 58.354 55.000 0.00 0.00 0.00 3.62
407 408 0.787084 TCCTCTCCCAGTCAGTTCCT 59.213 55.000 0.00 0.00 0.00 3.36
408 409 1.190643 CCTCTCCCAGTCAGTTCCTC 58.809 60.000 0.00 0.00 0.00 3.71
409 410 1.272985 CCTCTCCCAGTCAGTTCCTCT 60.273 57.143 0.00 0.00 0.00 3.69
410 411 2.099405 CTCTCCCAGTCAGTTCCTCTC 58.901 57.143 0.00 0.00 0.00 3.20
411 412 1.713647 TCTCCCAGTCAGTTCCTCTCT 59.286 52.381 0.00 0.00 0.00 3.10
412 413 2.920271 TCTCCCAGTCAGTTCCTCTCTA 59.080 50.000 0.00 0.00 0.00 2.43
413 414 3.529734 TCTCCCAGTCAGTTCCTCTCTAT 59.470 47.826 0.00 0.00 0.00 1.98
414 415 4.727332 TCTCCCAGTCAGTTCCTCTCTATA 59.273 45.833 0.00 0.00 0.00 1.31
415 416 5.193930 TCTCCCAGTCAGTTCCTCTCTATAA 59.806 44.000 0.00 0.00 0.00 0.98
416 417 5.838955 TCCCAGTCAGTTCCTCTCTATAAA 58.161 41.667 0.00 0.00 0.00 1.40
417 418 5.657302 TCCCAGTCAGTTCCTCTCTATAAAC 59.343 44.000 0.00 0.00 0.00 2.01
418 419 5.422331 CCCAGTCAGTTCCTCTCTATAAACA 59.578 44.000 0.00 0.00 0.00 2.83
419 420 6.406400 CCCAGTCAGTTCCTCTCTATAAACAG 60.406 46.154 0.00 0.00 0.00 3.16
420 421 6.378564 CCAGTCAGTTCCTCTCTATAAACAGA 59.621 42.308 0.00 0.00 0.00 3.41
421 422 7.416213 CCAGTCAGTTCCTCTCTATAAACAGAG 60.416 44.444 0.00 0.00 42.96 3.35
422 423 7.338196 CAGTCAGTTCCTCTCTATAAACAGAGA 59.662 40.741 3.04 3.04 46.93 3.10
429 430 4.138290 TCTCTATAAACAGAGAGGAGCGG 58.862 47.826 0.00 0.00 44.82 5.52
430 431 2.623889 TCTATAAACAGAGAGGAGCGGC 59.376 50.000 0.00 0.00 0.00 6.53
431 432 0.103208 ATAAACAGAGAGGAGCGGCG 59.897 55.000 0.51 0.51 0.00 6.46
432 433 1.945354 TAAACAGAGAGGAGCGGCGG 61.945 60.000 9.78 0.00 0.00 6.13
450 451 3.560251 CGCCCCATTCGGATCCCT 61.560 66.667 6.06 0.00 0.00 4.20
451 452 2.432123 GCCCCATTCGGATCCCTC 59.568 66.667 6.06 0.00 0.00 4.30
452 453 3.161557 CCCCATTCGGATCCCTCC 58.838 66.667 6.06 0.00 38.29 4.30
453 454 2.529744 CCCCATTCGGATCCCTCCC 61.530 68.421 6.06 0.00 38.45 4.30
454 455 1.770110 CCCATTCGGATCCCTCCCA 60.770 63.158 6.06 0.00 38.45 4.37
455 456 1.451936 CCATTCGGATCCCTCCCAC 59.548 63.158 6.06 0.00 38.45 4.61
456 457 1.344953 CCATTCGGATCCCTCCCACA 61.345 60.000 6.06 0.00 38.45 4.17
457 458 0.179045 CATTCGGATCCCTCCCACAC 60.179 60.000 6.06 0.00 38.45 3.82
458 459 1.345715 ATTCGGATCCCTCCCACACC 61.346 60.000 6.06 0.00 38.45 4.16
459 460 3.480133 CGGATCCCTCCCACACCC 61.480 72.222 6.06 0.00 38.45 4.61
460 461 3.097162 GGATCCCTCCCACACCCC 61.097 72.222 0.00 0.00 35.28 4.95
461 462 2.042930 GATCCCTCCCACACCCCT 59.957 66.667 0.00 0.00 0.00 4.79
462 463 2.042930 ATCCCTCCCACACCCCTC 59.957 66.667 0.00 0.00 0.00 4.30
463 464 2.553438 GATCCCTCCCACACCCCTCT 62.553 65.000 0.00 0.00 0.00 3.69
464 465 2.553438 ATCCCTCCCACACCCCTCTC 62.553 65.000 0.00 0.00 0.00 3.20
465 466 2.122729 CCTCCCACACCCCTCTCA 59.877 66.667 0.00 0.00 0.00 3.27
466 467 1.992277 CCTCCCACACCCCTCTCAG 60.992 68.421 0.00 0.00 0.00 3.35
467 468 1.079256 CTCCCACACCCCTCTCAGA 59.921 63.158 0.00 0.00 0.00 3.27
468 469 0.326048 CTCCCACACCCCTCTCAGAT 60.326 60.000 0.00 0.00 0.00 2.90
469 470 0.325671 TCCCACACCCCTCTCAGATC 60.326 60.000 0.00 0.00 0.00 2.75
470 471 0.326048 CCCACACCCCTCTCAGATCT 60.326 60.000 0.00 0.00 0.00 2.75
471 472 0.829333 CCACACCCCTCTCAGATCTG 59.171 60.000 17.07 17.07 0.00 2.90
472 473 1.620798 CCACACCCCTCTCAGATCTGA 60.621 57.143 23.75 23.75 38.06 3.27
473 474 2.182827 CACACCCCTCTCAGATCTGAA 58.817 52.381 25.09 15.09 39.39 3.02
474 475 2.168106 CACACCCCTCTCAGATCTGAAG 59.832 54.545 25.09 21.87 39.39 3.02
475 476 2.043664 ACACCCCTCTCAGATCTGAAGA 59.956 50.000 25.09 20.97 39.39 2.87
476 477 3.307506 CACCCCTCTCAGATCTGAAGAT 58.692 50.000 25.09 11.60 39.39 2.40
477 478 3.710677 CACCCCTCTCAGATCTGAAGATT 59.289 47.826 25.09 6.19 39.39 2.40
478 479 4.163839 CACCCCTCTCAGATCTGAAGATTT 59.836 45.833 25.09 6.71 39.39 2.17
479 480 4.787534 ACCCCTCTCAGATCTGAAGATTTT 59.212 41.667 25.09 7.20 39.39 1.82
480 481 5.966935 ACCCCTCTCAGATCTGAAGATTTTA 59.033 40.000 25.09 1.70 39.39 1.52
481 482 6.099557 ACCCCTCTCAGATCTGAAGATTTTAG 59.900 42.308 25.09 11.73 39.39 1.85
482 483 5.990996 CCCTCTCAGATCTGAAGATTTTAGC 59.009 44.000 25.09 0.00 39.39 3.09
483 484 5.990996 CCTCTCAGATCTGAAGATTTTAGCC 59.009 44.000 25.09 0.00 39.39 3.93
484 485 5.595885 TCTCAGATCTGAAGATTTTAGCCG 58.404 41.667 25.09 9.88 39.39 5.52
485 486 5.127845 TCTCAGATCTGAAGATTTTAGCCGT 59.872 40.000 25.09 0.00 39.39 5.68
486 487 5.111989 TCAGATCTGAAGATTTTAGCCGTG 58.888 41.667 23.17 0.00 36.53 4.94
487 488 4.272018 CAGATCTGAAGATTTTAGCCGTGG 59.728 45.833 18.34 0.00 34.37 4.94
488 489 3.973206 TCTGAAGATTTTAGCCGTGGA 57.027 42.857 0.00 0.00 0.00 4.02
489 490 4.487714 TCTGAAGATTTTAGCCGTGGAT 57.512 40.909 0.00 0.00 0.00 3.41
490 491 4.843728 TCTGAAGATTTTAGCCGTGGATT 58.156 39.130 0.00 0.00 0.00 3.01
491 492 4.876107 TCTGAAGATTTTAGCCGTGGATTC 59.124 41.667 0.00 0.00 0.00 2.52
492 493 3.621268 TGAAGATTTTAGCCGTGGATTCG 59.379 43.478 0.00 0.00 0.00 3.34
493 494 3.536956 AGATTTTAGCCGTGGATTCGA 57.463 42.857 0.00 0.00 0.00 3.71
494 495 4.073293 AGATTTTAGCCGTGGATTCGAT 57.927 40.909 0.00 0.00 0.00 3.59
495 496 4.058817 AGATTTTAGCCGTGGATTCGATC 58.941 43.478 0.00 0.00 0.00 3.69
496 497 3.536956 TTTTAGCCGTGGATTCGATCT 57.463 42.857 0.00 0.00 0.00 2.75
497 498 2.795175 TTAGCCGTGGATTCGATCTC 57.205 50.000 0.00 0.00 0.00 2.75
498 499 0.959553 TAGCCGTGGATTCGATCTCC 59.040 55.000 7.44 7.44 0.00 3.71
499 500 1.043116 AGCCGTGGATTCGATCTCCA 61.043 55.000 12.02 12.02 40.49 3.86
500 501 0.179084 GCCGTGGATTCGATCTCCAA 60.179 55.000 16.42 1.99 44.19 3.53
501 502 1.541233 GCCGTGGATTCGATCTCCAAT 60.541 52.381 16.42 0.00 44.19 3.16
502 503 2.408050 CCGTGGATTCGATCTCCAATC 58.592 52.381 16.42 6.87 44.19 2.67
503 504 2.408050 CGTGGATTCGATCTCCAATCC 58.592 52.381 16.42 15.96 44.19 3.01
504 505 2.772287 GTGGATTCGATCTCCAATCCC 58.228 52.381 16.42 10.52 45.34 3.85
505 506 2.370189 GTGGATTCGATCTCCAATCCCT 59.630 50.000 16.42 0.00 45.34 4.20
506 507 2.634940 TGGATTCGATCTCCAATCCCTC 59.365 50.000 18.40 3.00 45.34 4.30
507 508 2.027653 GGATTCGATCTCCAATCCCTCC 60.028 54.545 13.39 0.00 41.62 4.30
508 509 2.478872 TTCGATCTCCAATCCCTCCT 57.521 50.000 0.00 0.00 0.00 3.69
509 510 3.612795 TTCGATCTCCAATCCCTCCTA 57.387 47.619 0.00 0.00 0.00 2.94
510 511 2.877866 TCGATCTCCAATCCCTCCTAC 58.122 52.381 0.00 0.00 0.00 3.18
511 512 2.447429 TCGATCTCCAATCCCTCCTACT 59.553 50.000 0.00 0.00 0.00 2.57
512 513 3.656264 TCGATCTCCAATCCCTCCTACTA 59.344 47.826 0.00 0.00 0.00 1.82
513 514 4.013728 CGATCTCCAATCCCTCCTACTAG 58.986 52.174 0.00 0.00 0.00 2.57
514 515 3.905493 TCTCCAATCCCTCCTACTAGG 57.095 52.381 0.00 0.00 36.46 3.02
515 516 3.140143 TCTCCAATCCCTCCTACTAGGT 58.860 50.000 1.83 0.00 36.53 3.08
516 517 4.322168 TCTCCAATCCCTCCTACTAGGTA 58.678 47.826 1.83 0.00 36.53 3.08
517 518 4.735537 TCTCCAATCCCTCCTACTAGGTAA 59.264 45.833 1.83 0.00 36.53 2.85
518 519 5.197189 TCTCCAATCCCTCCTACTAGGTAAA 59.803 44.000 1.83 0.00 36.53 2.01
519 520 5.214293 TCCAATCCCTCCTACTAGGTAAAC 58.786 45.833 1.83 0.00 36.53 2.01
520 521 5.042827 TCCAATCCCTCCTACTAGGTAAACT 60.043 44.000 1.83 0.00 36.53 2.66
521 522 5.304871 CCAATCCCTCCTACTAGGTAAACTC 59.695 48.000 1.83 0.00 36.53 3.01
522 523 4.533001 TCCCTCCTACTAGGTAAACTCC 57.467 50.000 1.83 0.00 36.53 3.85
523 524 4.125282 TCCCTCCTACTAGGTAAACTCCT 58.875 47.826 1.83 0.00 41.20 3.69
524 525 4.167697 TCCCTCCTACTAGGTAAACTCCTC 59.832 50.000 1.83 0.00 38.86 3.71
525 526 4.472496 CCTCCTACTAGGTAAACTCCTCC 58.528 52.174 1.83 0.00 38.86 4.30
526 527 4.136051 CTCCTACTAGGTAAACTCCTCCG 58.864 52.174 1.83 0.00 38.86 4.63
527 528 3.525199 TCCTACTAGGTAAACTCCTCCGT 59.475 47.826 1.83 0.00 38.86 4.69
528 529 4.018050 TCCTACTAGGTAAACTCCTCCGTT 60.018 45.833 1.83 0.00 38.86 4.44
529 530 4.337836 CCTACTAGGTAAACTCCTCCGTTC 59.662 50.000 0.00 0.00 38.86 3.95
530 531 3.095332 ACTAGGTAAACTCCTCCGTTCC 58.905 50.000 0.00 0.00 38.86 3.62
531 532 1.273759 AGGTAAACTCCTCCGTTCCC 58.726 55.000 0.00 0.00 31.32 3.97
532 533 1.203275 AGGTAAACTCCTCCGTTCCCT 60.203 52.381 0.00 0.00 31.32 4.20
533 534 1.627329 GGTAAACTCCTCCGTTCCCTT 59.373 52.381 0.00 0.00 0.00 3.95
534 535 2.354503 GGTAAACTCCTCCGTTCCCTTC 60.355 54.545 0.00 0.00 0.00 3.46
535 536 1.730851 AAACTCCTCCGTTCCCTTCT 58.269 50.000 0.00 0.00 0.00 2.85
536 537 1.730851 AACTCCTCCGTTCCCTTCTT 58.269 50.000 0.00 0.00 0.00 2.52
537 538 1.730851 ACTCCTCCGTTCCCTTCTTT 58.269 50.000 0.00 0.00 0.00 2.52
538 539 2.055579 ACTCCTCCGTTCCCTTCTTTT 58.944 47.619 0.00 0.00 0.00 2.27
539 540 2.038689 ACTCCTCCGTTCCCTTCTTTTC 59.961 50.000 0.00 0.00 0.00 2.29
540 541 1.350019 TCCTCCGTTCCCTTCTTTTCC 59.650 52.381 0.00 0.00 0.00 3.13
541 542 1.351350 CCTCCGTTCCCTTCTTTTCCT 59.649 52.381 0.00 0.00 0.00 3.36
542 543 2.615747 CCTCCGTTCCCTTCTTTTCCTC 60.616 54.545 0.00 0.00 0.00 3.71
543 544 2.038557 CTCCGTTCCCTTCTTTTCCTCA 59.961 50.000 0.00 0.00 0.00 3.86
544 545 2.038557 TCCGTTCCCTTCTTTTCCTCAG 59.961 50.000 0.00 0.00 0.00 3.35
545 546 2.224548 CCGTTCCCTTCTTTTCCTCAGT 60.225 50.000 0.00 0.00 0.00 3.41
546 547 3.007614 CCGTTCCCTTCTTTTCCTCAGTA 59.992 47.826 0.00 0.00 0.00 2.74
547 548 4.504340 CCGTTCCCTTCTTTTCCTCAGTAA 60.504 45.833 0.00 0.00 0.00 2.24
548 549 5.061179 CGTTCCCTTCTTTTCCTCAGTAAA 58.939 41.667 0.00 0.00 0.00 2.01
549 550 5.705905 CGTTCCCTTCTTTTCCTCAGTAAAT 59.294 40.000 0.00 0.00 0.00 1.40
550 551 6.206829 CGTTCCCTTCTTTTCCTCAGTAAATT 59.793 38.462 0.00 0.00 0.00 1.82
551 552 7.573283 CGTTCCCTTCTTTTCCTCAGTAAATTC 60.573 40.741 0.00 0.00 0.00 2.17
552 553 5.938125 TCCCTTCTTTTCCTCAGTAAATTCG 59.062 40.000 0.00 0.00 0.00 3.34
553 554 5.705905 CCCTTCTTTTCCTCAGTAAATTCGT 59.294 40.000 0.00 0.00 0.00 3.85
554 555 6.206829 CCCTTCTTTTCCTCAGTAAATTCGTT 59.793 38.462 0.00 0.00 0.00 3.85
555 556 7.078228 CCTTCTTTTCCTCAGTAAATTCGTTG 58.922 38.462 0.00 0.00 0.00 4.10
556 557 7.255139 CCTTCTTTTCCTCAGTAAATTCGTTGT 60.255 37.037 0.00 0.00 0.00 3.32
557 558 7.186021 TCTTTTCCTCAGTAAATTCGTTGTC 57.814 36.000 0.00 0.00 0.00 3.18
558 559 6.764085 TCTTTTCCTCAGTAAATTCGTTGTCA 59.236 34.615 0.00 0.00 0.00 3.58
559 560 7.444183 TCTTTTCCTCAGTAAATTCGTTGTCAT 59.556 33.333 0.00 0.00 0.00 3.06
560 561 7.504924 TTTCCTCAGTAAATTCGTTGTCATT 57.495 32.000 0.00 0.00 0.00 2.57
561 562 7.504924 TTCCTCAGTAAATTCGTTGTCATTT 57.495 32.000 0.00 0.00 0.00 2.32
562 563 7.504924 TCCTCAGTAAATTCGTTGTCATTTT 57.495 32.000 0.00 0.00 0.00 1.82
563 564 8.610248 TCCTCAGTAAATTCGTTGTCATTTTA 57.390 30.769 0.00 0.00 0.00 1.52
564 565 8.717821 TCCTCAGTAAATTCGTTGTCATTTTAG 58.282 33.333 0.00 0.00 0.00 1.85
565 566 8.717821 CCTCAGTAAATTCGTTGTCATTTTAGA 58.282 33.333 0.00 0.00 0.00 2.10
566 567 9.746711 CTCAGTAAATTCGTTGTCATTTTAGAG 57.253 33.333 0.00 0.00 0.00 2.43
567 568 9.483916 TCAGTAAATTCGTTGTCATTTTAGAGA 57.516 29.630 0.00 0.00 0.00 3.10
570 571 9.490663 GTAAATTCGTTGTCATTTTAGAGATGG 57.509 33.333 0.00 0.00 0.00 3.51
571 572 6.683974 ATTCGTTGTCATTTTAGAGATGGG 57.316 37.500 0.00 0.00 0.00 4.00
572 573 5.160607 TCGTTGTCATTTTAGAGATGGGT 57.839 39.130 0.00 0.00 0.00 4.51
573 574 5.556915 TCGTTGTCATTTTAGAGATGGGTT 58.443 37.500 0.00 0.00 0.00 4.11
574 575 6.703319 TCGTTGTCATTTTAGAGATGGGTTA 58.297 36.000 0.00 0.00 0.00 2.85
575 576 7.162761 TCGTTGTCATTTTAGAGATGGGTTAA 58.837 34.615 0.00 0.00 0.00 2.01
576 577 7.827236 TCGTTGTCATTTTAGAGATGGGTTAAT 59.173 33.333 0.00 0.00 0.00 1.40
577 578 8.458843 CGTTGTCATTTTAGAGATGGGTTAATT 58.541 33.333 0.00 0.00 0.00 1.40
587 588 7.588497 AGAGATGGGTTAATTATCCTTTTGC 57.412 36.000 11.51 1.56 0.00 3.68
588 589 6.551227 AGAGATGGGTTAATTATCCTTTTGCC 59.449 38.462 11.51 0.00 0.00 4.52
589 590 5.602561 AGATGGGTTAATTATCCTTTTGCCC 59.397 40.000 11.51 0.00 0.00 5.36
590 591 4.954089 TGGGTTAATTATCCTTTTGCCCT 58.046 39.130 11.51 0.00 34.88 5.19
591 592 4.959839 TGGGTTAATTATCCTTTTGCCCTC 59.040 41.667 11.51 0.00 34.88 4.30
592 593 4.959839 GGGTTAATTATCCTTTTGCCCTCA 59.040 41.667 11.51 0.00 0.00 3.86
593 594 5.069119 GGGTTAATTATCCTTTTGCCCTCAG 59.931 44.000 11.51 0.00 0.00 3.35
594 595 5.656859 GGTTAATTATCCTTTTGCCCTCAGT 59.343 40.000 5.46 0.00 0.00 3.41
595 596 6.405842 GGTTAATTATCCTTTTGCCCTCAGTG 60.406 42.308 5.46 0.00 0.00 3.66
596 597 2.806945 TATCCTTTTGCCCTCAGTGG 57.193 50.000 0.00 0.00 0.00 4.00
597 598 0.779997 ATCCTTTTGCCCTCAGTGGT 59.220 50.000 0.00 0.00 0.00 4.16
598 599 0.178992 TCCTTTTGCCCTCAGTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
599 600 0.468029 CCTTTTGCCCTCAGTGGTGT 60.468 55.000 0.00 0.00 0.00 4.16
600 601 0.954452 CTTTTGCCCTCAGTGGTGTC 59.046 55.000 0.00 0.00 0.00 3.67
601 602 0.550914 TTTTGCCCTCAGTGGTGTCT 59.449 50.000 0.00 0.00 0.00 3.41
602 603 0.550914 TTTGCCCTCAGTGGTGTCTT 59.449 50.000 0.00 0.00 0.00 3.01
603 604 0.550914 TTGCCCTCAGTGGTGTCTTT 59.449 50.000 0.00 0.00 0.00 2.52
604 605 0.179020 TGCCCTCAGTGGTGTCTTTG 60.179 55.000 0.00 0.00 0.00 2.77
605 606 0.179018 GCCCTCAGTGGTGTCTTTGT 60.179 55.000 0.00 0.00 0.00 2.83
606 607 1.597742 CCCTCAGTGGTGTCTTTGTG 58.402 55.000 0.00 0.00 0.00 3.33
607 608 0.947244 CCTCAGTGGTGTCTTTGTGC 59.053 55.000 0.00 0.00 0.00 4.57
608 609 1.475751 CCTCAGTGGTGTCTTTGTGCT 60.476 52.381 0.00 0.00 0.00 4.40
609 610 1.869767 CTCAGTGGTGTCTTTGTGCTC 59.130 52.381 0.00 0.00 0.00 4.26
610 611 1.209261 TCAGTGGTGTCTTTGTGCTCA 59.791 47.619 0.00 0.00 0.00 4.26
611 612 1.600957 CAGTGGTGTCTTTGTGCTCAG 59.399 52.381 0.00 0.00 0.00 3.35
612 613 1.210478 AGTGGTGTCTTTGTGCTCAGT 59.790 47.619 0.00 0.00 0.00 3.41
613 614 2.017049 GTGGTGTCTTTGTGCTCAGTT 58.983 47.619 0.00 0.00 0.00 3.16
614 615 2.423538 GTGGTGTCTTTGTGCTCAGTTT 59.576 45.455 0.00 0.00 0.00 2.66
615 616 3.088532 TGGTGTCTTTGTGCTCAGTTTT 58.911 40.909 0.00 0.00 0.00 2.43
616 617 3.119531 TGGTGTCTTTGTGCTCAGTTTTG 60.120 43.478 0.00 0.00 0.00 2.44
617 618 2.854185 GTGTCTTTGTGCTCAGTTTTGC 59.146 45.455 0.00 0.00 0.00 3.68
618 619 2.159254 TGTCTTTGTGCTCAGTTTTGCC 60.159 45.455 0.00 0.00 0.00 4.52
619 620 1.408702 TCTTTGTGCTCAGTTTTGCCC 59.591 47.619 0.00 0.00 0.00 5.36
620 621 1.410153 CTTTGTGCTCAGTTTTGCCCT 59.590 47.619 0.00 0.00 0.00 5.19
621 622 1.032014 TTGTGCTCAGTTTTGCCCTC 58.968 50.000 0.00 0.00 0.00 4.30
622 623 0.106769 TGTGCTCAGTTTTGCCCTCA 60.107 50.000 0.00 0.00 0.00 3.86
623 624 0.595095 GTGCTCAGTTTTGCCCTCAG 59.405 55.000 0.00 0.00 0.00 3.35
624 625 0.473755 TGCTCAGTTTTGCCCTCAGA 59.526 50.000 0.00 0.00 0.00 3.27
625 626 1.074405 TGCTCAGTTTTGCCCTCAGAT 59.926 47.619 0.00 0.00 0.00 2.90
626 627 1.471684 GCTCAGTTTTGCCCTCAGATG 59.528 52.381 0.00 0.00 0.00 2.90
627 628 1.471684 CTCAGTTTTGCCCTCAGATGC 59.528 52.381 0.00 0.00 0.00 3.91
628 629 1.202915 TCAGTTTTGCCCTCAGATGCA 60.203 47.619 0.00 0.00 35.27 3.96
629 630 1.614903 CAGTTTTGCCCTCAGATGCAA 59.385 47.619 0.00 3.89 45.12 4.08
1043 1182 4.218578 CTCGCGGATGCAGAGCCT 62.219 66.667 6.13 0.00 42.97 4.58
1337 1477 4.151582 GCGCATGCTGCCCCAAAT 62.152 61.111 17.13 0.00 41.12 2.32
2043 2575 3.072486 GCGCTGGTAACCGCTAGGA 62.072 63.158 0.00 0.00 46.14 2.94
2044 2576 1.226888 CGCTGGTAACCGCTAGGAC 60.227 63.158 0.00 0.00 41.02 3.85
2045 2577 1.895238 GCTGGTAACCGCTAGGACA 59.105 57.895 0.00 0.00 41.02 4.02
2046 2578 0.248289 GCTGGTAACCGCTAGGACAA 59.752 55.000 0.00 0.00 41.02 3.18
2047 2579 1.338389 GCTGGTAACCGCTAGGACAAA 60.338 52.381 0.00 0.00 41.02 2.83
2048 2580 2.679930 GCTGGTAACCGCTAGGACAAAT 60.680 50.000 0.00 0.00 41.02 2.32
2049 2581 2.936498 CTGGTAACCGCTAGGACAAATG 59.064 50.000 0.00 0.00 41.02 2.32
2050 2582 2.285977 GGTAACCGCTAGGACAAATGG 58.714 52.381 0.00 0.00 41.02 3.16
2051 2583 1.669265 GTAACCGCTAGGACAAATGGC 59.331 52.381 0.00 0.00 41.02 4.40
2052 2584 0.037590 AACCGCTAGGACAAATGGCA 59.962 50.000 0.00 0.00 41.02 4.92
2053 2585 0.037590 ACCGCTAGGACAAATGGCAA 59.962 50.000 0.00 0.00 41.02 4.52
2054 2586 0.734889 CCGCTAGGACAAATGGCAAG 59.265 55.000 0.00 0.00 41.02 4.01
2055 2587 1.678728 CCGCTAGGACAAATGGCAAGA 60.679 52.381 0.00 0.00 41.02 3.02
2056 2588 1.667724 CGCTAGGACAAATGGCAAGAG 59.332 52.381 0.00 0.00 0.00 2.85
2057 2589 2.716217 GCTAGGACAAATGGCAAGAGT 58.284 47.619 0.00 0.00 0.00 3.24
2058 2590 3.084786 GCTAGGACAAATGGCAAGAGTT 58.915 45.455 0.00 0.00 0.00 3.01
2059 2591 3.507622 GCTAGGACAAATGGCAAGAGTTT 59.492 43.478 0.00 0.00 0.00 2.66
2060 2592 4.616835 GCTAGGACAAATGGCAAGAGTTTG 60.617 45.833 9.18 9.18 38.46 2.93
2061 2593 3.565307 AGGACAAATGGCAAGAGTTTGA 58.435 40.909 15.95 0.00 36.36 2.69
2062 2594 3.319122 AGGACAAATGGCAAGAGTTTGAC 59.681 43.478 15.95 10.58 43.00 3.18
2068 2600 1.620822 GGCAAGAGTTTGACATGGGT 58.379 50.000 0.00 0.00 42.21 4.51
2069 2601 2.790433 GGCAAGAGTTTGACATGGGTA 58.210 47.619 0.00 0.00 42.21 3.69
2070 2602 2.749621 GGCAAGAGTTTGACATGGGTAG 59.250 50.000 0.00 0.00 42.21 3.18
2071 2603 2.749621 GCAAGAGTTTGACATGGGTAGG 59.250 50.000 0.00 0.00 36.36 3.18
2072 2604 3.347216 CAAGAGTTTGACATGGGTAGGG 58.653 50.000 0.00 0.00 36.36 3.53
2073 2605 2.915869 AGAGTTTGACATGGGTAGGGA 58.084 47.619 0.00 0.00 0.00 4.20
2074 2606 3.256704 AGAGTTTGACATGGGTAGGGAA 58.743 45.455 0.00 0.00 0.00 3.97
2075 2607 3.264450 AGAGTTTGACATGGGTAGGGAAG 59.736 47.826 0.00 0.00 0.00 3.46
2076 2608 2.092323 GTTTGACATGGGTAGGGAAGC 58.908 52.381 0.00 0.00 0.00 3.86
2077 2609 1.367346 TTGACATGGGTAGGGAAGCA 58.633 50.000 0.00 0.00 0.00 3.91
2078 2610 1.367346 TGACATGGGTAGGGAAGCAA 58.633 50.000 0.00 0.00 0.00 3.91
2079 2611 1.922447 TGACATGGGTAGGGAAGCAAT 59.078 47.619 0.00 0.00 0.00 3.56
2080 2612 2.301346 GACATGGGTAGGGAAGCAATG 58.699 52.381 0.00 0.00 41.94 2.82
2081 2613 1.640670 ACATGGGTAGGGAAGCAATGT 59.359 47.619 0.00 0.00 43.91 2.71
2082 2614 2.849943 ACATGGGTAGGGAAGCAATGTA 59.150 45.455 0.00 0.00 46.27 2.29
2083 2615 3.463329 ACATGGGTAGGGAAGCAATGTAT 59.537 43.478 0.00 0.00 46.27 2.29
2084 2616 4.663120 ACATGGGTAGGGAAGCAATGTATA 59.337 41.667 0.00 0.00 46.27 1.47
2085 2617 4.699925 TGGGTAGGGAAGCAATGTATAC 57.300 45.455 0.00 0.00 0.00 1.47
2086 2618 4.041464 TGGGTAGGGAAGCAATGTATACA 58.959 43.478 8.27 8.27 0.00 2.29
2087 2619 4.475381 TGGGTAGGGAAGCAATGTATACAA 59.525 41.667 10.14 0.00 0.00 2.41
2088 2620 5.044772 TGGGTAGGGAAGCAATGTATACAAA 60.045 40.000 10.14 0.00 0.00 2.83
2089 2621 5.531287 GGGTAGGGAAGCAATGTATACAAAG 59.469 44.000 10.14 6.60 0.00 2.77
2090 2622 6.120220 GGTAGGGAAGCAATGTATACAAAGT 58.880 40.000 10.14 0.00 0.00 2.66
2091 2623 6.038271 GGTAGGGAAGCAATGTATACAAAGTG 59.962 42.308 10.14 9.56 0.00 3.16
2092 2624 5.815581 AGGGAAGCAATGTATACAAAGTGA 58.184 37.500 10.14 0.00 0.00 3.41
2093 2625 5.882557 AGGGAAGCAATGTATACAAAGTGAG 59.117 40.000 10.14 0.00 0.00 3.51
2094 2626 5.880332 GGGAAGCAATGTATACAAAGTGAGA 59.120 40.000 10.14 0.00 0.00 3.27
2095 2627 6.183360 GGGAAGCAATGTATACAAAGTGAGAC 60.183 42.308 10.14 4.03 0.00 3.36
2096 2628 6.595716 GGAAGCAATGTATACAAAGTGAGACT 59.404 38.462 10.14 0.00 0.00 3.24
2097 2629 6.974932 AGCAATGTATACAAAGTGAGACTG 57.025 37.500 10.14 0.00 0.00 3.51
2098 2630 6.467677 AGCAATGTATACAAAGTGAGACTGT 58.532 36.000 10.14 0.00 0.00 3.55
2099 2631 6.369890 AGCAATGTATACAAAGTGAGACTGTG 59.630 38.462 10.14 0.00 39.36 3.66
2100 2632 6.368791 GCAATGTATACAAAGTGAGACTGTGA 59.631 38.462 10.14 0.00 35.43 3.58
2101 2633 7.095229 GCAATGTATACAAAGTGAGACTGTGAA 60.095 37.037 10.14 0.00 35.43 3.18
2102 2634 8.773645 CAATGTATACAAAGTGAGACTGTGAAA 58.226 33.333 10.14 0.00 35.43 2.69
2103 2635 9.507329 AATGTATACAAAGTGAGACTGTGAAAT 57.493 29.630 10.14 0.00 35.43 2.17
2104 2636 8.902540 TGTATACAAAGTGAGACTGTGAAATT 57.097 30.769 2.20 0.00 35.43 1.82
2105 2637 9.337396 TGTATACAAAGTGAGACTGTGAAATTT 57.663 29.630 2.20 0.00 35.43 1.82
2106 2638 9.599322 GTATACAAAGTGAGACTGTGAAATTTG 57.401 33.333 0.00 0.00 35.43 2.32
2107 2639 6.515272 ACAAAGTGAGACTGTGAAATTTGT 57.485 33.333 0.00 6.67 35.43 2.83
2108 2640 6.555315 ACAAAGTGAGACTGTGAAATTTGTC 58.445 36.000 0.00 0.00 35.43 3.18
2109 2641 6.150976 ACAAAGTGAGACTGTGAAATTTGTCA 59.849 34.615 0.00 0.00 35.43 3.58
2110 2642 6.757897 AAGTGAGACTGTGAAATTTGTCAA 57.242 33.333 0.00 0.00 32.41 3.18
2111 2643 6.757897 AGTGAGACTGTGAAATTTGTCAAA 57.242 33.333 0.00 0.00 32.41 2.69
2112 2644 7.156876 AGTGAGACTGTGAAATTTGTCAAAA 57.843 32.000 1.31 0.00 32.41 2.44
2113 2645 7.601856 AGTGAGACTGTGAAATTTGTCAAAAA 58.398 30.769 1.31 0.00 32.41 1.94
2157 2689 1.422531 AAAAATTGTGCAGCTGGGGA 58.577 45.000 17.12 0.00 0.00 4.81
2158 2690 0.681175 AAAATTGTGCAGCTGGGGAC 59.319 50.000 17.12 1.80 0.00 4.46
2159 2691 0.178953 AAATTGTGCAGCTGGGGACT 60.179 50.000 17.12 0.00 0.00 3.85
2160 2692 0.610232 AATTGTGCAGCTGGGGACTC 60.610 55.000 17.12 0.00 0.00 3.36
2161 2693 2.809861 ATTGTGCAGCTGGGGACTCG 62.810 60.000 17.12 0.00 0.00 4.18
2162 2694 3.695606 GTGCAGCTGGGGACTCGA 61.696 66.667 17.12 0.00 0.00 4.04
2163 2695 2.922503 TGCAGCTGGGGACTCGAA 60.923 61.111 17.12 0.00 0.00 3.71
2164 2696 2.435059 GCAGCTGGGGACTCGAAC 60.435 66.667 17.12 0.00 0.00 3.95
2165 2697 2.266055 CAGCTGGGGACTCGAACC 59.734 66.667 5.57 0.28 0.00 3.62
2172 2704 1.295746 GGGACTCGAACCCAAGACC 59.704 63.158 18.78 1.90 46.05 3.85
2173 2705 1.080025 GGACTCGAACCCAAGACCG 60.080 63.158 0.00 0.00 0.00 4.79
2174 2706 1.737008 GACTCGAACCCAAGACCGC 60.737 63.158 0.00 0.00 0.00 5.68
2175 2707 2.809601 CTCGAACCCAAGACCGCG 60.810 66.667 0.00 0.00 0.00 6.46
2176 2708 3.569049 CTCGAACCCAAGACCGCGT 62.569 63.158 4.92 0.00 0.00 6.01
2177 2709 3.411351 CGAACCCAAGACCGCGTG 61.411 66.667 4.92 0.00 0.00 5.34
2178 2710 3.047877 GAACCCAAGACCGCGTGG 61.048 66.667 14.93 14.93 42.49 4.94
2179 2711 3.524648 GAACCCAAGACCGCGTGGA 62.525 63.158 24.59 0.00 45.22 4.02
2180 2712 2.798148 GAACCCAAGACCGCGTGGAT 62.798 60.000 24.59 6.86 45.22 3.41
2181 2713 2.046314 CCCAAGACCGCGTGGATT 60.046 61.111 24.59 13.17 45.22 3.01
2182 2714 1.674322 CCCAAGACCGCGTGGATTT 60.674 57.895 24.59 12.36 45.22 2.17
2183 2715 1.501741 CCAAGACCGCGTGGATTTG 59.498 57.895 24.59 22.45 45.22 2.32
2184 2716 1.234615 CCAAGACCGCGTGGATTTGT 61.235 55.000 24.59 0.00 45.22 2.83
2185 2717 0.110238 CAAGACCGCGTGGATTTGTG 60.110 55.000 24.59 8.18 39.21 3.33
2186 2718 1.234615 AAGACCGCGTGGATTTGTGG 61.235 55.000 24.59 0.00 41.55 4.17
2187 2719 2.112297 ACCGCGTGGATTTGTGGT 59.888 55.556 24.59 0.00 43.87 4.16
2188 2720 2.258013 ACCGCGTGGATTTGTGGTG 61.258 57.895 24.59 0.00 46.69 4.17
2189 2721 2.258013 CCGCGTGGATTTGTGGTGT 61.258 57.895 10.20 0.00 37.49 4.16
2190 2722 1.652012 CGCGTGGATTTGTGGTGTT 59.348 52.632 0.00 0.00 0.00 3.32
2191 2723 0.030101 CGCGTGGATTTGTGGTGTTT 59.970 50.000 0.00 0.00 0.00 2.83
2192 2724 1.264557 CGCGTGGATTTGTGGTGTTTA 59.735 47.619 0.00 0.00 0.00 2.01
2193 2725 2.664424 CGCGTGGATTTGTGGTGTTTAG 60.664 50.000 0.00 0.00 0.00 1.85
2194 2726 2.351350 GCGTGGATTTGTGGTGTTTAGG 60.351 50.000 0.00 0.00 0.00 2.69
2195 2727 2.227865 CGTGGATTTGTGGTGTTTAGGG 59.772 50.000 0.00 0.00 0.00 3.53
2196 2728 2.029380 GTGGATTTGTGGTGTTTAGGGC 60.029 50.000 0.00 0.00 0.00 5.19
2197 2729 2.158385 TGGATTTGTGGTGTTTAGGGCT 60.158 45.455 0.00 0.00 0.00 5.19
2198 2730 2.231235 GGATTTGTGGTGTTTAGGGCTG 59.769 50.000 0.00 0.00 0.00 4.85
2199 2731 2.445682 TTTGTGGTGTTTAGGGCTGT 57.554 45.000 0.00 0.00 0.00 4.40
2200 2732 1.686355 TTGTGGTGTTTAGGGCTGTG 58.314 50.000 0.00 0.00 0.00 3.66
2201 2733 0.821711 TGTGGTGTTTAGGGCTGTGC 60.822 55.000 0.00 0.00 0.00 4.57
2202 2734 0.537371 GTGGTGTTTAGGGCTGTGCT 60.537 55.000 0.00 0.00 0.00 4.40
2203 2735 0.537143 TGGTGTTTAGGGCTGTGCTG 60.537 55.000 0.00 0.00 0.00 4.41
2204 2736 1.244019 GGTGTTTAGGGCTGTGCTGG 61.244 60.000 0.00 0.00 0.00 4.85
2205 2737 0.537371 GTGTTTAGGGCTGTGCTGGT 60.537 55.000 0.00 0.00 0.00 4.00
2206 2738 1.060729 TGTTTAGGGCTGTGCTGGTA 58.939 50.000 0.00 0.00 0.00 3.25
2207 2739 1.422024 TGTTTAGGGCTGTGCTGGTAA 59.578 47.619 0.00 0.00 0.00 2.85
2208 2740 1.810755 GTTTAGGGCTGTGCTGGTAAC 59.189 52.381 0.00 0.00 0.00 2.50
2209 2741 0.326927 TTAGGGCTGTGCTGGTAACC 59.673 55.000 0.00 0.00 0.00 2.85
2210 2742 1.895020 TAGGGCTGTGCTGGTAACCG 61.895 60.000 0.00 0.00 0.00 4.44
2211 2743 3.431725 GGCTGTGCTGGTAACCGC 61.432 66.667 0.00 0.00 0.00 5.68
2212 2744 2.358737 GCTGTGCTGGTAACCGCT 60.359 61.111 0.00 0.00 0.00 5.52
2213 2745 1.079405 GCTGTGCTGGTAACCGCTA 60.079 57.895 0.00 0.00 0.00 4.26
2214 2746 1.084370 GCTGTGCTGGTAACCGCTAG 61.084 60.000 0.00 0.00 0.00 3.42
2215 2747 0.246635 CTGTGCTGGTAACCGCTAGT 59.753 55.000 0.00 0.00 0.00 2.57
2434 3319 3.881089 GTGGCACTTGGTTTAGTGTTAGT 59.119 43.478 11.13 0.00 45.76 2.24
2435 3320 4.337274 GTGGCACTTGGTTTAGTGTTAGTT 59.663 41.667 11.13 0.00 45.76 2.24
2436 3321 4.577283 TGGCACTTGGTTTAGTGTTAGTTC 59.423 41.667 5.75 0.00 45.76 3.01
2437 3322 4.577283 GGCACTTGGTTTAGTGTTAGTTCA 59.423 41.667 5.75 0.00 45.76 3.18
2438 3323 5.240844 GGCACTTGGTTTAGTGTTAGTTCAT 59.759 40.000 5.75 0.00 45.76 2.57
2439 3324 6.142817 GCACTTGGTTTAGTGTTAGTTCATG 58.857 40.000 5.75 0.00 45.76 3.07
2440 3325 6.238648 GCACTTGGTTTAGTGTTAGTTCATGT 60.239 38.462 5.75 0.00 45.76 3.21
2441 3326 7.681065 GCACTTGGTTTAGTGTTAGTTCATGTT 60.681 37.037 5.75 0.00 45.76 2.71
2443 3328 8.188139 ACTTGGTTTAGTGTTAGTTCATGTTTG 58.812 33.333 0.00 0.00 0.00 2.93
2444 3329 6.500041 TGGTTTAGTGTTAGTTCATGTTTGC 58.500 36.000 0.00 0.00 0.00 3.68
2445 3330 6.095580 TGGTTTAGTGTTAGTTCATGTTTGCA 59.904 34.615 0.00 0.00 0.00 4.08
2446 3331 6.416750 GGTTTAGTGTTAGTTCATGTTTGCAC 59.583 38.462 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.466555 CTCTGGTCTCCCCGTAGAGG 60.467 65.000 0.00 0.00 40.63 3.69
1 2 1.104577 GCTCTGGTCTCCCCGTAGAG 61.105 65.000 0.00 0.00 38.28 2.43
2 3 1.076923 GCTCTGGTCTCCCCGTAGA 60.077 63.158 0.00 0.00 35.15 2.59
3 4 1.076632 AGCTCTGGTCTCCCCGTAG 60.077 63.158 0.00 0.00 35.15 3.51
4 5 1.379977 CAGCTCTGGTCTCCCCGTA 60.380 63.158 0.00 0.00 35.15 4.02
5 6 2.681778 CAGCTCTGGTCTCCCCGT 60.682 66.667 0.00 0.00 35.15 5.28
6 7 3.465403 CCAGCTCTGGTCTCCCCG 61.465 72.222 7.75 0.00 45.53 5.73
15 16 1.539065 CCGCCTGTATTACCAGCTCTG 60.539 57.143 0.00 0.00 0.00 3.35
16 17 0.753262 CCGCCTGTATTACCAGCTCT 59.247 55.000 0.00 0.00 0.00 4.09
17 18 0.249911 CCCGCCTGTATTACCAGCTC 60.250 60.000 0.00 0.00 0.00 4.09
18 19 1.696097 CCCCGCCTGTATTACCAGCT 61.696 60.000 4.33 0.00 0.00 4.24
19 20 1.227853 CCCCGCCTGTATTACCAGC 60.228 63.158 0.00 0.00 0.00 4.85
20 21 1.227853 GCCCCGCCTGTATTACCAG 60.228 63.158 0.00 0.00 0.00 4.00
21 22 1.996187 TGCCCCGCCTGTATTACCA 60.996 57.895 0.00 0.00 0.00 3.25
22 23 1.525306 GTGCCCCGCCTGTATTACC 60.525 63.158 0.00 0.00 0.00 2.85
23 24 1.885850 CGTGCCCCGCCTGTATTAC 60.886 63.158 0.00 0.00 0.00 1.89
24 25 2.502093 CGTGCCCCGCCTGTATTA 59.498 61.111 0.00 0.00 0.00 0.98
25 26 4.483243 CCGTGCCCCGCCTGTATT 62.483 66.667 0.00 0.00 34.38 1.89
33 34 3.929334 TTTTGGGATCCGTGCCCCG 62.929 63.158 5.45 0.00 45.40 5.73
34 35 2.036572 TTTTGGGATCCGTGCCCC 59.963 61.111 5.45 0.00 45.40 5.80
35 36 2.710902 GCTTTTGGGATCCGTGCCC 61.711 63.158 5.45 0.00 46.22 5.36
36 37 1.322538 ATGCTTTTGGGATCCGTGCC 61.323 55.000 5.45 0.00 36.16 5.01
37 38 0.532115 AATGCTTTTGGGATCCGTGC 59.468 50.000 5.45 5.94 0.00 5.34
38 39 1.818060 TGAATGCTTTTGGGATCCGTG 59.182 47.619 5.45 0.00 0.00 4.94
39 40 2.214376 TGAATGCTTTTGGGATCCGT 57.786 45.000 5.45 0.00 0.00 4.69
40 41 3.056607 AGTTTGAATGCTTTTGGGATCCG 60.057 43.478 5.45 0.00 0.00 4.18
41 42 4.541973 AGTTTGAATGCTTTTGGGATCC 57.458 40.909 1.92 1.92 0.00 3.36
42 43 8.445493 CAAATAAGTTTGAATGCTTTTGGGATC 58.555 33.333 0.00 0.00 46.03 3.36
43 44 7.391275 CCAAATAAGTTTGAATGCTTTTGGGAT 59.609 33.333 2.67 0.00 46.03 3.85
44 45 6.709846 CCAAATAAGTTTGAATGCTTTTGGGA 59.290 34.615 2.67 0.00 46.03 4.37
45 46 6.486320 ACCAAATAAGTTTGAATGCTTTTGGG 59.514 34.615 13.74 0.00 46.03 4.12
46 47 7.226325 TGACCAAATAAGTTTGAATGCTTTTGG 59.774 33.333 9.00 9.00 46.03 3.28
47 48 8.140677 TGACCAAATAAGTTTGAATGCTTTTG 57.859 30.769 2.67 0.00 46.03 2.44
48 49 8.729805 TTGACCAAATAAGTTTGAATGCTTTT 57.270 26.923 2.67 0.00 46.03 2.27
49 50 8.203485 TCTTGACCAAATAAGTTTGAATGCTTT 58.797 29.630 2.67 0.00 46.03 3.51
50 51 7.725251 TCTTGACCAAATAAGTTTGAATGCTT 58.275 30.769 2.67 0.00 46.03 3.91
51 52 7.288810 TCTTGACCAAATAAGTTTGAATGCT 57.711 32.000 2.67 0.00 46.03 3.79
52 53 7.599998 ACATCTTGACCAAATAAGTTTGAATGC 59.400 33.333 2.67 0.00 46.03 3.56
53 54 8.918658 CACATCTTGACCAAATAAGTTTGAATG 58.081 33.333 2.67 0.00 46.03 2.67
54 55 7.599998 GCACATCTTGACCAAATAAGTTTGAAT 59.400 33.333 2.67 0.00 46.03 2.57
55 56 6.922957 GCACATCTTGACCAAATAAGTTTGAA 59.077 34.615 2.67 0.00 46.03 2.69
56 57 6.040278 TGCACATCTTGACCAAATAAGTTTGA 59.960 34.615 2.67 0.00 46.03 2.69
57 58 6.215121 TGCACATCTTGACCAAATAAGTTTG 58.785 36.000 0.00 0.00 43.43 2.93
58 59 6.403866 TGCACATCTTGACCAAATAAGTTT 57.596 33.333 0.00 0.00 0.00 2.66
59 60 6.403866 TTGCACATCTTGACCAAATAAGTT 57.596 33.333 0.00 0.00 0.00 2.66
60 61 6.403866 TTTGCACATCTTGACCAAATAAGT 57.596 33.333 0.00 0.00 0.00 2.24
61 62 7.599621 TCAATTTGCACATCTTGACCAAATAAG 59.400 33.333 0.00 0.00 33.85 1.73
62 63 7.440198 TCAATTTGCACATCTTGACCAAATAA 58.560 30.769 0.00 0.00 33.85 1.40
63 64 6.990798 TCAATTTGCACATCTTGACCAAATA 58.009 32.000 0.00 0.00 33.85 1.40
64 65 5.856156 TCAATTTGCACATCTTGACCAAAT 58.144 33.333 0.00 0.00 35.18 2.32
65 66 5.163426 ACTCAATTTGCACATCTTGACCAAA 60.163 36.000 0.00 0.00 0.00 3.28
66 67 4.341806 ACTCAATTTGCACATCTTGACCAA 59.658 37.500 0.00 0.00 0.00 3.67
67 68 3.890756 ACTCAATTTGCACATCTTGACCA 59.109 39.130 0.00 0.00 0.00 4.02
68 69 4.510038 ACTCAATTTGCACATCTTGACC 57.490 40.909 0.00 0.00 0.00 4.02
69 70 6.000891 TGTACTCAATTTGCACATCTTGAC 57.999 37.500 0.00 0.00 0.00 3.18
70 71 6.822667 ATGTACTCAATTTGCACATCTTGA 57.177 33.333 0.00 0.00 0.00 3.02
71 72 7.878477 AAATGTACTCAATTTGCACATCTTG 57.122 32.000 9.87 0.00 0.00 3.02
72 73 8.767085 CAAAAATGTACTCAATTTGCACATCTT 58.233 29.630 9.87 3.14 32.25 2.40
73 74 8.143193 TCAAAAATGTACTCAATTTGCACATCT 58.857 29.630 9.87 0.00 35.91 2.90
74 75 8.216453 GTCAAAAATGTACTCAATTTGCACATC 58.784 33.333 9.87 0.00 35.91 3.06
75 76 7.171337 GGTCAAAAATGTACTCAATTTGCACAT 59.829 33.333 0.00 0.00 35.91 3.21
76 77 6.478344 GGTCAAAAATGTACTCAATTTGCACA 59.522 34.615 0.00 0.00 35.91 4.57
77 78 6.701400 AGGTCAAAAATGTACTCAATTTGCAC 59.299 34.615 0.00 2.62 35.91 4.57
78 79 6.700960 CAGGTCAAAAATGTACTCAATTTGCA 59.299 34.615 0.00 0.00 35.91 4.08
79 80 6.701400 ACAGGTCAAAAATGTACTCAATTTGC 59.299 34.615 0.00 0.00 35.91 3.68
80 81 7.169645 CCACAGGTCAAAAATGTACTCAATTTG 59.830 37.037 0.00 1.55 36.58 2.32
81 82 7.069331 TCCACAGGTCAAAAATGTACTCAATTT 59.931 33.333 0.00 0.00 0.00 1.82
82 83 6.549364 TCCACAGGTCAAAAATGTACTCAATT 59.451 34.615 0.00 0.00 0.00 2.32
83 84 6.016276 GTCCACAGGTCAAAAATGTACTCAAT 60.016 38.462 0.00 0.00 0.00 2.57
84 85 5.298276 GTCCACAGGTCAAAAATGTACTCAA 59.702 40.000 0.00 0.00 0.00 3.02
85 86 4.819630 GTCCACAGGTCAAAAATGTACTCA 59.180 41.667 0.00 0.00 0.00 3.41
86 87 4.084013 CGTCCACAGGTCAAAAATGTACTC 60.084 45.833 0.00 0.00 0.00 2.59
87 88 3.813166 CGTCCACAGGTCAAAAATGTACT 59.187 43.478 0.00 0.00 0.00 2.73
88 89 3.810941 TCGTCCACAGGTCAAAAATGTAC 59.189 43.478 0.00 0.00 0.00 2.90
89 90 4.074627 TCGTCCACAGGTCAAAAATGTA 57.925 40.909 0.00 0.00 0.00 2.29
90 91 2.925724 TCGTCCACAGGTCAAAAATGT 58.074 42.857 0.00 0.00 0.00 2.71
91 92 3.980646 TTCGTCCACAGGTCAAAAATG 57.019 42.857 0.00 0.00 0.00 2.32
92 93 4.582656 TGATTTCGTCCACAGGTCAAAAAT 59.417 37.500 0.00 0.00 0.00 1.82
93 94 3.948473 TGATTTCGTCCACAGGTCAAAAA 59.052 39.130 0.00 0.00 0.00 1.94
94 95 3.546724 TGATTTCGTCCACAGGTCAAAA 58.453 40.909 0.00 0.00 0.00 2.44
95 96 3.201353 TGATTTCGTCCACAGGTCAAA 57.799 42.857 0.00 0.00 0.00 2.69
96 97 2.920724 TGATTTCGTCCACAGGTCAA 57.079 45.000 0.00 0.00 0.00 3.18
97 98 2.920724 TTGATTTCGTCCACAGGTCA 57.079 45.000 0.00 0.00 0.00 4.02
98 99 3.751175 TGATTTGATTTCGTCCACAGGTC 59.249 43.478 0.00 0.00 0.00 3.85
99 100 3.502211 GTGATTTGATTTCGTCCACAGGT 59.498 43.478 0.00 0.00 0.00 4.00
100 101 3.424829 CGTGATTTGATTTCGTCCACAGG 60.425 47.826 0.00 0.00 0.00 4.00
101 102 3.431912 TCGTGATTTGATTTCGTCCACAG 59.568 43.478 0.00 0.00 0.00 3.66
102 103 3.394719 TCGTGATTTGATTTCGTCCACA 58.605 40.909 0.00 0.00 0.00 4.17
103 104 4.600012 ATCGTGATTTGATTTCGTCCAC 57.400 40.909 0.00 0.00 0.00 4.02
104 105 5.621197 AAATCGTGATTTGATTTCGTCCA 57.379 34.783 7.02 0.00 41.00 4.02
115 116 8.472683 TTCAAAAACAGTTCAAATCGTGATTT 57.527 26.923 2.04 2.04 41.33 2.17
116 117 8.472683 TTTCAAAAACAGTTCAAATCGTGATT 57.527 26.923 0.00 0.00 35.70 2.57
117 118 8.472683 TTTTCAAAAACAGTTCAAATCGTGAT 57.527 26.923 0.00 0.00 35.70 3.06
118 119 7.875316 TTTTCAAAAACAGTTCAAATCGTGA 57.125 28.000 0.00 0.00 0.00 4.35
142 143 8.203485 ACACAAAATGGTCAGTATGTGATTTTT 58.797 29.630 10.34 0.00 40.32 1.94
143 144 7.652909 CACACAAAATGGTCAGTATGTGATTTT 59.347 33.333 10.34 0.00 40.32 1.82
144 145 7.147312 CACACAAAATGGTCAGTATGTGATTT 58.853 34.615 10.34 0.00 40.32 2.17
145 146 6.294675 CCACACAAAATGGTCAGTATGTGATT 60.295 38.462 10.34 0.00 40.32 2.57
146 147 5.183713 CCACACAAAATGGTCAGTATGTGAT 59.816 40.000 10.34 0.00 40.32 3.06
147 148 4.518590 CCACACAAAATGGTCAGTATGTGA 59.481 41.667 10.34 0.00 40.32 3.58
148 149 4.797471 CCACACAAAATGGTCAGTATGTG 58.203 43.478 0.00 0.00 42.78 3.21
149 150 3.255642 GCCACACAAAATGGTCAGTATGT 59.744 43.478 0.00 0.00 39.63 2.29
150 151 3.670359 CGCCACACAAAATGGTCAGTATG 60.670 47.826 0.00 0.00 39.63 2.39
151 152 2.487762 CGCCACACAAAATGGTCAGTAT 59.512 45.455 0.00 0.00 39.63 2.12
152 153 1.876799 CGCCACACAAAATGGTCAGTA 59.123 47.619 0.00 0.00 39.63 2.74
153 154 0.667993 CGCCACACAAAATGGTCAGT 59.332 50.000 0.00 0.00 39.63 3.41
154 155 0.667993 ACGCCACACAAAATGGTCAG 59.332 50.000 0.00 0.00 39.63 3.51
155 156 0.665835 GACGCCACACAAAATGGTCA 59.334 50.000 0.00 0.00 39.63 4.02
156 157 0.039527 GGACGCCACACAAAATGGTC 60.040 55.000 0.00 0.00 39.63 4.02
157 158 1.791103 CGGACGCCACACAAAATGGT 61.791 55.000 0.00 0.00 39.63 3.55
158 159 1.081509 CGGACGCCACACAAAATGG 60.082 57.895 0.00 0.00 40.50 3.16
159 160 0.385473 GTCGGACGCCACACAAAATG 60.385 55.000 0.00 0.00 0.00 2.32
160 161 0.816018 TGTCGGACGCCACACAAAAT 60.816 50.000 3.34 0.00 0.00 1.82
161 162 1.433053 CTGTCGGACGCCACACAAAA 61.433 55.000 3.34 0.00 0.00 2.44
162 163 1.885388 CTGTCGGACGCCACACAAA 60.885 57.895 3.34 0.00 0.00 2.83
163 164 2.279851 CTGTCGGACGCCACACAA 60.280 61.111 3.34 0.00 0.00 3.33
164 165 4.961511 GCTGTCGGACGCCACACA 62.962 66.667 11.98 0.00 0.00 3.72
180 181 4.687215 TGGAGTGCAGCGTCTGGC 62.687 66.667 8.57 2.87 44.05 4.85
181 182 1.877576 TAGTGGAGTGCAGCGTCTGG 61.878 60.000 8.57 0.00 31.21 3.86
182 183 0.174389 ATAGTGGAGTGCAGCGTCTG 59.826 55.000 0.00 2.92 34.12 3.51
183 184 0.174389 CATAGTGGAGTGCAGCGTCT 59.826 55.000 0.00 0.00 0.00 4.18
184 185 1.424493 GCATAGTGGAGTGCAGCGTC 61.424 60.000 0.00 0.00 40.94 5.19
185 186 1.448540 GCATAGTGGAGTGCAGCGT 60.449 57.895 0.00 0.00 40.94 5.07
186 187 1.448365 TGCATAGTGGAGTGCAGCG 60.448 57.895 0.00 0.00 45.60 5.18
187 188 4.623814 TGCATAGTGGAGTGCAGC 57.376 55.556 0.00 0.00 45.60 5.25
190 191 1.425428 GCGTTGCATAGTGGAGTGC 59.575 57.895 0.00 0.00 41.61 4.40
191 192 0.391661 AGGCGTTGCATAGTGGAGTG 60.392 55.000 0.00 0.00 0.00 3.51
192 193 0.324943 AAGGCGTTGCATAGTGGAGT 59.675 50.000 0.00 0.00 0.00 3.85
193 194 1.131126 CAAAGGCGTTGCATAGTGGAG 59.869 52.381 0.00 0.00 0.00 3.86
194 195 1.164411 CAAAGGCGTTGCATAGTGGA 58.836 50.000 0.00 0.00 0.00 4.02
195 196 1.135689 GTCAAAGGCGTTGCATAGTGG 60.136 52.381 8.36 0.00 37.13 4.00
196 197 1.806542 AGTCAAAGGCGTTGCATAGTG 59.193 47.619 8.36 0.00 37.13 2.74
197 198 2.185004 AGTCAAAGGCGTTGCATAGT 57.815 45.000 8.36 0.00 37.13 2.12
198 199 3.063997 CCTAAGTCAAAGGCGTTGCATAG 59.936 47.826 8.36 9.64 37.13 2.23
199 200 3.006940 CCTAAGTCAAAGGCGTTGCATA 58.993 45.455 8.36 1.34 37.13 3.14
200 201 1.812571 CCTAAGTCAAAGGCGTTGCAT 59.187 47.619 8.36 0.25 37.13 3.96
201 202 1.234821 CCTAAGTCAAAGGCGTTGCA 58.765 50.000 8.36 0.00 37.13 4.08
259 260 4.389576 GCTGGTTGTTGCGCCTCG 62.390 66.667 4.18 0.00 0.00 4.63
260 261 4.043200 GGCTGGTTGTTGCGCCTC 62.043 66.667 4.18 0.00 39.42 4.70
263 264 4.980903 CACGGCTGGTTGTTGCGC 62.981 66.667 0.00 0.00 0.00 6.09
264 265 4.980903 GCACGGCTGGTTGTTGCG 62.981 66.667 0.00 0.00 0.00 4.85
265 266 3.829272 CTGCACGGCTGGTTGTTGC 62.829 63.158 0.00 0.00 0.00 4.17
266 267 2.332514 CTGCACGGCTGGTTGTTG 59.667 61.111 0.00 0.00 0.00 3.33
267 268 3.595758 GCTGCACGGCTGGTTGTT 61.596 61.111 0.00 0.00 0.00 2.83
287 288 1.084370 GTGTGGTGCCTAGCGCTTAG 61.084 60.000 18.68 8.90 39.23 2.18
288 289 1.079405 GTGTGGTGCCTAGCGCTTA 60.079 57.895 18.68 0.00 39.23 3.09
289 290 2.358737 GTGTGGTGCCTAGCGCTT 60.359 61.111 18.68 0.00 39.23 4.68
290 291 3.596066 CTGTGTGGTGCCTAGCGCT 62.596 63.158 17.26 17.26 39.23 5.92
291 292 3.121030 CTGTGTGGTGCCTAGCGC 61.121 66.667 0.00 0.00 38.45 5.92
292 293 2.029288 CACTGTGTGGTGCCTAGCG 61.029 63.158 0.00 0.00 0.00 4.26
293 294 0.320374 TACACTGTGTGGTGCCTAGC 59.680 55.000 22.97 0.00 40.52 3.42
294 295 2.831685 TTACACTGTGTGGTGCCTAG 57.168 50.000 22.97 0.00 40.52 3.02
295 296 2.370519 ACATTACACTGTGTGGTGCCTA 59.629 45.455 22.97 0.00 40.52 3.93
296 297 1.142870 ACATTACACTGTGTGGTGCCT 59.857 47.619 22.97 4.58 40.52 4.75
297 298 1.266718 CACATTACACTGTGTGGTGCC 59.733 52.381 22.97 0.00 41.46 5.01
298 299 1.334960 GCACATTACACTGTGTGGTGC 60.335 52.381 31.52 31.52 46.59 5.01
299 300 1.946081 TGCACATTACACTGTGTGGTG 59.054 47.619 22.97 24.18 46.59 4.17
300 301 2.340210 TGCACATTACACTGTGTGGT 57.660 45.000 22.97 14.77 46.59 4.16
301 302 2.601979 CGTTGCACATTACACTGTGTGG 60.602 50.000 22.97 14.17 46.59 4.17
302 303 2.638673 CGTTGCACATTACACTGTGTG 58.361 47.619 22.97 9.35 46.59 3.82
303 304 1.002900 GCGTTGCACATTACACTGTGT 60.003 47.619 18.51 18.51 46.59 3.72
305 306 0.591170 GGCGTTGCACATTACACTGT 59.409 50.000 0.00 0.00 0.00 3.55
306 307 0.874390 AGGCGTTGCACATTACACTG 59.126 50.000 0.00 0.00 0.00 3.66
307 308 2.346803 CTAGGCGTTGCACATTACACT 58.653 47.619 0.00 0.00 0.00 3.55
308 309 1.202031 GCTAGGCGTTGCACATTACAC 60.202 52.381 7.96 0.00 0.00 2.90
309 310 1.083489 GCTAGGCGTTGCACATTACA 58.917 50.000 7.96 0.00 0.00 2.41
310 311 3.897819 GCTAGGCGTTGCACATTAC 57.102 52.632 7.96 0.00 0.00 1.89
329 330 2.711924 GATGTGCAGCGCCTAAGC 59.288 61.111 2.29 3.99 37.41 3.09
330 331 1.519234 TCGATGTGCAGCGCCTAAG 60.519 57.895 2.29 0.00 40.42 2.18
331 332 1.809619 GTCGATGTGCAGCGCCTAA 60.810 57.895 2.29 0.00 40.42 2.69
332 333 2.202743 GTCGATGTGCAGCGCCTA 60.203 61.111 2.29 0.00 40.42 3.93
333 334 2.225791 TAAGTCGATGTGCAGCGCCT 62.226 55.000 2.29 0.00 40.42 5.52
334 335 1.809619 TAAGTCGATGTGCAGCGCC 60.810 57.895 2.29 0.00 40.42 6.53
335 336 1.345176 GTAAGTCGATGTGCAGCGC 59.655 57.895 0.00 0.00 40.42 5.92
336 337 1.625870 CGTAAGTCGATGTGCAGCG 59.374 57.895 3.25 3.25 42.86 5.18
337 338 1.345176 GCGTAAGTCGATGTGCAGC 59.655 57.895 0.00 0.00 42.86 5.25
338 339 1.999051 GGCGTAAGTCGATGTGCAG 59.001 57.895 0.00 0.00 42.86 4.41
339 340 4.178861 GGCGTAAGTCGATGTGCA 57.821 55.556 0.00 0.00 42.86 4.57
369 370 1.793820 AAAGAACTGCCTGGGGAGGG 61.794 60.000 12.54 0.00 37.92 4.30
370 371 0.322906 GAAAGAACTGCCTGGGGAGG 60.323 60.000 12.54 0.00 37.92 4.30
371 372 0.322906 GGAAAGAACTGCCTGGGGAG 60.323 60.000 6.60 6.60 39.56 4.30
372 373 0.772124 AGGAAAGAACTGCCTGGGGA 60.772 55.000 0.00 0.00 0.00 4.81
373 374 0.322906 GAGGAAAGAACTGCCTGGGG 60.323 60.000 0.00 0.00 30.70 4.96
374 375 0.695347 AGAGGAAAGAACTGCCTGGG 59.305 55.000 0.00 0.00 30.70 4.45
375 376 1.339535 GGAGAGGAAAGAACTGCCTGG 60.340 57.143 0.00 0.00 30.70 4.45
376 377 1.339535 GGGAGAGGAAAGAACTGCCTG 60.340 57.143 0.00 0.00 38.72 4.85
377 378 0.988063 GGGAGAGGAAAGAACTGCCT 59.012 55.000 0.00 0.00 38.72 4.75
378 379 0.693049 TGGGAGAGGAAAGAACTGCC 59.307 55.000 0.00 0.00 41.40 4.85
379 380 1.349357 ACTGGGAGAGGAAAGAACTGC 59.651 52.381 0.00 0.00 0.00 4.40
380 381 2.634940 TGACTGGGAGAGGAAAGAACTG 59.365 50.000 0.00 0.00 0.00 3.16
381 382 2.903135 CTGACTGGGAGAGGAAAGAACT 59.097 50.000 0.00 0.00 0.00 3.01
382 383 2.635427 ACTGACTGGGAGAGGAAAGAAC 59.365 50.000 0.00 0.00 0.00 3.01
383 384 2.977808 ACTGACTGGGAGAGGAAAGAA 58.022 47.619 0.00 0.00 0.00 2.52
384 385 2.704190 ACTGACTGGGAGAGGAAAGA 57.296 50.000 0.00 0.00 0.00 2.52
385 386 2.027653 GGAACTGACTGGGAGAGGAAAG 60.028 54.545 0.00 0.00 0.00 2.62
386 387 1.978580 GGAACTGACTGGGAGAGGAAA 59.021 52.381 0.00 0.00 0.00 3.13
387 388 1.150135 AGGAACTGACTGGGAGAGGAA 59.850 52.381 0.00 0.00 37.18 3.36
388 389 0.787084 AGGAACTGACTGGGAGAGGA 59.213 55.000 0.00 0.00 37.18 3.71
389 390 1.190643 GAGGAACTGACTGGGAGAGG 58.809 60.000 0.00 0.00 41.55 3.69
390 391 2.099405 GAGAGGAACTGACTGGGAGAG 58.901 57.143 0.00 0.00 41.55 3.20
391 392 1.713647 AGAGAGGAACTGACTGGGAGA 59.286 52.381 0.00 0.00 41.55 3.71
392 393 2.230130 AGAGAGGAACTGACTGGGAG 57.770 55.000 0.00 0.00 41.55 4.30
393 394 5.467668 TTATAGAGAGGAACTGACTGGGA 57.532 43.478 0.00 0.00 41.55 4.37
394 395 5.422331 TGTTTATAGAGAGGAACTGACTGGG 59.578 44.000 0.00 0.00 41.55 4.45
395 396 6.378564 TCTGTTTATAGAGAGGAACTGACTGG 59.621 42.308 0.00 0.00 41.55 4.00
396 397 7.338196 TCTCTGTTTATAGAGAGGAACTGACTG 59.662 40.741 7.37 0.00 46.12 3.51
397 398 7.406916 TCTCTGTTTATAGAGAGGAACTGACT 58.593 38.462 7.37 0.00 46.12 3.41
398 399 7.633193 TCTCTGTTTATAGAGAGGAACTGAC 57.367 40.000 7.37 0.00 46.12 3.51
408 409 3.305064 GCCGCTCCTCTCTGTTTATAGAG 60.305 52.174 0.00 0.00 44.42 2.43
409 410 2.623889 GCCGCTCCTCTCTGTTTATAGA 59.376 50.000 0.00 0.00 0.00 1.98
410 411 2.605823 CGCCGCTCCTCTCTGTTTATAG 60.606 54.545 0.00 0.00 0.00 1.31
411 412 1.337071 CGCCGCTCCTCTCTGTTTATA 59.663 52.381 0.00 0.00 0.00 0.98
412 413 0.103208 CGCCGCTCCTCTCTGTTTAT 59.897 55.000 0.00 0.00 0.00 1.40
413 414 1.511305 CGCCGCTCCTCTCTGTTTA 59.489 57.895 0.00 0.00 0.00 2.01
414 415 2.262915 CGCCGCTCCTCTCTGTTT 59.737 61.111 0.00 0.00 0.00 2.83
415 416 3.764466 CCGCCGCTCCTCTCTGTT 61.764 66.667 0.00 0.00 0.00 3.16
433 434 3.537206 GAGGGATCCGAATGGGGCG 62.537 68.421 5.45 0.00 36.01 6.13
434 435 2.432123 GAGGGATCCGAATGGGGC 59.568 66.667 5.45 0.00 36.01 5.80
435 436 2.529744 GGGAGGGATCCGAATGGGG 61.530 68.421 5.45 0.00 36.01 4.96
436 437 1.770110 TGGGAGGGATCCGAATGGG 60.770 63.158 5.45 0.00 35.24 4.00
437 438 1.344953 TGTGGGAGGGATCCGAATGG 61.345 60.000 5.45 0.00 0.00 3.16
438 439 0.179045 GTGTGGGAGGGATCCGAATG 60.179 60.000 5.45 0.00 0.00 2.67
439 440 1.345715 GGTGTGGGAGGGATCCGAAT 61.346 60.000 5.45 0.00 0.00 3.34
440 441 1.993391 GGTGTGGGAGGGATCCGAA 60.993 63.158 5.45 0.00 0.00 4.30
441 442 2.365105 GGTGTGGGAGGGATCCGA 60.365 66.667 5.45 0.00 0.00 4.55
442 443 3.480133 GGGTGTGGGAGGGATCCG 61.480 72.222 5.45 0.00 0.00 4.18
443 444 3.097162 GGGGTGTGGGAGGGATCC 61.097 72.222 1.92 1.92 0.00 3.36
444 445 2.042930 AGGGGTGTGGGAGGGATC 59.957 66.667 0.00 0.00 0.00 3.36
445 446 2.042930 GAGGGGTGTGGGAGGGAT 59.957 66.667 0.00 0.00 0.00 3.85
446 447 3.208592 AGAGGGGTGTGGGAGGGA 61.209 66.667 0.00 0.00 0.00 4.20
447 448 2.689034 GAGAGGGGTGTGGGAGGG 60.689 72.222 0.00 0.00 0.00 4.30
448 449 1.992277 CTGAGAGGGGTGTGGGAGG 60.992 68.421 0.00 0.00 0.00 4.30
449 450 0.326048 ATCTGAGAGGGGTGTGGGAG 60.326 60.000 0.00 0.00 0.00 4.30
450 451 0.325671 GATCTGAGAGGGGTGTGGGA 60.326 60.000 0.00 0.00 0.00 4.37
451 452 0.326048 AGATCTGAGAGGGGTGTGGG 60.326 60.000 0.00 0.00 0.00 4.61
452 453 0.829333 CAGATCTGAGAGGGGTGTGG 59.171 60.000 18.34 0.00 0.00 4.17
453 454 1.857965 TCAGATCTGAGAGGGGTGTG 58.142 55.000 21.67 0.00 34.14 3.82
454 455 2.043664 TCTTCAGATCTGAGAGGGGTGT 59.956 50.000 23.92 0.00 41.13 4.16
455 456 2.744760 TCTTCAGATCTGAGAGGGGTG 58.255 52.381 23.92 10.45 41.13 4.61
456 457 3.704545 ATCTTCAGATCTGAGAGGGGT 57.295 47.619 23.92 10.45 41.13 4.95
457 458 5.370875 AAAATCTTCAGATCTGAGAGGGG 57.629 43.478 23.92 13.38 41.13 4.79
458 459 5.990996 GCTAAAATCTTCAGATCTGAGAGGG 59.009 44.000 23.92 15.50 41.13 4.30
459 460 5.990996 GGCTAAAATCTTCAGATCTGAGAGG 59.009 44.000 23.92 17.64 41.13 3.69
460 461 5.691305 CGGCTAAAATCTTCAGATCTGAGAG 59.309 44.000 23.92 21.71 41.13 3.20
461 462 5.127845 ACGGCTAAAATCTTCAGATCTGAGA 59.872 40.000 23.92 21.73 41.13 3.27
462 463 5.233902 CACGGCTAAAATCTTCAGATCTGAG 59.766 44.000 23.92 17.81 41.13 3.35
463 464 5.111989 CACGGCTAAAATCTTCAGATCTGA 58.888 41.667 21.67 21.67 37.91 3.27
464 465 4.272018 CCACGGCTAAAATCTTCAGATCTG 59.728 45.833 17.07 17.07 32.75 2.90
465 466 4.162320 TCCACGGCTAAAATCTTCAGATCT 59.838 41.667 0.00 0.00 32.75 2.75
466 467 4.442706 TCCACGGCTAAAATCTTCAGATC 58.557 43.478 0.00 0.00 32.75 2.75
467 468 4.487714 TCCACGGCTAAAATCTTCAGAT 57.512 40.909 0.00 0.00 36.07 2.90
468 469 3.973206 TCCACGGCTAAAATCTTCAGA 57.027 42.857 0.00 0.00 0.00 3.27
469 470 4.260375 CGAATCCACGGCTAAAATCTTCAG 60.260 45.833 0.00 0.00 0.00 3.02
470 471 3.621268 CGAATCCACGGCTAAAATCTTCA 59.379 43.478 0.00 0.00 0.00 3.02
471 472 3.869246 TCGAATCCACGGCTAAAATCTTC 59.131 43.478 0.00 0.00 0.00 2.87
472 473 3.869065 TCGAATCCACGGCTAAAATCTT 58.131 40.909 0.00 0.00 0.00 2.40
473 474 3.536956 TCGAATCCACGGCTAAAATCT 57.463 42.857 0.00 0.00 0.00 2.40
474 475 4.058817 AGATCGAATCCACGGCTAAAATC 58.941 43.478 0.00 0.00 0.00 2.17
475 476 4.058817 GAGATCGAATCCACGGCTAAAAT 58.941 43.478 0.00 0.00 0.00 1.82
476 477 3.454375 GAGATCGAATCCACGGCTAAAA 58.546 45.455 0.00 0.00 0.00 1.52
477 478 2.223971 GGAGATCGAATCCACGGCTAAA 60.224 50.000 13.65 0.00 36.79 1.85
478 479 1.340248 GGAGATCGAATCCACGGCTAA 59.660 52.381 13.65 0.00 36.79 3.09
479 480 0.959553 GGAGATCGAATCCACGGCTA 59.040 55.000 13.65 0.00 36.79 3.93
480 481 1.043116 TGGAGATCGAATCCACGGCT 61.043 55.000 16.51 0.00 41.96 5.52
481 482 0.179084 TTGGAGATCGAATCCACGGC 60.179 55.000 19.33 0.00 46.46 5.68
482 483 2.408050 GATTGGAGATCGAATCCACGG 58.592 52.381 19.33 0.00 46.46 4.94
487 488 2.903135 AGGAGGGATTGGAGATCGAATC 59.097 50.000 8.56 8.56 39.41 2.52
488 489 2.983296 AGGAGGGATTGGAGATCGAAT 58.017 47.619 0.00 0.00 0.00 3.34
489 490 2.478872 AGGAGGGATTGGAGATCGAA 57.521 50.000 0.00 0.00 0.00 3.71
490 491 2.447429 AGTAGGAGGGATTGGAGATCGA 59.553 50.000 0.00 0.00 0.00 3.59
491 492 2.883026 AGTAGGAGGGATTGGAGATCG 58.117 52.381 0.00 0.00 0.00 3.69
492 493 4.202738 ACCTAGTAGGAGGGATTGGAGATC 60.203 50.000 23.50 0.00 41.36 2.75
493 494 3.735442 ACCTAGTAGGAGGGATTGGAGAT 59.265 47.826 23.50 0.00 41.36 2.75
494 495 3.140143 ACCTAGTAGGAGGGATTGGAGA 58.860 50.000 23.50 0.00 41.36 3.71
495 496 3.621682 ACCTAGTAGGAGGGATTGGAG 57.378 52.381 23.50 0.00 41.36 3.86
496 497 5.042827 AGTTTACCTAGTAGGAGGGATTGGA 60.043 44.000 23.50 0.00 41.36 3.53
497 498 5.217400 AGTTTACCTAGTAGGAGGGATTGG 58.783 45.833 23.50 0.00 41.36 3.16
498 499 5.304871 GGAGTTTACCTAGTAGGAGGGATTG 59.695 48.000 23.50 0.00 41.36 2.67
499 500 5.198219 AGGAGTTTACCTAGTAGGAGGGATT 59.802 44.000 23.50 1.44 41.36 3.01
500 501 4.738132 AGGAGTTTACCTAGTAGGAGGGAT 59.262 45.833 23.50 5.52 41.36 3.85
501 502 4.125282 AGGAGTTTACCTAGTAGGAGGGA 58.875 47.826 23.50 2.97 41.36 4.20
502 503 4.472496 GAGGAGTTTACCTAGTAGGAGGG 58.528 52.174 23.50 0.00 41.36 4.30
503 504 4.472496 GGAGGAGTTTACCTAGTAGGAGG 58.528 52.174 23.50 0.00 40.73 4.30
504 505 4.136051 CGGAGGAGTTTACCTAGTAGGAG 58.864 52.174 23.50 0.00 40.73 3.69
505 506 3.525199 ACGGAGGAGTTTACCTAGTAGGA 59.475 47.826 23.50 3.77 40.73 2.94
506 507 3.895998 ACGGAGGAGTTTACCTAGTAGG 58.104 50.000 15.09 15.09 40.73 3.18
507 508 4.337836 GGAACGGAGGAGTTTACCTAGTAG 59.662 50.000 0.00 0.00 40.73 2.57
508 509 4.273318 GGAACGGAGGAGTTTACCTAGTA 58.727 47.826 0.00 0.00 40.73 1.82
509 510 3.095332 GGAACGGAGGAGTTTACCTAGT 58.905 50.000 0.00 0.00 40.73 2.57
510 511 2.429971 GGGAACGGAGGAGTTTACCTAG 59.570 54.545 0.00 0.00 40.73 3.02
511 512 2.043526 AGGGAACGGAGGAGTTTACCTA 59.956 50.000 0.00 0.00 40.73 3.08
512 513 1.203275 AGGGAACGGAGGAGTTTACCT 60.203 52.381 0.00 0.00 43.64 3.08
513 514 1.273759 AGGGAACGGAGGAGTTTACC 58.726 55.000 0.00 0.00 34.00 2.85
514 515 2.566279 AGAAGGGAACGGAGGAGTTTAC 59.434 50.000 0.00 0.00 34.00 2.01
515 516 2.898662 AGAAGGGAACGGAGGAGTTTA 58.101 47.619 0.00 0.00 34.00 2.01
516 517 1.730851 AGAAGGGAACGGAGGAGTTT 58.269 50.000 0.00 0.00 34.00 2.66
517 518 1.730851 AAGAAGGGAACGGAGGAGTT 58.269 50.000 0.00 0.00 36.99 3.01
518 519 1.730851 AAAGAAGGGAACGGAGGAGT 58.269 50.000 0.00 0.00 0.00 3.85
519 520 2.615747 GGAAAAGAAGGGAACGGAGGAG 60.616 54.545 0.00 0.00 0.00 3.69
520 521 1.350019 GGAAAAGAAGGGAACGGAGGA 59.650 52.381 0.00 0.00 0.00 3.71
521 522 1.351350 AGGAAAAGAAGGGAACGGAGG 59.649 52.381 0.00 0.00 0.00 4.30
522 523 2.038557 TGAGGAAAAGAAGGGAACGGAG 59.961 50.000 0.00 0.00 0.00 4.63
523 524 2.038557 CTGAGGAAAAGAAGGGAACGGA 59.961 50.000 0.00 0.00 0.00 4.69
524 525 2.224548 ACTGAGGAAAAGAAGGGAACGG 60.225 50.000 0.00 0.00 0.00 4.44
525 526 3.127425 ACTGAGGAAAAGAAGGGAACG 57.873 47.619 0.00 0.00 0.00 3.95
526 527 7.526142 AATTTACTGAGGAAAAGAAGGGAAC 57.474 36.000 0.00 0.00 0.00 3.62
527 528 6.430000 CGAATTTACTGAGGAAAAGAAGGGAA 59.570 38.462 0.00 0.00 0.00 3.97
528 529 5.938125 CGAATTTACTGAGGAAAAGAAGGGA 59.062 40.000 0.00 0.00 0.00 4.20
529 530 5.705905 ACGAATTTACTGAGGAAAAGAAGGG 59.294 40.000 0.00 0.00 0.00 3.95
530 531 6.803154 ACGAATTTACTGAGGAAAAGAAGG 57.197 37.500 0.00 0.00 0.00 3.46
531 532 7.639945 ACAACGAATTTACTGAGGAAAAGAAG 58.360 34.615 0.00 0.00 0.00 2.85
532 533 7.281324 TGACAACGAATTTACTGAGGAAAAGAA 59.719 33.333 0.00 0.00 0.00 2.52
533 534 6.764085 TGACAACGAATTTACTGAGGAAAAGA 59.236 34.615 0.00 0.00 0.00 2.52
534 535 6.954944 TGACAACGAATTTACTGAGGAAAAG 58.045 36.000 0.00 0.00 0.00 2.27
535 536 6.928979 TGACAACGAATTTACTGAGGAAAA 57.071 33.333 0.00 0.00 0.00 2.29
536 537 7.504924 AATGACAACGAATTTACTGAGGAAA 57.495 32.000 0.00 0.00 0.00 3.13
537 538 7.504924 AAATGACAACGAATTTACTGAGGAA 57.495 32.000 0.00 0.00 0.00 3.36
538 539 7.504924 AAAATGACAACGAATTTACTGAGGA 57.495 32.000 0.00 0.00 0.00 3.71
539 540 8.717821 TCTAAAATGACAACGAATTTACTGAGG 58.282 33.333 0.00 0.00 0.00 3.86
540 541 9.746711 CTCTAAAATGACAACGAATTTACTGAG 57.253 33.333 0.00 0.00 0.00 3.35
541 542 9.483916 TCTCTAAAATGACAACGAATTTACTGA 57.516 29.630 0.00 0.00 0.00 3.41
544 545 9.490663 CCATCTCTAAAATGACAACGAATTTAC 57.509 33.333 0.00 0.00 0.00 2.01
545 546 8.673711 CCCATCTCTAAAATGACAACGAATTTA 58.326 33.333 0.00 0.00 0.00 1.40
546 547 7.176690 ACCCATCTCTAAAATGACAACGAATTT 59.823 33.333 0.00 0.00 0.00 1.82
547 548 6.659242 ACCCATCTCTAAAATGACAACGAATT 59.341 34.615 0.00 0.00 0.00 2.17
548 549 6.180472 ACCCATCTCTAAAATGACAACGAAT 58.820 36.000 0.00 0.00 0.00 3.34
549 550 5.556915 ACCCATCTCTAAAATGACAACGAA 58.443 37.500 0.00 0.00 0.00 3.85
550 551 5.160607 ACCCATCTCTAAAATGACAACGA 57.839 39.130 0.00 0.00 0.00 3.85
551 552 5.880054 AACCCATCTCTAAAATGACAACG 57.120 39.130 0.00 0.00 0.00 4.10
561 562 9.131791 GCAAAAGGATAATTAACCCATCTCTAA 57.868 33.333 8.09 0.00 0.00 2.10
562 563 7.724061 GGCAAAAGGATAATTAACCCATCTCTA 59.276 37.037 8.09 0.00 0.00 2.43
563 564 6.551227 GGCAAAAGGATAATTAACCCATCTCT 59.449 38.462 8.09 0.00 0.00 3.10
564 565 6.239317 GGGCAAAAGGATAATTAACCCATCTC 60.239 42.308 8.09 0.00 34.82 2.75
565 566 5.602561 GGGCAAAAGGATAATTAACCCATCT 59.397 40.000 8.09 0.00 34.82 2.90
566 567 5.602561 AGGGCAAAAGGATAATTAACCCATC 59.397 40.000 8.09 0.00 37.28 3.51
567 568 5.537914 AGGGCAAAAGGATAATTAACCCAT 58.462 37.500 8.09 0.00 37.28 4.00
568 569 4.954089 AGGGCAAAAGGATAATTAACCCA 58.046 39.130 8.09 0.00 37.28 4.51
569 570 4.959839 TGAGGGCAAAAGGATAATTAACCC 59.040 41.667 8.09 3.96 34.91 4.11
570 571 5.656859 ACTGAGGGCAAAAGGATAATTAACC 59.343 40.000 3.60 3.60 0.00 2.85
571 572 6.405842 CCACTGAGGGCAAAAGGATAATTAAC 60.406 42.308 0.00 0.00 0.00 2.01
572 573 5.656416 CCACTGAGGGCAAAAGGATAATTAA 59.344 40.000 0.00 0.00 0.00 1.40
573 574 5.200483 CCACTGAGGGCAAAAGGATAATTA 58.800 41.667 0.00 0.00 0.00 1.40
574 575 4.026052 CCACTGAGGGCAAAAGGATAATT 58.974 43.478 0.00 0.00 0.00 1.40
575 576 3.011708 ACCACTGAGGGCAAAAGGATAAT 59.988 43.478 0.00 0.00 43.89 1.28
576 577 2.378547 ACCACTGAGGGCAAAAGGATAA 59.621 45.455 0.00 0.00 43.89 1.75
577 578 1.992557 ACCACTGAGGGCAAAAGGATA 59.007 47.619 0.00 0.00 43.89 2.59
578 579 0.779997 ACCACTGAGGGCAAAAGGAT 59.220 50.000 0.00 0.00 43.89 3.24
579 580 0.178992 CACCACTGAGGGCAAAAGGA 60.179 55.000 0.00 0.00 43.89 3.36
580 581 0.468029 ACACCACTGAGGGCAAAAGG 60.468 55.000 0.00 0.00 43.89 3.11
581 582 0.954452 GACACCACTGAGGGCAAAAG 59.046 55.000 0.00 0.00 43.89 2.27
582 583 0.550914 AGACACCACTGAGGGCAAAA 59.449 50.000 0.00 0.00 43.89 2.44
583 584 0.550914 AAGACACCACTGAGGGCAAA 59.449 50.000 0.00 0.00 43.89 3.68
584 585 0.550914 AAAGACACCACTGAGGGCAA 59.449 50.000 0.00 0.00 43.89 4.52
585 586 0.179020 CAAAGACACCACTGAGGGCA 60.179 55.000 0.00 0.00 43.89 5.36
586 587 0.179018 ACAAAGACACCACTGAGGGC 60.179 55.000 0.00 0.00 43.89 5.19
587 588 1.597742 CACAAAGACACCACTGAGGG 58.402 55.000 0.00 0.00 43.89 4.30
588 589 0.947244 GCACAAAGACACCACTGAGG 59.053 55.000 0.00 0.00 45.67 3.86
589 590 1.869767 GAGCACAAAGACACCACTGAG 59.130 52.381 0.00 0.00 0.00 3.35
590 591 1.209261 TGAGCACAAAGACACCACTGA 59.791 47.619 0.00 0.00 0.00 3.41
591 592 1.600957 CTGAGCACAAAGACACCACTG 59.399 52.381 0.00 0.00 0.00 3.66
592 593 1.210478 ACTGAGCACAAAGACACCACT 59.790 47.619 0.00 0.00 0.00 4.00
593 594 1.668419 ACTGAGCACAAAGACACCAC 58.332 50.000 0.00 0.00 0.00 4.16
594 595 2.418368 AACTGAGCACAAAGACACCA 57.582 45.000 0.00 0.00 0.00 4.17
595 596 3.438360 CAAAACTGAGCACAAAGACACC 58.562 45.455 0.00 0.00 0.00 4.16
596 597 2.854185 GCAAAACTGAGCACAAAGACAC 59.146 45.455 0.00 0.00 0.00 3.67
597 598 2.159254 GGCAAAACTGAGCACAAAGACA 60.159 45.455 0.00 0.00 0.00 3.41
598 599 2.463876 GGCAAAACTGAGCACAAAGAC 58.536 47.619 0.00 0.00 0.00 3.01
599 600 1.408702 GGGCAAAACTGAGCACAAAGA 59.591 47.619 0.00 0.00 33.42 2.52
600 601 1.410153 AGGGCAAAACTGAGCACAAAG 59.590 47.619 0.00 0.00 36.38 2.77
601 602 1.408702 GAGGGCAAAACTGAGCACAAA 59.591 47.619 0.00 0.00 36.38 2.83
602 603 1.032014 GAGGGCAAAACTGAGCACAA 58.968 50.000 0.00 0.00 36.38 3.33
603 604 0.106769 TGAGGGCAAAACTGAGCACA 60.107 50.000 0.00 0.00 36.38 4.57
604 605 0.595095 CTGAGGGCAAAACTGAGCAC 59.405 55.000 0.00 0.00 0.00 4.40
605 606 0.473755 TCTGAGGGCAAAACTGAGCA 59.526 50.000 0.00 0.00 0.00 4.26
606 607 1.471684 CATCTGAGGGCAAAACTGAGC 59.528 52.381 0.00 0.00 0.00 4.26
607 608 1.471684 GCATCTGAGGGCAAAACTGAG 59.528 52.381 0.00 0.00 0.00 3.35
608 609 1.202915 TGCATCTGAGGGCAAAACTGA 60.203 47.619 4.53 0.00 37.03 3.41
609 610 1.250328 TGCATCTGAGGGCAAAACTG 58.750 50.000 4.53 0.00 37.03 3.16
610 611 1.999648 TTGCATCTGAGGGCAAAACT 58.000 45.000 14.68 0.00 46.11 2.66
627 628 4.824289 AGGGCAAAACTGAGCATAATTTG 58.176 39.130 0.00 0.00 34.84 2.32
628 629 4.527816 TGAGGGCAAAACTGAGCATAATTT 59.472 37.500 0.00 0.00 0.00 1.82
629 630 4.088634 TGAGGGCAAAACTGAGCATAATT 58.911 39.130 0.00 0.00 0.00 1.40
630 631 3.698040 CTGAGGGCAAAACTGAGCATAAT 59.302 43.478 0.00 0.00 0.00 1.28
631 632 3.084039 CTGAGGGCAAAACTGAGCATAA 58.916 45.455 0.00 0.00 0.00 1.90
632 633 2.305635 TCTGAGGGCAAAACTGAGCATA 59.694 45.455 0.00 0.00 0.00 3.14
633 634 1.074405 TCTGAGGGCAAAACTGAGCAT 59.926 47.619 0.00 0.00 0.00 3.79
662 663 1.355720 ACTAGGGGCAAAACTGAGCAT 59.644 47.619 0.00 0.00 0.00 3.79
843 846 2.411628 AATATAGCACACCCGCAACA 57.588 45.000 0.00 0.00 0.00 3.33
2043 2575 4.501915 CCATGTCAAACTCTTGCCATTTGT 60.502 41.667 0.00 0.00 28.75 2.83
2044 2576 3.991773 CCATGTCAAACTCTTGCCATTTG 59.008 43.478 0.00 0.00 28.75 2.32
2045 2577 3.007182 CCCATGTCAAACTCTTGCCATTT 59.993 43.478 0.00 0.00 28.75 2.32
2046 2578 2.564062 CCCATGTCAAACTCTTGCCATT 59.436 45.455 0.00 0.00 28.75 3.16
2047 2579 2.173519 CCCATGTCAAACTCTTGCCAT 58.826 47.619 0.00 0.00 31.37 4.40
2048 2580 1.133513 ACCCATGTCAAACTCTTGCCA 60.134 47.619 0.00 0.00 32.14 4.92
2049 2581 1.620822 ACCCATGTCAAACTCTTGCC 58.379 50.000 0.00 0.00 32.14 4.52
2050 2582 2.749621 CCTACCCATGTCAAACTCTTGC 59.250 50.000 0.00 0.00 32.14 4.01
2051 2583 3.009033 TCCCTACCCATGTCAAACTCTTG 59.991 47.826 0.00 0.00 0.00 3.02
2052 2584 3.256704 TCCCTACCCATGTCAAACTCTT 58.743 45.455 0.00 0.00 0.00 2.85
2053 2585 2.915869 TCCCTACCCATGTCAAACTCT 58.084 47.619 0.00 0.00 0.00 3.24
2054 2586 3.610911 CTTCCCTACCCATGTCAAACTC 58.389 50.000 0.00 0.00 0.00 3.01
2055 2587 2.290960 GCTTCCCTACCCATGTCAAACT 60.291 50.000 0.00 0.00 0.00 2.66
2056 2588 2.092323 GCTTCCCTACCCATGTCAAAC 58.908 52.381 0.00 0.00 0.00 2.93
2057 2589 1.707989 TGCTTCCCTACCCATGTCAAA 59.292 47.619 0.00 0.00 0.00 2.69
2058 2590 1.367346 TGCTTCCCTACCCATGTCAA 58.633 50.000 0.00 0.00 0.00 3.18
2059 2591 1.367346 TTGCTTCCCTACCCATGTCA 58.633 50.000 0.00 0.00 0.00 3.58
2060 2592 2.301346 CATTGCTTCCCTACCCATGTC 58.699 52.381 0.00 0.00 0.00 3.06
2061 2593 1.640670 ACATTGCTTCCCTACCCATGT 59.359 47.619 0.00 0.00 0.00 3.21
2062 2594 2.442236 ACATTGCTTCCCTACCCATG 57.558 50.000 0.00 0.00 0.00 3.66
2063 2595 4.663120 TGTATACATTGCTTCCCTACCCAT 59.337 41.667 0.08 0.00 0.00 4.00
2064 2596 4.041464 TGTATACATTGCTTCCCTACCCA 58.959 43.478 0.08 0.00 0.00 4.51
2065 2597 4.699925 TGTATACATTGCTTCCCTACCC 57.300 45.455 0.08 0.00 0.00 3.69
2066 2598 6.038271 CACTTTGTATACATTGCTTCCCTACC 59.962 42.308 6.36 0.00 0.00 3.18
2067 2599 6.821665 TCACTTTGTATACATTGCTTCCCTAC 59.178 38.462 6.36 0.00 0.00 3.18
2068 2600 6.953101 TCACTTTGTATACATTGCTTCCCTA 58.047 36.000 6.36 0.00 0.00 3.53
2069 2601 5.815581 TCACTTTGTATACATTGCTTCCCT 58.184 37.500 6.36 0.00 0.00 4.20
2070 2602 5.880332 TCTCACTTTGTATACATTGCTTCCC 59.120 40.000 6.36 0.00 0.00 3.97
2071 2603 6.595716 AGTCTCACTTTGTATACATTGCTTCC 59.404 38.462 6.36 0.00 0.00 3.46
2072 2604 7.118390 ACAGTCTCACTTTGTATACATTGCTTC 59.882 37.037 6.36 0.00 0.00 3.86
2073 2605 6.936900 ACAGTCTCACTTTGTATACATTGCTT 59.063 34.615 6.36 0.00 0.00 3.91
2074 2606 6.369890 CACAGTCTCACTTTGTATACATTGCT 59.630 38.462 6.36 0.00 0.00 3.91
2075 2607 6.368791 TCACAGTCTCACTTTGTATACATTGC 59.631 38.462 6.36 0.00 28.64 3.56
2076 2608 7.889589 TCACAGTCTCACTTTGTATACATTG 57.110 36.000 6.36 5.32 28.64 2.82
2077 2609 8.902540 TTTCACAGTCTCACTTTGTATACATT 57.097 30.769 6.36 0.00 28.64 2.71
2078 2610 9.507329 AATTTCACAGTCTCACTTTGTATACAT 57.493 29.630 6.36 0.00 28.64 2.29
2079 2611 8.902540 AATTTCACAGTCTCACTTTGTATACA 57.097 30.769 0.08 0.08 28.64 2.29
2080 2612 9.599322 CAAATTTCACAGTCTCACTTTGTATAC 57.401 33.333 0.00 0.00 28.64 1.47
2081 2613 9.337396 ACAAATTTCACAGTCTCACTTTGTATA 57.663 29.630 0.00 0.00 34.75 1.47
2082 2614 8.225603 ACAAATTTCACAGTCTCACTTTGTAT 57.774 30.769 0.00 0.00 34.75 2.29
2083 2615 7.335673 TGACAAATTTCACAGTCTCACTTTGTA 59.664 33.333 7.62 0.00 36.15 2.41
2084 2616 6.150976 TGACAAATTTCACAGTCTCACTTTGT 59.849 34.615 7.62 0.00 38.04 2.83
2085 2617 6.554419 TGACAAATTTCACAGTCTCACTTTG 58.446 36.000 7.62 0.00 32.41 2.77
2086 2618 6.757897 TGACAAATTTCACAGTCTCACTTT 57.242 33.333 7.62 0.00 32.41 2.66
2087 2619 6.757897 TTGACAAATTTCACAGTCTCACTT 57.242 33.333 7.62 0.00 32.41 3.16
2088 2620 6.757897 TTTGACAAATTTCACAGTCTCACT 57.242 33.333 0.00 0.00 32.41 3.41
2089 2621 7.810766 TTTTTGACAAATTTCACAGTCTCAC 57.189 32.000 0.50 0.00 32.41 3.51
2138 2670 1.070601 GTCCCCAGCTGCACAATTTTT 59.929 47.619 8.66 0.00 0.00 1.94
2139 2671 0.681175 GTCCCCAGCTGCACAATTTT 59.319 50.000 8.66 0.00 0.00 1.82
2140 2672 0.178953 AGTCCCCAGCTGCACAATTT 60.179 50.000 8.66 0.00 0.00 1.82
2141 2673 0.610232 GAGTCCCCAGCTGCACAATT 60.610 55.000 8.66 0.00 0.00 2.32
2142 2674 1.001641 GAGTCCCCAGCTGCACAAT 60.002 57.895 8.66 0.00 0.00 2.71
2143 2675 2.431683 GAGTCCCCAGCTGCACAA 59.568 61.111 8.66 0.00 0.00 3.33
2144 2676 4.007644 CGAGTCCCCAGCTGCACA 62.008 66.667 8.66 0.00 0.00 4.57
2145 2677 3.240134 TTCGAGTCCCCAGCTGCAC 62.240 63.158 8.66 4.32 0.00 4.57
2146 2678 2.922503 TTCGAGTCCCCAGCTGCA 60.923 61.111 8.66 0.00 0.00 4.41
2147 2679 2.435059 GTTCGAGTCCCCAGCTGC 60.435 66.667 8.66 0.00 0.00 5.25
2148 2680 2.266055 GGTTCGAGTCCCCAGCTG 59.734 66.667 6.78 6.78 0.00 4.24
2149 2681 3.003763 GGGTTCGAGTCCCCAGCT 61.004 66.667 14.49 0.00 40.88 4.24
2150 2682 3.319198 TGGGTTCGAGTCCCCAGC 61.319 66.667 20.23 0.00 46.06 4.85
2153 2685 1.295746 GTCTTGGGTTCGAGTCCCC 59.704 63.158 20.23 15.12 44.00 4.81
2154 2686 1.295746 GGTCTTGGGTTCGAGTCCC 59.704 63.158 17.46 17.46 44.81 4.46
2155 2687 1.080025 CGGTCTTGGGTTCGAGTCC 60.080 63.158 0.82 0.82 31.75 3.85
2156 2688 1.737008 GCGGTCTTGGGTTCGAGTC 60.737 63.158 0.00 0.00 0.00 3.36
2157 2689 2.342648 GCGGTCTTGGGTTCGAGT 59.657 61.111 0.00 0.00 0.00 4.18
2158 2690 2.809601 CGCGGTCTTGGGTTCGAG 60.810 66.667 0.00 0.00 0.00 4.04
2159 2691 3.608662 ACGCGGTCTTGGGTTCGA 61.609 61.111 12.47 0.00 0.00 3.71
2160 2692 3.411351 CACGCGGTCTTGGGTTCG 61.411 66.667 12.47 0.00 32.02 3.95
2161 2693 2.798148 ATCCACGCGGTCTTGGGTTC 62.798 60.000 12.47 0.00 32.85 3.62
2162 2694 2.406002 AATCCACGCGGTCTTGGGTT 62.406 55.000 12.47 8.82 30.86 4.11
2163 2695 2.406002 AAATCCACGCGGTCTTGGGT 62.406 55.000 12.47 1.20 32.85 4.51
2164 2696 1.674322 AAATCCACGCGGTCTTGGG 60.674 57.895 12.47 1.70 32.85 4.12
2165 2697 1.234615 ACAAATCCACGCGGTCTTGG 61.235 55.000 12.47 9.41 32.47 3.61
2166 2698 0.110238 CACAAATCCACGCGGTCTTG 60.110 55.000 12.47 8.98 33.65 3.02
2167 2699 1.234615 CCACAAATCCACGCGGTCTT 61.235 55.000 12.47 0.00 0.00 3.01
2168 2700 1.671054 CCACAAATCCACGCGGTCT 60.671 57.895 12.47 0.00 0.00 3.85
2169 2701 1.964373 ACCACAAATCCACGCGGTC 60.964 57.895 12.47 0.00 0.00 4.79
2170 2702 2.112297 ACCACAAATCCACGCGGT 59.888 55.556 12.47 0.00 0.00 5.68
2171 2703 1.791103 AACACCACAAATCCACGCGG 61.791 55.000 12.47 0.00 0.00 6.46
2172 2704 0.030101 AAACACCACAAATCCACGCG 59.970 50.000 3.53 3.53 0.00 6.01
2173 2705 2.351350 CCTAAACACCACAAATCCACGC 60.351 50.000 0.00 0.00 0.00 5.34
2174 2706 2.227865 CCCTAAACACCACAAATCCACG 59.772 50.000 0.00 0.00 0.00 4.94
2175 2707 2.029380 GCCCTAAACACCACAAATCCAC 60.029 50.000 0.00 0.00 0.00 4.02
2176 2708 2.158385 AGCCCTAAACACCACAAATCCA 60.158 45.455 0.00 0.00 0.00 3.41
2177 2709 2.231235 CAGCCCTAAACACCACAAATCC 59.769 50.000 0.00 0.00 0.00 3.01
2178 2710 2.890945 ACAGCCCTAAACACCACAAATC 59.109 45.455 0.00 0.00 0.00 2.17
2179 2711 2.627699 CACAGCCCTAAACACCACAAAT 59.372 45.455 0.00 0.00 0.00 2.32
2180 2712 2.028130 CACAGCCCTAAACACCACAAA 58.972 47.619 0.00 0.00 0.00 2.83
2181 2713 1.686355 CACAGCCCTAAACACCACAA 58.314 50.000 0.00 0.00 0.00 3.33
2182 2714 0.821711 GCACAGCCCTAAACACCACA 60.822 55.000 0.00 0.00 0.00 4.17
2183 2715 0.537371 AGCACAGCCCTAAACACCAC 60.537 55.000 0.00 0.00 0.00 4.16
2184 2716 0.537143 CAGCACAGCCCTAAACACCA 60.537 55.000 0.00 0.00 0.00 4.17
2185 2717 1.244019 CCAGCACAGCCCTAAACACC 61.244 60.000 0.00 0.00 0.00 4.16
2186 2718 0.537371 ACCAGCACAGCCCTAAACAC 60.537 55.000 0.00 0.00 0.00 3.32
2187 2719 1.060729 TACCAGCACAGCCCTAAACA 58.939 50.000 0.00 0.00 0.00 2.83
2188 2720 1.810755 GTTACCAGCACAGCCCTAAAC 59.189 52.381 0.00 0.00 0.00 2.01
2189 2721 1.271707 GGTTACCAGCACAGCCCTAAA 60.272 52.381 0.00 0.00 0.00 1.85
2190 2722 0.326927 GGTTACCAGCACAGCCCTAA 59.673 55.000 0.00 0.00 0.00 2.69
2191 2723 1.895020 CGGTTACCAGCACAGCCCTA 61.895 60.000 1.13 0.00 0.00 3.53
2192 2724 2.757077 GGTTACCAGCACAGCCCT 59.243 61.111 0.00 0.00 0.00 5.19
2193 2725 2.746277 CGGTTACCAGCACAGCCC 60.746 66.667 1.13 0.00 0.00 5.19
2194 2726 2.515996 TAGCGGTTACCAGCACAGCC 62.516 60.000 17.30 0.00 36.13 4.85
2195 2727 1.079405 TAGCGGTTACCAGCACAGC 60.079 57.895 17.30 5.03 35.77 4.40
2196 2728 0.246635 ACTAGCGGTTACCAGCACAG 59.753 55.000 17.30 15.20 35.48 3.66
2197 2729 1.203052 GTACTAGCGGTTACCAGCACA 59.797 52.381 17.30 6.66 35.48 4.57
2198 2730 1.203052 TGTACTAGCGGTTACCAGCAC 59.797 52.381 17.30 9.19 35.48 4.40
2199 2731 1.475280 CTGTACTAGCGGTTACCAGCA 59.525 52.381 17.30 5.89 35.48 4.41
2200 2732 1.747355 TCTGTACTAGCGGTTACCAGC 59.253 52.381 1.13 6.16 0.00 4.85
2201 2733 3.243434 CCATCTGTACTAGCGGTTACCAG 60.243 52.174 1.13 0.00 0.00 4.00
2202 2734 2.691526 CCATCTGTACTAGCGGTTACCA 59.308 50.000 1.13 0.00 0.00 3.25
2203 2735 2.545322 GCCATCTGTACTAGCGGTTACC 60.545 54.545 0.00 0.00 0.00 2.85
2204 2736 2.100252 TGCCATCTGTACTAGCGGTTAC 59.900 50.000 0.00 0.00 0.00 2.50
2205 2737 2.380941 TGCCATCTGTACTAGCGGTTA 58.619 47.619 0.00 0.00 0.00 2.85
2206 2738 1.191535 TGCCATCTGTACTAGCGGTT 58.808 50.000 0.00 0.00 0.00 4.44
2207 2739 1.137086 CTTGCCATCTGTACTAGCGGT 59.863 52.381 0.00 0.00 0.00 5.68
2208 2740 1.409064 TCTTGCCATCTGTACTAGCGG 59.591 52.381 0.00 0.00 0.00 5.52
2209 2741 2.099921 ACTCTTGCCATCTGTACTAGCG 59.900 50.000 0.00 0.00 0.00 4.26
2210 2742 3.810310 ACTCTTGCCATCTGTACTAGC 57.190 47.619 0.00 0.00 0.00 3.42
2211 2743 5.578727 GTCAAACTCTTGCCATCTGTACTAG 59.421 44.000 0.00 0.00 32.14 2.57
2212 2744 5.011635 TGTCAAACTCTTGCCATCTGTACTA 59.988 40.000 0.00 0.00 32.14 1.82
2213 2745 4.202357 TGTCAAACTCTTGCCATCTGTACT 60.202 41.667 0.00 0.00 32.14 2.73
2214 2746 4.065088 TGTCAAACTCTTGCCATCTGTAC 58.935 43.478 0.00 0.00 32.14 2.90
2215 2747 4.350368 TGTCAAACTCTTGCCATCTGTA 57.650 40.909 0.00 0.00 32.14 2.74
2290 2999 3.685139 AACATTCATCACGGTCTCACT 57.315 42.857 0.00 0.00 0.00 3.41
2300 3185 1.662592 CGCGTGTGCAAACATTCATCA 60.663 47.619 8.00 0.00 42.97 3.07
2301 3186 0.976963 CGCGTGTGCAAACATTCATC 59.023 50.000 8.00 0.00 42.97 2.92
2302 3187 0.310543 ACGCGTGTGCAAACATTCAT 59.689 45.000 12.93 0.00 42.97 2.57
2379 3264 2.166870 CCATGTGGCAGTGCAAACATAT 59.833 45.455 26.21 13.59 35.98 1.78
2434 3319 8.980610 CAAATTTATTCTGAGTGCAAACATGAA 58.019 29.630 0.00 0.00 0.00 2.57
2435 3320 7.116662 GCAAATTTATTCTGAGTGCAAACATGA 59.883 33.333 0.00 0.00 0.00 3.07
2436 3321 7.095565 TGCAAATTTATTCTGAGTGCAAACATG 60.096 33.333 0.00 0.00 37.56 3.21
2437 3322 6.930164 TGCAAATTTATTCTGAGTGCAAACAT 59.070 30.769 0.00 0.00 37.56 2.71
2438 3323 6.279123 TGCAAATTTATTCTGAGTGCAAACA 58.721 32.000 0.00 0.00 37.56 2.83
2439 3324 6.768029 TGCAAATTTATTCTGAGTGCAAAC 57.232 33.333 0.00 0.00 37.56 2.93
2440 3325 6.930164 ACATGCAAATTTATTCTGAGTGCAAA 59.070 30.769 0.00 0.00 43.10 3.68
2441 3326 6.457355 ACATGCAAATTTATTCTGAGTGCAA 58.543 32.000 0.00 0.00 43.10 4.08
2443 3328 6.956299 AACATGCAAATTTATTCTGAGTGC 57.044 33.333 0.00 0.00 0.00 4.40
2444 3329 9.630098 AACTAACATGCAAATTTATTCTGAGTG 57.370 29.630 0.00 0.00 0.00 3.51
2445 3330 9.846248 GAACTAACATGCAAATTTATTCTGAGT 57.154 29.630 0.00 0.00 0.00 3.41
2446 3331 9.844790 TGAACTAACATGCAAATTTATTCTGAG 57.155 29.630 0.00 0.00 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.