Multiple sequence alignment - TraesCS4A01G299800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G299800 chr4A 100.000 6254 0 0 1 6254 597911275 597917528 0.000000e+00 11550.0
1 TraesCS4A01G299800 chr4A 95.652 46 2 0 197 242 577973990 577973945 2.420000e-09 75.0
2 TraesCS4A01G299800 chr4A 100.000 35 0 0 317 351 597911537 597911571 1.460000e-06 65.8
3 TraesCS4A01G299800 chr4A 100.000 35 0 0 263 297 597911591 597911625 1.460000e-06 65.8
4 TraesCS4A01G299800 chr4D 93.570 2986 135 24 3031 5986 5584645 5581687 0.000000e+00 4397.0
5 TraesCS4A01G299800 chr4D 95.000 680 26 5 2316 2990 5585327 5584651 0.000000e+00 1061.0
6 TraesCS4A01G299800 chr4D 82.781 935 87 32 868 1754 5586865 5585957 0.000000e+00 767.0
7 TraesCS4A01G299800 chr4D 88.889 450 22 10 1873 2320 5585778 5585355 4.290000e-146 529.0
8 TraesCS4A01G299800 chr4D 85.878 262 17 8 742 986 5589027 5588769 1.730000e-65 261.0
9 TraesCS4A01G299800 chr4D 94.737 57 2 1 1775 1831 5585855 5585800 3.110000e-13 87.9
10 TraesCS4A01G299800 chr4B 93.826 1652 72 10 3030 4665 9705842 9704205 0.000000e+00 2459.0
11 TraesCS4A01G299800 chr4B 91.080 1592 72 20 4698 6254 9704209 9702653 0.000000e+00 2089.0
12 TraesCS4A01G299800 chr4B 94.721 682 25 8 2316 2990 9706524 9705847 0.000000e+00 1050.0
13 TraesCS4A01G299800 chr4B 87.464 686 31 24 739 1403 9708254 9707603 0.000000e+00 739.0
14 TraesCS4A01G299800 chr4B 89.046 566 29 11 1773 2320 9707102 9706552 0.000000e+00 671.0
15 TraesCS4A01G299800 chr4B 87.591 274 19 5 1485 1746 9707492 9707222 2.830000e-78 303.0
16 TraesCS4A01G299800 chr4B 100.000 28 0 0 5773 5800 130049695 130049668 1.100000e-02 52.8
17 TraesCS4A01G299800 chrUn 81.996 461 36 20 1317 1746 110375169 110374725 1.290000e-91 348.0
18 TraesCS4A01G299800 chr3D 81.779 461 37 21 1317 1746 19075916 19075472 6.000000e-90 342.0
19 TraesCS4A01G299800 chr3D 81.002 479 40 24 1299 1746 478941580 478941122 3.610000e-87 333.0
20 TraesCS4A01G299800 chr3D 80.526 190 23 9 2 187 436390041 436389862 3.930000e-27 134.0
21 TraesCS4A01G299800 chr3D 81.356 118 14 5 155 270 590738511 590738622 8.640000e-14 89.8
22 TraesCS4A01G299800 chr6D 81.223 458 44 19 1317 1746 270896729 270897172 1.300000e-86 331.0
23 TraesCS4A01G299800 chr6D 100.000 29 0 0 5773 5801 400069531 400069559 3.000000e-03 54.7
24 TraesCS4A01G299800 chr7D 80.694 461 41 22 1317 1746 117425322 117425765 1.310000e-81 315.0
25 TraesCS4A01G299800 chr7D 80.736 462 40 23 1317 1746 439001431 439000987 1.310000e-81 315.0
26 TraesCS4A01G299800 chr7D 80.736 462 35 23 1317 1746 427383296 427383735 1.690000e-80 311.0
27 TraesCS4A01G299800 chr1D 80.736 462 39 23 1317 1746 408674417 408674860 1.310000e-81 315.0
28 TraesCS4A01G299800 chr2B 79.710 138 18 9 306 441 50474225 50474354 2.400000e-14 91.6
29 TraesCS4A01G299800 chr2B 75.325 231 32 19 110 328 50640601 50640384 3.110000e-13 87.9
30 TraesCS4A01G299800 chr7A 100.000 28 0 0 5773 5800 568973373 568973346 1.100000e-02 52.8
31 TraesCS4A01G299800 chr6B 100.000 28 0 0 5773 5800 649496201 649496228 1.100000e-02 52.8
32 TraesCS4A01G299800 chr5A 100.000 28 0 0 5770 5797 634054977 634054950 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G299800 chr4A 597911275 597917528 6253 False 11550.000000 11550 100.000000 1 6254 1 chr4A.!!$F1 6253
1 TraesCS4A01G299800 chr4D 5581687 5589027 7340 True 1183.816667 4397 90.142500 742 5986 6 chr4D.!!$R1 5244
2 TraesCS4A01G299800 chr4B 9702653 9708254 5601 True 1218.500000 2459 90.621333 739 6254 6 chr4B.!!$R2 5515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
470 471 0.036306 AATCGAGGGAGGCAAAACGT 59.964 50.0 0.00 0.00 0.00 3.99 F
471 472 0.036306 ATCGAGGGAGGCAAAACGTT 59.964 50.0 0.00 0.00 0.00 3.99 F
658 659 0.036952 CCGTGTGGCTTGATCTCACT 60.037 55.0 0.00 0.00 33.04 3.41 F
1015 3063 0.105964 CCCCATGGCATTGCAGATTG 59.894 55.0 6.09 2.08 0.00 2.67 F
1958 4206 0.321653 AGTGTCAAATGGAGCCCGAC 60.322 55.0 0.00 0.00 0.00 4.79 F
2994 5280 0.108138 GCATACTGCAGAGGGACGTT 60.108 55.0 23.35 0.00 44.26 3.99 F
4463 6770 0.103026 TGGATGAGATGAAGCGTCGG 59.897 55.0 0.00 0.00 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2464 4747 1.095228 ATATTCCACGGGCAACAGCG 61.095 55.000 0.00 0.0 39.74 5.18 R
2479 4762 6.069088 TGACACTCACTAAATTGGGGGATATT 60.069 38.462 0.00 0.0 0.00 1.28 R
2641 4926 1.810151 GGAAGTTGATGCCGTGCTAAA 59.190 47.619 0.00 0.0 0.00 1.85 R
2695 4980 1.070309 GTGACAGCAAGAACAAGAGCG 60.070 52.381 0.00 0.0 0.00 5.03 R
3669 5970 0.166814 CGCACTGCAGAAAAGTAGCC 59.833 55.000 23.35 0.0 0.00 3.93 R
4614 6921 0.106369 GGCCGGGGGTAATAAAGCTT 60.106 55.000 2.18 0.0 0.00 3.74 R
6229 8578 0.031994 GTGCCAACATTGAAACGGCT 59.968 50.000 0.00 0.0 43.38 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.857777 TTTTGCACAATGGACCAAATAAAG 57.142 33.333 0.00 0.00 0.00 1.85
31 32 5.798125 TTGCACAATGGACCAAATAAAGA 57.202 34.783 0.00 0.00 0.00 2.52
32 33 5.798125 TGCACAATGGACCAAATAAAGAA 57.202 34.783 0.00 0.00 0.00 2.52
33 34 6.166984 TGCACAATGGACCAAATAAAGAAA 57.833 33.333 0.00 0.00 0.00 2.52
34 35 6.586344 TGCACAATGGACCAAATAAAGAAAA 58.414 32.000 0.00 0.00 0.00 2.29
35 36 7.050377 TGCACAATGGACCAAATAAAGAAAAA 58.950 30.769 0.00 0.00 0.00 1.94
55 56 3.955771 AAAAATACAGCACGACGTTGT 57.044 38.095 1.48 1.48 42.38 3.32
56 57 2.941891 AAATACAGCACGACGTTGTG 57.058 45.000 28.26 28.26 39.68 3.33
57 58 1.860676 AATACAGCACGACGTTGTGT 58.139 45.000 31.29 17.81 39.68 3.72
58 59 1.860676 ATACAGCACGACGTTGTGTT 58.139 45.000 31.29 25.42 39.68 3.32
59 60 1.642728 TACAGCACGACGTTGTGTTT 58.357 45.000 31.29 19.88 39.68 2.83
60 61 0.800012 ACAGCACGACGTTGTGTTTT 59.200 45.000 31.29 19.51 41.94 2.43
61 62 1.198178 ACAGCACGACGTTGTGTTTTT 59.802 42.857 31.29 15.69 41.94 1.94
62 63 1.837747 CAGCACGACGTTGTGTTTTTC 59.162 47.619 31.29 17.49 41.94 2.29
63 64 0.828959 GCACGACGTTGTGTTTTTCG 59.171 50.000 31.29 11.41 41.94 3.46
64 65 1.787635 GCACGACGTTGTGTTTTTCGT 60.788 47.619 31.29 12.05 43.41 3.85
65 66 2.088449 CACGACGTTGTGTTTTTCGTC 58.912 47.619 25.09 6.50 45.70 4.20
66 67 1.060986 ACGACGTTGTGTTTTTCGTCC 59.939 47.619 7.89 0.00 46.18 4.79
67 68 1.325338 CGACGTTGTGTTTTTCGTCCT 59.675 47.619 10.16 0.00 46.18 3.85
68 69 2.222863 CGACGTTGTGTTTTTCGTCCTT 60.223 45.455 10.16 0.00 46.18 3.36
69 70 3.095738 GACGTTGTGTTTTTCGTCCTTG 58.904 45.455 5.44 0.00 44.18 3.61
70 71 2.743126 ACGTTGTGTTTTTCGTCCTTGA 59.257 40.909 0.00 0.00 30.71 3.02
71 72 3.095738 CGTTGTGTTTTTCGTCCTTGAC 58.904 45.455 0.00 0.00 0.00 3.18
72 73 3.425094 CGTTGTGTTTTTCGTCCTTGACA 60.425 43.478 0.00 0.00 32.09 3.58
73 74 4.477780 GTTGTGTTTTTCGTCCTTGACAA 58.522 39.130 0.00 0.00 32.09 3.18
74 75 4.768130 TGTGTTTTTCGTCCTTGACAAA 57.232 36.364 0.00 0.00 32.09 2.83
75 76 5.122512 TGTGTTTTTCGTCCTTGACAAAA 57.877 34.783 0.00 0.00 32.09 2.44
76 77 5.529791 TGTGTTTTTCGTCCTTGACAAAAA 58.470 33.333 10.45 10.45 34.13 1.94
77 78 6.159988 TGTGTTTTTCGTCCTTGACAAAAAT 58.840 32.000 14.37 0.00 36.30 1.82
78 79 7.313646 TGTGTTTTTCGTCCTTGACAAAAATA 58.686 30.769 14.37 11.41 36.30 1.40
79 80 7.813148 TGTGTTTTTCGTCCTTGACAAAAATAA 59.187 29.630 14.37 8.27 36.30 1.40
80 81 8.648968 GTGTTTTTCGTCCTTGACAAAAATAAA 58.351 29.630 14.37 6.85 36.30 1.40
81 82 8.865001 TGTTTTTCGTCCTTGACAAAAATAAAG 58.135 29.630 14.37 0.00 36.30 1.85
82 83 9.078753 GTTTTTCGTCCTTGACAAAAATAAAGA 57.921 29.630 14.37 0.00 36.30 2.52
83 84 9.640963 TTTTTCGTCCTTGACAAAAATAAAGAA 57.359 25.926 10.45 0.00 30.25 2.52
84 85 9.640963 TTTTCGTCCTTGACAAAAATAAAGAAA 57.359 25.926 0.00 0.00 25.78 2.52
85 86 9.640963 TTTCGTCCTTGACAAAAATAAAGAAAA 57.359 25.926 0.00 0.00 32.09 2.29
86 87 9.640963 TTCGTCCTTGACAAAAATAAAGAAAAA 57.359 25.926 0.00 0.00 32.09 1.94
87 88 9.810545 TCGTCCTTGACAAAAATAAAGAAAAAT 57.189 25.926 0.00 0.00 32.09 1.82
132 133 4.979943 TTTGCACAGTGAAACATCTTGA 57.020 36.364 4.15 0.00 41.43 3.02
133 134 3.969117 TGCACAGTGAAACATCTTGAC 57.031 42.857 4.15 0.00 41.43 3.18
134 135 2.287644 TGCACAGTGAAACATCTTGACG 59.712 45.455 4.15 0.00 41.43 4.35
135 136 2.543848 GCACAGTGAAACATCTTGACGA 59.456 45.455 4.15 0.00 41.43 4.20
136 137 3.002246 GCACAGTGAAACATCTTGACGAA 59.998 43.478 4.15 0.00 41.43 3.85
137 138 4.495679 GCACAGTGAAACATCTTGACGAAA 60.496 41.667 4.15 0.00 41.43 3.46
138 139 5.568482 CACAGTGAAACATCTTGACGAAAA 58.432 37.500 0.00 0.00 41.43 2.29
139 140 6.027131 CACAGTGAAACATCTTGACGAAAAA 58.973 36.000 0.00 0.00 41.43 1.94
140 141 6.692681 CACAGTGAAACATCTTGACGAAAAAT 59.307 34.615 0.00 0.00 41.43 1.82
141 142 7.220683 CACAGTGAAACATCTTGACGAAAAATT 59.779 33.333 0.00 0.00 41.43 1.82
142 143 7.759433 ACAGTGAAACATCTTGACGAAAAATTT 59.241 29.630 0.00 0.00 41.43 1.82
143 144 8.261908 CAGTGAAACATCTTGACGAAAAATTTC 58.738 33.333 0.00 0.00 41.43 2.17
144 145 7.973388 AGTGAAACATCTTGACGAAAAATTTCA 59.027 29.630 6.69 0.00 41.43 2.69
145 146 8.755018 GTGAAACATCTTGACGAAAAATTTCAT 58.245 29.630 6.69 0.00 36.33 2.57
146 147 9.958234 TGAAACATCTTGACGAAAAATTTCATA 57.042 25.926 6.69 0.00 37.01 2.15
170 171 7.662604 AAATTGATTTTTCAGATCACAAGGC 57.337 32.000 0.00 0.00 33.51 4.35
171 172 5.787953 TTGATTTTTCAGATCACAAGGCA 57.212 34.783 0.00 0.00 33.51 4.75
172 173 5.125100 TGATTTTTCAGATCACAAGGCAC 57.875 39.130 0.00 0.00 0.00 5.01
173 174 4.583907 TGATTTTTCAGATCACAAGGCACA 59.416 37.500 0.00 0.00 0.00 4.57
174 175 5.244402 TGATTTTTCAGATCACAAGGCACAT 59.756 36.000 0.00 0.00 0.00 3.21
175 176 4.508461 TTTTCAGATCACAAGGCACATG 57.492 40.909 0.00 0.00 0.00 3.21
176 177 2.118313 TCAGATCACAAGGCACATGG 57.882 50.000 0.00 0.00 0.00 3.66
177 178 1.352017 TCAGATCACAAGGCACATGGT 59.648 47.619 0.00 0.00 0.00 3.55
178 179 2.165167 CAGATCACAAGGCACATGGTT 58.835 47.619 0.00 0.00 0.00 3.67
179 180 2.559668 CAGATCACAAGGCACATGGTTT 59.440 45.455 0.00 0.00 0.00 3.27
180 181 3.006110 CAGATCACAAGGCACATGGTTTT 59.994 43.478 0.00 0.00 0.00 2.43
181 182 4.218200 CAGATCACAAGGCACATGGTTTTA 59.782 41.667 0.00 0.00 0.00 1.52
182 183 4.832266 AGATCACAAGGCACATGGTTTTAA 59.168 37.500 0.00 0.00 0.00 1.52
183 184 5.481473 AGATCACAAGGCACATGGTTTTAAT 59.519 36.000 0.00 0.00 0.00 1.40
184 185 5.132897 TCACAAGGCACATGGTTTTAATC 57.867 39.130 0.00 0.00 0.00 1.75
185 186 4.586421 TCACAAGGCACATGGTTTTAATCA 59.414 37.500 0.00 0.00 0.00 2.57
186 187 5.245751 TCACAAGGCACATGGTTTTAATCAT 59.754 36.000 0.00 0.00 0.00 2.45
187 188 6.435591 TCACAAGGCACATGGTTTTAATCATA 59.564 34.615 0.00 0.00 0.00 2.15
188 189 6.531240 CACAAGGCACATGGTTTTAATCATAC 59.469 38.462 0.00 0.00 0.00 2.39
189 190 5.852282 AGGCACATGGTTTTAATCATACC 57.148 39.130 0.00 0.00 0.00 2.73
190 191 5.268387 AGGCACATGGTTTTAATCATACCA 58.732 37.500 0.00 0.00 45.32 3.25
240 241 7.083875 TGACTGTTTTATAAAGTAGCATGGC 57.916 36.000 0.00 0.00 0.00 4.40
241 242 6.657117 TGACTGTTTTATAAAGTAGCATGGCA 59.343 34.615 0.00 0.00 0.00 4.92
242 243 7.339212 TGACTGTTTTATAAAGTAGCATGGCAT 59.661 33.333 0.00 0.00 0.00 4.40
243 244 8.066612 ACTGTTTTATAAAGTAGCATGGCATT 57.933 30.769 0.00 0.00 0.00 3.56
244 245 8.531146 ACTGTTTTATAAAGTAGCATGGCATTT 58.469 29.630 0.00 0.00 0.00 2.32
245 246 9.369904 CTGTTTTATAAAGTAGCATGGCATTTT 57.630 29.630 0.00 0.00 0.00 1.82
246 247 9.717942 TGTTTTATAAAGTAGCATGGCATTTTT 57.282 25.926 0.00 0.00 0.00 1.94
299 300 9.840427 ATACATTTATGTTTTCTCTGTTTTCCG 57.160 29.630 0.02 0.00 41.97 4.30
300 301 7.712797 ACATTTATGTTTTCTCTGTTTTCCGT 58.287 30.769 0.00 0.00 37.90 4.69
301 302 8.842280 ACATTTATGTTTTCTCTGTTTTCCGTA 58.158 29.630 0.00 0.00 37.90 4.02
302 303 9.672086 CATTTATGTTTTCTCTGTTTTCCGTAA 57.328 29.630 0.00 0.00 0.00 3.18
303 304 9.893305 ATTTATGTTTTCTCTGTTTTCCGTAAG 57.107 29.630 0.00 0.00 0.00 2.34
304 305 8.665643 TTATGTTTTCTCTGTTTTCCGTAAGA 57.334 30.769 0.00 0.00 43.02 2.10
305 306 6.988622 TGTTTTCTCTGTTTTCCGTAAGAA 57.011 33.333 0.00 0.00 43.02 2.52
306 307 7.562454 TGTTTTCTCTGTTTTCCGTAAGAAT 57.438 32.000 0.00 0.00 43.02 2.40
307 308 7.992008 TGTTTTCTCTGTTTTCCGTAAGAATT 58.008 30.769 0.00 0.00 43.02 2.17
308 309 8.463607 TGTTTTCTCTGTTTTCCGTAAGAATTT 58.536 29.630 0.00 0.00 43.02 1.82
309 310 9.297586 GTTTTCTCTGTTTTCCGTAAGAATTTT 57.702 29.630 0.00 0.00 43.02 1.82
310 311 9.863845 TTTTCTCTGTTTTCCGTAAGAATTTTT 57.136 25.926 0.00 0.00 43.02 1.94
311 312 8.850454 TTCTCTGTTTTCCGTAAGAATTTTTG 57.150 30.769 0.00 0.00 43.02 2.44
312 313 7.992008 TCTCTGTTTTCCGTAAGAATTTTTGT 58.008 30.769 0.00 0.00 43.02 2.83
313 314 8.463607 TCTCTGTTTTCCGTAAGAATTTTTGTT 58.536 29.630 0.00 0.00 43.02 2.83
314 315 8.401046 TCTGTTTTCCGTAAGAATTTTTGTTG 57.599 30.769 0.00 0.00 43.02 3.33
315 316 8.030106 TCTGTTTTCCGTAAGAATTTTTGTTGT 58.970 29.630 0.00 0.00 43.02 3.32
316 317 8.535690 TGTTTTCCGTAAGAATTTTTGTTGTT 57.464 26.923 0.00 0.00 43.02 2.83
317 318 8.648968 TGTTTTCCGTAAGAATTTTTGTTGTTC 58.351 29.630 0.00 0.00 43.02 3.18
318 319 8.648968 GTTTTCCGTAAGAATTTTTGTTGTTCA 58.351 29.630 0.00 0.00 43.02 3.18
319 320 8.934507 TTTCCGTAAGAATTTTTGTTGTTCAT 57.065 26.923 0.00 0.00 43.02 2.57
320 321 7.922505 TCCGTAAGAATTTTTGTTGTTCATG 57.077 32.000 0.00 0.00 43.02 3.07
321 322 6.920758 TCCGTAAGAATTTTTGTTGTTCATGG 59.079 34.615 0.00 0.00 43.02 3.66
322 323 6.346518 CCGTAAGAATTTTTGTTGTTCATGGC 60.347 38.462 0.00 0.00 43.02 4.40
323 324 6.199908 CGTAAGAATTTTTGTTGTTCATGGCA 59.800 34.615 0.00 0.00 43.02 4.92
324 325 6.998968 AAGAATTTTTGTTGTTCATGGCAA 57.001 29.167 0.00 0.00 0.00 4.52
325 326 7.571080 AAGAATTTTTGTTGTTCATGGCAAT 57.429 28.000 0.00 0.00 0.00 3.56
326 327 7.571080 AGAATTTTTGTTGTTCATGGCAATT 57.429 28.000 0.00 0.00 0.00 2.32
327 328 8.674263 AGAATTTTTGTTGTTCATGGCAATTA 57.326 26.923 0.00 0.00 0.00 1.40
328 329 9.287373 AGAATTTTTGTTGTTCATGGCAATTAT 57.713 25.926 0.00 0.00 0.00 1.28
331 332 8.893219 TTTTTGTTGTTCATGGCAATTATACA 57.107 26.923 0.00 0.00 0.00 2.29
332 333 9.499479 TTTTTGTTGTTCATGGCAATTATACAT 57.501 25.926 0.00 0.00 0.00 2.29
333 334 9.499479 TTTTGTTGTTCATGGCAATTATACATT 57.501 25.926 0.00 0.00 0.00 2.71
334 335 9.499479 TTTGTTGTTCATGGCAATTATACATTT 57.501 25.926 0.00 0.00 0.00 2.32
414 415 6.812879 AAAAACATTAAACTAGGTCTCCGG 57.187 37.500 0.00 0.00 0.00 5.14
415 416 5.750352 AAACATTAAACTAGGTCTCCGGA 57.250 39.130 2.93 2.93 0.00 5.14
416 417 4.732672 ACATTAAACTAGGTCTCCGGAC 57.267 45.455 0.00 0.00 41.43 4.79
424 425 2.590092 GTCTCCGGACCAATGGGG 59.410 66.667 0.00 0.00 44.81 4.96
440 441 3.862991 GGTTCGCCCTAGCCCTCC 61.863 72.222 0.00 0.00 34.57 4.30
441 442 3.862991 GTTCGCCCTAGCCCTCCC 61.863 72.222 0.00 0.00 34.57 4.30
445 446 4.499116 GCCCTAGCCCTCCCCTGA 62.499 72.222 0.00 0.00 0.00 3.86
446 447 2.446802 CCCTAGCCCTCCCCTGAC 60.447 72.222 0.00 0.00 0.00 3.51
447 448 2.840102 CCTAGCCCTCCCCTGACG 60.840 72.222 0.00 0.00 0.00 4.35
448 449 2.279073 CTAGCCCTCCCCTGACGA 59.721 66.667 0.00 0.00 0.00 4.20
449 450 1.381327 CTAGCCCTCCCCTGACGAA 60.381 63.158 0.00 0.00 0.00 3.85
450 451 1.677637 CTAGCCCTCCCCTGACGAAC 61.678 65.000 0.00 0.00 0.00 3.95
451 452 2.449967 TAGCCCTCCCCTGACGAACA 62.450 60.000 0.00 0.00 0.00 3.18
452 453 2.890766 GCCCTCCCCTGACGAACAA 61.891 63.158 0.00 0.00 0.00 2.83
453 454 1.991230 CCCTCCCCTGACGAACAAT 59.009 57.895 0.00 0.00 0.00 2.71
454 455 0.107654 CCCTCCCCTGACGAACAATC 60.108 60.000 0.00 0.00 0.00 2.67
465 466 3.551259 GAACAATCGAGGGAGGCAA 57.449 52.632 0.00 0.00 0.00 4.52
466 467 1.821216 GAACAATCGAGGGAGGCAAA 58.179 50.000 0.00 0.00 0.00 3.68
467 468 2.159382 GAACAATCGAGGGAGGCAAAA 58.841 47.619 0.00 0.00 0.00 2.44
468 469 1.534729 ACAATCGAGGGAGGCAAAAC 58.465 50.000 0.00 0.00 0.00 2.43
469 470 0.447801 CAATCGAGGGAGGCAAAACG 59.552 55.000 0.00 0.00 0.00 3.60
470 471 0.036306 AATCGAGGGAGGCAAAACGT 59.964 50.000 0.00 0.00 0.00 3.99
471 472 0.036306 ATCGAGGGAGGCAAAACGTT 59.964 50.000 0.00 0.00 0.00 3.99
472 473 0.601841 TCGAGGGAGGCAAAACGTTC 60.602 55.000 0.00 0.00 0.00 3.95
473 474 1.866925 GAGGGAGGCAAAACGTTCG 59.133 57.895 0.00 0.00 0.00 3.95
474 475 2.183858 GAGGGAGGCAAAACGTTCGC 62.184 60.000 12.86 12.86 0.00 4.70
475 476 2.258726 GGGAGGCAAAACGTTCGCT 61.259 57.895 18.67 7.99 0.00 4.93
476 477 1.082104 GGAGGCAAAACGTTCGCTG 60.082 57.895 18.67 10.55 0.00 5.18
477 478 1.082104 GAGGCAAAACGTTCGCTGG 60.082 57.895 18.67 0.00 0.00 4.85
478 479 2.050442 GGCAAAACGTTCGCTGGG 60.050 61.111 18.67 0.80 0.00 4.45
479 480 2.548295 GGCAAAACGTTCGCTGGGA 61.548 57.895 18.67 0.00 0.00 4.37
480 481 1.082104 GCAAAACGTTCGCTGGGAG 60.082 57.895 13.73 0.00 0.00 4.30
481 482 1.082104 CAAAACGTTCGCTGGGAGC 60.082 57.895 0.00 0.00 38.02 4.70
482 483 1.227853 AAAACGTTCGCTGGGAGCT 60.228 52.632 0.00 0.00 39.60 4.09
483 484 1.507141 AAAACGTTCGCTGGGAGCTG 61.507 55.000 0.00 3.64 39.60 4.24
485 486 4.749310 CGTTCGCTGGGAGCTGCT 62.749 66.667 0.00 0.00 39.60 4.24
486 487 2.817396 GTTCGCTGGGAGCTGCTC 60.817 66.667 21.17 21.17 39.60 4.26
495 496 4.087892 GAGCTGCTCCCTGGCGAA 62.088 66.667 18.80 0.00 34.52 4.70
496 497 4.400961 AGCTGCTCCCTGGCGAAC 62.401 66.667 0.00 0.00 34.52 3.95
498 499 4.069232 CTGCTCCCTGGCGAACGA 62.069 66.667 0.00 0.00 34.52 3.85
499 500 3.376935 CTGCTCCCTGGCGAACGAT 62.377 63.158 0.00 0.00 34.52 3.73
500 501 2.586357 GCTCCCTGGCGAACGATC 60.586 66.667 0.00 0.00 0.00 3.69
514 515 3.614143 GATCGTTGGATCGGTCGC 58.386 61.111 0.00 0.00 39.72 5.19
515 516 1.949631 GATCGTTGGATCGGTCGCC 60.950 63.158 0.00 0.00 39.72 5.54
516 517 2.622903 GATCGTTGGATCGGTCGCCA 62.623 60.000 0.00 0.00 39.72 5.69
517 518 2.629050 ATCGTTGGATCGGTCGCCAG 62.629 60.000 0.00 0.00 35.23 4.85
518 519 2.577059 GTTGGATCGGTCGCCAGA 59.423 61.111 0.00 0.00 35.23 3.86
519 520 1.144057 GTTGGATCGGTCGCCAGAT 59.856 57.895 0.00 0.00 35.23 2.90
520 521 0.387929 GTTGGATCGGTCGCCAGATA 59.612 55.000 0.00 0.00 35.23 1.98
521 522 1.000955 GTTGGATCGGTCGCCAGATAT 59.999 52.381 0.00 0.00 35.23 1.63
522 523 1.338107 TGGATCGGTCGCCAGATATT 58.662 50.000 0.00 0.00 0.00 1.28
523 524 2.521126 TGGATCGGTCGCCAGATATTA 58.479 47.619 0.00 0.00 0.00 0.98
524 525 2.492088 TGGATCGGTCGCCAGATATTAG 59.508 50.000 0.00 0.00 0.00 1.73
525 526 2.753452 GGATCGGTCGCCAGATATTAGA 59.247 50.000 0.00 0.00 0.00 2.10
526 527 3.181495 GGATCGGTCGCCAGATATTAGAG 60.181 52.174 0.00 0.00 0.00 2.43
527 528 2.860009 TCGGTCGCCAGATATTAGAGT 58.140 47.619 0.00 0.00 0.00 3.24
528 529 2.812591 TCGGTCGCCAGATATTAGAGTC 59.187 50.000 0.00 0.00 0.00 3.36
529 530 2.095161 CGGTCGCCAGATATTAGAGTCC 60.095 54.545 0.00 0.00 0.00 3.85
530 531 3.158676 GGTCGCCAGATATTAGAGTCCT 58.841 50.000 0.00 0.00 0.00 3.85
531 532 3.574826 GGTCGCCAGATATTAGAGTCCTT 59.425 47.826 0.00 0.00 0.00 3.36
532 533 4.765856 GGTCGCCAGATATTAGAGTCCTTA 59.234 45.833 0.00 0.00 0.00 2.69
533 534 5.419471 GGTCGCCAGATATTAGAGTCCTTAT 59.581 44.000 0.00 0.00 0.00 1.73
534 535 6.602406 GGTCGCCAGATATTAGAGTCCTTATA 59.398 42.308 0.00 0.00 0.00 0.98
535 536 7.122353 GGTCGCCAGATATTAGAGTCCTTATAA 59.878 40.741 0.00 0.00 0.00 0.98
536 537 8.521176 GTCGCCAGATATTAGAGTCCTTATAAA 58.479 37.037 0.00 0.00 0.00 1.40
537 538 9.085645 TCGCCAGATATTAGAGTCCTTATAAAA 57.914 33.333 0.00 0.00 0.00 1.52
538 539 9.706691 CGCCAGATATTAGAGTCCTTATAAAAA 57.293 33.333 0.00 0.00 0.00 1.94
558 559 6.753107 AAAAATTTGTATGTACTCCTCCCG 57.247 37.500 0.00 0.00 0.00 5.14
559 560 2.973694 TTTGTATGTACTCCTCCCGC 57.026 50.000 0.00 0.00 0.00 6.13
560 561 1.855295 TTGTATGTACTCCTCCCGCA 58.145 50.000 0.00 0.00 0.00 5.69
561 562 2.082140 TGTATGTACTCCTCCCGCAT 57.918 50.000 0.00 0.00 0.00 4.73
562 563 3.232720 TGTATGTACTCCTCCCGCATA 57.767 47.619 0.00 0.00 0.00 3.14
563 564 3.568443 TGTATGTACTCCTCCCGCATAA 58.432 45.455 0.00 0.00 0.00 1.90
564 565 3.962063 TGTATGTACTCCTCCCGCATAAA 59.038 43.478 0.00 0.00 0.00 1.40
565 566 4.406326 TGTATGTACTCCTCCCGCATAAAA 59.594 41.667 0.00 0.00 0.00 1.52
566 567 3.536956 TGTACTCCTCCCGCATAAAAG 57.463 47.619 0.00 0.00 0.00 2.27
567 568 3.101437 TGTACTCCTCCCGCATAAAAGA 58.899 45.455 0.00 0.00 0.00 2.52
568 569 2.990066 ACTCCTCCCGCATAAAAGAG 57.010 50.000 0.00 0.00 0.00 2.85
569 570 1.486726 ACTCCTCCCGCATAAAAGAGG 59.513 52.381 0.00 0.00 46.11 3.69
577 578 4.558538 CCGCATAAAAGAGGGAGATTTG 57.441 45.455 0.00 0.00 0.00 2.32
578 579 3.947834 CCGCATAAAAGAGGGAGATTTGT 59.052 43.478 0.00 0.00 0.00 2.83
579 580 5.123227 CCGCATAAAAGAGGGAGATTTGTA 58.877 41.667 0.00 0.00 0.00 2.41
580 581 5.765182 CCGCATAAAAGAGGGAGATTTGTAT 59.235 40.000 0.00 0.00 0.00 2.29
581 582 6.293626 CCGCATAAAAGAGGGAGATTTGTATG 60.294 42.308 0.00 0.00 0.00 2.39
582 583 6.260936 CGCATAAAAGAGGGAGATTTGTATGT 59.739 38.462 0.00 0.00 0.00 2.29
583 584 7.420800 GCATAAAAGAGGGAGATTTGTATGTG 58.579 38.462 0.00 0.00 0.00 3.21
584 585 5.904362 AAAAGAGGGAGATTTGTATGTGC 57.096 39.130 0.00 0.00 0.00 4.57
585 586 4.851639 AAGAGGGAGATTTGTATGTGCT 57.148 40.909 0.00 0.00 0.00 4.40
586 587 4.414337 AGAGGGAGATTTGTATGTGCTC 57.586 45.455 0.00 0.00 0.00 4.26
587 588 3.126831 GAGGGAGATTTGTATGTGCTCG 58.873 50.000 0.00 0.00 0.00 5.03
588 589 1.599542 GGGAGATTTGTATGTGCTCGC 59.400 52.381 0.00 0.00 0.00 5.03
589 590 2.279741 GGAGATTTGTATGTGCTCGCA 58.720 47.619 0.00 0.00 0.00 5.10
590 591 2.677836 GGAGATTTGTATGTGCTCGCAA 59.322 45.455 0.00 0.00 0.00 4.85
591 592 3.126858 GGAGATTTGTATGTGCTCGCAAA 59.873 43.478 0.00 0.00 35.66 3.68
592 593 4.379394 GGAGATTTGTATGTGCTCGCAAAA 60.379 41.667 0.00 0.00 34.99 2.44
593 594 4.726416 AGATTTGTATGTGCTCGCAAAAG 58.274 39.130 0.00 0.00 34.99 2.27
594 595 2.987413 TTGTATGTGCTCGCAAAAGG 57.013 45.000 0.00 0.00 0.00 3.11
595 596 2.177394 TGTATGTGCTCGCAAAAGGA 57.823 45.000 0.00 0.00 0.00 3.36
596 597 2.499197 TGTATGTGCTCGCAAAAGGAA 58.501 42.857 0.00 0.00 0.00 3.36
597 598 2.881513 TGTATGTGCTCGCAAAAGGAAA 59.118 40.909 0.00 0.00 0.00 3.13
598 599 3.505680 TGTATGTGCTCGCAAAAGGAAAT 59.494 39.130 0.00 0.00 0.00 2.17
599 600 4.697828 TGTATGTGCTCGCAAAAGGAAATA 59.302 37.500 0.00 0.00 0.00 1.40
600 601 4.782019 ATGTGCTCGCAAAAGGAAATAA 57.218 36.364 0.00 0.00 0.00 1.40
601 602 4.782019 TGTGCTCGCAAAAGGAAATAAT 57.218 36.364 0.00 0.00 0.00 1.28
602 603 5.132897 TGTGCTCGCAAAAGGAAATAATT 57.867 34.783 0.00 0.00 0.00 1.40
603 604 5.160641 TGTGCTCGCAAAAGGAAATAATTC 58.839 37.500 0.00 0.00 34.66 2.17
604 605 5.160641 GTGCTCGCAAAAGGAAATAATTCA 58.839 37.500 0.00 0.00 37.29 2.57
605 606 5.060940 GTGCTCGCAAAAGGAAATAATTCAC 59.939 40.000 0.00 0.00 37.29 3.18
606 607 5.048083 TGCTCGCAAAAGGAAATAATTCACT 60.048 36.000 0.00 0.00 37.29 3.41
607 608 6.150307 TGCTCGCAAAAGGAAATAATTCACTA 59.850 34.615 0.00 0.00 37.29 2.74
608 609 7.148086 TGCTCGCAAAAGGAAATAATTCACTAT 60.148 33.333 0.00 0.00 37.29 2.12
609 610 7.702348 GCTCGCAAAAGGAAATAATTCACTATT 59.298 33.333 0.00 0.00 37.29 1.73
610 611 8.909708 TCGCAAAAGGAAATAATTCACTATTG 57.090 30.769 0.00 0.00 37.29 1.90
611 612 8.519526 TCGCAAAAGGAAATAATTCACTATTGT 58.480 29.630 0.00 0.00 37.29 2.71
612 613 9.781834 CGCAAAAGGAAATAATTCACTATTGTA 57.218 29.630 0.00 0.00 37.29 2.41
633 634 8.429237 TTGTAATCTTGTAATTGAATTGGGGT 57.571 30.769 0.00 0.00 0.00 4.95
634 635 7.835822 TGTAATCTTGTAATTGAATTGGGGTG 58.164 34.615 0.00 0.00 0.00 4.61
635 636 4.799564 TCTTGTAATTGAATTGGGGTGC 57.200 40.909 0.00 0.00 0.00 5.01
636 637 3.192422 TCTTGTAATTGAATTGGGGTGCG 59.808 43.478 0.00 0.00 0.00 5.34
637 638 1.821753 TGTAATTGAATTGGGGTGCGG 59.178 47.619 0.00 0.00 0.00 5.69
638 639 1.136110 GTAATTGAATTGGGGTGCGGG 59.864 52.381 0.00 0.00 0.00 6.13
639 640 1.898330 AATTGAATTGGGGTGCGGGC 61.898 55.000 0.00 0.00 0.00 6.13
657 658 2.460330 CCGTGTGGCTTGATCTCAC 58.540 57.895 0.00 0.00 0.00 3.51
658 659 0.036952 CCGTGTGGCTTGATCTCACT 60.037 55.000 0.00 0.00 33.04 3.41
659 660 1.354040 CGTGTGGCTTGATCTCACTC 58.646 55.000 0.00 0.00 33.04 3.51
660 661 1.354040 GTGTGGCTTGATCTCACTCG 58.646 55.000 0.00 0.00 33.04 4.18
661 662 1.067565 GTGTGGCTTGATCTCACTCGA 60.068 52.381 0.00 0.00 33.04 4.04
662 663 1.067565 TGTGGCTTGATCTCACTCGAC 60.068 52.381 0.00 0.00 33.04 4.20
663 664 1.203523 GTGGCTTGATCTCACTCGACT 59.796 52.381 0.00 0.00 0.00 4.18
664 665 1.203287 TGGCTTGATCTCACTCGACTG 59.797 52.381 0.00 0.00 0.00 3.51
665 666 1.474478 GGCTTGATCTCACTCGACTGA 59.526 52.381 0.00 0.00 0.00 3.41
674 675 5.312120 TCTCACTCGACTGAGATTTTACC 57.688 43.478 17.60 0.00 45.57 2.85
675 676 5.010933 TCTCACTCGACTGAGATTTTACCT 58.989 41.667 17.60 0.00 45.57 3.08
676 677 5.124138 TCTCACTCGACTGAGATTTTACCTC 59.876 44.000 17.60 0.00 45.57 3.85
677 678 4.765339 TCACTCGACTGAGATTTTACCTCA 59.235 41.667 0.00 0.00 45.57 3.86
685 686 5.462530 TGAGATTTTACCTCAGTCGACAA 57.537 39.130 19.50 4.29 35.89 3.18
686 687 5.227908 TGAGATTTTACCTCAGTCGACAAC 58.772 41.667 19.50 0.00 35.89 3.32
687 688 5.209818 AGATTTTACCTCAGTCGACAACA 57.790 39.130 19.50 0.00 0.00 3.33
688 689 5.794894 AGATTTTACCTCAGTCGACAACAT 58.205 37.500 19.50 0.25 0.00 2.71
689 690 6.931838 AGATTTTACCTCAGTCGACAACATA 58.068 36.000 19.50 0.38 0.00 2.29
690 691 7.556844 AGATTTTACCTCAGTCGACAACATAT 58.443 34.615 19.50 0.84 0.00 1.78
691 692 8.692710 AGATTTTACCTCAGTCGACAACATATA 58.307 33.333 19.50 0.00 0.00 0.86
692 693 9.309516 GATTTTACCTCAGTCGACAACATATAA 57.690 33.333 19.50 6.25 0.00 0.98
693 694 9.832445 ATTTTACCTCAGTCGACAACATATAAT 57.168 29.630 19.50 7.35 0.00 1.28
826 830 6.305272 TCCTTCTTTGACTCTGCATATTCT 57.695 37.500 0.00 0.00 0.00 2.40
827 831 6.111382 TCCTTCTTTGACTCTGCATATTCTG 58.889 40.000 0.00 0.00 0.00 3.02
828 832 6.070596 TCCTTCTTTGACTCTGCATATTCTGA 60.071 38.462 0.00 0.00 0.00 3.27
829 833 6.258287 CCTTCTTTGACTCTGCATATTCTGAG 59.742 42.308 7.53 7.53 37.83 3.35
830 834 6.535963 TCTTTGACTCTGCATATTCTGAGA 57.464 37.500 14.45 0.01 36.35 3.27
832 836 6.379417 TCTTTGACTCTGCATATTCTGAGAGA 59.621 38.462 14.45 5.60 35.18 3.10
833 837 5.771153 TGACTCTGCATATTCTGAGAGAG 57.229 43.478 14.45 0.00 38.26 3.20
843 847 6.370994 GCATATTCTGAGAGAGAGAGAGAGAG 59.629 46.154 0.00 0.00 30.18 3.20
845 849 5.604758 TTCTGAGAGAGAGAGAGAGAGAG 57.395 47.826 0.00 0.00 30.18 3.20
846 850 4.871822 TCTGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
865 874 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
999 3047 3.739613 ACCGCCAAATCCCTCCCC 61.740 66.667 0.00 0.00 0.00 4.81
1015 3063 0.105964 CCCCATGGCATTGCAGATTG 59.894 55.000 6.09 2.08 0.00 2.67
1016 3064 0.105964 CCCATGGCATTGCAGATTGG 59.894 55.000 6.09 10.51 0.00 3.16
1017 3065 0.531974 CCATGGCATTGCAGATTGGC 60.532 55.000 11.39 11.44 38.77 4.52
1018 3066 0.874175 CATGGCATTGCAGATTGGCG 60.874 55.000 11.39 0.00 41.00 5.69
1019 3067 2.023414 ATGGCATTGCAGATTGGCGG 62.023 55.000 11.39 0.00 41.00 6.13
1020 3068 2.584143 GCATTGCAGATTGGCGGC 60.584 61.111 0.00 0.00 38.26 6.53
1144 3192 4.498520 AGCTGGTCGCGATCGGTG 62.499 66.667 27.86 15.14 45.59 4.94
1145 3193 4.492160 GCTGGTCGCGATCGGTGA 62.492 66.667 27.86 3.33 36.13 4.02
1169 3217 2.997584 CGTCCTCCTCTCCCCTCCA 61.998 68.421 0.00 0.00 0.00 3.86
1170 3218 1.075600 GTCCTCCTCTCCCCTCCAG 60.076 68.421 0.00 0.00 0.00 3.86
1225 3283 4.189231 CCCTTTTCCGGAGTAACAGTATG 58.811 47.826 3.34 0.00 46.00 2.39
1275 3333 1.007238 TGTGGTTTTGGGAACTTGGGA 59.993 47.619 0.00 0.00 0.00 4.37
1321 3379 4.274950 CGTGGTGGAAACTGTTCTGTTTAT 59.725 41.667 7.56 0.00 39.86 1.40
1360 3424 3.406764 GATCAATGGAGCCGCTAGATTT 58.593 45.455 0.00 0.00 0.00 2.17
1384 3452 6.866010 ATTTGGAGGATTTGCTTTGTTTTC 57.134 33.333 0.00 0.00 0.00 2.29
1450 3518 9.031537 AGGGATTTTAACAATTGTTTACCTAGG 57.968 33.333 27.66 7.41 39.31 3.02
1451 3519 7.762615 GGGATTTTAACAATTGTTTACCTAGGC 59.237 37.037 27.66 10.70 39.31 3.93
1473 3593 3.563808 CCTGACCTTTTCGAATTGTGACA 59.436 43.478 0.00 0.00 0.00 3.58
1478 3598 5.901552 ACCTTTTCGAATTGTGACATGTTT 58.098 33.333 0.00 0.00 0.00 2.83
1481 3601 7.010091 ACCTTTTCGAATTGTGACATGTTTTTC 59.990 33.333 0.00 0.00 0.00 2.29
1482 3602 6.489469 TTTCGAATTGTGACATGTTTTTCG 57.511 33.333 16.57 16.57 36.68 3.46
1483 3603 3.971871 TCGAATTGTGACATGTTTTTCGC 59.028 39.130 17.30 6.74 35.67 4.70
1491 3611 4.437820 GTGACATGTTTTTCGCTCTGAAAC 59.562 41.667 0.00 0.00 45.98 2.78
1496 3622 4.411327 TGTTTTTCGCTCTGAAACAACAG 58.589 39.130 10.88 0.00 45.98 3.16
1540 3667 4.762251 GCCATGGTACTCTGTTTTTCTCTT 59.238 41.667 14.67 0.00 0.00 2.85
1650 3777 7.587757 GCTTATATTAGTTGTGAAAGGCATTCG 59.412 37.037 0.00 0.00 41.18 3.34
1709 3849 6.647481 AGTTGTTTTGTTTCAACCTGTTAACC 59.353 34.615 2.48 0.00 43.10 2.85
1719 3859 2.851195 ACCTGTTAACCAGTGCTGAAG 58.149 47.619 2.48 0.00 39.74 3.02
1726 3866 6.237901 TGTTAACCAGTGCTGAAGTCAATAT 58.762 36.000 2.48 0.00 0.00 1.28
1727 3867 7.390823 TGTTAACCAGTGCTGAAGTCAATATA 58.609 34.615 2.48 0.00 0.00 0.86
1728 3868 7.333423 TGTTAACCAGTGCTGAAGTCAATATAC 59.667 37.037 2.48 0.00 0.00 1.47
1734 3874 7.928167 CCAGTGCTGAAGTCAATATACAGATTA 59.072 37.037 0.02 0.00 0.00 1.75
1736 3876 9.890629 AGTGCTGAAGTCAATATACAGATTAAA 57.109 29.630 0.00 0.00 0.00 1.52
1749 3889 5.074746 ACAGATTAAAAGACAAAGGGGGT 57.925 39.130 0.00 0.00 0.00 4.95
1765 3905 4.909284 AGGGGGTCCTTACTTTATGATCT 58.091 43.478 0.00 0.00 41.56 2.75
1766 3906 4.660771 AGGGGGTCCTTACTTTATGATCTG 59.339 45.833 0.00 0.00 41.56 2.90
1767 3907 4.412528 GGGGGTCCTTACTTTATGATCTGT 59.587 45.833 0.00 0.00 0.00 3.41
1771 3911 7.498239 GGGGTCCTTACTTTATGATCTGTTAAC 59.502 40.741 0.00 0.00 0.00 2.01
1772 3912 7.498239 GGGTCCTTACTTTATGATCTGTTAACC 59.502 40.741 2.48 0.00 0.00 2.85
1773 3913 8.265764 GGTCCTTACTTTATGATCTGTTAACCT 58.734 37.037 2.48 0.00 0.00 3.50
1823 4059 5.740838 GCGGTTGCAGAACTTAATTTTAC 57.259 39.130 0.00 0.00 42.15 2.01
1825 4061 5.688176 GCGGTTGCAGAACTTAATTTTACAA 59.312 36.000 0.00 0.00 42.15 2.41
1826 4062 6.364976 GCGGTTGCAGAACTTAATTTTACAAT 59.635 34.615 0.00 0.00 42.15 2.71
1827 4063 7.410407 GCGGTTGCAGAACTTAATTTTACAATC 60.410 37.037 0.00 0.00 42.15 2.67
1828 4064 7.807907 CGGTTGCAGAACTTAATTTTACAATCT 59.192 33.333 0.00 0.00 32.15 2.40
1829 4065 8.915654 GGTTGCAGAACTTAATTTTACAATCTG 58.084 33.333 0.00 0.00 36.89 2.90
1833 4069 8.452989 CAGAACTTAATTTTACAATCTGCCAC 57.547 34.615 0.00 0.00 0.00 5.01
1875 4121 8.397215 ACGGAAGTAACAATGTTTTTGTTAAC 57.603 30.769 3.17 0.00 46.88 2.01
1958 4206 0.321653 AGTGTCAAATGGAGCCCGAC 60.322 55.000 0.00 0.00 0.00 4.79
1977 4227 6.702897 CCCGACGTTTGAGATTCTATTTAAC 58.297 40.000 0.00 0.00 0.00 2.01
2000 4250 7.373617 ACAAAGTCTTTTTCCCCAATACATT 57.626 32.000 0.00 0.00 0.00 2.71
2011 4261 3.129287 CCCCAATACATTGAGTGCTTGTC 59.871 47.826 3.48 0.00 40.14 3.18
2026 4276 5.769662 AGTGCTTGTCTGGATTGTTTATGAA 59.230 36.000 0.00 0.00 0.00 2.57
2028 4278 6.583806 GTGCTTGTCTGGATTGTTTATGAAAG 59.416 38.462 0.00 0.00 0.00 2.62
2029 4279 6.265196 TGCTTGTCTGGATTGTTTATGAAAGT 59.735 34.615 0.00 0.00 0.00 2.66
2030 4280 7.147976 GCTTGTCTGGATTGTTTATGAAAGTT 58.852 34.615 0.00 0.00 0.00 2.66
2031 4281 7.653311 GCTTGTCTGGATTGTTTATGAAAGTTT 59.347 33.333 0.00 0.00 0.00 2.66
2033 4283 9.959749 TTGTCTGGATTGTTTATGAAAGTTTAC 57.040 29.630 0.00 0.00 0.00 2.01
2034 4284 9.126151 TGTCTGGATTGTTTATGAAAGTTTACA 57.874 29.630 0.00 0.00 0.00 2.41
2035 4285 9.612620 GTCTGGATTGTTTATGAAAGTTTACAG 57.387 33.333 0.00 0.00 0.00 2.74
2036 4286 9.567776 TCTGGATTGTTTATGAAAGTTTACAGA 57.432 29.630 0.00 0.00 0.00 3.41
2037 4287 9.612620 CTGGATTGTTTATGAAAGTTTACAGAC 57.387 33.333 0.00 0.00 0.00 3.51
2038 4288 8.286800 TGGATTGTTTATGAAAGTTTACAGACG 58.713 33.333 0.00 0.00 0.00 4.18
2039 4289 7.749126 GGATTGTTTATGAAAGTTTACAGACGG 59.251 37.037 0.00 0.00 0.00 4.79
2040 4290 7.789273 TTGTTTATGAAAGTTTACAGACGGA 57.211 32.000 0.00 0.00 0.00 4.69
2041 4291 7.416154 TGTTTATGAAAGTTTACAGACGGAG 57.584 36.000 0.00 0.00 0.00 4.63
2333 4615 7.236529 AGATTGCATTCTATACCATGGTGAAT 58.763 34.615 28.17 22.59 0.00 2.57
2340 4622 7.864108 TTCTATACCATGGTGAATTCTGTTG 57.136 36.000 28.17 5.68 0.00 3.33
2342 4624 7.402054 TCTATACCATGGTGAATTCTGTTGTT 58.598 34.615 28.17 0.00 0.00 2.83
2355 4637 9.729023 TGAATTCTGTTGTTGTGTTACATTTAG 57.271 29.630 7.05 0.00 0.00 1.85
2356 4638 9.180678 GAATTCTGTTGTTGTGTTACATTTAGG 57.819 33.333 0.00 0.00 0.00 2.69
2357 4639 7.867305 TTCTGTTGTTGTGTTACATTTAGGA 57.133 32.000 0.00 0.00 0.00 2.94
2358 4640 8.458573 TTCTGTTGTTGTGTTACATTTAGGAT 57.541 30.769 0.00 0.00 0.00 3.24
2359 4641 8.094798 TCTGTTGTTGTGTTACATTTAGGATC 57.905 34.615 0.00 0.00 0.00 3.36
2360 4642 7.936847 TCTGTTGTTGTGTTACATTTAGGATCT 59.063 33.333 0.00 0.00 0.00 2.75
2361 4643 8.458573 TGTTGTTGTGTTACATTTAGGATCTT 57.541 30.769 0.00 0.00 0.00 2.40
2362 4644 9.562408 TGTTGTTGTGTTACATTTAGGATCTTA 57.438 29.630 0.00 0.00 0.00 2.10
2397 4680 4.242475 TGATCTAACATGGTTCACACGTC 58.758 43.478 0.00 0.00 0.00 4.34
2401 4684 2.736144 ACATGGTTCACACGTCGTAT 57.264 45.000 0.00 0.00 0.00 3.06
2420 4703 5.128171 TCGTATTTATCTAGTGTTGCCTGGT 59.872 40.000 0.00 0.00 0.00 4.00
2434 4717 1.308069 CCTGGTTGATTGGCTGGTCG 61.308 60.000 0.00 0.00 0.00 4.79
2437 4720 1.072489 TGGTTGATTGGCTGGTCGTTA 59.928 47.619 0.00 0.00 0.00 3.18
2464 4747 3.260884 TGGAATATACTCTTGGCGGATCC 59.739 47.826 0.00 0.00 0.00 3.36
2531 4816 5.237344 TCTTTCTTAGAGCTTTGTTCTGTGC 59.763 40.000 0.00 0.00 0.00 4.57
2538 4823 6.147864 AGAGCTTTGTTCTGTGCAATTTTA 57.852 33.333 0.00 0.00 0.00 1.52
2641 4926 2.176364 ACCAGATAGCTTGCCATGGATT 59.824 45.455 18.40 0.00 0.00 3.01
2695 4980 0.895100 TTGTTGATCCCTGTGCTGCC 60.895 55.000 0.00 0.00 0.00 4.85
2834 5120 6.822667 TTTGAATTTCTTGCAGAGCTCATA 57.177 33.333 17.77 0.00 0.00 2.15
2992 5278 4.427394 GCATACTGCAGAGGGACG 57.573 61.111 23.35 3.39 44.26 4.79
2993 5279 1.517832 GCATACTGCAGAGGGACGT 59.482 57.895 23.35 0.00 44.26 4.34
2994 5280 0.108138 GCATACTGCAGAGGGACGTT 60.108 55.000 23.35 0.00 44.26 3.99
2995 5281 1.676014 GCATACTGCAGAGGGACGTTT 60.676 52.381 23.35 0.00 44.26 3.60
2996 5282 2.699954 CATACTGCAGAGGGACGTTTT 58.300 47.619 23.35 0.00 0.00 2.43
2997 5283 2.922740 TACTGCAGAGGGACGTTTTT 57.077 45.000 23.35 0.00 0.00 1.94
2998 5284 1.594331 ACTGCAGAGGGACGTTTTTC 58.406 50.000 23.35 0.00 0.00 2.29
2999 5285 1.134220 ACTGCAGAGGGACGTTTTTCA 60.134 47.619 23.35 0.00 0.00 2.69
3000 5286 1.264288 CTGCAGAGGGACGTTTTTCAC 59.736 52.381 8.42 0.00 0.00 3.18
3001 5287 1.134220 TGCAGAGGGACGTTTTTCACT 60.134 47.619 0.00 0.00 0.00 3.41
3002 5288 1.264288 GCAGAGGGACGTTTTTCACTG 59.736 52.381 0.00 0.00 0.00 3.66
3003 5289 2.833794 CAGAGGGACGTTTTTCACTGA 58.166 47.619 0.00 0.00 0.00 3.41
3004 5290 3.202906 CAGAGGGACGTTTTTCACTGAA 58.797 45.455 0.00 0.00 0.00 3.02
3005 5291 3.002348 CAGAGGGACGTTTTTCACTGAAC 59.998 47.826 0.00 0.00 0.00 3.18
3006 5292 3.118371 AGAGGGACGTTTTTCACTGAACT 60.118 43.478 0.00 0.00 0.00 3.01
3007 5293 4.100498 AGAGGGACGTTTTTCACTGAACTA 59.900 41.667 0.00 0.00 0.00 2.24
3008 5294 4.124970 AGGGACGTTTTTCACTGAACTAC 58.875 43.478 0.00 0.00 0.00 2.73
3009 5295 4.124970 GGGACGTTTTTCACTGAACTACT 58.875 43.478 0.00 0.00 0.00 2.57
3010 5296 4.573607 GGGACGTTTTTCACTGAACTACTT 59.426 41.667 0.00 0.00 0.00 2.24
3011 5297 5.754890 GGGACGTTTTTCACTGAACTACTTA 59.245 40.000 0.00 0.00 0.00 2.24
3012 5298 6.258507 GGGACGTTTTTCACTGAACTACTTAA 59.741 38.462 0.00 0.00 0.00 1.85
3013 5299 7.201635 GGGACGTTTTTCACTGAACTACTTAAA 60.202 37.037 0.00 0.00 0.00 1.52
3014 5300 7.637519 GGACGTTTTTCACTGAACTACTTAAAC 59.362 37.037 0.00 0.00 0.00 2.01
3015 5301 8.260270 ACGTTTTTCACTGAACTACTTAAACT 57.740 30.769 10.57 0.47 0.00 2.66
3016 5302 8.724229 ACGTTTTTCACTGAACTACTTAAACTT 58.276 29.630 10.57 2.36 0.00 2.66
3017 5303 9.550811 CGTTTTTCACTGAACTACTTAAACTTT 57.449 29.630 10.57 0.00 0.00 2.66
3254 5541 6.721571 TGATTTTACTTTGATCGACAGGTC 57.278 37.500 0.00 0.00 0.00 3.85
3260 5547 4.899502 ACTTTGATCGACAGGTCAAGAAT 58.100 39.130 0.00 0.00 35.91 2.40
3365 5652 3.018149 TGGGATTGTACCGTATTTTGCC 58.982 45.455 0.00 0.00 0.00 4.52
3451 5738 9.063615 GTAAGGACTCAATTCTCCTTTTGTTTA 57.936 33.333 11.96 0.00 43.24 2.01
3476 5763 4.214971 GCTGTTGGCTATAATGGTCATCTG 59.785 45.833 0.00 0.00 38.06 2.90
3478 5765 4.165950 TGTTGGCTATAATGGTCATCTGGT 59.834 41.667 0.00 0.00 0.00 4.00
3485 5772 2.119801 ATGGTCATCTGGTGTGCTTC 57.880 50.000 0.00 0.00 0.00 3.86
3498 5785 5.316167 TGGTGTGCTTCTGACTGAATTATT 58.684 37.500 0.00 0.00 33.71 1.40
3503 5790 7.331934 GTGTGCTTCTGACTGAATTATTCACTA 59.668 37.037 3.20 0.00 35.46 2.74
3603 5903 1.255342 CAAACACGTCACTGTGACTCG 59.745 52.381 31.34 24.78 44.85 4.18
3627 5927 7.701078 TCGAACTTGTGATAATTAGCAGTCTAC 59.299 37.037 3.09 0.00 0.00 2.59
3636 5937 1.382522 TAGCAGTCTACCCCGTAACG 58.617 55.000 0.00 0.00 0.00 3.18
3669 5970 3.771577 AGAATTTCCATACTAGGGGCG 57.228 47.619 0.00 0.00 0.00 6.13
3910 6211 1.203287 GCTCTGGCCTTTTTCATGGAC 59.797 52.381 3.32 0.00 0.00 4.02
3939 6240 3.441572 CAGTTGGCAGGAATGGTAAGAAG 59.558 47.826 0.00 0.00 0.00 2.85
3983 6286 5.655974 TGCATACTTTGATTTGATGGCCTTA 59.344 36.000 3.32 0.00 0.00 2.69
3986 6289 5.649782 ACTTTGATTTGATGGCCTTACAG 57.350 39.130 3.32 0.00 0.00 2.74
3991 6294 3.500448 TTTGATGGCCTTACAGACACA 57.500 42.857 3.32 0.00 0.00 3.72
4099 6403 3.190079 CACACTCCTATCGTTCACCATG 58.810 50.000 0.00 0.00 0.00 3.66
4174 6478 1.101635 TACCATCACCTCGGCGAGAG 61.102 60.000 36.47 26.87 46.44 3.20
4188 6492 1.734465 GCGAGAGTCAATGGGTTTGAG 59.266 52.381 0.00 0.00 44.89 3.02
4353 6657 7.324616 CACAGTTGCTTTCAGATTTAAACTAGC 59.675 37.037 0.00 0.00 0.00 3.42
4354 6658 7.229506 ACAGTTGCTTTCAGATTTAAACTAGCT 59.770 33.333 0.00 0.00 0.00 3.32
4357 6661 7.133891 TGCTTTCAGATTTAAACTAGCTGTC 57.866 36.000 0.00 0.00 0.00 3.51
4413 6720 4.191544 CGGAAGCTAACCAAGATGAATGA 58.808 43.478 9.92 0.00 0.00 2.57
4463 6770 0.103026 TGGATGAGATGAAGCGTCGG 59.897 55.000 0.00 0.00 0.00 4.79
4674 6981 5.288543 GCAGCAGCATCTATAATTGTACC 57.711 43.478 0.00 0.00 41.58 3.34
4678 6985 5.696724 AGCAGCATCTATAATTGTACCGTTC 59.303 40.000 0.00 0.00 0.00 3.95
4752 7059 1.269448 CTACCGCTTTGCATTGGTTGT 59.731 47.619 5.20 0.00 35.93 3.32
4871 7178 6.980397 ACATTAAACTGCTTGTCCTTTTCTTG 59.020 34.615 0.00 0.00 0.00 3.02
5091 7403 7.599621 CCAGAAAGCACAATCATTTTCATTGTA 59.400 33.333 0.00 0.00 41.58 2.41
5146 7458 2.814805 ATGGCTGCTGATAGGTGTTT 57.185 45.000 0.00 0.00 0.00 2.83
5149 7461 2.224744 TGGCTGCTGATAGGTGTTTTCA 60.225 45.455 0.00 0.00 0.00 2.69
5284 7596 0.742281 CCGTCACATCTTGGAGCTGG 60.742 60.000 0.00 0.00 0.00 4.85
5296 7608 1.968540 GAGCTGGCAAAACCTCGCT 60.969 57.895 0.00 0.00 44.96 4.93
5355 7677 0.321346 GGGCCTGTTGAATTGTTGGG 59.679 55.000 0.84 0.00 0.00 4.12
5356 7678 1.337118 GGCCTGTTGAATTGTTGGGA 58.663 50.000 0.00 0.00 0.00 4.37
5357 7679 1.273327 GGCCTGTTGAATTGTTGGGAG 59.727 52.381 0.00 0.00 0.00 4.30
5358 7680 1.337167 GCCTGTTGAATTGTTGGGAGC 60.337 52.381 0.00 0.00 0.00 4.70
5360 7682 2.629617 CCTGTTGAATTGTTGGGAGCTT 59.370 45.455 0.00 0.00 0.00 3.74
5361 7683 3.826157 CCTGTTGAATTGTTGGGAGCTTA 59.174 43.478 0.00 0.00 0.00 3.09
5366 7688 3.244422 TGAATTGTTGGGAGCTTAGTCGT 60.244 43.478 0.00 0.00 0.00 4.34
5368 7690 0.242825 TGTTGGGAGCTTAGTCGTCG 59.757 55.000 0.00 0.00 0.00 5.12
5385 7707 2.417379 CGTCGACAGGGTCTCATTGATT 60.417 50.000 17.16 0.00 0.00 2.57
5394 7716 6.154445 CAGGGTCTCATTGATTCAGTTTTTG 58.846 40.000 0.00 0.00 0.00 2.44
5502 7832 4.577988 TGTATAAGCAAGCCCCTTGTAA 57.422 40.909 6.80 0.00 42.77 2.41
5575 7905 5.336150 TGCAACAGAAACCATTCTTTCAA 57.664 34.783 0.00 0.00 43.43 2.69
5639 7973 9.820725 ATATATATGTGCATTTGCTGTTTTGTT 57.179 25.926 3.94 0.00 42.66 2.83
5742 8076 3.921021 CACTGCTAGCTACAGTACAACAC 59.079 47.826 21.05 0.00 46.44 3.32
5782 8128 4.098807 AGTTCAACCACGGCAAGTATTTTT 59.901 37.500 0.00 0.00 0.00 1.94
5820 8166 7.489574 ACAACAGAAACAAAAACACAAACAT 57.510 28.000 0.00 0.00 0.00 2.71
5850 8196 3.118592 AGCTAGTACTCCTTGGTGAATGC 60.119 47.826 0.00 0.00 0.00 3.56
5908 8257 1.446272 CGCTCTCTCGGGTTGGAAC 60.446 63.158 0.00 0.00 0.00 3.62
5959 8308 2.593956 GGCGAAGGTGAACCCTCCT 61.594 63.158 0.00 0.00 45.47 3.69
5992 8341 1.152312 ATAGCCCCCTACCTCGTGG 60.152 63.158 0.99 0.99 39.83 4.94
6022 8371 1.337384 ATGGACGCCATGGCTCTGTA 61.337 55.000 33.07 16.31 43.39 2.74
6041 8390 2.156051 AACGGAGAGGTTGAGGTCGC 62.156 60.000 0.00 0.00 0.00 5.19
6076 8425 3.361977 CCGGTGAAGGGGCAAACG 61.362 66.667 0.00 0.00 0.00 3.60
6091 8440 0.390735 AAACGGAGTCGAAATCCCCG 60.391 55.000 11.36 10.43 45.00 5.73
6141 8490 2.757868 CAACAAGAACCAAAGTGTCCCA 59.242 45.455 0.00 0.00 0.00 4.37
6156 8505 2.173143 TGTCCCAAGCTCATATGCATCA 59.827 45.455 0.19 0.00 34.99 3.07
6160 8509 5.651139 GTCCCAAGCTCATATGCATCATAAT 59.349 40.000 0.19 0.00 34.99 1.28
6167 8516 7.817641 AGCTCATATGCATCATAATTTGTCTG 58.182 34.615 0.19 0.00 34.99 3.51
6172 8521 6.971726 ATGCATCATAATTTGTCTGATGGT 57.028 33.333 12.23 0.00 44.08 3.55
6174 8523 6.124340 TGCATCATAATTTGTCTGATGGTCT 58.876 36.000 12.23 0.00 44.08 3.85
6175 8524 6.038936 TGCATCATAATTTGTCTGATGGTCTG 59.961 38.462 12.23 2.27 44.08 3.51
6176 8525 6.039047 GCATCATAATTTGTCTGATGGTCTGT 59.961 38.462 12.23 0.00 44.08 3.41
6177 8526 7.637229 CATCATAATTTGTCTGATGGTCTGTC 58.363 38.462 4.27 0.00 41.53 3.51
6178 8527 5.812127 TCATAATTTGTCTGATGGTCTGTCG 59.188 40.000 0.00 0.00 0.00 4.35
6179 8528 3.685139 ATTTGTCTGATGGTCTGTCGT 57.315 42.857 0.00 0.00 0.00 4.34
6180 8529 2.724977 TTGTCTGATGGTCTGTCGTC 57.275 50.000 0.00 0.00 0.00 4.20
6181 8530 1.616159 TGTCTGATGGTCTGTCGTCA 58.384 50.000 0.00 0.00 0.00 4.35
6182 8531 1.960689 TGTCTGATGGTCTGTCGTCAA 59.039 47.619 0.00 0.00 32.93 3.18
6183 8532 2.029918 TGTCTGATGGTCTGTCGTCAAG 60.030 50.000 0.00 0.00 32.93 3.02
6184 8533 2.229062 GTCTGATGGTCTGTCGTCAAGA 59.771 50.000 0.00 0.00 32.93 3.02
6185 8534 2.890945 TCTGATGGTCTGTCGTCAAGAA 59.109 45.455 0.00 0.00 32.93 2.52
6186 8535 3.057245 TCTGATGGTCTGTCGTCAAGAAG 60.057 47.826 0.00 0.00 32.93 2.85
6187 8536 2.029020 TGATGGTCTGTCGTCAAGAAGG 60.029 50.000 0.00 0.00 30.56 3.46
6188 8537 1.410004 TGGTCTGTCGTCAAGAAGGT 58.590 50.000 0.00 0.00 0.00 3.50
6189 8538 1.068588 TGGTCTGTCGTCAAGAAGGTG 59.931 52.381 0.00 0.00 0.00 4.00
6190 8539 1.605712 GGTCTGTCGTCAAGAAGGTGG 60.606 57.143 0.00 0.00 0.00 4.61
6191 8540 1.340248 GTCTGTCGTCAAGAAGGTGGA 59.660 52.381 0.00 0.00 0.00 4.02
6192 8541 1.613925 TCTGTCGTCAAGAAGGTGGAG 59.386 52.381 0.00 0.00 0.00 3.86
6229 8578 1.377987 GGCAGGCCGTGGTCAATTA 60.378 57.895 0.00 0.00 0.00 1.40
6240 8589 3.119990 CGTGGTCAATTAGCCGTTTCAAT 60.120 43.478 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.050377 TCTTTATTTGGTCCATTGTGCAAAAA 58.950 30.769 0.00 0.00 0.00 1.94
7 8 6.586344 TCTTTATTTGGTCCATTGTGCAAAA 58.414 32.000 0.00 0.00 0.00 2.44
8 9 6.166984 TCTTTATTTGGTCCATTGTGCAAA 57.833 33.333 0.00 0.00 0.00 3.68
9 10 5.798125 TCTTTATTTGGTCCATTGTGCAA 57.202 34.783 0.00 0.00 0.00 4.08
10 11 5.798125 TTCTTTATTTGGTCCATTGTGCA 57.202 34.783 0.00 0.00 0.00 4.57
11 12 7.489574 TTTTTCTTTATTTGGTCCATTGTGC 57.510 32.000 0.00 0.00 0.00 4.57
35 36 3.064271 ACACAACGTCGTGCTGTATTTTT 59.936 39.130 6.53 0.00 40.73 1.94
36 37 2.610374 ACACAACGTCGTGCTGTATTTT 59.390 40.909 6.53 0.00 40.73 1.82
37 38 2.206750 ACACAACGTCGTGCTGTATTT 58.793 42.857 6.53 0.00 40.73 1.40
38 39 1.860676 ACACAACGTCGTGCTGTATT 58.139 45.000 6.53 0.00 40.73 1.89
39 40 1.860676 AACACAACGTCGTGCTGTAT 58.139 45.000 6.53 0.00 40.73 2.29
40 41 1.642728 AAACACAACGTCGTGCTGTA 58.357 45.000 6.53 0.00 40.73 2.74
41 42 0.800012 AAAACACAACGTCGTGCTGT 59.200 45.000 6.53 0.00 40.73 4.40
42 43 1.837747 GAAAAACACAACGTCGTGCTG 59.162 47.619 6.53 0.00 40.73 4.41
43 44 1.528198 CGAAAAACACAACGTCGTGCT 60.528 47.619 6.53 0.00 40.73 4.40
44 45 0.828959 CGAAAAACACAACGTCGTGC 59.171 50.000 6.53 0.00 40.73 5.34
45 46 2.088449 GACGAAAAACACAACGTCGTG 58.912 47.619 4.78 4.78 44.36 4.35
46 47 2.424380 GACGAAAAACACAACGTCGT 57.576 45.000 0.00 0.00 46.77 4.34
49 50 2.743126 TCAAGGACGAAAAACACAACGT 59.257 40.909 0.00 0.00 41.57 3.99
50 51 3.095738 GTCAAGGACGAAAAACACAACG 58.904 45.455 0.00 0.00 0.00 4.10
51 52 4.086199 TGTCAAGGACGAAAAACACAAC 57.914 40.909 0.00 0.00 34.95 3.32
52 53 4.768130 TTGTCAAGGACGAAAAACACAA 57.232 36.364 0.00 0.00 34.95 3.33
53 54 4.768130 TTTGTCAAGGACGAAAAACACA 57.232 36.364 0.00 0.00 33.56 3.72
59 60 9.640963 TTTTCTTTATTTTTGTCAAGGACGAAA 57.359 25.926 7.51 7.51 42.15 3.46
60 61 9.640963 TTTTTCTTTATTTTTGTCAAGGACGAA 57.359 25.926 0.00 0.00 34.54 3.85
61 62 9.810545 ATTTTTCTTTATTTTTGTCAAGGACGA 57.189 25.926 0.00 0.00 34.95 4.20
109 110 5.576384 GTCAAGATGTTTCACTGTGCAAAAA 59.424 36.000 2.12 1.01 0.00 1.94
110 111 5.101628 GTCAAGATGTTTCACTGTGCAAAA 58.898 37.500 2.12 0.00 0.00 2.44
111 112 4.671377 GTCAAGATGTTTCACTGTGCAAA 58.329 39.130 2.12 2.45 0.00 3.68
112 113 3.242706 CGTCAAGATGTTTCACTGTGCAA 60.243 43.478 2.12 0.00 0.00 4.08
113 114 2.287644 CGTCAAGATGTTTCACTGTGCA 59.712 45.455 2.12 0.00 0.00 4.57
114 115 2.543848 TCGTCAAGATGTTTCACTGTGC 59.456 45.455 2.12 0.00 0.00 4.57
115 116 4.794248 TTCGTCAAGATGTTTCACTGTG 57.206 40.909 0.17 0.17 0.00 3.66
116 117 5.811399 TTTTCGTCAAGATGTTTCACTGT 57.189 34.783 0.00 0.00 0.00 3.55
117 118 7.684062 AATTTTTCGTCAAGATGTTTCACTG 57.316 32.000 0.00 0.00 0.00 3.66
118 119 7.973388 TGAAATTTTTCGTCAAGATGTTTCACT 59.027 29.630 0.00 0.00 40.01 3.41
119 120 8.114359 TGAAATTTTTCGTCAAGATGTTTCAC 57.886 30.769 0.00 0.00 40.01 3.18
120 121 8.870160 ATGAAATTTTTCGTCAAGATGTTTCA 57.130 26.923 0.00 0.00 40.01 2.69
144 145 9.374838 GCCTTGTGATCTGAAAAATCAATTTAT 57.625 29.630 0.00 0.00 35.04 1.40
145 146 8.366401 TGCCTTGTGATCTGAAAAATCAATTTA 58.634 29.630 0.00 0.00 35.04 1.40
146 147 7.172019 GTGCCTTGTGATCTGAAAAATCAATTT 59.828 33.333 0.00 0.00 35.04 1.82
147 148 6.647895 GTGCCTTGTGATCTGAAAAATCAATT 59.352 34.615 0.00 0.00 35.04 2.32
148 149 6.161381 GTGCCTTGTGATCTGAAAAATCAAT 58.839 36.000 0.00 0.00 35.04 2.57
149 150 5.068855 TGTGCCTTGTGATCTGAAAAATCAA 59.931 36.000 0.00 0.00 35.04 2.57
150 151 4.583907 TGTGCCTTGTGATCTGAAAAATCA 59.416 37.500 0.00 0.00 0.00 2.57
151 152 5.125100 TGTGCCTTGTGATCTGAAAAATC 57.875 39.130 0.00 0.00 0.00 2.17
152 153 5.475719 CATGTGCCTTGTGATCTGAAAAAT 58.524 37.500 0.00 0.00 0.00 1.82
153 154 4.262121 CCATGTGCCTTGTGATCTGAAAAA 60.262 41.667 0.00 0.00 0.00 1.94
154 155 3.256383 CCATGTGCCTTGTGATCTGAAAA 59.744 43.478 0.00 0.00 0.00 2.29
155 156 2.821378 CCATGTGCCTTGTGATCTGAAA 59.179 45.455 0.00 0.00 0.00 2.69
156 157 2.224843 ACCATGTGCCTTGTGATCTGAA 60.225 45.455 0.00 0.00 0.00 3.02
157 158 1.352017 ACCATGTGCCTTGTGATCTGA 59.648 47.619 0.00 0.00 0.00 3.27
158 159 1.830279 ACCATGTGCCTTGTGATCTG 58.170 50.000 0.00 0.00 0.00 2.90
159 160 2.592102 AACCATGTGCCTTGTGATCT 57.408 45.000 0.00 0.00 0.00 2.75
160 161 3.665745 AAAACCATGTGCCTTGTGATC 57.334 42.857 0.00 0.00 0.00 2.92
161 162 5.245751 TGATTAAAACCATGTGCCTTGTGAT 59.754 36.000 0.00 0.00 0.00 3.06
162 163 4.586421 TGATTAAAACCATGTGCCTTGTGA 59.414 37.500 0.00 0.00 0.00 3.58
163 164 4.880759 TGATTAAAACCATGTGCCTTGTG 58.119 39.130 0.00 0.00 0.00 3.33
164 165 5.743636 ATGATTAAAACCATGTGCCTTGT 57.256 34.783 0.00 0.00 0.00 3.16
165 166 6.042143 GGTATGATTAAAACCATGTGCCTTG 58.958 40.000 0.00 0.00 33.28 3.61
166 167 5.719085 TGGTATGATTAAAACCATGTGCCTT 59.281 36.000 0.00 0.00 38.36 4.35
167 168 5.268387 TGGTATGATTAAAACCATGTGCCT 58.732 37.500 0.00 0.00 38.36 4.75
168 169 5.590530 TGGTATGATTAAAACCATGTGCC 57.409 39.130 0.00 0.00 38.36 5.01
214 215 8.190784 GCCATGCTACTTTATAAAACAGTCATT 58.809 33.333 0.00 0.00 0.00 2.57
215 216 7.339212 TGCCATGCTACTTTATAAAACAGTCAT 59.661 33.333 0.00 5.14 0.00 3.06
216 217 6.657117 TGCCATGCTACTTTATAAAACAGTCA 59.343 34.615 0.00 3.37 0.00 3.41
217 218 7.083875 TGCCATGCTACTTTATAAAACAGTC 57.916 36.000 0.00 0.00 0.00 3.51
218 219 7.645058 ATGCCATGCTACTTTATAAAACAGT 57.355 32.000 0.00 0.00 0.00 3.55
219 220 8.931385 AAATGCCATGCTACTTTATAAAACAG 57.069 30.769 0.00 1.01 0.00 3.16
220 221 9.717942 AAAAATGCCATGCTACTTTATAAAACA 57.282 25.926 0.00 0.00 0.00 2.83
273 274 9.840427 CGGAAAACAGAGAAAACATAAATGTAT 57.160 29.630 0.00 0.00 40.80 2.29
274 275 8.842280 ACGGAAAACAGAGAAAACATAAATGTA 58.158 29.630 0.00 0.00 40.80 2.29
275 276 7.712797 ACGGAAAACAGAGAAAACATAAATGT 58.287 30.769 0.00 0.00 44.20 2.71
276 277 9.672086 TTACGGAAAACAGAGAAAACATAAATG 57.328 29.630 0.00 0.00 0.00 2.32
277 278 9.893305 CTTACGGAAAACAGAGAAAACATAAAT 57.107 29.630 0.00 0.00 0.00 1.40
278 279 9.111613 TCTTACGGAAAACAGAGAAAACATAAA 57.888 29.630 0.00 0.00 0.00 1.40
279 280 8.665643 TCTTACGGAAAACAGAGAAAACATAA 57.334 30.769 0.00 0.00 0.00 1.90
280 281 8.665643 TTCTTACGGAAAACAGAGAAAACATA 57.334 30.769 0.00 0.00 0.00 2.29
281 282 7.562454 TTCTTACGGAAAACAGAGAAAACAT 57.438 32.000 0.00 0.00 0.00 2.71
282 283 6.988622 TTCTTACGGAAAACAGAGAAAACA 57.011 33.333 0.00 0.00 0.00 2.83
283 284 8.851960 AAATTCTTACGGAAAACAGAGAAAAC 57.148 30.769 0.00 0.00 37.49 2.43
284 285 9.863845 AAAAATTCTTACGGAAAACAGAGAAAA 57.136 25.926 0.00 0.00 37.49 2.29
285 286 9.296400 CAAAAATTCTTACGGAAAACAGAGAAA 57.704 29.630 0.00 0.00 37.49 2.52
286 287 8.463607 ACAAAAATTCTTACGGAAAACAGAGAA 58.536 29.630 0.00 0.00 37.49 2.87
287 288 7.992008 ACAAAAATTCTTACGGAAAACAGAGA 58.008 30.769 0.00 0.00 37.49 3.10
288 289 8.531530 CAACAAAAATTCTTACGGAAAACAGAG 58.468 33.333 0.00 0.00 37.49 3.35
289 290 8.030106 ACAACAAAAATTCTTACGGAAAACAGA 58.970 29.630 0.00 0.00 37.49 3.41
290 291 8.180317 ACAACAAAAATTCTTACGGAAAACAG 57.820 30.769 0.00 0.00 37.49 3.16
291 292 8.535690 AACAACAAAAATTCTTACGGAAAACA 57.464 26.923 0.00 0.00 37.49 2.83
292 293 8.648968 TGAACAACAAAAATTCTTACGGAAAAC 58.351 29.630 0.00 0.00 37.49 2.43
293 294 8.758633 TGAACAACAAAAATTCTTACGGAAAA 57.241 26.923 0.00 0.00 37.49 2.29
294 295 8.812329 CATGAACAACAAAAATTCTTACGGAAA 58.188 29.630 0.00 0.00 37.49 3.13
295 296 7.436673 CCATGAACAACAAAAATTCTTACGGAA 59.563 33.333 0.00 0.00 38.41 4.30
296 297 6.920758 CCATGAACAACAAAAATTCTTACGGA 59.079 34.615 0.00 0.00 0.00 4.69
297 298 6.346518 GCCATGAACAACAAAAATTCTTACGG 60.347 38.462 0.00 0.00 0.00 4.02
298 299 6.199908 TGCCATGAACAACAAAAATTCTTACG 59.800 34.615 0.00 0.00 0.00 3.18
299 300 7.475771 TGCCATGAACAACAAAAATTCTTAC 57.524 32.000 0.00 0.00 0.00 2.34
300 301 8.674263 ATTGCCATGAACAACAAAAATTCTTA 57.326 26.923 0.00 0.00 0.00 2.10
301 302 6.998968 TTGCCATGAACAACAAAAATTCTT 57.001 29.167 0.00 0.00 0.00 2.52
302 303 7.571080 AATTGCCATGAACAACAAAAATTCT 57.429 28.000 0.00 0.00 0.00 2.40
305 306 9.499479 TGTATAATTGCCATGAACAACAAAAAT 57.501 25.926 0.00 0.00 0.00 1.82
306 307 8.893219 TGTATAATTGCCATGAACAACAAAAA 57.107 26.923 0.00 0.00 0.00 1.94
307 308 9.499479 AATGTATAATTGCCATGAACAACAAAA 57.501 25.926 0.00 0.00 0.00 2.44
308 309 9.499479 AAATGTATAATTGCCATGAACAACAAA 57.501 25.926 0.00 0.00 0.00 2.83
391 392 6.429078 GTCCGGAGACCTAGTTTAATGTTTTT 59.571 38.462 3.06 0.00 37.00 1.94
392 393 5.936372 GTCCGGAGACCTAGTTTAATGTTTT 59.064 40.000 3.06 0.00 37.00 2.43
393 394 5.485620 GTCCGGAGACCTAGTTTAATGTTT 58.514 41.667 3.06 0.00 37.00 2.83
394 395 5.082251 GTCCGGAGACCTAGTTTAATGTT 57.918 43.478 3.06 0.00 37.00 2.71
395 396 4.732672 GTCCGGAGACCTAGTTTAATGT 57.267 45.455 3.06 0.00 37.00 2.71
407 408 2.590092 CCCCATTGGTCCGGAGAC 59.410 66.667 3.06 0.62 42.73 3.36
423 424 3.862991 GGAGGGCTAGGGCGAACC 61.863 72.222 0.00 0.00 39.81 3.62
424 425 3.862991 GGGAGGGCTAGGGCGAAC 61.863 72.222 0.00 0.00 39.81 3.95
428 429 4.499116 TCAGGGGAGGGCTAGGGC 62.499 72.222 0.00 0.00 37.82 5.19
429 430 2.446802 GTCAGGGGAGGGCTAGGG 60.447 72.222 0.00 0.00 0.00 3.53
430 431 2.840102 CGTCAGGGGAGGGCTAGG 60.840 72.222 0.00 0.00 0.00 3.02
431 432 1.381327 TTCGTCAGGGGAGGGCTAG 60.381 63.158 0.00 0.00 0.00 3.42
432 433 1.684734 GTTCGTCAGGGGAGGGCTA 60.685 63.158 0.00 0.00 0.00 3.93
433 434 3.003763 GTTCGTCAGGGGAGGGCT 61.004 66.667 0.00 0.00 0.00 5.19
434 435 2.198304 ATTGTTCGTCAGGGGAGGGC 62.198 60.000 0.00 0.00 0.00 5.19
435 436 0.107654 GATTGTTCGTCAGGGGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
436 437 0.460284 CGATTGTTCGTCAGGGGAGG 60.460 60.000 0.00 0.00 40.53 4.30
437 438 0.530744 TCGATTGTTCGTCAGGGGAG 59.469 55.000 0.00 0.00 45.65 4.30
438 439 0.530744 CTCGATTGTTCGTCAGGGGA 59.469 55.000 0.00 0.00 45.65 4.81
439 440 0.460284 CCTCGATTGTTCGTCAGGGG 60.460 60.000 0.00 0.00 45.65 4.79
440 441 0.460284 CCCTCGATTGTTCGTCAGGG 60.460 60.000 7.51 7.51 46.83 4.45
441 442 0.530744 TCCCTCGATTGTTCGTCAGG 59.469 55.000 0.00 0.00 45.65 3.86
442 443 1.469940 CCTCCCTCGATTGTTCGTCAG 60.470 57.143 0.00 0.00 45.65 3.51
443 444 0.530744 CCTCCCTCGATTGTTCGTCA 59.469 55.000 0.00 0.00 45.65 4.35
444 445 0.806492 GCCTCCCTCGATTGTTCGTC 60.806 60.000 0.00 0.00 45.65 4.20
445 446 1.218316 GCCTCCCTCGATTGTTCGT 59.782 57.895 0.00 0.00 45.65 3.85
446 447 0.391130 TTGCCTCCCTCGATTGTTCG 60.391 55.000 0.00 0.00 46.87 3.95
447 448 1.821216 TTTGCCTCCCTCGATTGTTC 58.179 50.000 0.00 0.00 0.00 3.18
448 449 1.886542 GTTTTGCCTCCCTCGATTGTT 59.113 47.619 0.00 0.00 0.00 2.83
449 450 1.534729 GTTTTGCCTCCCTCGATTGT 58.465 50.000 0.00 0.00 0.00 2.71
450 451 0.447801 CGTTTTGCCTCCCTCGATTG 59.552 55.000 0.00 0.00 0.00 2.67
451 452 0.036306 ACGTTTTGCCTCCCTCGATT 59.964 50.000 0.00 0.00 0.00 3.34
452 453 0.036306 AACGTTTTGCCTCCCTCGAT 59.964 50.000 0.00 0.00 0.00 3.59
453 454 0.601841 GAACGTTTTGCCTCCCTCGA 60.602 55.000 0.46 0.00 0.00 4.04
454 455 1.866925 GAACGTTTTGCCTCCCTCG 59.133 57.895 0.46 0.00 0.00 4.63
455 456 1.866925 CGAACGTTTTGCCTCCCTC 59.133 57.895 0.46 0.00 0.00 4.30
456 457 2.258726 GCGAACGTTTTGCCTCCCT 61.259 57.895 13.65 0.00 33.83 4.20
457 458 2.254350 GCGAACGTTTTGCCTCCC 59.746 61.111 13.65 0.00 33.83 4.30
458 459 1.082104 CAGCGAACGTTTTGCCTCC 60.082 57.895 19.05 0.00 41.10 4.30
459 460 1.082104 CCAGCGAACGTTTTGCCTC 60.082 57.895 19.05 0.00 41.10 4.70
460 461 2.551912 CCCAGCGAACGTTTTGCCT 61.552 57.895 19.05 7.44 41.10 4.75
461 462 2.050442 CCCAGCGAACGTTTTGCC 60.050 61.111 19.05 0.00 41.10 4.52
462 463 1.082104 CTCCCAGCGAACGTTTTGC 60.082 57.895 16.06 16.06 40.48 3.68
463 464 1.082104 GCTCCCAGCGAACGTTTTG 60.082 57.895 0.46 0.00 0.00 2.44
464 465 3.340789 GCTCCCAGCGAACGTTTT 58.659 55.556 0.46 0.00 0.00 2.43
478 479 4.087892 TTCGCCAGGGAGCAGCTC 62.088 66.667 14.69 14.69 0.00 4.09
479 480 4.400961 GTTCGCCAGGGAGCAGCT 62.401 66.667 0.00 0.00 0.00 4.24
481 482 3.376935 ATCGTTCGCCAGGGAGCAG 62.377 63.158 0.00 0.00 0.00 4.24
482 483 3.371097 GATCGTTCGCCAGGGAGCA 62.371 63.158 0.00 0.00 0.00 4.26
483 484 2.586357 GATCGTTCGCCAGGGAGC 60.586 66.667 0.00 0.00 0.00 4.70
484 485 2.278857 CGATCGTTCGCCAGGGAG 60.279 66.667 7.03 0.00 38.75 4.30
497 498 1.949631 GGCGACCGATCCAACGATC 60.950 63.158 0.00 0.00 41.43 3.69
498 499 2.106332 GGCGACCGATCCAACGAT 59.894 61.111 0.00 0.00 35.09 3.73
499 500 3.350909 CTGGCGACCGATCCAACGA 62.351 63.158 0.00 0.00 35.09 3.85
500 501 2.629050 ATCTGGCGACCGATCCAACG 62.629 60.000 0.00 0.00 30.98 4.10
501 502 0.387929 TATCTGGCGACCGATCCAAC 59.612 55.000 0.00 0.00 30.98 3.77
502 503 1.338107 ATATCTGGCGACCGATCCAA 58.662 50.000 0.00 0.00 30.98 3.53
503 504 1.338107 AATATCTGGCGACCGATCCA 58.662 50.000 0.00 0.00 0.00 3.41
504 505 2.753452 TCTAATATCTGGCGACCGATCC 59.247 50.000 0.00 0.00 0.00 3.36
505 506 3.440872 ACTCTAATATCTGGCGACCGATC 59.559 47.826 0.00 0.00 0.00 3.69
506 507 3.422796 ACTCTAATATCTGGCGACCGAT 58.577 45.455 0.00 0.00 0.00 4.18
507 508 2.812591 GACTCTAATATCTGGCGACCGA 59.187 50.000 0.00 0.00 0.00 4.69
508 509 2.095161 GGACTCTAATATCTGGCGACCG 60.095 54.545 0.00 0.00 0.00 4.79
509 510 3.158676 AGGACTCTAATATCTGGCGACC 58.841 50.000 0.00 0.00 0.00 4.79
510 511 4.857509 AAGGACTCTAATATCTGGCGAC 57.142 45.455 0.00 0.00 0.00 5.19
511 512 8.645814 TTTATAAGGACTCTAATATCTGGCGA 57.354 34.615 0.00 0.00 0.00 5.54
512 513 9.706691 TTTTTATAAGGACTCTAATATCTGGCG 57.293 33.333 0.00 0.00 0.00 5.69
535 536 5.124936 GCGGGAGGAGTACATACAAATTTTT 59.875 40.000 0.00 0.00 0.00 1.94
536 537 4.638865 GCGGGAGGAGTACATACAAATTTT 59.361 41.667 0.00 0.00 0.00 1.82
537 538 4.196971 GCGGGAGGAGTACATACAAATTT 58.803 43.478 0.00 0.00 0.00 1.82
538 539 3.199071 TGCGGGAGGAGTACATACAAATT 59.801 43.478 0.00 0.00 0.00 1.82
539 540 2.769663 TGCGGGAGGAGTACATACAAAT 59.230 45.455 0.00 0.00 0.00 2.32
540 541 2.181125 TGCGGGAGGAGTACATACAAA 58.819 47.619 0.00 0.00 0.00 2.83
541 542 1.855295 TGCGGGAGGAGTACATACAA 58.145 50.000 0.00 0.00 0.00 2.41
542 543 2.082140 ATGCGGGAGGAGTACATACA 57.918 50.000 0.00 0.00 0.00 2.29
543 544 4.595762 TTTATGCGGGAGGAGTACATAC 57.404 45.455 0.00 0.00 0.00 2.39
544 545 4.897076 TCTTTTATGCGGGAGGAGTACATA 59.103 41.667 0.00 0.00 0.00 2.29
545 546 3.709653 TCTTTTATGCGGGAGGAGTACAT 59.290 43.478 0.00 0.00 0.00 2.29
546 547 3.101437 TCTTTTATGCGGGAGGAGTACA 58.899 45.455 0.00 0.00 0.00 2.90
547 548 3.492829 CCTCTTTTATGCGGGAGGAGTAC 60.493 52.174 0.00 0.00 45.79 2.73
548 549 2.698797 CCTCTTTTATGCGGGAGGAGTA 59.301 50.000 0.00 0.00 45.79 2.59
549 550 1.486726 CCTCTTTTATGCGGGAGGAGT 59.513 52.381 0.00 0.00 45.79 3.85
550 551 1.202698 CCCTCTTTTATGCGGGAGGAG 60.203 57.143 9.14 0.00 45.79 3.69
551 552 0.837272 CCCTCTTTTATGCGGGAGGA 59.163 55.000 9.14 0.00 45.79 3.71
552 553 0.837272 TCCCTCTTTTATGCGGGAGG 59.163 55.000 0.00 0.00 40.69 4.30
554 555 1.874129 TCTCCCTCTTTTATGCGGGA 58.126 50.000 0.00 0.00 43.24 5.14
555 556 2.938956 ATCTCCCTCTTTTATGCGGG 57.061 50.000 0.00 0.00 38.07 6.13
556 557 3.947834 ACAAATCTCCCTCTTTTATGCGG 59.052 43.478 0.00 0.00 0.00 5.69
557 558 6.260936 ACATACAAATCTCCCTCTTTTATGCG 59.739 38.462 0.00 0.00 0.00 4.73
558 559 7.420800 CACATACAAATCTCCCTCTTTTATGC 58.579 38.462 0.00 0.00 0.00 3.14
559 560 7.284034 AGCACATACAAATCTCCCTCTTTTATG 59.716 37.037 0.00 0.00 0.00 1.90
560 561 7.349598 AGCACATACAAATCTCCCTCTTTTAT 58.650 34.615 0.00 0.00 0.00 1.40
561 562 6.721318 AGCACATACAAATCTCCCTCTTTTA 58.279 36.000 0.00 0.00 0.00 1.52
562 563 5.574188 AGCACATACAAATCTCCCTCTTTT 58.426 37.500 0.00 0.00 0.00 2.27
563 564 5.184892 AGCACATACAAATCTCCCTCTTT 57.815 39.130 0.00 0.00 0.00 2.52
564 565 4.681781 CGAGCACATACAAATCTCCCTCTT 60.682 45.833 0.00 0.00 0.00 2.85
565 566 3.181471 CGAGCACATACAAATCTCCCTCT 60.181 47.826 0.00 0.00 0.00 3.69
566 567 3.126831 CGAGCACATACAAATCTCCCTC 58.873 50.000 0.00 0.00 0.00 4.30
567 568 2.743183 GCGAGCACATACAAATCTCCCT 60.743 50.000 0.00 0.00 0.00 4.20
568 569 1.599542 GCGAGCACATACAAATCTCCC 59.400 52.381 0.00 0.00 0.00 4.30
569 570 2.279741 TGCGAGCACATACAAATCTCC 58.720 47.619 0.00 0.00 0.00 3.71
570 571 4.340894 TTTGCGAGCACATACAAATCTC 57.659 40.909 0.00 0.00 0.00 2.75
571 572 4.379813 CCTTTTGCGAGCACATACAAATCT 60.380 41.667 0.00 0.00 32.50 2.40
572 573 3.853671 CCTTTTGCGAGCACATACAAATC 59.146 43.478 0.00 0.00 32.50 2.17
573 574 3.505680 TCCTTTTGCGAGCACATACAAAT 59.494 39.130 0.00 0.00 32.50 2.32
574 575 2.881513 TCCTTTTGCGAGCACATACAAA 59.118 40.909 0.00 0.00 0.00 2.83
575 576 2.499197 TCCTTTTGCGAGCACATACAA 58.501 42.857 0.00 0.00 0.00 2.41
576 577 2.177394 TCCTTTTGCGAGCACATACA 57.823 45.000 0.00 0.00 0.00 2.29
577 578 3.552604 TTTCCTTTTGCGAGCACATAC 57.447 42.857 0.00 0.00 0.00 2.39
578 579 5.888691 TTATTTCCTTTTGCGAGCACATA 57.111 34.783 0.00 0.00 0.00 2.29
579 580 4.782019 TTATTTCCTTTTGCGAGCACAT 57.218 36.364 0.00 0.00 0.00 3.21
580 581 4.782019 ATTATTTCCTTTTGCGAGCACA 57.218 36.364 0.00 0.00 0.00 4.57
581 582 5.060940 GTGAATTATTTCCTTTTGCGAGCAC 59.939 40.000 0.00 0.00 0.00 4.40
582 583 5.048083 AGTGAATTATTTCCTTTTGCGAGCA 60.048 36.000 0.00 0.00 0.00 4.26
583 584 5.402398 AGTGAATTATTTCCTTTTGCGAGC 58.598 37.500 0.00 0.00 0.00 5.03
584 585 9.013490 CAATAGTGAATTATTTCCTTTTGCGAG 57.987 33.333 0.00 0.00 0.00 5.03
585 586 8.519526 ACAATAGTGAATTATTTCCTTTTGCGA 58.480 29.630 0.00 0.00 31.83 5.10
586 587 8.687824 ACAATAGTGAATTATTTCCTTTTGCG 57.312 30.769 0.00 0.00 31.83 4.85
607 608 9.045745 ACCCCAATTCAATTACAAGATTACAAT 57.954 29.630 0.00 0.00 0.00 2.71
608 609 8.310382 CACCCCAATTCAATTACAAGATTACAA 58.690 33.333 0.00 0.00 0.00 2.41
609 610 7.578571 GCACCCCAATTCAATTACAAGATTACA 60.579 37.037 0.00 0.00 0.00 2.41
610 611 6.756542 GCACCCCAATTCAATTACAAGATTAC 59.243 38.462 0.00 0.00 0.00 1.89
611 612 6.405286 CGCACCCCAATTCAATTACAAGATTA 60.405 38.462 0.00 0.00 0.00 1.75
612 613 5.624281 CGCACCCCAATTCAATTACAAGATT 60.624 40.000 0.00 0.00 0.00 2.40
613 614 4.142182 CGCACCCCAATTCAATTACAAGAT 60.142 41.667 0.00 0.00 0.00 2.40
614 615 3.192422 CGCACCCCAATTCAATTACAAGA 59.808 43.478 0.00 0.00 0.00 3.02
615 616 3.510719 CGCACCCCAATTCAATTACAAG 58.489 45.455 0.00 0.00 0.00 3.16
616 617 2.232452 CCGCACCCCAATTCAATTACAA 59.768 45.455 0.00 0.00 0.00 2.41
617 618 1.821753 CCGCACCCCAATTCAATTACA 59.178 47.619 0.00 0.00 0.00 2.41
618 619 1.136110 CCCGCACCCCAATTCAATTAC 59.864 52.381 0.00 0.00 0.00 1.89
619 620 1.479709 CCCGCACCCCAATTCAATTA 58.520 50.000 0.00 0.00 0.00 1.40
620 621 1.898330 GCCCGCACCCCAATTCAATT 61.898 55.000 0.00 0.00 0.00 2.32
621 622 2.358372 GCCCGCACCCCAATTCAAT 61.358 57.895 0.00 0.00 0.00 2.57
622 623 2.994417 GCCCGCACCCCAATTCAA 60.994 61.111 0.00 0.00 0.00 2.69
639 640 0.036952 AGTGAGATCAAGCCACACGG 60.037 55.000 0.00 0.00 36.71 4.94
640 641 1.354040 GAGTGAGATCAAGCCACACG 58.646 55.000 0.00 0.00 36.71 4.49
641 642 1.067565 TCGAGTGAGATCAAGCCACAC 60.068 52.381 0.00 0.00 33.53 3.82
642 643 1.067565 GTCGAGTGAGATCAAGCCACA 60.068 52.381 0.00 0.00 33.53 4.17
643 644 1.203523 AGTCGAGTGAGATCAAGCCAC 59.796 52.381 0.00 0.00 0.00 5.01
644 645 1.203287 CAGTCGAGTGAGATCAAGCCA 59.797 52.381 15.40 0.00 0.00 4.75
645 646 1.474478 TCAGTCGAGTGAGATCAAGCC 59.526 52.381 18.99 0.00 0.00 4.35
646 647 2.421775 TCTCAGTCGAGTGAGATCAAGC 59.578 50.000 37.53 1.03 46.52 4.01
653 654 5.106118 TGAGGTAAAATCTCAGTCGAGTGAG 60.106 44.000 34.80 34.80 44.71 3.51
654 655 4.765339 TGAGGTAAAATCTCAGTCGAGTGA 59.235 41.667 21.32 21.32 40.44 3.41
655 656 5.060662 TGAGGTAAAATCTCAGTCGAGTG 57.939 43.478 14.33 14.33 40.44 3.51
663 664 5.221362 TGTTGTCGACTGAGGTAAAATCTCA 60.221 40.000 17.92 0.00 38.75 3.27
664 665 5.227908 TGTTGTCGACTGAGGTAAAATCTC 58.772 41.667 17.92 0.00 0.00 2.75
665 666 5.209818 TGTTGTCGACTGAGGTAAAATCT 57.790 39.130 17.92 0.00 0.00 2.40
666 667 7.772332 ATATGTTGTCGACTGAGGTAAAATC 57.228 36.000 17.92 0.00 0.00 2.17
667 668 9.832445 ATTATATGTTGTCGACTGAGGTAAAAT 57.168 29.630 17.92 4.64 0.00 1.82
718 719 7.038658 TCGGGATCCATACAAAAATTCCTTTTT 60.039 33.333 15.23 0.00 43.62 1.94
719 720 6.439058 TCGGGATCCATACAAAAATTCCTTTT 59.561 34.615 15.23 0.00 37.75 2.27
720 721 5.955355 TCGGGATCCATACAAAAATTCCTTT 59.045 36.000 15.23 0.00 0.00 3.11
721 722 5.515106 TCGGGATCCATACAAAAATTCCTT 58.485 37.500 15.23 0.00 0.00 3.36
722 723 5.124036 TCGGGATCCATACAAAAATTCCT 57.876 39.130 15.23 0.00 0.00 3.36
723 724 5.845391 TTCGGGATCCATACAAAAATTCC 57.155 39.130 15.23 0.00 0.00 3.01
724 725 7.264947 ACAATTCGGGATCCATACAAAAATTC 58.735 34.615 15.23 0.00 0.00 2.17
725 726 7.181569 ACAATTCGGGATCCATACAAAAATT 57.818 32.000 15.23 5.42 0.00 1.82
726 727 6.790232 ACAATTCGGGATCCATACAAAAAT 57.210 33.333 15.23 0.00 0.00 1.82
727 728 7.889873 ATACAATTCGGGATCCATACAAAAA 57.110 32.000 15.23 0.00 0.00 1.94
728 729 7.013846 GGAATACAATTCGGGATCCATACAAAA 59.986 37.037 15.23 0.00 0.00 2.44
729 730 6.488683 GGAATACAATTCGGGATCCATACAAA 59.511 38.462 15.23 0.02 0.00 2.83
730 731 6.001460 GGAATACAATTCGGGATCCATACAA 58.999 40.000 15.23 0.01 0.00 2.41
731 732 5.072464 TGGAATACAATTCGGGATCCATACA 59.928 40.000 15.23 0.00 30.90 2.29
732 733 5.556915 TGGAATACAATTCGGGATCCATAC 58.443 41.667 15.23 0.00 30.90 2.39
733 734 5.834281 TGGAATACAATTCGGGATCCATA 57.166 39.130 15.23 0.00 30.90 2.74
734 735 4.722526 TGGAATACAATTCGGGATCCAT 57.277 40.909 15.23 0.00 30.90 3.41
735 736 4.722526 ATGGAATACAATTCGGGATCCA 57.277 40.909 15.23 0.00 39.59 3.41
736 737 8.801882 TTATTATGGAATACAATTCGGGATCC 57.198 34.615 1.92 1.92 0.00 3.36
826 830 4.871822 TCTCTCTCTCTCTCTCTCTCTCA 58.128 47.826 0.00 0.00 0.00 3.27
827 831 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
828 832 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
829 833 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
830 834 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
832 836 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
833 837 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
843 847 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
845 849 4.813697 GCTTTCTCTCTCTCTCTCTCTCTC 59.186 50.000 0.00 0.00 0.00 3.20
846 850 4.681781 CGCTTTCTCTCTCTCTCTCTCTCT 60.682 50.000 0.00 0.00 0.00 3.10
934 2982 2.879233 GCGGATAAGGGCATCGGGA 61.879 63.158 0.00 0.00 0.00 5.14
999 3047 0.874175 CGCCAATCTGCAATGCCATG 60.874 55.000 1.53 0.00 0.00 3.66
1035 3083 3.090532 ATCAGGCTCCGGAACCCC 61.091 66.667 20.50 13.31 0.00 4.95
1169 3217 0.108019 AAGAAAAAGCGGACGGGACT 59.892 50.000 0.00 0.00 0.00 3.85
1170 3218 0.949397 AAAGAAAAAGCGGACGGGAC 59.051 50.000 0.00 0.00 0.00 4.46
1225 3283 1.269448 TCGCTTTTCCATGGCAGAAAC 59.731 47.619 6.96 0.00 33.11 2.78
1233 3291 0.890683 AAAGGCCTCGCTTTTCCATG 59.109 50.000 5.23 0.00 32.54 3.66
1256 3314 1.783071 TCCCAAGTTCCCAAAACCAC 58.217 50.000 0.00 0.00 0.00 4.16
1257 3315 2.112190 GTTCCCAAGTTCCCAAAACCA 58.888 47.619 0.00 0.00 0.00 3.67
1261 3319 2.383855 CACAGTTCCCAAGTTCCCAAA 58.616 47.619 0.00 0.00 0.00 3.28
1262 3320 1.410932 CCACAGTTCCCAAGTTCCCAA 60.411 52.381 0.00 0.00 0.00 4.12
1263 3321 0.184933 CCACAGTTCCCAAGTTCCCA 59.815 55.000 0.00 0.00 0.00 4.37
1264 3322 1.179174 GCCACAGTTCCCAAGTTCCC 61.179 60.000 0.00 0.00 0.00 3.97
1265 3323 1.515521 CGCCACAGTTCCCAAGTTCC 61.516 60.000 0.00 0.00 0.00 3.62
1266 3324 0.534203 TCGCCACAGTTCCCAAGTTC 60.534 55.000 0.00 0.00 0.00 3.01
1267 3325 0.818040 GTCGCCACAGTTCCCAAGTT 60.818 55.000 0.00 0.00 0.00 2.66
1268 3326 1.227853 GTCGCCACAGTTCCCAAGT 60.228 57.895 0.00 0.00 0.00 3.16
1269 3327 1.227823 TGTCGCCACAGTTCCCAAG 60.228 57.895 0.00 0.00 0.00 3.61
1275 3333 1.889105 CTGCAGTGTCGCCACAGTT 60.889 57.895 5.25 0.00 44.39 3.16
1321 3379 3.772572 TGATCCAAGACCCGTGAATCTAA 59.227 43.478 0.00 0.00 0.00 2.10
1360 3424 7.656948 CAGAAAACAAAGCAAATCCTCCAAATA 59.343 33.333 0.00 0.00 0.00 1.40
1404 3472 8.707938 ATCCCTGTTAAAATGTACTTACGTAC 57.292 34.615 0.00 2.65 44.95 3.67
1405 3473 9.723601 AAATCCCTGTTAAAATGTACTTACGTA 57.276 29.630 0.00 0.00 0.00 3.57
1406 3474 8.625786 AAATCCCTGTTAAAATGTACTTACGT 57.374 30.769 0.00 0.00 0.00 3.57
1420 3488 9.984190 GGTAAACAATTGTTAAAATCCCTGTTA 57.016 29.630 23.53 5.66 37.25 2.41
1421 3489 8.710239 AGGTAAACAATTGTTAAAATCCCTGTT 58.290 29.630 23.53 6.61 37.25 3.16
1422 3490 8.257602 AGGTAAACAATTGTTAAAATCCCTGT 57.742 30.769 23.53 7.10 37.25 4.00
1423 3491 9.855021 CTAGGTAAACAATTGTTAAAATCCCTG 57.145 33.333 23.53 12.25 37.25 4.45
1424 3492 9.031537 CCTAGGTAAACAATTGTTAAAATCCCT 57.968 33.333 23.53 20.52 37.25 4.20
1425 3493 7.762615 GCCTAGGTAAACAATTGTTAAAATCCC 59.237 37.037 23.53 15.62 37.25 3.85
1426 3494 7.762615 GGCCTAGGTAAACAATTGTTAAAATCC 59.237 37.037 23.53 18.70 37.25 3.01
1427 3495 8.528643 AGGCCTAGGTAAACAATTGTTAAAATC 58.471 33.333 23.53 12.65 37.25 2.17
1450 3518 2.552315 TCACAATTCGAAAAGGTCAGGC 59.448 45.455 0.00 0.00 0.00 4.85
1451 3519 3.563808 TGTCACAATTCGAAAAGGTCAGG 59.436 43.478 0.00 0.00 0.00 3.86
1466 3586 3.625313 TCAGAGCGAAAAACATGTCACAA 59.375 39.130 0.00 0.00 0.00 3.33
1473 3593 4.992688 TGTTGTTTCAGAGCGAAAAACAT 58.007 34.783 9.45 0.00 45.11 2.71
1478 3598 4.955925 TTTCTGTTGTTTCAGAGCGAAA 57.044 36.364 0.00 0.00 43.85 3.46
1481 3601 5.342806 TGTATTTCTGTTGTTTCAGAGCG 57.657 39.130 0.00 0.00 43.85 5.03
1482 3602 6.145535 CCTTGTATTTCTGTTGTTTCAGAGC 58.854 40.000 0.00 0.00 43.85 4.09
1483 3603 6.486657 TCCCTTGTATTTCTGTTGTTTCAGAG 59.513 38.462 0.00 0.00 43.85 3.35
1491 3611 8.550376 CAAAATTGTTCCCTTGTATTTCTGTTG 58.450 33.333 0.00 0.00 0.00 3.33
1496 3622 5.994668 TGGCAAAATTGTTCCCTTGTATTTC 59.005 36.000 0.00 0.00 0.00 2.17
1606 3733 4.445557 AAGCCTCCAGTTTTCTTCTTCT 57.554 40.909 0.00 0.00 0.00 2.85
1613 3740 8.398665 CACAACTAATATAAGCCTCCAGTTTTC 58.601 37.037 0.00 0.00 0.00 2.29
1650 3777 2.354259 CTTGAGCAAGTCCACTCATCC 58.646 52.381 2.11 0.00 42.26 3.51
1709 3849 7.783090 AATCTGTATATTGACTTCAGCACTG 57.217 36.000 0.00 0.00 0.00 3.66
1726 3866 6.208840 ACCCCCTTTGTCTTTTAATCTGTA 57.791 37.500 0.00 0.00 0.00 2.74
1727 3867 5.074746 ACCCCCTTTGTCTTTTAATCTGT 57.925 39.130 0.00 0.00 0.00 3.41
1728 3868 4.462834 GGACCCCCTTTGTCTTTTAATCTG 59.537 45.833 0.00 0.00 33.22 2.90
1747 3887 8.265764 AGGTTAACAGATCATAAAGTAAGGACC 58.734 37.037 8.10 0.00 0.00 4.46
1749 3889 9.667107 CAAGGTTAACAGATCATAAAGTAAGGA 57.333 33.333 8.10 0.00 0.00 3.36
1754 3894 8.893727 GCATACAAGGTTAACAGATCATAAAGT 58.106 33.333 8.10 0.00 0.00 2.66
1755 3895 9.113838 AGCATACAAGGTTAACAGATCATAAAG 57.886 33.333 8.10 0.00 0.00 1.85
1758 3898 6.483307 GCAGCATACAAGGTTAACAGATCATA 59.517 38.462 8.10 0.00 0.00 2.15
1759 3899 5.297776 GCAGCATACAAGGTTAACAGATCAT 59.702 40.000 8.10 0.00 0.00 2.45
1761 3901 4.035675 GGCAGCATACAAGGTTAACAGATC 59.964 45.833 8.10 0.00 0.00 2.75
1762 3902 3.947834 GGCAGCATACAAGGTTAACAGAT 59.052 43.478 8.10 0.00 0.00 2.90
1763 3903 3.009033 AGGCAGCATACAAGGTTAACAGA 59.991 43.478 8.10 0.00 0.00 3.41
1765 3905 3.433306 AGGCAGCATACAAGGTTAACA 57.567 42.857 8.10 0.00 0.00 2.41
1766 3906 3.673323 GCAAGGCAGCATACAAGGTTAAC 60.673 47.826 0.00 0.00 0.00 2.01
1767 3907 2.491693 GCAAGGCAGCATACAAGGTTAA 59.508 45.455 0.00 0.00 0.00 2.01
1771 3911 1.180029 AAGCAAGGCAGCATACAAGG 58.820 50.000 4.78 0.00 36.85 3.61
1772 3912 3.733077 GCTTAAGCAAGGCAGCATACAAG 60.733 47.826 22.59 3.55 41.59 3.16
1773 3913 2.164219 GCTTAAGCAAGGCAGCATACAA 59.836 45.455 22.59 0.00 41.59 2.41
1802 4038 7.807907 AGATTGTAAAATTAAGTTCTGCAACCG 59.192 33.333 0.00 0.00 32.22 4.44
1852 4097 8.705048 TGGTTAACAAAAACATTGTTACTTCC 57.295 30.769 12.00 13.74 42.49 3.46
1875 4121 5.474825 ACATTTGCCTATTTACCGTTTTGG 58.525 37.500 0.00 0.00 46.41 3.28
1913 4159 8.916062 TGCTGGATTGTGAATTTATGATAATGT 58.084 29.630 0.00 0.00 0.00 2.71
1930 4176 2.821378 TCCATTTGACACTGCTGGATTG 59.179 45.455 0.00 0.00 31.19 2.67
1977 4227 7.441017 TCAATGTATTGGGGAAAAAGACTTTG 58.559 34.615 0.06 0.00 36.23 2.77
1988 4238 3.245229 ACAAGCACTCAATGTATTGGGGA 60.245 43.478 9.14 0.00 42.53 4.81
2000 4250 2.936919 ACAATCCAGACAAGCACTCA 57.063 45.000 0.00 0.00 0.00 3.41
2011 4261 9.612620 GTCTGTAAACTTTCATAAACAATCCAG 57.387 33.333 0.00 0.00 0.00 3.86
2032 4282 9.832445 ATCAACAATATTTAATACTCCGTCTGT 57.168 29.630 0.00 0.00 0.00 3.41
2037 4287 9.878599 GGTTCATCAACAATATTTAATACTCCG 57.121 33.333 0.00 0.00 33.70 4.63
2049 4299 8.281531 AGATAATGGAAGGGTTCATCAACAATA 58.718 33.333 0.00 0.00 33.70 1.90
2056 4306 6.187727 TGGTAGATAATGGAAGGGTTCATC 57.812 41.667 0.00 0.00 0.00 2.92
2057 4307 5.073691 CCTGGTAGATAATGGAAGGGTTCAT 59.926 44.000 0.00 0.00 0.00 2.57
2067 4317 3.508845 CCAACCCCTGGTAGATAATGG 57.491 52.381 0.00 0.00 40.78 3.16
2333 4615 7.867305 TCCTAAATGTAACACAACAACAGAA 57.133 32.000 0.00 0.00 32.02 3.02
2355 4637 7.401246 AGATCATTCTGGCCTTTATAAGATCC 58.599 38.462 3.32 0.00 31.09 3.36
2356 4638 9.950496 TTAGATCATTCTGGCCTTTATAAGATC 57.050 33.333 3.32 8.49 33.17 2.75
2357 4639 9.732130 GTTAGATCATTCTGGCCTTTATAAGAT 57.268 33.333 3.32 0.00 33.17 2.40
2358 4640 8.713971 TGTTAGATCATTCTGGCCTTTATAAGA 58.286 33.333 3.32 0.00 33.17 2.10
2359 4641 8.908786 TGTTAGATCATTCTGGCCTTTATAAG 57.091 34.615 3.32 0.00 33.17 1.73
2360 4642 9.288576 CATGTTAGATCATTCTGGCCTTTATAA 57.711 33.333 3.32 0.00 33.17 0.98
2361 4643 7.884877 CCATGTTAGATCATTCTGGCCTTTATA 59.115 37.037 3.32 0.00 33.17 0.98
2362 4644 6.718454 CCATGTTAGATCATTCTGGCCTTTAT 59.282 38.462 3.32 0.00 33.17 1.40
2363 4645 6.064060 CCATGTTAGATCATTCTGGCCTTTA 58.936 40.000 3.32 0.00 33.17 1.85
2364 4646 4.891756 CCATGTTAGATCATTCTGGCCTTT 59.108 41.667 3.32 0.00 33.17 3.11
2397 4680 5.357257 ACCAGGCAACACTAGATAAATACG 58.643 41.667 0.00 0.00 41.41 3.06
2401 4684 5.235850 TCAACCAGGCAACACTAGATAAA 57.764 39.130 0.00 0.00 41.41 1.40
2420 4703 2.422597 CACTAACGACCAGCCAATCAA 58.577 47.619 0.00 0.00 0.00 2.57
2434 4717 5.467063 GCCAAGAGTATATTCCAGCACTAAC 59.533 44.000 0.00 0.00 0.00 2.34
2437 4720 3.493350 CGCCAAGAGTATATTCCAGCACT 60.493 47.826 0.00 0.00 0.00 4.40
2464 4747 1.095228 ATATTCCACGGGCAACAGCG 61.095 55.000 0.00 0.00 39.74 5.18
2479 4762 6.069088 TGACACTCACTAAATTGGGGGATATT 60.069 38.462 0.00 0.00 0.00 1.28
2641 4926 1.810151 GGAAGTTGATGCCGTGCTAAA 59.190 47.619 0.00 0.00 0.00 1.85
2695 4980 1.070309 GTGACAGCAAGAACAAGAGCG 60.070 52.381 0.00 0.00 0.00 5.03
2809 5095 6.822667 TGAGCTCTGCAAGAAATTCAAATA 57.177 33.333 16.19 0.00 46.34 1.40
2834 5120 5.627499 AATCGTCACAATTGCTTGTACAT 57.373 34.783 5.05 0.00 43.76 2.29
2927 5213 6.131961 ACATACCCGTCAGTAACCTTATAGT 58.868 40.000 0.00 0.00 0.00 2.12
2990 5276 8.260270 AGTTTAAGTAGTTCAGTGAAAAACGT 57.740 30.769 7.25 9.40 31.41 3.99
2991 5277 9.550811 AAAGTTTAAGTAGTTCAGTGAAAAACG 57.449 29.630 7.25 0.00 31.41 3.60
3018 5304 8.895737 ACTGTTATTCCACTAGTTTTCGAAAAA 58.104 29.630 24.04 9.66 0.00 1.94
3019 5305 8.339714 CACTGTTATTCCACTAGTTTTCGAAAA 58.660 33.333 19.08 19.08 0.00 2.29
3020 5306 7.496591 ACACTGTTATTCCACTAGTTTTCGAAA 59.503 33.333 6.47 6.47 0.00 3.46
3021 5307 6.987992 ACACTGTTATTCCACTAGTTTTCGAA 59.012 34.615 0.00 0.00 0.00 3.71
3022 5308 6.518493 ACACTGTTATTCCACTAGTTTTCGA 58.482 36.000 0.00 0.00 0.00 3.71
3023 5309 6.780706 ACACTGTTATTCCACTAGTTTTCG 57.219 37.500 0.00 0.00 0.00 3.46
3024 5310 9.874215 GTTTACACTGTTATTCCACTAGTTTTC 57.126 33.333 0.00 0.00 0.00 2.29
3025 5311 9.623000 AGTTTACACTGTTATTCCACTAGTTTT 57.377 29.630 0.00 0.00 0.00 2.43
3026 5312 9.623000 AAGTTTACACTGTTATTCCACTAGTTT 57.377 29.630 0.00 0.00 31.60 2.66
3027 5313 9.623000 AAAGTTTACACTGTTATTCCACTAGTT 57.377 29.630 0.00 0.00 31.60 2.24
3028 5314 9.623000 AAAAGTTTACACTGTTATTCCACTAGT 57.377 29.630 0.00 0.00 27.39 2.57
3070 5357 2.040278 AGCAAGCACTCCATTTACTCCA 59.960 45.455 0.00 0.00 0.00 3.86
3181 5468 5.947663 TCTCCTTAATGGAAGTGGACAAAA 58.052 37.500 0.00 0.00 45.63 2.44
3233 5520 6.934645 TCTTGACCTGTCGATCAAAGTAAAAT 59.065 34.615 1.24 0.00 34.52 1.82
3254 5541 4.806247 GGTAGATCTCGTTGTGGATTCTTG 59.194 45.833 0.00 0.00 0.00 3.02
3260 5547 3.017442 CAGAGGTAGATCTCGTTGTGGA 58.983 50.000 0.00 0.00 38.71 4.02
3365 5652 4.982241 AATAGGTGTATCTGGGTCCATG 57.018 45.455 0.00 0.00 0.00 3.66
3476 5763 5.412594 TGAATAATTCAGTCAGAAGCACACC 59.587 40.000 0.00 0.00 40.15 4.16
3478 5765 6.233434 AGTGAATAATTCAGTCAGAAGCACA 58.767 36.000 0.00 0.00 39.00 4.57
3498 5785 9.562408 TTGTCACAACATACCTAAAAATAGTGA 57.438 29.630 0.00 0.00 34.73 3.41
3503 5790 7.286775 ACCACTTGTCACAACATACCTAAAAAT 59.713 33.333 0.00 0.00 34.73 1.82
3603 5903 7.224949 GGGTAGACTGCTAATTATCACAAGTTC 59.775 40.741 0.00 0.00 0.00 3.01
3627 5927 7.672983 TCTATATAGACTAAACGTTACGGGG 57.327 40.000 10.20 0.00 0.00 5.73
3669 5970 0.166814 CGCACTGCAGAAAAGTAGCC 59.833 55.000 23.35 0.00 0.00 3.93
3766 6067 5.163405 GGTCATCAGTATTCTAGGCTGTGAA 60.163 44.000 0.00 1.93 0.00 3.18
3870 6171 2.176273 GCAGCACAGATACCAGCCG 61.176 63.158 0.00 0.00 0.00 5.52
3910 6211 1.593196 TTCCTGCCAACTGAGAAACG 58.407 50.000 0.00 0.00 0.00 3.60
3996 6300 2.625737 CAGTGCTGTGCTGCTAACTAT 58.374 47.619 0.00 0.00 0.00 2.12
4004 6308 1.664873 ATCTATGCAGTGCTGTGCTG 58.335 50.000 17.60 1.08 44.32 4.41
4005 6309 2.414994 AATCTATGCAGTGCTGTGCT 57.585 45.000 17.60 0.00 44.32 4.40
4006 6310 4.825546 ATAAATCTATGCAGTGCTGTGC 57.174 40.909 17.60 4.10 44.27 4.57
4007 6311 8.183536 TGTTAAATAAATCTATGCAGTGCTGTG 58.816 33.333 17.60 6.10 0.00 3.66
4039 6343 4.533222 ACGGTCAAGCGTTTAAATTTCTG 58.467 39.130 0.73 0.00 0.00 3.02
4099 6403 2.890808 TCAAGATCGATACTGCCACC 57.109 50.000 0.00 0.00 0.00 4.61
4157 6461 2.343163 GACTCTCGCCGAGGTGATGG 62.343 65.000 15.08 4.94 44.33 3.51
4163 6467 1.227089 CCATTGACTCTCGCCGAGG 60.227 63.158 15.08 7.64 44.33 4.63
4174 6478 2.238521 TCTTGGCTCAAACCCATTGAC 58.761 47.619 0.00 0.00 43.08 3.18
4188 6492 5.010415 CCCTTTTCCTCATCATATTCTTGGC 59.990 44.000 0.00 0.00 0.00 4.52
4277 6581 2.419297 CGAGAAGAGGGTCCTTCATTGG 60.419 54.545 3.49 0.00 43.68 3.16
4353 6657 6.794064 CACTATTTGTGGGAAAAATGGGACAG 60.794 42.308 0.00 0.00 42.38 3.51
4354 6658 5.011533 CACTATTTGTGGGAAAAATGGGACA 59.988 40.000 0.00 0.00 42.99 4.02
4487 6794 4.039366 ACCAGAACTCCTAGACAAACAGAC 59.961 45.833 0.00 0.00 0.00 3.51
4602 6909 7.265673 GGGTAATAAAGCTTCTTCCATTTTCC 58.734 38.462 0.00 2.46 0.00 3.13
4614 6921 0.106369 GGCCGGGGGTAATAAAGCTT 60.106 55.000 2.18 0.00 0.00 3.74
4615 6922 0.991893 AGGCCGGGGGTAATAAAGCT 60.992 55.000 2.18 0.00 0.00 3.74
4616 6923 0.536687 GAGGCCGGGGGTAATAAAGC 60.537 60.000 2.18 0.00 0.00 3.51
4670 6977 4.309099 TGGTGACTTGTAATGAACGGTAC 58.691 43.478 0.00 0.00 0.00 3.34
4674 6981 5.666969 TTTCTGGTGACTTGTAATGAACG 57.333 39.130 0.00 0.00 0.00 3.95
4678 6985 8.783093 TGTTAGATTTTCTGGTGACTTGTAATG 58.217 33.333 0.00 0.00 0.00 1.90
4752 7059 1.423541 AGGAGCACACCACCAACAATA 59.576 47.619 0.00 0.00 0.00 1.90
4884 7191 8.689972 CCTAAAGAAACATGCATCCTCTTTAAT 58.310 33.333 22.50 10.37 37.85 1.40
5054 7366 4.574892 TGTGCTTTCTGGATAAATCACGA 58.425 39.130 0.00 0.00 37.97 4.35
5091 7403 2.100252 CCATGCATCTCCGCTGAAAAAT 59.900 45.455 0.00 0.00 0.00 1.82
5146 7458 4.936411 TCGCCCGTAGAAAATGTAAATGAA 59.064 37.500 0.00 0.00 0.00 2.57
5149 7461 4.095334 GGTTCGCCCGTAGAAAATGTAAAT 59.905 41.667 0.00 0.00 0.00 1.40
5284 7596 4.056125 GGGCCAGCGAGGTTTTGC 62.056 66.667 4.39 0.00 40.61 3.68
5355 7677 0.099082 CCCTGTCGACGACTAAGCTC 59.901 60.000 26.86 0.96 33.15 4.09
5356 7678 0.608582 ACCCTGTCGACGACTAAGCT 60.609 55.000 26.86 4.96 33.15 3.74
5357 7679 0.179169 GACCCTGTCGACGACTAAGC 60.179 60.000 26.86 10.36 33.15 3.09
5358 7680 1.397692 GAGACCCTGTCGACGACTAAG 59.602 57.143 26.86 17.17 37.67 2.18
5360 7682 0.322648 TGAGACCCTGTCGACGACTA 59.677 55.000 26.86 13.45 37.67 2.59
5361 7683 0.322636 ATGAGACCCTGTCGACGACT 60.323 55.000 26.86 8.35 37.67 4.18
5366 7688 2.831526 TGAATCAATGAGACCCTGTCGA 59.168 45.455 0.00 0.00 37.67 4.20
5368 7690 4.213564 ACTGAATCAATGAGACCCTGTC 57.786 45.455 0.00 0.00 0.00 3.51
5502 7832 1.259609 TCAGTATTCACCCGTTCCGT 58.740 50.000 0.00 0.00 0.00 4.69
5522 7852 9.170734 CTGTAAGATTCCATCATCTCTTTTCAA 57.829 33.333 0.00 0.00 34.07 2.69
5615 7949 7.278424 GGAACAAAACAGCAAATGCACATATAT 59.722 33.333 8.28 0.00 45.16 0.86
5616 7950 6.589523 GGAACAAAACAGCAAATGCACATATA 59.410 34.615 8.28 0.00 45.16 0.86
5639 7973 6.316319 GTGTTCGTTTCAAGTTTAAACAGGA 58.684 36.000 20.06 13.34 36.78 3.86
5702 8036 5.826737 AGCAGTGATCTATCCAAAATTCAGG 59.173 40.000 0.00 0.00 0.00 3.86
5742 8076 6.475402 GGTTGAACTAAAACCATGACAAGTTG 59.525 38.462 0.00 0.00 45.41 3.16
5782 8128 1.616865 CTGTTGTACTCCCTCCGTTCA 59.383 52.381 0.00 0.00 0.00 3.18
5820 8166 6.602406 CACCAAGGAGTACTAGCTAGTCTTTA 59.398 42.308 29.28 9.88 37.73 1.85
5959 8308 0.179111 GCTATGTCCAGCAGTACGCA 60.179 55.000 11.30 0.00 46.13 5.24
6013 8362 0.251653 ACCTCTCCGTTACAGAGCCA 60.252 55.000 0.00 0.00 36.77 4.75
6019 8368 1.891150 GACCTCAACCTCTCCGTTACA 59.109 52.381 0.00 0.00 0.00 2.41
6022 8371 1.965219 CGACCTCAACCTCTCCGTT 59.035 57.895 0.00 0.00 0.00 4.44
6041 8390 1.082117 GGCACCAAGTACACGATCCG 61.082 60.000 0.00 0.00 0.00 4.18
6076 8425 1.521681 CAGCGGGGATTTCGACTCC 60.522 63.158 4.87 4.87 0.00 3.85
6091 8440 5.106948 TGAGACTGACGAATTGATTTTCAGC 60.107 40.000 12.59 8.22 35.36 4.26
6141 8490 8.297426 CAGACAAATTATGATGCATATGAGCTT 58.703 33.333 6.97 0.00 34.99 3.74
6156 8505 5.734720 ACGACAGACCATCAGACAAATTAT 58.265 37.500 0.00 0.00 0.00 1.28
6160 8509 2.364002 TGACGACAGACCATCAGACAAA 59.636 45.455 0.00 0.00 0.00 2.83
6167 8516 2.028930 ACCTTCTTGACGACAGACCATC 60.029 50.000 0.00 0.00 0.00 3.51
6172 8521 1.613925 CTCCACCTTCTTGACGACAGA 59.386 52.381 0.00 0.00 0.00 3.41
6174 8523 1.410004 ACTCCACCTTCTTGACGACA 58.590 50.000 0.00 0.00 0.00 4.35
6175 8524 2.352519 GGTACTCCACCTTCTTGACGAC 60.353 54.545 0.00 0.00 44.79 4.34
6176 8525 1.891150 GGTACTCCACCTTCTTGACGA 59.109 52.381 0.00 0.00 44.79 4.20
6177 8526 2.365408 GGTACTCCACCTTCTTGACG 57.635 55.000 0.00 0.00 44.79 4.35
6187 8536 1.267121 TGGCTCTTCAGGTACTCCAC 58.733 55.000 0.00 0.00 34.60 4.02
6188 8537 2.254152 ATGGCTCTTCAGGTACTCCA 57.746 50.000 0.00 0.00 34.60 3.86
6189 8538 3.007398 CCATATGGCTCTTCAGGTACTCC 59.993 52.174 9.29 0.00 34.60 3.85
6190 8539 3.007398 CCCATATGGCTCTTCAGGTACTC 59.993 52.174 16.97 0.00 34.60 2.59
6191 8540 2.975489 CCCATATGGCTCTTCAGGTACT 59.025 50.000 16.97 0.00 43.88 2.73
6192 8541 3.409026 CCCATATGGCTCTTCAGGTAC 57.591 52.381 16.97 0.00 0.00 3.34
6225 8574 3.006323 TGCCAACATTGAAACGGCTAATT 59.994 39.130 0.00 0.00 43.38 1.40
6229 8578 0.031994 GTGCCAACATTGAAACGGCT 59.968 50.000 0.00 0.00 43.38 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.