Multiple sequence alignment - TraesCS4A01G297000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G297000 chr4A 100.000 1675 0 0 1 1675 596714349 596712675 0.000000e+00 3094
1 TraesCS4A01G297000 chr4A 86.109 1267 85 40 385 1622 596689201 596687997 0.000000e+00 1280
2 TraesCS4A01G297000 chr4A 100.000 306 0 0 1983 2288 596712367 596712062 1.190000e-157 566
3 TraesCS4A01G297000 chr4A 84.000 300 36 2 986 1285 596683316 596683029 6.230000e-71 278
4 TraesCS4A01G297000 chr4D 86.907 1222 71 26 386 1574 6698573 6699738 0.000000e+00 1288
5 TraesCS4A01G297000 chr4D 87.003 754 51 20 850 1593 6682168 6682884 0.000000e+00 806
6 TraesCS4A01G297000 chr4D 92.500 400 23 5 1 399 6681300 6681693 1.190000e-157 566
7 TraesCS4A01G297000 chr4D 83.500 400 47 16 977 1362 6684811 6685205 2.800000e-94 355
8 TraesCS4A01G297000 chr4D 90.661 257 10 3 594 850 6681884 6682126 1.690000e-86 329
9 TraesCS4A01G297000 chr4B 86.980 1129 69 36 386 1483 12015794 12016875 0.000000e+00 1199
10 TraesCS4A01G297000 chr4B 88.067 771 49 9 533 1301 11995209 11995938 0.000000e+00 874
11 TraesCS4A01G297000 chr4B 83.015 524 62 13 47 548 11994583 11995101 1.250000e-122 449
12 TraesCS4A01G297000 chr4B 87.921 356 31 6 1330 1675 11995936 11996289 2.120000e-110 409
13 TraesCS4A01G297000 chr4B 84.962 399 50 9 978 1367 12051698 12052095 1.650000e-106 396
14 TraesCS4A01G297000 chr4B 87.365 277 31 1 2012 2288 11996351 11996623 4.740000e-82 315


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G297000 chr4A 596712062 596714349 2287 True 1830.00 3094 100.000 1 2288 2 chr4A.!!$R3 2287
1 TraesCS4A01G297000 chr4A 596687997 596689201 1204 True 1280.00 1280 86.109 385 1622 1 chr4A.!!$R2 1237
2 TraesCS4A01G297000 chr4D 6698573 6699738 1165 False 1288.00 1288 86.907 386 1574 1 chr4D.!!$F1 1188
3 TraesCS4A01G297000 chr4D 6681300 6685205 3905 False 514.00 806 88.416 1 1593 4 chr4D.!!$F2 1592
4 TraesCS4A01G297000 chr4B 12015794 12016875 1081 False 1199.00 1199 86.980 386 1483 1 chr4B.!!$F1 1097
5 TraesCS4A01G297000 chr4B 11994583 11996623 2040 False 511.75 874 86.592 47 2288 4 chr4B.!!$F3 2241

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
755 941 0.243636 AGCCGCCAAGTGCAATAAAC 59.756 50.0 0.0 0.0 41.33 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2153 2458 0.033228 GTGATCCATCGGCTGAGAGG 59.967 60.0 9.94 9.94 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 65 1.135199 ACCTACATGTAACCACGCTCG 60.135 52.381 7.06 0.00 0.00 5.03
102 105 5.858049 TCCTTATAATAATCCGTAACGTGCG 59.142 40.000 5.89 5.89 0.00 5.34
168 171 4.156008 GTCCAATCAAACTTATCCACGCTT 59.844 41.667 0.00 0.00 0.00 4.68
194 197 2.566824 GGGCACCGATTGACAACAT 58.433 52.632 0.00 0.00 40.86 2.71
222 225 2.874701 GTGCTTGTGCCCTACATGATAG 59.125 50.000 0.00 0.00 39.48 2.08
223 226 2.771372 TGCTTGTGCCCTACATGATAGA 59.229 45.455 0.00 0.00 39.48 1.98
249 264 6.698380 ACTACGAGTAATTTCAACCATCTGT 58.302 36.000 0.00 0.00 0.00 3.41
312 327 2.568090 CCCAAGCGGACATGCAAC 59.432 61.111 0.00 0.00 37.31 4.17
356 372 2.666022 GCAACGGCGCTTCAAAAATTAT 59.334 40.909 6.90 0.00 0.00 1.28
387 403 4.705337 AACGTCCAAAGTTGCAGTAAAA 57.295 36.364 0.00 0.00 0.00 1.52
458 504 6.514947 TCTTAGTGTGAAAATTTGCAAGCAT 58.485 32.000 0.00 0.00 0.00 3.79
470 533 9.656040 AAAATTTGCAAGCATCTTTGATGTATA 57.344 25.926 0.00 0.00 0.00 1.47
471 534 9.826574 AAATTTGCAAGCATCTTTGATGTATAT 57.173 25.926 0.00 0.00 0.00 0.86
574 760 9.862371 GAATGTACTGTTCATAGAAGAAGAGAA 57.138 33.333 7.69 0.00 40.30 2.87
577 763 8.735315 TGTACTGTTCATAGAAGAAGAGAAGAG 58.265 37.037 7.69 0.00 40.30 2.85
578 764 8.952278 GTACTGTTCATAGAAGAAGAGAAGAGA 58.048 37.037 7.69 0.00 40.30 3.10
579 765 8.415950 ACTGTTCATAGAAGAAGAGAAGAGAA 57.584 34.615 7.69 0.00 40.30 2.87
598 784 0.847373 AGAGCTCGGGGATCAGAGTA 59.153 55.000 8.37 0.00 36.88 2.59
624 810 1.078324 TCCGGTTACTTTCTCCCTCCT 59.922 52.381 0.00 0.00 0.00 3.69
625 811 1.907255 CCGGTTACTTTCTCCCTCCTT 59.093 52.381 0.00 0.00 0.00 3.36
626 812 2.305052 CCGGTTACTTTCTCCCTCCTTT 59.695 50.000 0.00 0.00 0.00 3.11
665 851 2.158959 CGAACCTAGCTTGTCCGCG 61.159 63.158 0.00 0.00 34.40 6.46
681 867 4.489771 CGCCCCTTTCGATGGCCT 62.490 66.667 3.32 0.00 42.29 5.19
748 934 0.249447 AAAAAGAAGCCGCCAAGTGC 60.249 50.000 0.00 0.00 0.00 4.40
749 935 1.391157 AAAAGAAGCCGCCAAGTGCA 61.391 50.000 0.00 0.00 41.33 4.57
750 936 1.391157 AAAGAAGCCGCCAAGTGCAA 61.391 50.000 0.00 0.00 41.33 4.08
751 937 1.181098 AAGAAGCCGCCAAGTGCAAT 61.181 50.000 0.00 0.00 41.33 3.56
752 938 0.322456 AGAAGCCGCCAAGTGCAATA 60.322 50.000 0.00 0.00 41.33 1.90
753 939 0.525761 GAAGCCGCCAAGTGCAATAA 59.474 50.000 0.00 0.00 41.33 1.40
754 940 0.965439 AAGCCGCCAAGTGCAATAAA 59.035 45.000 0.00 0.00 41.33 1.40
755 941 0.243636 AGCCGCCAAGTGCAATAAAC 59.756 50.000 0.00 0.00 41.33 2.01
756 942 0.243636 GCCGCCAAGTGCAATAAACT 59.756 50.000 0.00 0.00 41.33 2.66
757 943 1.981254 CCGCCAAGTGCAATAAACTG 58.019 50.000 0.00 0.00 41.33 3.16
758 944 1.339711 CGCCAAGTGCAATAAACTGC 58.660 50.000 0.00 0.00 42.95 4.40
917 1157 2.956987 CAGCGCCAACCCAAGAAG 59.043 61.111 2.29 0.00 0.00 2.85
921 1165 1.978617 CGCCAACCCAAGAAGCCAT 60.979 57.895 0.00 0.00 0.00 4.40
924 1168 0.322456 CCAACCCAAGAAGCCATCGA 60.322 55.000 0.00 0.00 0.00 3.59
936 1180 3.918220 CATCGAGCTCGCCGCAAC 61.918 66.667 30.97 0.00 42.61 4.17
937 1181 4.135153 ATCGAGCTCGCCGCAACT 62.135 61.111 30.97 6.40 42.61 3.16
938 1182 4.778415 TCGAGCTCGCCGCAACTC 62.778 66.667 30.97 0.00 42.61 3.01
940 1184 4.742201 GAGCTCGCCGCAACTCCA 62.742 66.667 0.00 0.00 42.61 3.86
941 1185 4.749310 AGCTCGCCGCAACTCCAG 62.749 66.667 0.00 0.00 42.61 3.86
997 1262 5.453903 CGGTCTGACCCATTCTTATTCATCT 60.454 44.000 20.68 0.00 33.75 2.90
1250 1515 1.735198 GCGACGTCGGACATTTCCA 60.735 57.895 36.13 0.00 43.00 3.53
1364 1631 5.590663 CAGTGCCAGTGTAGAAGAGTATAGA 59.409 44.000 0.00 0.00 0.00 1.98
1395 1662 6.473397 ACGAACTCTGTTCTTTGATTGATC 57.527 37.500 8.51 0.00 0.00 2.92
1396 1663 5.991606 ACGAACTCTGTTCTTTGATTGATCA 59.008 36.000 8.51 0.00 34.44 2.92
1524 1809 5.509716 TTTCAGTTGTGTCTAACGAGAGA 57.490 39.130 0.00 0.00 35.73 3.10
1525 1810 4.485024 TCAGTTGTGTCTAACGAGAGAC 57.515 45.455 12.61 12.61 44.44 3.36
1540 1836 4.150627 ACGAGAGACATTGAAATCACAACG 59.849 41.667 0.00 0.00 32.50 4.10
1563 1859 3.799137 AACCATTAGTTACACGCGTTG 57.201 42.857 10.22 8.21 36.74 4.10
1596 1895 3.057946 GTCCTGAATTCTTTTGAAGCGCT 60.058 43.478 2.64 2.64 42.30 5.92
1597 1896 3.569701 TCCTGAATTCTTTTGAAGCGCTT 59.430 39.130 25.35 25.35 42.30 4.68
1607 1906 2.975410 TGAAGCGCTTGTCAATTCTG 57.025 45.000 30.47 0.00 0.00 3.02
1610 1912 1.153958 GCGCTTGTCAATTCTGGGC 60.154 57.895 0.00 0.00 0.00 5.36
2020 2322 0.546747 TTAGTGGGACTGGGACTGGG 60.547 60.000 0.00 0.00 0.00 4.45
2021 2323 1.448814 TAGTGGGACTGGGACTGGGA 61.449 60.000 0.00 0.00 0.00 4.37
2022 2324 2.203938 TGGGACTGGGACTGGGAC 60.204 66.667 0.00 0.00 0.00 4.46
2023 2325 2.122954 GGGACTGGGACTGGGACT 59.877 66.667 0.00 0.00 0.00 3.85
2024 2326 2.294078 GGGACTGGGACTGGGACTG 61.294 68.421 0.00 0.00 0.00 3.51
2025 2327 2.294078 GGACTGGGACTGGGACTGG 61.294 68.421 0.00 0.00 0.00 4.00
2028 2330 4.631740 TGGGACTGGGACTGGCGA 62.632 66.667 0.00 0.00 35.52 5.54
2052 2354 2.037620 CTAGCGGAGGAGGCAGCAAT 62.038 60.000 0.00 0.00 0.00 3.56
2054 2356 1.153168 GCGGAGGAGGCAGCAATTA 60.153 57.895 0.00 0.00 0.00 1.40
2055 2357 0.748005 GCGGAGGAGGCAGCAATTAA 60.748 55.000 0.00 0.00 0.00 1.40
2056 2358 1.972872 CGGAGGAGGCAGCAATTAAT 58.027 50.000 0.00 0.00 0.00 1.40
2074 2379 3.851458 AATGCATGAGAGGTAGCATCA 57.149 42.857 0.00 2.81 46.10 3.07
2096 2401 2.360350 CCGCAGATGGTTGTGCCT 60.360 61.111 0.00 0.00 38.88 4.75
2106 2411 1.141254 TGGTTGTGCCTTAAGGTTCGA 59.859 47.619 22.55 12.51 38.35 3.71
2112 2417 0.245813 GCCTTAAGGTTCGACCGACT 59.754 55.000 22.55 0.00 44.90 4.18
2124 2429 1.203994 CGACCGACTATGTTGGAGGTT 59.796 52.381 10.66 0.00 39.36 3.50
2153 2458 1.065782 GGGTGAGAGGAGGAAGAAAGC 60.066 57.143 0.00 0.00 0.00 3.51
2214 2519 3.632145 GTGACTGGAGCCAAAGAAAAAGA 59.368 43.478 0.00 0.00 0.00 2.52
2216 2521 4.339247 TGACTGGAGCCAAAGAAAAAGAAG 59.661 41.667 0.00 0.00 0.00 2.85
2232 2537 7.777440 AGAAAAAGAAGAGAAATCAGTCCACTT 59.223 33.333 0.00 0.00 0.00 3.16
2269 2574 6.093633 GCCCGAATTACAAGTGTCTATCTTTT 59.906 38.462 0.00 0.00 0.00 2.27
2273 2578 7.481798 CGAATTACAAGTGTCTATCTTTTTGCC 59.518 37.037 0.00 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 39 0.538118 GGTTACATGTAGGTCGGCCA 59.462 55.000 9.71 0.00 37.19 5.36
38 40 0.538118 TGGTTACATGTAGGTCGGCC 59.462 55.000 0.00 0.00 0.00 6.13
102 105 2.212900 GACACAAGATTTGGCGGCCC 62.213 60.000 17.97 0.00 34.12 5.80
222 225 8.969267 CAGATGGTTGAAATTACTCGTAGTATC 58.031 37.037 0.00 0.00 29.64 2.24
223 226 8.475639 ACAGATGGTTGAAATTACTCGTAGTAT 58.524 33.333 0.00 0.00 29.64 2.12
312 327 6.036735 TGCGAGGGTATTCTTTTCGAATTTAG 59.963 38.462 0.00 0.00 42.26 1.85
368 384 5.746245 TCAAATTTTACTGCAACTTTGGACG 59.254 36.000 0.00 0.00 0.00 4.79
424 470 3.548745 TCACACTAAGATGGCATCCAG 57.451 47.619 23.33 21.24 36.75 3.86
512 577 5.999205 AAATGGGCAGTACATTCAAATGA 57.001 34.783 9.62 0.00 37.55 2.57
574 760 0.260230 TGATCCCCGAGCTCTTCTCT 59.740 55.000 12.85 0.00 39.70 3.10
577 763 0.673437 CTCTGATCCCCGAGCTCTTC 59.327 60.000 12.85 1.74 0.00 2.87
578 764 0.032615 ACTCTGATCCCCGAGCTCTT 60.033 55.000 12.85 0.00 0.00 2.85
579 765 0.847373 TACTCTGATCCCCGAGCTCT 59.153 55.000 12.85 0.00 0.00 4.09
598 784 3.054582 GGGAGAAAGTAACCGGAAATCCT 60.055 47.826 9.46 0.00 0.00 3.24
681 867 5.007626 CGTGTGAAAGAAGTCCAAAATCTGA 59.992 40.000 0.00 0.00 0.00 3.27
721 907 1.335051 GCGGCTTCTTTTTGACCTGTC 60.335 52.381 0.00 0.00 0.00 3.51
748 934 1.756538 GGGGTGGATGGCAGTTTATTG 59.243 52.381 0.00 0.00 0.00 1.90
749 935 1.684869 CGGGGTGGATGGCAGTTTATT 60.685 52.381 0.00 0.00 0.00 1.40
750 936 0.106719 CGGGGTGGATGGCAGTTTAT 60.107 55.000 0.00 0.00 0.00 1.40
751 937 1.202099 TCGGGGTGGATGGCAGTTTA 61.202 55.000 0.00 0.00 0.00 2.01
752 938 2.035626 CGGGGTGGATGGCAGTTT 59.964 61.111 0.00 0.00 0.00 2.66
753 939 2.484287 CTTCGGGGTGGATGGCAGTT 62.484 60.000 0.00 0.00 0.00 3.16
754 940 2.933287 TTCGGGGTGGATGGCAGT 60.933 61.111 0.00 0.00 0.00 4.40
755 941 2.124570 CTTCGGGGTGGATGGCAG 60.125 66.667 0.00 0.00 0.00 4.85
756 942 3.727258 CCTTCGGGGTGGATGGCA 61.727 66.667 0.00 0.00 0.00 4.92
757 943 2.682582 GATCCTTCGGGGTGGATGGC 62.683 65.000 0.00 0.00 42.56 4.40
758 944 1.451936 GATCCTTCGGGGTGGATGG 59.548 63.158 0.00 0.00 42.56 3.51
942 1186 3.316573 GACGTTGGAGGCCTGGAGG 62.317 68.421 12.00 3.67 38.53 4.30
1299 1564 1.886542 TCACACATGCTCTACTGACGT 59.113 47.619 0.00 0.00 0.00 4.34
1300 1565 2.636768 TCACACATGCTCTACTGACG 57.363 50.000 0.00 0.00 0.00 4.35
1301 1566 4.151335 CAGTTTCACACATGCTCTACTGAC 59.849 45.833 0.00 0.00 35.06 3.51
1302 1567 4.202253 ACAGTTTCACACATGCTCTACTGA 60.202 41.667 15.66 0.00 36.25 3.41
1364 1631 7.782049 TCAAAGAACAGAGTTCGTATATCCAT 58.218 34.615 4.43 0.00 0.00 3.41
1377 1644 7.612668 ACTGATGATCAATCAAAGAACAGAG 57.387 36.000 0.00 0.00 44.77 3.35
1419 1686 6.687081 AATTTGTCTTTCACGTTCCTTGTA 57.313 33.333 0.00 0.00 0.00 2.41
1422 1689 5.804979 CACAAATTTGTCTTTCACGTTCCTT 59.195 36.000 20.85 0.00 39.91 3.36
1500 1784 6.421202 GTCTCTCGTTAGACACAACTGAAATT 59.579 38.462 12.88 0.00 44.41 1.82
1524 1809 3.801594 GGTTTGCGTTGTGATTTCAATGT 59.198 39.130 0.00 0.00 36.88 2.71
1525 1810 3.801050 TGGTTTGCGTTGTGATTTCAATG 59.199 39.130 0.00 0.00 37.38 2.82
1526 1811 4.052159 TGGTTTGCGTTGTGATTTCAAT 57.948 36.364 0.00 0.00 0.00 2.57
1527 1812 3.510388 TGGTTTGCGTTGTGATTTCAA 57.490 38.095 0.00 0.00 0.00 2.69
1528 1813 3.724508 ATGGTTTGCGTTGTGATTTCA 57.275 38.095 0.00 0.00 0.00 2.69
1529 1814 5.219633 ACTAATGGTTTGCGTTGTGATTTC 58.780 37.500 0.00 0.00 0.00 2.17
1530 1815 5.195001 ACTAATGGTTTGCGTTGTGATTT 57.805 34.783 0.00 0.00 0.00 2.17
1531 1816 4.846779 ACTAATGGTTTGCGTTGTGATT 57.153 36.364 0.00 0.00 0.00 2.57
1532 1817 4.846779 AACTAATGGTTTGCGTTGTGAT 57.153 36.364 0.00 0.00 33.90 3.06
1533 1818 4.575236 TGTAACTAATGGTTTGCGTTGTGA 59.425 37.500 0.00 0.00 39.17 3.58
1534 1819 4.673311 GTGTAACTAATGGTTTGCGTTGTG 59.327 41.667 0.00 0.00 39.17 3.33
1540 1836 2.096119 ACGCGTGTAACTAATGGTTTGC 60.096 45.455 12.93 0.00 39.17 3.68
1563 1859 6.765915 AAGAATTCAGGACAAAGAATAGCC 57.234 37.500 8.44 0.00 33.58 3.93
1596 1895 1.304052 CGGGGCCCAGAATTGACAA 60.304 57.895 26.86 0.00 0.00 3.18
1597 1896 2.354729 CGGGGCCCAGAATTGACA 59.645 61.111 26.86 0.00 0.00 3.58
1607 1906 3.764160 CTCATCTCTTGCGGGGCCC 62.764 68.421 15.76 15.76 0.00 5.80
1610 1912 1.144936 GTCCTCATCTCTTGCGGGG 59.855 63.158 0.00 0.00 30.67 5.73
1985 2287 5.028131 CCCACTAAACCTACCCTTCTAAGA 58.972 45.833 0.00 0.00 0.00 2.10
1987 2289 4.779489 GTCCCACTAAACCTACCCTTCTAA 59.221 45.833 0.00 0.00 0.00 2.10
2020 2322 0.317938 CCGCTAGTACATCGCCAGTC 60.318 60.000 0.00 0.00 0.00 3.51
2021 2323 0.750546 TCCGCTAGTACATCGCCAGT 60.751 55.000 0.00 0.00 0.00 4.00
2022 2324 0.039978 CTCCGCTAGTACATCGCCAG 60.040 60.000 0.00 0.00 0.00 4.85
2023 2325 1.452953 CCTCCGCTAGTACATCGCCA 61.453 60.000 0.00 0.00 0.00 5.69
2024 2326 1.170919 TCCTCCGCTAGTACATCGCC 61.171 60.000 0.00 0.00 0.00 5.54
2025 2327 0.238817 CTCCTCCGCTAGTACATCGC 59.761 60.000 0.00 0.00 0.00 4.58
2028 2330 0.106167 TGCCTCCTCCGCTAGTACAT 60.106 55.000 0.00 0.00 0.00 2.29
2052 2354 5.059161 GTGATGCTACCTCTCATGCATTAA 58.941 41.667 0.00 0.00 44.80 1.40
2054 2356 3.474600 GTGATGCTACCTCTCATGCATT 58.525 45.455 0.00 0.00 44.80 3.56
2056 2358 1.139654 GGTGATGCTACCTCTCATGCA 59.860 52.381 0.00 0.00 37.74 3.96
2085 2390 2.159382 CGAACCTTAAGGCACAACCAT 58.841 47.619 21.92 0.00 43.14 3.55
2096 2401 4.487948 CAACATAGTCGGTCGAACCTTAA 58.512 43.478 0.00 0.00 35.66 1.85
2106 2411 1.975680 ACAACCTCCAACATAGTCGGT 59.024 47.619 0.00 0.00 0.00 4.69
2112 2417 3.639094 CCCAACAAACAACCTCCAACATA 59.361 43.478 0.00 0.00 0.00 2.29
2124 2429 1.142870 CTCCTCTCACCCCAACAAACA 59.857 52.381 0.00 0.00 0.00 2.83
2153 2458 0.033228 GTGATCCATCGGCTGAGAGG 59.967 60.000 9.94 9.94 0.00 3.69
2159 2464 1.287191 CGATCGTGATCCATCGGCT 59.713 57.895 7.03 0.00 38.60 5.52
2199 2504 7.428826 TGATTTCTCTTCTTTTTCTTTGGCTC 58.571 34.615 0.00 0.00 0.00 4.70
2207 2512 7.503521 AGTGGACTGATTTCTCTTCTTTTTC 57.496 36.000 0.00 0.00 0.00 2.29
2214 2519 9.965902 ATATTTGTAAGTGGACTGATTTCTCTT 57.034 29.630 0.00 0.00 0.00 2.85
2250 2555 8.409358 AAGGCAAAAAGATAGACACTTGTAAT 57.591 30.769 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.