Multiple sequence alignment - TraesCS4A01G293400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G293400 chr4A 100.000 4350 0 0 1 4350 595390148 595394497 0.000000e+00 8034.0
1 TraesCS4A01G293400 chr4A 95.469 3355 132 14 768 4111 64813686 64817031 0.000000e+00 5336.0
2 TraesCS4A01G293400 chr4A 89.375 160 16 1 177 335 111287093 111286934 2.650000e-47 200.0
3 TraesCS4A01G293400 chr4A 85.714 112 16 0 1599 1710 396556672 396556561 7.640000e-23 119.0
4 TraesCS4A01G293400 chr2B 99.254 3353 17 3 763 4110 13326723 13323374 0.000000e+00 6047.0
5 TraesCS4A01G293400 chr2B 95.839 721 29 1 1735 2454 773114487 773113767 0.000000e+00 1164.0
6 TraesCS4A01G293400 chr2B 83.879 856 56 24 2846 3640 572555932 572556766 0.000000e+00 741.0
7 TraesCS4A01G293400 chr2B 95.673 208 8 1 3480 3686 773113771 773113564 2.510000e-87 333.0
8 TraesCS4A01G293400 chr2B 87.805 205 22 3 3918 4120 782975651 782975448 2.020000e-58 237.0
9 TraesCS4A01G293400 chr2B 87.805 205 21 4 3918 4120 782990619 782990417 2.020000e-58 237.0
10 TraesCS4A01G293400 chr7A 96.251 3361 88 18 764 4110 657009018 657005682 0.000000e+00 5474.0
11 TraesCS4A01G293400 chr7A 90.385 156 15 0 180 335 638133944 638133789 5.700000e-49 206.0
12 TraesCS4A01G293400 chr7B 91.478 2300 137 18 1421 3686 699428208 699425934 0.000000e+00 3107.0
13 TraesCS4A01G293400 chr7B 91.248 537 41 5 837 1372 699522526 699521995 0.000000e+00 726.0
14 TraesCS4A01G293400 chr7B 90.306 196 15 4 3918 4110 4990140 4990334 2.010000e-63 254.0
15 TraesCS4A01G293400 chr7D 91.345 2045 96 30 770 2761 541414486 541412470 0.000000e+00 2721.0
16 TraesCS4A01G293400 chr7D 94.020 903 31 5 2757 3636 541384818 541383916 0.000000e+00 1347.0
17 TraesCS4A01G293400 chr7D 89.103 156 17 0 180 335 562297536 562297691 1.230000e-45 195.0
18 TraesCS4A01G293400 chr3B 93.814 1471 78 5 2218 3678 44127355 44128822 0.000000e+00 2200.0
19 TraesCS4A01G293400 chr3B 86.553 528 55 4 1706 2218 459448057 459447531 6.310000e-158 568.0
20 TraesCS4A01G293400 chr3B 87.379 206 21 5 3918 4120 51769338 51769541 9.410000e-57 231.0
21 TraesCS4A01G293400 chr3B 81.395 129 6 7 2978 3088 771131117 771131245 5.990000e-14 89.8
22 TraesCS4A01G293400 chr6A 93.514 925 47 6 1599 2521 87307880 87308793 0.000000e+00 1363.0
23 TraesCS4A01G293400 chr6A 88.701 708 61 9 762 1465 87307102 87307794 0.000000e+00 846.0
24 TraesCS4A01G293400 chr6A 86.792 212 23 5 3918 4125 86393391 86393181 9.410000e-57 231.0
25 TraesCS4A01G293400 chr6A 95.652 69 3 0 1533 1601 87307791 87307859 1.280000e-20 111.0
26 TraesCS4A01G293400 chr5A 89.905 733 66 6 762 1491 420349564 420348837 0.000000e+00 937.0
27 TraesCS4A01G293400 chr5A 88.011 734 78 8 762 1491 134735440 134734713 0.000000e+00 859.0
28 TraesCS4A01G293400 chr5A 90.022 451 32 7 3683 4120 679161199 679160749 4.880000e-159 571.0
29 TraesCS4A01G293400 chr5A 88.073 109 13 0 224 332 675278379 675278487 3.530000e-26 130.0
30 TraesCS4A01G293400 chr2A 89.617 732 66 8 764 1491 707311931 707311206 0.000000e+00 922.0
31 TraesCS4A01G293400 chrUn 91.297 586 39 7 2230 2808 79580842 79580262 0.000000e+00 789.0
32 TraesCS4A01G293400 chrUn 90.441 136 13 0 200 335 354364614 354364749 3.460000e-41 180.0
33 TraesCS4A01G293400 chr3D 91.297 586 40 6 2230 2808 53782851 53782270 0.000000e+00 789.0
34 TraesCS4A01G293400 chr3D 88.215 594 64 4 956 1546 604867948 604867358 0.000000e+00 704.0
35 TraesCS4A01G293400 chr3D 100.000 31 0 0 305 335 397919535 397919565 1.690000e-04 58.4
36 TraesCS4A01G293400 chr2D 85.954 655 45 13 3020 3636 488218944 488219589 0.000000e+00 656.0
37 TraesCS4A01G293400 chr2D 85.714 161 8 7 2848 3008 488218685 488218830 5.820000e-34 156.0
38 TraesCS4A01G293400 chr1B 83.238 698 58 27 2978 3634 667239763 667239084 1.740000e-163 586.0
39 TraesCS4A01G293400 chr1B 89.744 156 16 0 180 335 115751701 115751546 2.650000e-47 200.0
40 TraesCS4A01G293400 chr3A 89.213 445 43 5 3682 4122 575786885 575787328 6.360000e-153 551.0
41 TraesCS4A01G293400 chr3A 85.529 539 63 3 1699 2222 477335731 477335193 2.290000e-152 549.0
42 TraesCS4A01G293400 chr3A 79.581 191 20 9 3772 3951 435804298 435804116 7.640000e-23 119.0
43 TraesCS4A01G293400 chr3A 85.714 84 12 0 1599 1682 648343210 648343293 5.990000e-14 89.8
44 TraesCS4A01G293400 chr4B 88.312 231 25 1 1 229 14272439 14272209 4.290000e-70 276.0
45 TraesCS4A01G293400 chr4B 90.090 111 8 2 4153 4263 14271891 14271784 1.630000e-29 141.0
46 TraesCS4A01G293400 chr5B 86.957 161 18 3 177 335 528265444 528265285 1.240000e-40 178.0
47 TraesCS4A01G293400 chr1D 84.615 156 19 1 180 335 333233015 333233165 2.710000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G293400 chr4A 595390148 595394497 4349 False 8034.000000 8034 100.000000 1 4350 1 chr4A.!!$F2 4349
1 TraesCS4A01G293400 chr4A 64813686 64817031 3345 False 5336.000000 5336 95.469000 768 4111 1 chr4A.!!$F1 3343
2 TraesCS4A01G293400 chr2B 13323374 13326723 3349 True 6047.000000 6047 99.254000 763 4110 1 chr2B.!!$R1 3347
3 TraesCS4A01G293400 chr2B 773113564 773114487 923 True 748.500000 1164 95.756000 1735 3686 2 chr2B.!!$R4 1951
4 TraesCS4A01G293400 chr2B 572555932 572556766 834 False 741.000000 741 83.879000 2846 3640 1 chr2B.!!$F1 794
5 TraesCS4A01G293400 chr7A 657005682 657009018 3336 True 5474.000000 5474 96.251000 764 4110 1 chr7A.!!$R2 3346
6 TraesCS4A01G293400 chr7B 699425934 699428208 2274 True 3107.000000 3107 91.478000 1421 3686 1 chr7B.!!$R1 2265
7 TraesCS4A01G293400 chr7B 699521995 699522526 531 True 726.000000 726 91.248000 837 1372 1 chr7B.!!$R2 535
8 TraesCS4A01G293400 chr7D 541412470 541414486 2016 True 2721.000000 2721 91.345000 770 2761 1 chr7D.!!$R2 1991
9 TraesCS4A01G293400 chr7D 541383916 541384818 902 True 1347.000000 1347 94.020000 2757 3636 1 chr7D.!!$R1 879
10 TraesCS4A01G293400 chr3B 44127355 44128822 1467 False 2200.000000 2200 93.814000 2218 3678 1 chr3B.!!$F1 1460
11 TraesCS4A01G293400 chr3B 459447531 459448057 526 True 568.000000 568 86.553000 1706 2218 1 chr3B.!!$R1 512
12 TraesCS4A01G293400 chr6A 87307102 87308793 1691 False 773.333333 1363 92.622333 762 2521 3 chr6A.!!$F1 1759
13 TraesCS4A01G293400 chr5A 420348837 420349564 727 True 937.000000 937 89.905000 762 1491 1 chr5A.!!$R2 729
14 TraesCS4A01G293400 chr5A 134734713 134735440 727 True 859.000000 859 88.011000 762 1491 1 chr5A.!!$R1 729
15 TraesCS4A01G293400 chr2A 707311206 707311931 725 True 922.000000 922 89.617000 764 1491 1 chr2A.!!$R1 727
16 TraesCS4A01G293400 chrUn 79580262 79580842 580 True 789.000000 789 91.297000 2230 2808 1 chrUn.!!$R1 578
17 TraesCS4A01G293400 chr3D 53782270 53782851 581 True 789.000000 789 91.297000 2230 2808 1 chr3D.!!$R1 578
18 TraesCS4A01G293400 chr3D 604867358 604867948 590 True 704.000000 704 88.215000 956 1546 1 chr3D.!!$R2 590
19 TraesCS4A01G293400 chr2D 488218685 488219589 904 False 406.000000 656 85.834000 2848 3636 2 chr2D.!!$F1 788
20 TraesCS4A01G293400 chr1B 667239084 667239763 679 True 586.000000 586 83.238000 2978 3634 1 chr1B.!!$R2 656
21 TraesCS4A01G293400 chr3A 477335193 477335731 538 True 549.000000 549 85.529000 1699 2222 1 chr3A.!!$R2 523
22 TraesCS4A01G293400 chr4B 14271784 14272439 655 True 208.500000 276 89.201000 1 4263 2 chr4B.!!$R1 4262

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
621 644 0.035915 GCTCCACCAACCTCTTCCTC 60.036 60.000 0.0 0.0 0.00 3.71 F
660 683 0.036388 TAGAGGCCCTCGCAACAAAG 60.036 55.000 4.8 0.0 35.36 2.77 F
685 708 0.109153 TCTCTGCTTTCCTGCTTGCA 59.891 50.000 0.0 0.0 0.00 4.08 F
686 709 0.956633 CTCTGCTTTCCTGCTTGCAA 59.043 50.000 0.0 0.0 34.90 4.08 F
720 744 1.131693 CACTCACACGCCGACACTATA 59.868 52.381 0.0 0.0 0.00 1.31 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1498 1533 0.322975 ATCTCCTTTGTCACGCAGCT 59.677 50.000 0.00 0.0 0.00 4.24 R
1748 1837 2.750301 CGTCATCAACGTCCTCGATA 57.250 50.000 0.00 0.0 46.42 2.92 R
2219 2325 4.022935 CCAGCAAAGACATCTAAGCAACAA 60.023 41.667 7.85 0.0 0.00 2.83 R
2284 2393 4.517285 ACAGGCATTATCAAACACGATCT 58.483 39.130 0.00 0.0 0.00 2.75 R
4119 4383 2.704464 TCAGCTATGCTCAGCAACAT 57.296 45.000 1.73 0.0 43.62 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.278127 CCCTTGGTCTACCGAACATGT 59.722 52.381 0.00 0.00 36.59 3.21
41 42 3.684788 CCGAACATGTGACTAAGGGAAAG 59.315 47.826 0.00 0.00 0.00 2.62
42 43 3.684788 CGAACATGTGACTAAGGGAAAGG 59.315 47.826 0.00 0.00 0.00 3.11
47 48 6.314917 ACATGTGACTAAGGGAAAGGAAAAT 58.685 36.000 0.00 0.00 0.00 1.82
48 49 6.782494 ACATGTGACTAAGGGAAAGGAAAATT 59.218 34.615 0.00 0.00 0.00 1.82
52 53 7.343316 TGTGACTAAGGGAAAGGAAAATTTTCA 59.657 33.333 27.53 7.30 38.92 2.69
88 89 7.569639 CCATATAGGTATACGTCTAGCACAT 57.430 40.000 11.99 7.45 0.00 3.21
104 105 8.171840 GTCTAGCACATATGTTTCAGAGAAAAC 58.828 37.037 5.37 0.00 39.16 2.43
128 129 1.070445 CCAGAGAGGCAAGCTATGAGG 59.930 57.143 0.00 0.00 0.00 3.86
185 188 3.584294 GGGACCATCTAGTTAAGGGCTA 58.416 50.000 0.00 0.00 0.00 3.93
190 193 4.140758 ACCATCTAGTTAAGGGCTAGCCTA 60.141 45.833 32.18 15.92 36.71 3.93
192 195 4.810584 TCTAGTTAAGGGCTAGCCTAGT 57.189 45.455 32.18 19.53 36.71 2.57
214 217 2.357154 GCAGTGGTTAAGTCATCCCCAT 60.357 50.000 0.00 0.00 0.00 4.00
229 232 0.890683 CCCATTTGTGCCAAGAGGTC 59.109 55.000 0.00 0.00 37.19 3.85
230 233 0.890683 CCATTTGTGCCAAGAGGTCC 59.109 55.000 0.00 0.00 37.19 4.46
231 234 1.548582 CCATTTGTGCCAAGAGGTCCT 60.549 52.381 0.00 0.00 37.19 3.85
232 235 2.290896 CCATTTGTGCCAAGAGGTCCTA 60.291 50.000 0.00 0.00 37.19 2.94
233 236 2.859165 TTTGTGCCAAGAGGTCCTAG 57.141 50.000 0.00 0.00 37.19 3.02
234 237 0.984230 TTGTGCCAAGAGGTCCTAGG 59.016 55.000 0.82 0.82 37.19 3.02
235 238 0.178903 TGTGCCAAGAGGTCCTAGGT 60.179 55.000 9.08 0.00 37.19 3.08
236 239 0.984995 GTGCCAAGAGGTCCTAGGTT 59.015 55.000 9.08 0.00 37.19 3.50
237 240 1.066071 GTGCCAAGAGGTCCTAGGTTC 60.066 57.143 9.08 5.68 37.19 3.62
238 241 1.276622 GCCAAGAGGTCCTAGGTTCA 58.723 55.000 9.08 0.00 37.19 3.18
239 242 1.628846 GCCAAGAGGTCCTAGGTTCAA 59.371 52.381 9.08 0.00 37.19 2.69
240 243 2.039879 GCCAAGAGGTCCTAGGTTCAAA 59.960 50.000 9.08 0.00 37.19 2.69
241 244 3.676093 CCAAGAGGTCCTAGGTTCAAAC 58.324 50.000 9.08 0.00 0.00 2.93
254 257 2.297701 GTTCAAACCAACCTCTCTGCA 58.702 47.619 0.00 0.00 0.00 4.41
255 258 2.887152 GTTCAAACCAACCTCTCTGCAT 59.113 45.455 0.00 0.00 0.00 3.96
256 259 3.228188 TCAAACCAACCTCTCTGCATT 57.772 42.857 0.00 0.00 0.00 3.56
257 260 2.886523 TCAAACCAACCTCTCTGCATTG 59.113 45.455 0.00 0.00 0.00 2.82
258 261 1.251251 AACCAACCTCTCTGCATTGC 58.749 50.000 0.46 0.46 0.00 3.56
259 262 0.111061 ACCAACCTCTCTGCATTGCA 59.889 50.000 11.50 11.50 36.92 4.08
260 263 0.524862 CCAACCTCTCTGCATTGCAC 59.475 55.000 7.38 0.00 33.79 4.57
261 264 1.531423 CAACCTCTCTGCATTGCACT 58.469 50.000 7.38 0.00 33.79 4.40
262 265 1.884579 CAACCTCTCTGCATTGCACTT 59.115 47.619 7.38 0.00 33.79 3.16
263 266 2.283145 ACCTCTCTGCATTGCACTTT 57.717 45.000 7.38 0.00 33.79 2.66
264 267 1.884579 ACCTCTCTGCATTGCACTTTG 59.115 47.619 7.38 0.00 33.79 2.77
265 268 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
277 280 2.716217 GCACTTTGCAGGGATAAGTCT 58.284 47.619 0.00 0.00 44.26 3.24
295 298 8.953223 ATAAGTCTACGTTCCTATAATCCCTT 57.047 34.615 0.00 0.00 0.00 3.95
298 301 4.763793 TCTACGTTCCTATAATCCCTTCCG 59.236 45.833 0.00 0.00 0.00 4.30
299 302 3.569491 ACGTTCCTATAATCCCTTCCGA 58.431 45.455 0.00 0.00 0.00 4.55
307 310 1.272554 AATCCCTTCCGAGACCCCAC 61.273 60.000 0.00 0.00 0.00 4.61
312 315 1.460689 TTCCGAGACCCCACCTTGT 60.461 57.895 0.00 0.00 0.00 3.16
315 318 1.189524 CCGAGACCCCACCTTGTGTA 61.190 60.000 0.00 0.00 0.00 2.90
332 335 3.118992 TGTGTAGGAGCTTCTATGCACTG 60.119 47.826 18.73 0.00 34.99 3.66
345 368 2.362889 CACTGGGGCCCATTCACC 60.363 66.667 28.95 5.10 30.82 4.02
358 381 4.855340 CCCATTCACCTTATGTACTTGGT 58.145 43.478 0.00 0.00 0.00 3.67
373 396 6.062749 TGTACTTGGTAGCAATTAACCACAA 58.937 36.000 7.98 0.00 45.31 3.33
374 397 5.447624 ACTTGGTAGCAATTAACCACAAC 57.552 39.130 7.98 0.00 45.31 3.32
375 398 4.890581 ACTTGGTAGCAATTAACCACAACA 59.109 37.500 7.98 0.00 45.31 3.33
376 399 4.839668 TGGTAGCAATTAACCACAACAC 57.160 40.909 0.00 0.00 40.84 3.32
377 400 3.570550 TGGTAGCAATTAACCACAACACC 59.429 43.478 0.00 0.00 40.84 4.16
378 401 3.570550 GGTAGCAATTAACCACAACACCA 59.429 43.478 0.00 0.00 35.73 4.17
379 402 4.320935 GGTAGCAATTAACCACAACACCAG 60.321 45.833 0.00 0.00 35.73 4.00
380 403 3.295973 AGCAATTAACCACAACACCAGT 58.704 40.909 0.00 0.00 0.00 4.00
381 404 3.068024 AGCAATTAACCACAACACCAGTG 59.932 43.478 0.00 0.00 36.76 3.66
393 416 3.297134 ACACCAGTGTTGTTCCTCATT 57.703 42.857 0.00 0.00 41.83 2.57
394 417 3.214328 ACACCAGTGTTGTTCCTCATTC 58.786 45.455 0.00 0.00 41.83 2.67
395 418 2.554032 CACCAGTGTTGTTCCTCATTCC 59.446 50.000 0.00 0.00 0.00 3.01
396 419 2.174639 ACCAGTGTTGTTCCTCATTCCA 59.825 45.455 0.00 0.00 0.00 3.53
397 420 2.554032 CCAGTGTTGTTCCTCATTCCAC 59.446 50.000 0.00 0.00 0.00 4.02
398 421 3.480470 CAGTGTTGTTCCTCATTCCACT 58.520 45.455 0.00 0.00 33.37 4.00
399 422 3.499918 CAGTGTTGTTCCTCATTCCACTC 59.500 47.826 0.00 0.00 31.93 3.51
400 423 3.392616 AGTGTTGTTCCTCATTCCACTCT 59.607 43.478 0.00 0.00 29.92 3.24
401 424 3.499918 GTGTTGTTCCTCATTCCACTCTG 59.500 47.826 0.00 0.00 0.00 3.35
402 425 3.136443 TGTTGTTCCTCATTCCACTCTGT 59.864 43.478 0.00 0.00 0.00 3.41
403 426 3.407424 TGTTCCTCATTCCACTCTGTG 57.593 47.619 0.00 0.00 0.00 3.66
404 427 2.079925 GTTCCTCATTCCACTCTGTGC 58.920 52.381 0.00 0.00 31.34 4.57
405 428 0.615331 TCCTCATTCCACTCTGTGCC 59.385 55.000 0.00 0.00 31.34 5.01
406 429 0.742281 CCTCATTCCACTCTGTGCCG 60.742 60.000 0.00 0.00 31.34 5.69
407 430 1.364626 CTCATTCCACTCTGTGCCGC 61.365 60.000 0.00 0.00 31.34 6.53
408 431 2.045926 ATTCCACTCTGTGCCGCC 60.046 61.111 0.00 0.00 31.34 6.13
409 432 2.596851 ATTCCACTCTGTGCCGCCT 61.597 57.895 0.00 0.00 31.34 5.52
410 433 2.527951 ATTCCACTCTGTGCCGCCTC 62.528 60.000 0.00 0.00 31.34 4.70
411 434 3.699894 CCACTCTGTGCCGCCTCT 61.700 66.667 0.00 0.00 31.34 3.69
412 435 2.433838 CACTCTGTGCCGCCTCTG 60.434 66.667 0.00 0.00 0.00 3.35
413 436 4.385405 ACTCTGTGCCGCCTCTGC 62.385 66.667 0.00 0.00 0.00 4.26
414 437 4.079850 CTCTGTGCCGCCTCTGCT 62.080 66.667 0.00 0.00 34.43 4.24
415 438 4.383861 TCTGTGCCGCCTCTGCTG 62.384 66.667 0.00 0.00 34.43 4.41
418 441 4.457496 GTGCCGCCTCTGCTGCTA 62.457 66.667 0.00 0.00 46.60 3.49
419 442 3.473647 TGCCGCCTCTGCTGCTAT 61.474 61.111 0.00 0.00 46.60 2.97
420 443 2.664518 GCCGCCTCTGCTGCTATC 60.665 66.667 0.00 0.00 43.54 2.08
421 444 2.030262 CCGCCTCTGCTGCTATCC 59.970 66.667 0.00 0.00 34.43 2.59
422 445 2.030262 CGCCTCTGCTGCTATCCC 59.970 66.667 0.00 0.00 34.43 3.85
423 446 2.506061 CGCCTCTGCTGCTATCCCT 61.506 63.158 0.00 0.00 34.43 4.20
424 447 1.835693 GCCTCTGCTGCTATCCCTT 59.164 57.895 0.00 0.00 33.53 3.95
425 448 0.534652 GCCTCTGCTGCTATCCCTTG 60.535 60.000 0.00 0.00 33.53 3.61
426 449 0.835941 CCTCTGCTGCTATCCCTTGT 59.164 55.000 0.00 0.00 0.00 3.16
427 450 2.042464 CCTCTGCTGCTATCCCTTGTA 58.958 52.381 0.00 0.00 0.00 2.41
428 451 2.435805 CCTCTGCTGCTATCCCTTGTAA 59.564 50.000 0.00 0.00 0.00 2.41
429 452 3.462021 CTCTGCTGCTATCCCTTGTAAC 58.538 50.000 0.00 0.00 0.00 2.50
430 453 2.837591 TCTGCTGCTATCCCTTGTAACA 59.162 45.455 0.00 0.00 0.00 2.41
431 454 3.118629 TCTGCTGCTATCCCTTGTAACAG 60.119 47.826 0.00 0.00 0.00 3.16
432 455 1.943340 GCTGCTATCCCTTGTAACAGC 59.057 52.381 0.00 0.00 41.80 4.40
433 456 2.420687 GCTGCTATCCCTTGTAACAGCT 60.421 50.000 0.00 0.00 44.25 4.24
434 457 3.201290 CTGCTATCCCTTGTAACAGCTG 58.799 50.000 13.48 13.48 0.00 4.24
435 458 1.943340 GCTATCCCTTGTAACAGCTGC 59.057 52.381 15.27 0.00 0.00 5.25
436 459 2.420687 GCTATCCCTTGTAACAGCTGCT 60.421 50.000 15.27 3.62 0.00 4.24
437 460 2.887151 ATCCCTTGTAACAGCTGCTT 57.113 45.000 15.27 10.05 0.00 3.91
438 461 1.896220 TCCCTTGTAACAGCTGCTTG 58.104 50.000 15.27 0.00 0.00 4.01
439 462 0.242017 CCCTTGTAACAGCTGCTTGC 59.758 55.000 15.27 11.39 43.29 4.01
449 472 3.677648 CTGCTTGCGCCCTGCTTT 61.678 61.111 4.18 0.00 46.63 3.51
450 473 3.621892 CTGCTTGCGCCCTGCTTTC 62.622 63.158 4.18 0.00 46.63 2.62
451 474 4.426112 GCTTGCGCCCTGCTTTCC 62.426 66.667 4.18 0.00 46.63 3.13
452 475 2.674380 CTTGCGCCCTGCTTTCCT 60.674 61.111 4.18 0.00 46.63 3.36
453 476 2.985282 TTGCGCCCTGCTTTCCTG 60.985 61.111 4.18 0.00 46.63 3.86
456 479 3.130160 CGCCCTGCTTTCCTGCTC 61.130 66.667 0.00 0.00 0.00 4.26
457 480 2.753446 GCCCTGCTTTCCTGCTCC 60.753 66.667 0.00 0.00 0.00 4.70
458 481 2.759114 CCCTGCTTTCCTGCTCCA 59.241 61.111 0.00 0.00 0.00 3.86
459 482 1.676967 CCCTGCTTTCCTGCTCCAC 60.677 63.158 0.00 0.00 0.00 4.02
460 483 1.676967 CCTGCTTTCCTGCTCCACC 60.677 63.158 0.00 0.00 0.00 4.61
461 484 2.032528 TGCTTTCCTGCTCCACCG 59.967 61.111 0.00 0.00 0.00 4.94
462 485 2.347490 GCTTTCCTGCTCCACCGA 59.653 61.111 0.00 0.00 0.00 4.69
463 486 2.035442 GCTTTCCTGCTCCACCGAC 61.035 63.158 0.00 0.00 0.00 4.79
464 487 1.376037 CTTTCCTGCTCCACCGACC 60.376 63.158 0.00 0.00 0.00 4.79
465 488 1.831652 CTTTCCTGCTCCACCGACCT 61.832 60.000 0.00 0.00 0.00 3.85
466 489 1.827399 TTTCCTGCTCCACCGACCTC 61.827 60.000 0.00 0.00 0.00 3.85
467 490 2.681778 CCTGCTCCACCGACCTCT 60.682 66.667 0.00 0.00 0.00 3.69
468 491 2.716017 CCTGCTCCACCGACCTCTC 61.716 68.421 0.00 0.00 0.00 3.20
469 492 2.680352 TGCTCCACCGACCTCTCC 60.680 66.667 0.00 0.00 0.00 3.71
470 493 2.680352 GCTCCACCGACCTCTCCA 60.680 66.667 0.00 0.00 0.00 3.86
471 494 2.060980 GCTCCACCGACCTCTCCAT 61.061 63.158 0.00 0.00 0.00 3.41
472 495 1.617947 GCTCCACCGACCTCTCCATT 61.618 60.000 0.00 0.00 0.00 3.16
473 496 0.461961 CTCCACCGACCTCTCCATTC 59.538 60.000 0.00 0.00 0.00 2.67
474 497 0.041238 TCCACCGACCTCTCCATTCT 59.959 55.000 0.00 0.00 0.00 2.40
475 498 0.461961 CCACCGACCTCTCCATTCTC 59.538 60.000 0.00 0.00 0.00 2.87
476 499 1.186200 CACCGACCTCTCCATTCTCA 58.814 55.000 0.00 0.00 0.00 3.27
477 500 1.759445 CACCGACCTCTCCATTCTCAT 59.241 52.381 0.00 0.00 0.00 2.90
478 501 2.959030 CACCGACCTCTCCATTCTCATA 59.041 50.000 0.00 0.00 0.00 2.15
479 502 2.959707 ACCGACCTCTCCATTCTCATAC 59.040 50.000 0.00 0.00 0.00 2.39
480 503 2.297597 CCGACCTCTCCATTCTCATACC 59.702 54.545 0.00 0.00 0.00 2.73
481 504 2.030717 CGACCTCTCCATTCTCATACCG 60.031 54.545 0.00 0.00 0.00 4.02
482 505 3.223435 GACCTCTCCATTCTCATACCGA 58.777 50.000 0.00 0.00 0.00 4.69
483 506 3.226777 ACCTCTCCATTCTCATACCGAG 58.773 50.000 0.00 0.00 43.80 4.63
491 514 2.130272 TCTCATACCGAGACACTGCT 57.870 50.000 0.00 0.00 46.18 4.24
492 515 1.745653 TCTCATACCGAGACACTGCTG 59.254 52.381 0.00 0.00 46.18 4.41
493 516 0.173481 TCATACCGAGACACTGCTGC 59.827 55.000 0.00 0.00 0.00 5.25
494 517 0.807667 CATACCGAGACACTGCTGCC 60.808 60.000 0.00 0.00 0.00 4.85
495 518 1.961180 ATACCGAGACACTGCTGCCC 61.961 60.000 0.00 0.00 0.00 5.36
496 519 3.699894 CCGAGACACTGCTGCCCT 61.700 66.667 0.00 0.00 0.00 5.19
497 520 2.125753 CGAGACACTGCTGCCCTC 60.126 66.667 0.00 0.00 0.00 4.30
498 521 2.125753 GAGACACTGCTGCCCTCG 60.126 66.667 0.00 0.00 0.00 4.63
499 522 4.385405 AGACACTGCTGCCCTCGC 62.385 66.667 0.00 0.00 0.00 5.03
507 530 3.114616 CTGCCCTCGCGACAACTG 61.115 66.667 3.71 0.00 38.08 3.16
510 533 2.571757 CCCTCGCGACAACTGCTA 59.428 61.111 3.71 0.00 0.00 3.49
511 534 1.080093 CCCTCGCGACAACTGCTAA 60.080 57.895 3.71 0.00 0.00 3.09
512 535 0.460284 CCCTCGCGACAACTGCTAAT 60.460 55.000 3.71 0.00 0.00 1.73
513 536 0.924090 CCTCGCGACAACTGCTAATC 59.076 55.000 3.71 0.00 0.00 1.75
514 537 1.469940 CCTCGCGACAACTGCTAATCT 60.470 52.381 3.71 0.00 0.00 2.40
515 538 1.849219 CTCGCGACAACTGCTAATCTC 59.151 52.381 3.71 0.00 0.00 2.75
516 539 1.472878 TCGCGACAACTGCTAATCTCT 59.527 47.619 3.71 0.00 0.00 3.10
517 540 1.585668 CGCGACAACTGCTAATCTCTG 59.414 52.381 0.00 0.00 0.00 3.35
518 541 1.325943 GCGACAACTGCTAATCTCTGC 59.674 52.381 0.00 0.00 0.00 4.26
519 542 2.886081 CGACAACTGCTAATCTCTGCT 58.114 47.619 0.00 0.00 0.00 4.24
520 543 3.257393 CGACAACTGCTAATCTCTGCTT 58.743 45.455 0.00 0.00 0.00 3.91
521 544 3.681897 CGACAACTGCTAATCTCTGCTTT 59.318 43.478 0.00 0.00 0.00 3.51
522 545 4.201666 CGACAACTGCTAATCTCTGCTTTC 60.202 45.833 0.00 0.00 0.00 2.62
523 546 4.006319 ACAACTGCTAATCTCTGCTTTCC 58.994 43.478 0.00 0.00 0.00 3.13
524 547 4.260170 CAACTGCTAATCTCTGCTTTCCT 58.740 43.478 0.00 0.00 0.00 3.36
525 548 3.871485 ACTGCTAATCTCTGCTTTCCTG 58.129 45.455 0.00 0.00 0.00 3.86
526 549 2.613133 CTGCTAATCTCTGCTTTCCTGC 59.387 50.000 0.00 0.00 0.00 4.85
527 550 2.238144 TGCTAATCTCTGCTTTCCTGCT 59.762 45.455 0.00 0.00 0.00 4.24
528 551 2.871633 GCTAATCTCTGCTTTCCTGCTC 59.128 50.000 0.00 0.00 0.00 4.26
529 552 3.432046 GCTAATCTCTGCTTTCCTGCTCT 60.432 47.826 0.00 0.00 0.00 4.09
530 553 2.985957 ATCTCTGCTTTCCTGCTCTC 57.014 50.000 0.00 0.00 0.00 3.20
531 554 1.637338 TCTCTGCTTTCCTGCTCTCA 58.363 50.000 0.00 0.00 0.00 3.27
532 555 1.973515 TCTCTGCTTTCCTGCTCTCAA 59.026 47.619 0.00 0.00 0.00 3.02
533 556 2.028294 TCTCTGCTTTCCTGCTCTCAAG 60.028 50.000 0.00 0.00 0.00 3.02
542 565 4.232310 GCTCTCAAGCCATCACCC 57.768 61.111 0.00 0.00 43.10 4.61
543 566 1.606531 GCTCTCAAGCCATCACCCT 59.393 57.895 0.00 0.00 43.10 4.34
544 567 0.463474 GCTCTCAAGCCATCACCCTC 60.463 60.000 0.00 0.00 43.10 4.30
545 568 0.179936 CTCTCAAGCCATCACCCTCC 59.820 60.000 0.00 0.00 0.00 4.30
546 569 0.252881 TCTCAAGCCATCACCCTCCT 60.253 55.000 0.00 0.00 0.00 3.69
547 570 1.008327 TCTCAAGCCATCACCCTCCTA 59.992 52.381 0.00 0.00 0.00 2.94
548 571 1.139853 CTCAAGCCATCACCCTCCTAC 59.860 57.143 0.00 0.00 0.00 3.18
549 572 1.207791 CAAGCCATCACCCTCCTACT 58.792 55.000 0.00 0.00 0.00 2.57
550 573 1.139853 CAAGCCATCACCCTCCTACTC 59.860 57.143 0.00 0.00 0.00 2.59
551 574 0.339859 AGCCATCACCCTCCTACTCA 59.660 55.000 0.00 0.00 0.00 3.41
552 575 0.466124 GCCATCACCCTCCTACTCAC 59.534 60.000 0.00 0.00 0.00 3.51
553 576 1.866015 CCATCACCCTCCTACTCACA 58.134 55.000 0.00 0.00 0.00 3.58
554 577 2.402564 CCATCACCCTCCTACTCACAT 58.597 52.381 0.00 0.00 0.00 3.21
555 578 2.103771 CCATCACCCTCCTACTCACATG 59.896 54.545 0.00 0.00 0.00 3.21
556 579 1.195115 TCACCCTCCTACTCACATGC 58.805 55.000 0.00 0.00 0.00 4.06
557 580 1.198713 CACCCTCCTACTCACATGCT 58.801 55.000 0.00 0.00 0.00 3.79
558 581 1.134580 CACCCTCCTACTCACATGCTG 60.135 57.143 0.00 0.00 0.00 4.41
559 582 1.273267 ACCCTCCTACTCACATGCTGA 60.273 52.381 0.00 0.00 0.00 4.26
577 600 1.421268 TGAGACTCCAGCACCATTGTT 59.579 47.619 0.00 0.00 0.00 2.83
578 601 1.808945 GAGACTCCAGCACCATTGTTG 59.191 52.381 0.00 0.00 33.86 3.33
579 602 1.143684 AGACTCCAGCACCATTGTTGT 59.856 47.619 0.00 0.00 32.21 3.32
580 603 1.956477 GACTCCAGCACCATTGTTGTT 59.044 47.619 0.00 0.00 32.21 2.83
581 604 2.362077 GACTCCAGCACCATTGTTGTTT 59.638 45.455 0.00 0.00 32.21 2.83
582 605 2.765699 ACTCCAGCACCATTGTTGTTTT 59.234 40.909 0.00 0.00 32.21 2.43
583 606 3.125316 CTCCAGCACCATTGTTGTTTTG 58.875 45.455 0.00 0.00 32.21 2.44
584 607 1.598601 CCAGCACCATTGTTGTTTTGC 59.401 47.619 0.00 0.00 32.21 3.68
585 608 2.553086 CAGCACCATTGTTGTTTTGCT 58.447 42.857 0.00 0.00 0.00 3.91
586 609 2.937799 CAGCACCATTGTTGTTTTGCTT 59.062 40.909 0.00 0.00 0.00 3.91
587 610 2.937799 AGCACCATTGTTGTTTTGCTTG 59.062 40.909 0.00 0.00 0.00 4.01
588 611 2.031930 GCACCATTGTTGTTTTGCTTGG 59.968 45.455 0.00 0.00 0.00 3.61
589 612 3.269178 CACCATTGTTGTTTTGCTTGGT 58.731 40.909 0.00 0.00 36.46 3.67
590 613 3.309410 CACCATTGTTGTTTTGCTTGGTC 59.691 43.478 0.00 0.00 33.88 4.02
591 614 2.871633 CCATTGTTGTTTTGCTTGGTCC 59.128 45.455 0.00 0.00 0.00 4.46
592 615 2.682155 TTGTTGTTTTGCTTGGTCCC 57.318 45.000 0.00 0.00 0.00 4.46
593 616 1.859302 TGTTGTTTTGCTTGGTCCCT 58.141 45.000 0.00 0.00 0.00 4.20
594 617 1.480137 TGTTGTTTTGCTTGGTCCCTG 59.520 47.619 0.00 0.00 0.00 4.45
595 618 0.463620 TTGTTTTGCTTGGTCCCTGC 59.536 50.000 0.00 0.00 0.00 4.85
596 619 0.396974 TGTTTTGCTTGGTCCCTGCT 60.397 50.000 5.06 0.00 0.00 4.24
597 620 0.752658 GTTTTGCTTGGTCCCTGCTT 59.247 50.000 5.06 0.00 0.00 3.91
598 621 1.138859 GTTTTGCTTGGTCCCTGCTTT 59.861 47.619 5.06 0.00 0.00 3.51
599 622 1.039856 TTTGCTTGGTCCCTGCTTTC 58.960 50.000 5.06 0.00 0.00 2.62
600 623 0.827507 TTGCTTGGTCCCTGCTTTCC 60.828 55.000 5.06 0.00 0.00 3.13
601 624 1.075659 GCTTGGTCCCTGCTTTCCT 59.924 57.895 0.00 0.00 0.00 3.36
602 625 1.246737 GCTTGGTCCCTGCTTTCCTG 61.247 60.000 0.00 0.00 0.00 3.86
603 626 1.228552 TTGGTCCCTGCTTTCCTGC 60.229 57.895 0.00 0.00 0.00 4.85
604 627 1.719063 TTGGTCCCTGCTTTCCTGCT 61.719 55.000 0.00 0.00 0.00 4.24
605 628 1.377856 GGTCCCTGCTTTCCTGCTC 60.378 63.158 0.00 0.00 0.00 4.26
606 629 1.377856 GTCCCTGCTTTCCTGCTCC 60.378 63.158 0.00 0.00 0.00 4.70
607 630 1.847506 TCCCTGCTTTCCTGCTCCA 60.848 57.895 0.00 0.00 0.00 3.86
608 631 1.676967 CCCTGCTTTCCTGCTCCAC 60.677 63.158 0.00 0.00 0.00 4.02
609 632 1.676967 CCTGCTTTCCTGCTCCACC 60.677 63.158 0.00 0.00 0.00 4.61
610 633 1.073722 CTGCTTTCCTGCTCCACCA 59.926 57.895 0.00 0.00 0.00 4.17
611 634 0.538057 CTGCTTTCCTGCTCCACCAA 60.538 55.000 0.00 0.00 0.00 3.67
612 635 0.823356 TGCTTTCCTGCTCCACCAAC 60.823 55.000 0.00 0.00 0.00 3.77
613 636 1.527433 GCTTTCCTGCTCCACCAACC 61.527 60.000 0.00 0.00 0.00 3.77
614 637 0.111253 CTTTCCTGCTCCACCAACCT 59.889 55.000 0.00 0.00 0.00 3.50
615 638 0.110486 TTTCCTGCTCCACCAACCTC 59.890 55.000 0.00 0.00 0.00 3.85
616 639 0.768221 TTCCTGCTCCACCAACCTCT 60.768 55.000 0.00 0.00 0.00 3.69
617 640 0.768221 TCCTGCTCCACCAACCTCTT 60.768 55.000 0.00 0.00 0.00 2.85
618 641 0.322008 CCTGCTCCACCAACCTCTTC 60.322 60.000 0.00 0.00 0.00 2.87
619 642 0.322008 CTGCTCCACCAACCTCTTCC 60.322 60.000 0.00 0.00 0.00 3.46
620 643 0.768221 TGCTCCACCAACCTCTTCCT 60.768 55.000 0.00 0.00 0.00 3.36
621 644 0.035915 GCTCCACCAACCTCTTCCTC 60.036 60.000 0.00 0.00 0.00 3.71
622 645 1.650528 CTCCACCAACCTCTTCCTCT 58.349 55.000 0.00 0.00 0.00 3.69
623 646 1.552792 CTCCACCAACCTCTTCCTCTC 59.447 57.143 0.00 0.00 0.00 3.20
624 647 1.132849 TCCACCAACCTCTTCCTCTCA 60.133 52.381 0.00 0.00 0.00 3.27
625 648 1.912043 CCACCAACCTCTTCCTCTCAT 59.088 52.381 0.00 0.00 0.00 2.90
626 649 3.107601 CCACCAACCTCTTCCTCTCATA 58.892 50.000 0.00 0.00 0.00 2.15
627 650 3.118592 CCACCAACCTCTTCCTCTCATAC 60.119 52.174 0.00 0.00 0.00 2.39
628 651 3.108376 ACCAACCTCTTCCTCTCATACC 58.892 50.000 0.00 0.00 0.00 2.73
629 652 2.101582 CCAACCTCTTCCTCTCATACCG 59.898 54.545 0.00 0.00 0.00 4.02
630 653 3.024547 CAACCTCTTCCTCTCATACCGA 58.975 50.000 0.00 0.00 0.00 4.69
631 654 2.657143 ACCTCTTCCTCTCATACCGAC 58.343 52.381 0.00 0.00 0.00 4.79
632 655 2.242708 ACCTCTTCCTCTCATACCGACT 59.757 50.000 0.00 0.00 0.00 4.18
633 656 2.882137 CCTCTTCCTCTCATACCGACTC 59.118 54.545 0.00 0.00 0.00 3.36
634 657 2.882137 CTCTTCCTCTCATACCGACTCC 59.118 54.545 0.00 0.00 0.00 3.85
635 658 1.604755 CTTCCTCTCATACCGACTCCG 59.395 57.143 0.00 0.00 0.00 4.63
636 659 0.835276 TCCTCTCATACCGACTCCGA 59.165 55.000 0.00 0.00 38.22 4.55
637 660 1.202663 TCCTCTCATACCGACTCCGAG 60.203 57.143 0.00 0.00 38.22 4.63
638 661 0.589223 CTCTCATACCGACTCCGAGC 59.411 60.000 0.00 0.00 38.22 5.03
639 662 0.818445 TCTCATACCGACTCCGAGCC 60.818 60.000 0.00 0.00 38.22 4.70
640 663 2.119147 CTCATACCGACTCCGAGCCG 62.119 65.000 0.00 0.00 38.22 5.52
641 664 2.124403 ATACCGACTCCGAGCCGT 60.124 61.111 3.33 0.00 38.22 5.68
642 665 1.146930 ATACCGACTCCGAGCCGTA 59.853 57.895 3.33 0.00 38.22 4.02
643 666 0.883814 ATACCGACTCCGAGCCGTAG 60.884 60.000 3.33 0.00 38.22 3.51
644 667 1.960040 TACCGACTCCGAGCCGTAGA 61.960 60.000 3.33 0.00 38.22 2.59
645 668 2.535788 CCGACTCCGAGCCGTAGAG 61.536 68.421 3.33 0.00 38.22 2.43
646 669 2.535788 CGACTCCGAGCCGTAGAGG 61.536 68.421 0.00 0.00 39.90 3.69
655 678 3.458163 CCGTAGAGGCCCTCGCAA 61.458 66.667 4.80 0.00 35.36 4.85
656 679 2.202756 CGTAGAGGCCCTCGCAAC 60.203 66.667 4.80 4.57 35.36 4.17
657 680 2.978824 GTAGAGGCCCTCGCAACA 59.021 61.111 4.80 0.00 35.36 3.33
658 681 1.295423 GTAGAGGCCCTCGCAACAA 59.705 57.895 4.80 0.00 35.36 2.83
659 682 0.321298 GTAGAGGCCCTCGCAACAAA 60.321 55.000 4.80 0.00 35.36 2.83
660 683 0.036388 TAGAGGCCCTCGCAACAAAG 60.036 55.000 4.80 0.00 35.36 2.77
661 684 2.282462 AGGCCCTCGCAACAAAGG 60.282 61.111 0.00 0.00 36.38 3.11
662 685 4.056125 GGCCCTCGCAACAAAGGC 62.056 66.667 0.00 0.00 43.09 4.35
663 686 2.985847 GCCCTCGCAACAAAGGCT 60.986 61.111 0.00 0.00 40.57 4.58
664 687 2.956987 CCCTCGCAACAAAGGCTG 59.043 61.111 0.00 0.00 0.00 4.85
665 688 1.600636 CCCTCGCAACAAAGGCTGA 60.601 57.895 0.00 0.00 0.00 4.26
666 689 0.962356 CCCTCGCAACAAAGGCTGAT 60.962 55.000 0.00 0.00 0.00 2.90
667 690 0.449388 CCTCGCAACAAAGGCTGATC 59.551 55.000 0.00 0.00 0.00 2.92
668 691 1.446907 CTCGCAACAAAGGCTGATCT 58.553 50.000 0.00 0.00 0.00 2.75
669 692 1.396301 CTCGCAACAAAGGCTGATCTC 59.604 52.381 0.00 0.00 0.00 2.75
670 693 1.002430 TCGCAACAAAGGCTGATCTCT 59.998 47.619 0.00 0.00 0.00 3.10
671 694 1.129998 CGCAACAAAGGCTGATCTCTG 59.870 52.381 0.00 0.00 0.00 3.35
672 695 1.135460 GCAACAAAGGCTGATCTCTGC 60.135 52.381 0.00 0.83 39.66 4.26
673 696 2.434428 CAACAAAGGCTGATCTCTGCT 58.566 47.619 8.65 0.00 40.16 4.24
674 697 2.818432 CAACAAAGGCTGATCTCTGCTT 59.182 45.455 8.65 0.00 40.16 3.91
675 698 3.151912 ACAAAGGCTGATCTCTGCTTT 57.848 42.857 8.65 5.08 40.66 3.51
676 699 3.080319 ACAAAGGCTGATCTCTGCTTTC 58.920 45.455 6.84 0.00 38.69 2.62
677 700 2.416680 AAGGCTGATCTCTGCTTTCC 57.583 50.000 8.65 0.00 35.80 3.13
678 701 1.582389 AGGCTGATCTCTGCTTTCCT 58.418 50.000 8.65 0.00 40.16 3.36
679 702 1.209990 AGGCTGATCTCTGCTTTCCTG 59.790 52.381 8.65 0.00 40.16 3.86
680 703 1.015868 GCTGATCTCTGCTTTCCTGC 58.984 55.000 0.00 0.00 37.75 4.85
681 704 1.407162 GCTGATCTCTGCTTTCCTGCT 60.407 52.381 0.00 0.00 37.75 4.24
682 705 2.940527 GCTGATCTCTGCTTTCCTGCTT 60.941 50.000 0.00 0.00 37.75 3.91
683 706 2.678836 CTGATCTCTGCTTTCCTGCTTG 59.321 50.000 0.00 0.00 0.00 4.01
684 707 1.401199 GATCTCTGCTTTCCTGCTTGC 59.599 52.381 0.00 0.00 0.00 4.01
685 708 0.109153 TCTCTGCTTTCCTGCTTGCA 59.891 50.000 0.00 0.00 0.00 4.08
686 709 0.956633 CTCTGCTTTCCTGCTTGCAA 59.043 50.000 0.00 0.00 34.90 4.08
687 710 0.956633 TCTGCTTTCCTGCTTGCAAG 59.043 50.000 22.44 22.44 34.90 4.01
720 744 1.131693 CACTCACACGCCGACACTATA 59.868 52.381 0.00 0.00 0.00 1.31
739 763 2.743179 GCTACCCCTAGCCACCACC 61.743 68.421 0.00 0.00 39.79 4.61
754 778 3.083997 ACCGATGCTCCACCCCTC 61.084 66.667 0.00 0.00 0.00 4.30
1454 1489 3.691342 CGTGAAGGCCAGGGACGA 61.691 66.667 5.01 0.00 31.71 4.20
1718 1807 1.562008 GAGAAGAAGGGGAAGAAGGGG 59.438 57.143 0.00 0.00 0.00 4.79
2283 2392 5.865085 AGGTGAGTTTGTTCTGTGCTTATA 58.135 37.500 0.00 0.00 0.00 0.98
2284 2393 6.296026 AGGTGAGTTTGTTCTGTGCTTATAA 58.704 36.000 0.00 0.00 0.00 0.98
4111 4375 3.264104 GCACGGGCATTTGTACTAGTAA 58.736 45.455 3.77 0.00 40.72 2.24
4112 4376 3.875134 GCACGGGCATTTGTACTAGTAAT 59.125 43.478 3.77 0.00 40.72 1.89
4113 4377 4.334481 GCACGGGCATTTGTACTAGTAATT 59.666 41.667 3.77 0.00 40.72 1.40
4114 4378 5.524646 GCACGGGCATTTGTACTAGTAATTA 59.475 40.000 3.77 0.00 40.72 1.40
4115 4379 6.037391 GCACGGGCATTTGTACTAGTAATTAA 59.963 38.462 3.77 0.00 40.72 1.40
4116 4380 7.414319 GCACGGGCATTTGTACTAGTAATTAAA 60.414 37.037 3.77 7.33 40.72 1.52
4117 4381 8.452534 CACGGGCATTTGTACTAGTAATTAAAA 58.547 33.333 3.61 4.28 0.00 1.52
4118 4382 9.012161 ACGGGCATTTGTACTAGTAATTAAAAA 57.988 29.630 3.61 1.97 0.00 1.94
4136 4400 4.796038 AAAAATGTTGCTGAGCATAGCT 57.204 36.364 8.44 0.00 44.01 3.32
4137 4401 3.777465 AAATGTTGCTGAGCATAGCTG 57.223 42.857 8.44 0.00 44.01 4.24
4138 4402 2.704464 ATGTTGCTGAGCATAGCTGA 57.296 45.000 8.44 0.00 44.01 4.26
4139 4403 2.704464 TGTTGCTGAGCATAGCTGAT 57.296 45.000 8.44 0.00 44.01 2.90
4140 4404 2.285977 TGTTGCTGAGCATAGCTGATG 58.714 47.619 8.44 0.00 44.01 3.07
4152 4416 5.503662 CATAGCTGATGCAACAATACCAA 57.496 39.130 0.00 0.00 42.74 3.67
4153 4417 5.516996 CATAGCTGATGCAACAATACCAAG 58.483 41.667 0.00 0.00 42.74 3.61
4154 4418 2.756760 AGCTGATGCAACAATACCAAGG 59.243 45.455 0.00 0.00 42.74 3.61
4155 4419 2.754552 GCTGATGCAACAATACCAAGGA 59.245 45.455 0.00 0.00 39.41 3.36
4156 4420 3.193267 GCTGATGCAACAATACCAAGGAA 59.807 43.478 0.00 0.00 39.41 3.36
4157 4421 4.142093 GCTGATGCAACAATACCAAGGAAT 60.142 41.667 0.00 0.00 39.41 3.01
4158 4422 5.327616 TGATGCAACAATACCAAGGAATG 57.672 39.130 0.00 0.00 0.00 2.67
4159 4423 4.771577 TGATGCAACAATACCAAGGAATGT 59.228 37.500 0.00 0.00 0.00 2.71
4160 4424 5.245751 TGATGCAACAATACCAAGGAATGTT 59.754 36.000 0.00 0.00 34.74 2.71
4161 4425 5.543507 TGCAACAATACCAAGGAATGTTT 57.456 34.783 0.00 0.00 32.25 2.83
4162 4426 5.923204 TGCAACAATACCAAGGAATGTTTT 58.077 33.333 0.00 0.00 32.25 2.43
4163 4427 5.988561 TGCAACAATACCAAGGAATGTTTTC 59.011 36.000 0.00 0.00 32.25 2.29
4164 4428 6.183360 TGCAACAATACCAAGGAATGTTTTCT 60.183 34.615 0.00 0.00 32.25 2.52
4165 4429 7.014711 TGCAACAATACCAAGGAATGTTTTCTA 59.985 33.333 0.00 0.00 32.25 2.10
4166 4430 8.034804 GCAACAATACCAAGGAATGTTTTCTAT 58.965 33.333 0.00 0.00 32.25 1.98
4167 4431 9.573133 CAACAATACCAAGGAATGTTTTCTATC 57.427 33.333 0.00 0.00 32.25 2.08
4168 4432 9.533831 AACAATACCAAGGAATGTTTTCTATCT 57.466 29.630 0.00 0.00 30.50 1.98
4169 4433 9.533831 ACAATACCAAGGAATGTTTTCTATCTT 57.466 29.630 0.00 0.00 32.16 2.40
4218 4482 5.314923 TCAAACGTATAGGTAGGACACAC 57.685 43.478 0.00 0.00 0.00 3.82
4258 4522 5.458041 AATATCTTCATGAAAATGGCCGG 57.542 39.130 9.88 0.00 0.00 6.13
4263 4527 5.139727 TCTTCATGAAAATGGCCGGAATAT 58.860 37.500 5.05 0.00 0.00 1.28
4264 4528 6.303054 TCTTCATGAAAATGGCCGGAATATA 58.697 36.000 5.05 0.00 0.00 0.86
4265 4529 6.775142 TCTTCATGAAAATGGCCGGAATATAA 59.225 34.615 5.05 0.00 0.00 0.98
4266 4530 7.451255 TCTTCATGAAAATGGCCGGAATATAAT 59.549 33.333 5.05 0.00 0.00 1.28
4267 4531 7.537596 TCATGAAAATGGCCGGAATATAATT 57.462 32.000 5.05 0.00 0.00 1.40
4268 4532 8.642935 TCATGAAAATGGCCGGAATATAATTA 57.357 30.769 5.05 0.00 0.00 1.40
4269 4533 9.253832 TCATGAAAATGGCCGGAATATAATTAT 57.746 29.630 5.05 2.97 0.00 1.28
4270 4534 9.304731 CATGAAAATGGCCGGAATATAATTATG 57.695 33.333 5.05 0.00 0.00 1.90
4271 4535 8.415950 TGAAAATGGCCGGAATATAATTATGT 57.584 30.769 5.05 0.00 0.00 2.29
4272 4536 9.521841 TGAAAATGGCCGGAATATAATTATGTA 57.478 29.630 5.05 0.00 0.00 2.29
4319 4583 9.944376 AGTTAGAAAGAAGATACAAACTATGCA 57.056 29.630 0.00 0.00 0.00 3.96
4321 4585 9.944376 TTAGAAAGAAGATACAAACTATGCAGT 57.056 29.630 0.00 0.00 36.19 4.40
4323 4587 9.944376 AGAAAGAAGATACAAACTATGCAGTAA 57.056 29.630 0.00 0.00 33.48 2.24
4326 4590 9.502091 AAGAAGATACAAACTATGCAGTAAACA 57.498 29.630 0.00 0.00 33.48 2.83
4327 4591 9.502091 AGAAGATACAAACTATGCAGTAAACAA 57.498 29.630 0.00 0.00 33.48 2.83
4330 4594 8.730680 AGATACAAACTATGCAGTAAACAAAGG 58.269 33.333 0.00 0.00 33.48 3.11
4331 4595 6.709018 ACAAACTATGCAGTAAACAAAGGT 57.291 33.333 0.00 0.00 33.48 3.50
4332 4596 6.735130 ACAAACTATGCAGTAAACAAAGGTC 58.265 36.000 0.00 0.00 33.48 3.85
4333 4597 6.320164 ACAAACTATGCAGTAAACAAAGGTCA 59.680 34.615 0.00 0.00 33.48 4.02
4334 4598 7.014230 ACAAACTATGCAGTAAACAAAGGTCAT 59.986 33.333 0.00 0.00 33.48 3.06
4335 4599 6.743575 ACTATGCAGTAAACAAAGGTCATC 57.256 37.500 0.00 0.00 31.45 2.92
4336 4600 6.237901 ACTATGCAGTAAACAAAGGTCATCA 58.762 36.000 0.00 0.00 31.45 3.07
4337 4601 6.886459 ACTATGCAGTAAACAAAGGTCATCAT 59.114 34.615 0.00 0.00 31.45 2.45
4338 4602 8.046708 ACTATGCAGTAAACAAAGGTCATCATA 58.953 33.333 0.00 0.00 31.45 2.15
4339 4603 6.494893 TGCAGTAAACAAAGGTCATCATAC 57.505 37.500 0.00 0.00 0.00 2.39
4340 4604 5.414454 TGCAGTAAACAAAGGTCATCATACC 59.586 40.000 0.00 0.00 40.06 2.73
4341 4605 5.414454 GCAGTAAACAAAGGTCATCATACCA 59.586 40.000 0.00 0.00 42.40 3.25
4342 4606 6.072175 GCAGTAAACAAAGGTCATCATACCAA 60.072 38.462 0.00 0.00 42.40 3.67
4343 4607 7.523052 GCAGTAAACAAAGGTCATCATACCAAA 60.523 37.037 0.00 0.00 42.40 3.28
4344 4608 8.023128 CAGTAAACAAAGGTCATCATACCAAAG 58.977 37.037 0.00 0.00 42.40 2.77
4345 4609 7.942341 AGTAAACAAAGGTCATCATACCAAAGA 59.058 33.333 0.00 0.00 42.40 2.52
4346 4610 7.781324 AAACAAAGGTCATCATACCAAAGAT 57.219 32.000 0.00 0.00 42.40 2.40
4347 4611 8.877864 AAACAAAGGTCATCATACCAAAGATA 57.122 30.769 0.00 0.00 42.40 1.98
4348 4612 9.479549 AAACAAAGGTCATCATACCAAAGATAT 57.520 29.630 0.00 0.00 42.40 1.63
4349 4613 8.455903 ACAAAGGTCATCATACCAAAGATATG 57.544 34.615 0.00 0.00 42.40 1.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.631062 AGTCACATGTTCGGTAGACCAA 59.369 45.455 0.00 0.00 35.14 3.67
19 20 3.328382 TTCCCTTAGTCACATGTTCGG 57.672 47.619 0.00 0.00 0.00 4.30
20 21 3.684788 CCTTTCCCTTAGTCACATGTTCG 59.315 47.826 0.00 0.00 0.00 3.95
28 29 7.906199 TGAAAATTTTCCTTTCCCTTAGTCA 57.094 32.000 24.51 2.37 36.36 3.41
170 173 5.081032 CACTAGGCTAGCCCTTAACTAGAT 58.919 45.833 30.42 10.09 43.06 1.98
175 178 1.485066 TGCACTAGGCTAGCCCTTAAC 59.515 52.381 30.42 17.38 43.06 2.01
178 181 0.618968 ACTGCACTAGGCTAGCCCTT 60.619 55.000 30.42 15.60 43.06 3.95
185 188 1.978580 ACTTAACCACTGCACTAGGCT 59.021 47.619 0.00 0.00 45.15 4.58
190 193 2.290323 GGGATGACTTAACCACTGCACT 60.290 50.000 0.00 0.00 0.00 4.40
192 195 1.004277 GGGGATGACTTAACCACTGCA 59.996 52.381 0.00 0.00 0.00 4.41
234 237 2.297701 TGCAGAGAGGTTGGTTTGAAC 58.702 47.619 0.00 0.00 0.00 3.18
235 238 2.727123 TGCAGAGAGGTTGGTTTGAA 57.273 45.000 0.00 0.00 0.00 2.69
236 239 2.886523 CAATGCAGAGAGGTTGGTTTGA 59.113 45.455 0.00 0.00 0.00 2.69
237 240 2.608752 GCAATGCAGAGAGGTTGGTTTG 60.609 50.000 0.00 0.00 0.00 2.93
238 241 1.615392 GCAATGCAGAGAGGTTGGTTT 59.385 47.619 0.00 0.00 0.00 3.27
239 242 1.251251 GCAATGCAGAGAGGTTGGTT 58.749 50.000 0.00 0.00 0.00 3.67
240 243 0.111061 TGCAATGCAGAGAGGTTGGT 59.889 50.000 2.72 0.00 33.32 3.67
241 244 0.524862 GTGCAATGCAGAGAGGTTGG 59.475 55.000 8.73 0.00 40.08 3.77
242 245 1.531423 AGTGCAATGCAGAGAGGTTG 58.469 50.000 8.73 0.00 40.08 3.77
243 246 2.283145 AAGTGCAATGCAGAGAGGTT 57.717 45.000 8.73 0.00 40.08 3.50
244 247 1.884579 CAAAGTGCAATGCAGAGAGGT 59.115 47.619 8.73 0.00 40.08 3.85
245 248 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
246 249 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
257 260 2.716217 AGACTTATCCCTGCAAAGTGC 58.284 47.619 5.48 0.00 45.29 4.40
258 261 3.865745 CGTAGACTTATCCCTGCAAAGTG 59.134 47.826 5.48 0.00 33.72 3.16
259 262 3.514309 ACGTAGACTTATCCCTGCAAAGT 59.486 43.478 0.36 0.36 36.20 2.66
260 263 4.124851 ACGTAGACTTATCCCTGCAAAG 57.875 45.455 0.00 0.00 0.00 2.77
261 264 4.501071 GAACGTAGACTTATCCCTGCAAA 58.499 43.478 0.00 0.00 0.00 3.68
262 265 3.118884 GGAACGTAGACTTATCCCTGCAA 60.119 47.826 0.00 0.00 0.00 4.08
263 266 2.429610 GGAACGTAGACTTATCCCTGCA 59.570 50.000 0.00 0.00 0.00 4.41
264 267 2.694109 AGGAACGTAGACTTATCCCTGC 59.306 50.000 0.00 0.00 0.00 4.85
265 268 7.756395 TTATAGGAACGTAGACTTATCCCTG 57.244 40.000 0.00 0.00 0.00 4.45
266 269 7.614974 GGATTATAGGAACGTAGACTTATCCCT 59.385 40.741 0.00 0.00 0.00 4.20
267 270 7.147932 GGGATTATAGGAACGTAGACTTATCCC 60.148 44.444 13.33 13.33 0.00 3.85
268 271 7.614974 AGGGATTATAGGAACGTAGACTTATCC 59.385 40.741 0.00 0.00 0.00 2.59
269 272 8.578448 AGGGATTATAGGAACGTAGACTTATC 57.422 38.462 0.00 0.00 0.00 1.75
270 273 8.953223 AAGGGATTATAGGAACGTAGACTTAT 57.047 34.615 0.00 0.00 0.00 1.73
271 274 7.449704 GGAAGGGATTATAGGAACGTAGACTTA 59.550 40.741 0.00 0.00 0.00 2.24
272 275 6.267242 GGAAGGGATTATAGGAACGTAGACTT 59.733 42.308 0.00 0.00 0.00 3.01
273 276 5.774184 GGAAGGGATTATAGGAACGTAGACT 59.226 44.000 0.00 0.00 0.00 3.24
274 277 5.335504 CGGAAGGGATTATAGGAACGTAGAC 60.336 48.000 0.00 0.00 0.00 2.59
275 278 4.763793 CGGAAGGGATTATAGGAACGTAGA 59.236 45.833 0.00 0.00 0.00 2.59
276 279 4.763793 TCGGAAGGGATTATAGGAACGTAG 59.236 45.833 0.00 0.00 0.00 3.51
277 280 4.728772 TCGGAAGGGATTATAGGAACGTA 58.271 43.478 0.00 0.00 0.00 3.57
295 298 2.203182 ACAAGGTGGGGTCTCGGA 59.797 61.111 0.00 0.00 0.00 4.55
298 301 0.613777 CCTACACAAGGTGGGGTCTC 59.386 60.000 1.07 0.00 44.04 3.36
299 302 2.773458 CCTACACAAGGTGGGGTCT 58.227 57.895 1.07 0.00 44.04 3.85
312 315 2.432146 CCAGTGCATAGAAGCTCCTACA 59.568 50.000 0.00 0.00 34.99 2.74
315 318 0.835941 CCCAGTGCATAGAAGCTCCT 59.164 55.000 0.00 0.00 34.99 3.69
332 335 0.261696 ACATAAGGTGAATGGGCCCC 59.738 55.000 22.27 3.99 0.00 5.80
345 368 8.395633 GTGGTTAATTGCTACCAAGTACATAAG 58.604 37.037 9.61 0.00 45.45 1.73
358 381 4.277174 CACTGGTGTTGTGGTTAATTGCTA 59.723 41.667 0.00 0.00 0.00 3.49
374 397 2.554032 GGAATGAGGAACAACACTGGTG 59.446 50.000 0.00 0.00 0.00 4.17
375 398 2.174639 TGGAATGAGGAACAACACTGGT 59.825 45.455 0.00 0.00 0.00 4.00
376 399 2.554032 GTGGAATGAGGAACAACACTGG 59.446 50.000 0.00 0.00 32.79 4.00
377 400 3.480470 AGTGGAATGAGGAACAACACTG 58.520 45.455 0.00 0.00 39.06 3.66
378 401 3.392616 AGAGTGGAATGAGGAACAACACT 59.607 43.478 0.00 0.00 41.25 3.55
379 402 3.499918 CAGAGTGGAATGAGGAACAACAC 59.500 47.826 0.00 0.00 34.39 3.32
380 403 3.136443 ACAGAGTGGAATGAGGAACAACA 59.864 43.478 0.00 0.00 0.00 3.33
381 404 3.499918 CACAGAGTGGAATGAGGAACAAC 59.500 47.826 0.00 0.00 0.00 3.32
382 405 3.743521 CACAGAGTGGAATGAGGAACAA 58.256 45.455 0.00 0.00 0.00 2.83
383 406 2.550855 GCACAGAGTGGAATGAGGAACA 60.551 50.000 0.00 0.00 33.64 3.18
384 407 2.079925 GCACAGAGTGGAATGAGGAAC 58.920 52.381 0.00 0.00 33.64 3.62
385 408 1.003580 GGCACAGAGTGGAATGAGGAA 59.996 52.381 0.00 0.00 33.64 3.36
386 409 0.615331 GGCACAGAGTGGAATGAGGA 59.385 55.000 0.00 0.00 33.64 3.71
387 410 0.742281 CGGCACAGAGTGGAATGAGG 60.742 60.000 0.00 0.00 33.64 3.86
388 411 1.364626 GCGGCACAGAGTGGAATGAG 61.365 60.000 0.00 0.00 33.64 2.90
389 412 1.375908 GCGGCACAGAGTGGAATGA 60.376 57.895 0.00 0.00 33.64 2.57
390 413 2.401766 GGCGGCACAGAGTGGAATG 61.402 63.158 3.07 0.00 33.64 2.67
391 414 2.045926 GGCGGCACAGAGTGGAAT 60.046 61.111 3.07 0.00 33.64 3.01
392 415 3.240134 GAGGCGGCACAGAGTGGAA 62.240 63.158 13.08 0.00 33.64 3.53
393 416 3.695606 GAGGCGGCACAGAGTGGA 61.696 66.667 13.08 0.00 33.64 4.02
394 417 3.699894 AGAGGCGGCACAGAGTGG 61.700 66.667 13.08 0.00 33.64 4.00
395 418 2.433838 CAGAGGCGGCACAGAGTG 60.434 66.667 13.08 0.00 36.51 3.51
396 419 4.385405 GCAGAGGCGGCACAGAGT 62.385 66.667 13.08 0.00 0.00 3.24
406 429 0.534652 CAAGGGATAGCAGCAGAGGC 60.535 60.000 0.00 0.00 41.61 4.70
407 430 0.835941 ACAAGGGATAGCAGCAGAGG 59.164 55.000 0.00 0.00 0.00 3.69
408 431 3.118629 TGTTACAAGGGATAGCAGCAGAG 60.119 47.826 0.00 0.00 0.00 3.35
409 432 2.837591 TGTTACAAGGGATAGCAGCAGA 59.162 45.455 0.00 0.00 0.00 4.26
410 433 3.201290 CTGTTACAAGGGATAGCAGCAG 58.799 50.000 0.00 0.00 0.00 4.24
411 434 3.266510 CTGTTACAAGGGATAGCAGCA 57.733 47.619 0.00 0.00 0.00 4.41
412 435 1.943340 GCTGTTACAAGGGATAGCAGC 59.057 52.381 5.32 5.32 45.55 5.25
413 436 3.201290 CAGCTGTTACAAGGGATAGCAG 58.799 50.000 5.25 0.00 34.86 4.24
414 437 2.680805 GCAGCTGTTACAAGGGATAGCA 60.681 50.000 16.64 0.00 33.81 3.49
415 438 1.943340 GCAGCTGTTACAAGGGATAGC 59.057 52.381 16.64 0.00 0.00 2.97
416 439 3.550437 AGCAGCTGTTACAAGGGATAG 57.450 47.619 16.64 0.00 0.00 2.08
417 440 3.609853 CAAGCAGCTGTTACAAGGGATA 58.390 45.455 16.64 0.00 0.00 2.59
418 441 2.440409 CAAGCAGCTGTTACAAGGGAT 58.560 47.619 16.64 0.00 0.00 3.85
419 442 1.896220 CAAGCAGCTGTTACAAGGGA 58.104 50.000 16.64 0.00 0.00 4.20
420 443 0.242017 GCAAGCAGCTGTTACAAGGG 59.758 55.000 16.64 0.00 41.15 3.95
421 444 0.110056 CGCAAGCAGCTGTTACAAGG 60.110 55.000 16.64 0.00 42.61 3.61
422 445 3.373020 CGCAAGCAGCTGTTACAAG 57.627 52.632 16.64 1.88 42.61 3.16
435 458 2.674380 AGGAAAGCAGGGCGCAAG 60.674 61.111 10.83 0.00 46.13 4.01
436 459 2.985282 CAGGAAAGCAGGGCGCAA 60.985 61.111 10.83 0.00 46.13 4.85
439 462 3.130160 GAGCAGGAAAGCAGGGCG 61.130 66.667 0.00 0.00 36.85 6.13
440 463 2.753446 GGAGCAGGAAAGCAGGGC 60.753 66.667 0.00 0.00 36.85 5.19
441 464 1.676967 GTGGAGCAGGAAAGCAGGG 60.677 63.158 0.00 0.00 36.85 4.45
442 465 1.676967 GGTGGAGCAGGAAAGCAGG 60.677 63.158 0.00 0.00 36.85 4.85
443 466 2.037136 CGGTGGAGCAGGAAAGCAG 61.037 63.158 0.00 0.00 36.85 4.24
444 467 2.032528 CGGTGGAGCAGGAAAGCA 59.967 61.111 0.00 0.00 36.85 3.91
445 468 2.035442 GTCGGTGGAGCAGGAAAGC 61.035 63.158 0.00 0.00 0.00 3.51
446 469 1.376037 GGTCGGTGGAGCAGGAAAG 60.376 63.158 0.00 0.00 40.40 2.62
447 470 1.827399 GAGGTCGGTGGAGCAGGAAA 61.827 60.000 0.00 0.00 43.12 3.13
448 471 2.203788 AGGTCGGTGGAGCAGGAA 60.204 61.111 0.00 0.00 43.12 3.36
449 472 2.680352 GAGGTCGGTGGAGCAGGA 60.680 66.667 0.00 0.00 43.12 3.86
450 473 2.681778 AGAGGTCGGTGGAGCAGG 60.682 66.667 0.00 0.00 43.12 4.85
451 474 2.716017 GGAGAGGTCGGTGGAGCAG 61.716 68.421 0.00 0.00 43.12 4.24
452 475 2.680352 GGAGAGGTCGGTGGAGCA 60.680 66.667 0.00 0.00 43.12 4.26
453 476 1.617947 AATGGAGAGGTCGGTGGAGC 61.618 60.000 0.00 0.00 40.99 4.70
454 477 0.461961 GAATGGAGAGGTCGGTGGAG 59.538 60.000 0.00 0.00 0.00 3.86
455 478 0.041238 AGAATGGAGAGGTCGGTGGA 59.959 55.000 0.00 0.00 0.00 4.02
456 479 0.461961 GAGAATGGAGAGGTCGGTGG 59.538 60.000 0.00 0.00 0.00 4.61
457 480 1.186200 TGAGAATGGAGAGGTCGGTG 58.814 55.000 0.00 0.00 0.00 4.94
458 481 2.166907 ATGAGAATGGAGAGGTCGGT 57.833 50.000 0.00 0.00 0.00 4.69
459 482 2.297597 GGTATGAGAATGGAGAGGTCGG 59.702 54.545 0.00 0.00 0.00 4.79
460 483 2.030717 CGGTATGAGAATGGAGAGGTCG 60.031 54.545 0.00 0.00 0.00 4.79
461 484 3.223435 TCGGTATGAGAATGGAGAGGTC 58.777 50.000 0.00 0.00 0.00 3.85
462 485 3.314307 TCGGTATGAGAATGGAGAGGT 57.686 47.619 0.00 0.00 0.00 3.85
473 496 1.800655 GCAGCAGTGTCTCGGTATGAG 60.801 57.143 0.00 0.00 46.72 2.90
474 497 0.173481 GCAGCAGTGTCTCGGTATGA 59.827 55.000 0.00 0.00 0.00 2.15
475 498 0.807667 GGCAGCAGTGTCTCGGTATG 60.808 60.000 0.00 0.00 0.00 2.39
476 499 1.517832 GGCAGCAGTGTCTCGGTAT 59.482 57.895 0.00 0.00 0.00 2.73
477 500 2.646175 GGGCAGCAGTGTCTCGGTA 61.646 63.158 0.00 0.00 0.00 4.02
478 501 4.008933 GGGCAGCAGTGTCTCGGT 62.009 66.667 0.00 0.00 0.00 4.69
479 502 3.655810 GAGGGCAGCAGTGTCTCGG 62.656 68.421 0.00 0.00 0.00 4.63
480 503 2.125753 GAGGGCAGCAGTGTCTCG 60.126 66.667 0.00 0.00 0.00 4.04
481 504 2.125753 CGAGGGCAGCAGTGTCTC 60.126 66.667 0.00 0.00 0.00 3.36
482 505 4.385405 GCGAGGGCAGCAGTGTCT 62.385 66.667 0.00 0.00 39.62 3.41
490 513 3.114616 CAGTTGTCGCGAGGGCAG 61.115 66.667 10.24 0.00 39.92 4.85
492 515 3.642778 TAGCAGTTGTCGCGAGGGC 62.643 63.158 10.24 9.25 0.00 5.19
493 516 0.460284 ATTAGCAGTTGTCGCGAGGG 60.460 55.000 10.24 0.00 0.00 4.30
494 517 0.924090 GATTAGCAGTTGTCGCGAGG 59.076 55.000 10.24 0.00 0.00 4.63
495 518 1.849219 GAGATTAGCAGTTGTCGCGAG 59.151 52.381 10.24 0.00 0.00 5.03
496 519 1.472878 AGAGATTAGCAGTTGTCGCGA 59.527 47.619 3.71 3.71 0.00 5.87
497 520 1.585668 CAGAGATTAGCAGTTGTCGCG 59.414 52.381 0.00 0.00 0.00 5.87
498 521 1.325943 GCAGAGATTAGCAGTTGTCGC 59.674 52.381 0.00 0.00 0.00 5.19
499 522 2.886081 AGCAGAGATTAGCAGTTGTCG 58.114 47.619 0.00 0.00 0.00 4.35
500 523 4.094146 GGAAAGCAGAGATTAGCAGTTGTC 59.906 45.833 0.00 0.00 0.00 3.18
501 524 4.006319 GGAAAGCAGAGATTAGCAGTTGT 58.994 43.478 0.00 0.00 0.00 3.32
502 525 4.094590 CAGGAAAGCAGAGATTAGCAGTTG 59.905 45.833 0.00 0.00 0.00 3.16
503 526 4.260170 CAGGAAAGCAGAGATTAGCAGTT 58.740 43.478 0.00 0.00 0.00 3.16
504 527 3.871485 CAGGAAAGCAGAGATTAGCAGT 58.129 45.455 0.00 0.00 0.00 4.40
505 528 2.613133 GCAGGAAAGCAGAGATTAGCAG 59.387 50.000 0.00 0.00 0.00 4.24
506 529 2.238144 AGCAGGAAAGCAGAGATTAGCA 59.762 45.455 0.00 0.00 36.85 3.49
507 530 2.871633 GAGCAGGAAAGCAGAGATTAGC 59.128 50.000 0.00 0.00 36.85 3.09
508 531 4.141981 TGAGAGCAGGAAAGCAGAGATTAG 60.142 45.833 0.00 0.00 36.85 1.73
509 532 3.771479 TGAGAGCAGGAAAGCAGAGATTA 59.229 43.478 0.00 0.00 36.85 1.75
510 533 2.570752 TGAGAGCAGGAAAGCAGAGATT 59.429 45.455 0.00 0.00 36.85 2.40
511 534 2.186243 TGAGAGCAGGAAAGCAGAGAT 58.814 47.619 0.00 0.00 36.85 2.75
512 535 1.637338 TGAGAGCAGGAAAGCAGAGA 58.363 50.000 0.00 0.00 36.85 3.10
513 536 2.348660 CTTGAGAGCAGGAAAGCAGAG 58.651 52.381 0.00 0.00 36.85 3.35
514 537 2.469274 CTTGAGAGCAGGAAAGCAGA 57.531 50.000 0.00 0.00 36.85 4.26
526 549 0.179936 GGAGGGTGATGGCTTGAGAG 59.820 60.000 0.00 0.00 0.00 3.20
527 550 0.252881 AGGAGGGTGATGGCTTGAGA 60.253 55.000 0.00 0.00 0.00 3.27
528 551 1.139853 GTAGGAGGGTGATGGCTTGAG 59.860 57.143 0.00 0.00 0.00 3.02
529 552 1.204146 GTAGGAGGGTGATGGCTTGA 58.796 55.000 0.00 0.00 0.00 3.02
530 553 1.139853 GAGTAGGAGGGTGATGGCTTG 59.860 57.143 0.00 0.00 0.00 4.01
531 554 1.273838 TGAGTAGGAGGGTGATGGCTT 60.274 52.381 0.00 0.00 0.00 4.35
532 555 0.339859 TGAGTAGGAGGGTGATGGCT 59.660 55.000 0.00 0.00 0.00 4.75
533 556 0.466124 GTGAGTAGGAGGGTGATGGC 59.534 60.000 0.00 0.00 0.00 4.40
534 557 1.866015 TGTGAGTAGGAGGGTGATGG 58.134 55.000 0.00 0.00 0.00 3.51
535 558 2.484417 GCATGTGAGTAGGAGGGTGATG 60.484 54.545 0.00 0.00 0.00 3.07
536 559 1.765314 GCATGTGAGTAGGAGGGTGAT 59.235 52.381 0.00 0.00 0.00 3.06
537 560 1.195115 GCATGTGAGTAGGAGGGTGA 58.805 55.000 0.00 0.00 0.00 4.02
538 561 1.134580 CAGCATGTGAGTAGGAGGGTG 60.135 57.143 0.00 0.00 0.00 4.61
539 562 1.198713 CAGCATGTGAGTAGGAGGGT 58.801 55.000 0.00 0.00 0.00 4.34
540 563 1.411977 CTCAGCATGTGAGTAGGAGGG 59.588 57.143 13.84 0.00 46.89 4.30
541 564 2.886862 CTCAGCATGTGAGTAGGAGG 57.113 55.000 13.84 0.00 46.89 4.30
556 579 1.002888 ACAATGGTGCTGGAGTCTCAG 59.997 52.381 1.47 4.71 37.79 3.35
557 580 1.059098 ACAATGGTGCTGGAGTCTCA 58.941 50.000 1.47 0.00 0.00 3.27
558 581 1.808945 CAACAATGGTGCTGGAGTCTC 59.191 52.381 0.00 0.00 0.00 3.36
559 582 1.143684 ACAACAATGGTGCTGGAGTCT 59.856 47.619 0.00 0.00 0.00 3.24
560 583 1.609208 ACAACAATGGTGCTGGAGTC 58.391 50.000 0.00 0.00 0.00 3.36
561 584 2.071778 AACAACAATGGTGCTGGAGT 57.928 45.000 0.00 0.00 0.00 3.85
562 585 3.125316 CAAAACAACAATGGTGCTGGAG 58.875 45.455 0.00 0.00 0.00 3.86
563 586 2.741228 GCAAAACAACAATGGTGCTGGA 60.741 45.455 0.00 0.00 33.01 3.86
564 587 1.598601 GCAAAACAACAATGGTGCTGG 59.401 47.619 0.00 0.00 33.01 4.85
565 588 2.553086 AGCAAAACAACAATGGTGCTG 58.447 42.857 0.00 0.00 39.97 4.41
566 589 2.937799 CAAGCAAAACAACAATGGTGCT 59.062 40.909 0.00 0.00 41.90 4.40
567 590 2.031930 CCAAGCAAAACAACAATGGTGC 59.968 45.455 0.00 0.00 34.81 5.01
568 591 3.269178 ACCAAGCAAAACAACAATGGTG 58.731 40.909 0.00 0.00 38.22 4.17
577 600 0.396974 AGCAGGGACCAAGCAAAACA 60.397 50.000 9.70 0.00 0.00 2.83
578 601 0.752658 AAGCAGGGACCAAGCAAAAC 59.247 50.000 9.70 0.00 0.00 2.43
579 602 1.412343 GAAAGCAGGGACCAAGCAAAA 59.588 47.619 9.70 0.00 0.00 2.44
580 603 1.039856 GAAAGCAGGGACCAAGCAAA 58.960 50.000 9.70 0.00 0.00 3.68
581 604 0.827507 GGAAAGCAGGGACCAAGCAA 60.828 55.000 9.70 0.00 0.00 3.91
582 605 1.228552 GGAAAGCAGGGACCAAGCA 60.229 57.895 9.70 0.00 0.00 3.91
583 606 1.075659 AGGAAAGCAGGGACCAAGC 59.924 57.895 0.00 0.00 0.00 4.01
584 607 1.246737 GCAGGAAAGCAGGGACCAAG 61.247 60.000 0.00 0.00 0.00 3.61
585 608 1.228552 GCAGGAAAGCAGGGACCAA 60.229 57.895 0.00 0.00 0.00 3.67
586 609 2.129555 GAGCAGGAAAGCAGGGACCA 62.130 60.000 0.00 0.00 36.85 4.02
587 610 1.377856 GAGCAGGAAAGCAGGGACC 60.378 63.158 0.00 0.00 36.85 4.46
588 611 1.377856 GGAGCAGGAAAGCAGGGAC 60.378 63.158 0.00 0.00 36.85 4.46
589 612 1.847506 TGGAGCAGGAAAGCAGGGA 60.848 57.895 0.00 0.00 36.85 4.20
590 613 1.676967 GTGGAGCAGGAAAGCAGGG 60.677 63.158 0.00 0.00 36.85 4.45
591 614 1.676967 GGTGGAGCAGGAAAGCAGG 60.677 63.158 0.00 0.00 36.85 4.85
592 615 0.538057 TTGGTGGAGCAGGAAAGCAG 60.538 55.000 0.00 0.00 36.85 4.24
593 616 0.823356 GTTGGTGGAGCAGGAAAGCA 60.823 55.000 0.00 0.00 36.85 3.91
594 617 1.527433 GGTTGGTGGAGCAGGAAAGC 61.527 60.000 0.00 0.00 0.00 3.51
595 618 0.111253 AGGTTGGTGGAGCAGGAAAG 59.889 55.000 0.00 0.00 0.00 2.62
596 619 0.110486 GAGGTTGGTGGAGCAGGAAA 59.890 55.000 0.00 0.00 0.00 3.13
597 620 0.768221 AGAGGTTGGTGGAGCAGGAA 60.768 55.000 0.00 0.00 0.00 3.36
598 621 0.768221 AAGAGGTTGGTGGAGCAGGA 60.768 55.000 0.00 0.00 0.00 3.86
599 622 0.322008 GAAGAGGTTGGTGGAGCAGG 60.322 60.000 0.00 0.00 0.00 4.85
600 623 0.322008 GGAAGAGGTTGGTGGAGCAG 60.322 60.000 0.00 0.00 0.00 4.24
601 624 0.768221 AGGAAGAGGTTGGTGGAGCA 60.768 55.000 0.00 0.00 0.00 4.26
602 625 0.035915 GAGGAAGAGGTTGGTGGAGC 60.036 60.000 0.00 0.00 0.00 4.70
603 626 1.552792 GAGAGGAAGAGGTTGGTGGAG 59.447 57.143 0.00 0.00 0.00 3.86
604 627 1.132849 TGAGAGGAAGAGGTTGGTGGA 60.133 52.381 0.00 0.00 0.00 4.02
605 628 1.352083 TGAGAGGAAGAGGTTGGTGG 58.648 55.000 0.00 0.00 0.00 4.61
606 629 3.118592 GGTATGAGAGGAAGAGGTTGGTG 60.119 52.174 0.00 0.00 0.00 4.17
607 630 3.108376 GGTATGAGAGGAAGAGGTTGGT 58.892 50.000 0.00 0.00 0.00 3.67
608 631 2.101582 CGGTATGAGAGGAAGAGGTTGG 59.898 54.545 0.00 0.00 0.00 3.77
609 632 3.024547 TCGGTATGAGAGGAAGAGGTTG 58.975 50.000 0.00 0.00 0.00 3.77
610 633 3.025262 GTCGGTATGAGAGGAAGAGGTT 58.975 50.000 0.00 0.00 0.00 3.50
611 634 2.242708 AGTCGGTATGAGAGGAAGAGGT 59.757 50.000 0.00 0.00 0.00 3.85
612 635 2.882137 GAGTCGGTATGAGAGGAAGAGG 59.118 54.545 0.00 0.00 0.00 3.69
613 636 2.882137 GGAGTCGGTATGAGAGGAAGAG 59.118 54.545 0.00 0.00 0.00 2.85
614 637 2.745482 CGGAGTCGGTATGAGAGGAAGA 60.745 54.545 0.00 0.00 0.00 2.87
615 638 1.604755 CGGAGTCGGTATGAGAGGAAG 59.395 57.143 0.00 0.00 0.00 3.46
616 639 1.211212 TCGGAGTCGGTATGAGAGGAA 59.789 52.381 0.00 0.00 36.95 3.36
617 640 0.835276 TCGGAGTCGGTATGAGAGGA 59.165 55.000 0.00 0.00 36.95 3.71
618 641 1.231221 CTCGGAGTCGGTATGAGAGG 58.769 60.000 0.00 0.00 36.95 3.69
619 642 0.589223 GCTCGGAGTCGGTATGAGAG 59.411 60.000 6.90 0.00 36.95 3.20
620 643 0.818445 GGCTCGGAGTCGGTATGAGA 60.818 60.000 6.90 0.00 36.95 3.27
621 644 1.655329 GGCTCGGAGTCGGTATGAG 59.345 63.158 6.90 0.00 36.95 2.90
622 645 2.184830 CGGCTCGGAGTCGGTATGA 61.185 63.158 23.44 0.00 40.10 2.15
623 646 2.331805 CGGCTCGGAGTCGGTATG 59.668 66.667 23.44 0.00 40.10 2.39
629 652 3.423179 CCTCTACGGCTCGGAGTC 58.577 66.667 6.90 2.67 39.12 3.36
638 661 3.458163 TTGCGAGGGCCTCTACGG 61.458 66.667 29.81 16.08 38.85 4.02
639 662 2.202756 GTTGCGAGGGCCTCTACG 60.203 66.667 29.81 19.40 38.85 3.51
640 663 0.321298 TTTGTTGCGAGGGCCTCTAC 60.321 55.000 29.81 23.08 38.85 2.59
641 664 0.036388 CTTTGTTGCGAGGGCCTCTA 60.036 55.000 29.81 16.71 38.85 2.43
642 665 1.302832 CTTTGTTGCGAGGGCCTCT 60.303 57.895 29.81 0.00 38.85 3.69
643 666 2.335712 CCTTTGTTGCGAGGGCCTC 61.336 63.158 24.06 24.06 38.85 4.70
644 667 2.282462 CCTTTGTTGCGAGGGCCT 60.282 61.111 5.25 5.25 38.85 5.19
645 668 4.056125 GCCTTTGTTGCGAGGGCC 62.056 66.667 0.00 0.00 34.40 5.80
646 669 2.985847 AGCCTTTGTTGCGAGGGC 60.986 61.111 1.71 1.71 39.91 5.19
647 670 0.962356 ATCAGCCTTTGTTGCGAGGG 60.962 55.000 0.00 0.00 33.52 4.30
648 671 0.449388 GATCAGCCTTTGTTGCGAGG 59.551 55.000 0.00 0.00 36.09 4.63
649 672 1.396301 GAGATCAGCCTTTGTTGCGAG 59.604 52.381 0.00 0.00 0.00 5.03
650 673 1.002430 AGAGATCAGCCTTTGTTGCGA 59.998 47.619 0.00 0.00 0.00 5.10
651 674 1.129998 CAGAGATCAGCCTTTGTTGCG 59.870 52.381 0.00 0.00 0.00 4.85
652 675 1.135460 GCAGAGATCAGCCTTTGTTGC 60.135 52.381 0.00 0.00 0.00 4.17
653 676 2.434428 AGCAGAGATCAGCCTTTGTTG 58.566 47.619 0.00 0.00 0.00 3.33
654 677 2.875094 AGCAGAGATCAGCCTTTGTT 57.125 45.000 0.00 0.00 0.00 2.83
655 678 2.875094 AAGCAGAGATCAGCCTTTGT 57.125 45.000 0.00 0.00 0.00 2.83
656 679 2.422832 GGAAAGCAGAGATCAGCCTTTG 59.577 50.000 0.00 0.00 0.00 2.77
657 680 2.308275 AGGAAAGCAGAGATCAGCCTTT 59.692 45.455 0.00 0.00 0.00 3.11
658 681 1.914798 AGGAAAGCAGAGATCAGCCTT 59.085 47.619 0.00 0.00 0.00 4.35
659 682 1.209990 CAGGAAAGCAGAGATCAGCCT 59.790 52.381 0.00 0.00 0.00 4.58
660 683 1.666054 CAGGAAAGCAGAGATCAGCC 58.334 55.000 0.00 0.00 0.00 4.85
661 684 1.015868 GCAGGAAAGCAGAGATCAGC 58.984 55.000 0.00 0.00 0.00 4.26
662 685 2.678836 CAAGCAGGAAAGCAGAGATCAG 59.321 50.000 0.00 0.00 36.85 2.90
663 686 2.708051 CAAGCAGGAAAGCAGAGATCA 58.292 47.619 0.00 0.00 36.85 2.92
664 687 1.401199 GCAAGCAGGAAAGCAGAGATC 59.599 52.381 0.00 0.00 36.85 2.75
665 688 1.271762 TGCAAGCAGGAAAGCAGAGAT 60.272 47.619 0.00 0.00 36.85 2.75
666 689 0.109153 TGCAAGCAGGAAAGCAGAGA 59.891 50.000 0.00 0.00 36.85 3.10
667 690 0.956633 TTGCAAGCAGGAAAGCAGAG 59.043 50.000 0.00 0.00 38.35 3.35
668 691 0.956633 CTTGCAAGCAGGAAAGCAGA 59.043 50.000 14.65 0.00 38.35 4.26
669 692 3.491581 CTTGCAAGCAGGAAAGCAG 57.508 52.632 14.65 0.00 38.35 4.24
720 744 1.689582 GTGGTGGCTAGGGGTAGCT 60.690 63.158 4.50 0.00 42.45 3.32
739 763 4.899239 GCGAGGGGTGGAGCATCG 62.899 72.222 0.00 0.00 34.37 3.84
754 778 1.065418 AGTAGGGAAAGATTGGTGGCG 60.065 52.381 0.00 0.00 0.00 5.69
1454 1489 6.149474 GTGCATATACTCAAACACCTTGTCTT 59.851 38.462 0.00 0.00 36.34 3.01
1498 1533 0.322975 ATCTCCTTTGTCACGCAGCT 59.677 50.000 0.00 0.00 0.00 4.24
1748 1837 2.750301 CGTCATCAACGTCCTCGATA 57.250 50.000 0.00 0.00 46.42 2.92
2219 2325 4.022935 CCAGCAAAGACATCTAAGCAACAA 60.023 41.667 7.85 0.00 0.00 2.83
2283 2392 4.943705 ACAGGCATTATCAAACACGATCTT 59.056 37.500 0.00 0.00 0.00 2.40
2284 2393 4.517285 ACAGGCATTATCAAACACGATCT 58.483 39.130 0.00 0.00 0.00 2.75
4115 4379 4.219070 TCAGCTATGCTCAGCAACATTTTT 59.781 37.500 1.73 0.00 43.62 1.94
4116 4380 3.760151 TCAGCTATGCTCAGCAACATTTT 59.240 39.130 1.73 0.00 43.62 1.82
4117 4381 3.349927 TCAGCTATGCTCAGCAACATTT 58.650 40.909 1.73 0.00 43.62 2.32
4118 4382 2.995283 TCAGCTATGCTCAGCAACATT 58.005 42.857 1.73 0.00 43.62 2.71
4119 4383 2.704464 TCAGCTATGCTCAGCAACAT 57.296 45.000 1.73 0.00 43.62 2.71
4120 4384 2.285977 CATCAGCTATGCTCAGCAACA 58.714 47.619 1.73 0.00 43.62 3.33
4130 4394 5.503662 TTGGTATTGTTGCATCAGCTATG 57.496 39.130 0.00 0.00 42.74 2.23
4131 4395 4.581824 CCTTGGTATTGTTGCATCAGCTAT 59.418 41.667 0.00 0.00 42.74 2.97
4132 4396 3.947196 CCTTGGTATTGTTGCATCAGCTA 59.053 43.478 0.00 0.00 42.74 3.32
4133 4397 2.756760 CCTTGGTATTGTTGCATCAGCT 59.243 45.455 0.00 0.00 42.74 4.24
4134 4398 2.754552 TCCTTGGTATTGTTGCATCAGC 59.245 45.455 0.00 0.00 42.57 4.26
4135 4399 5.105635 ACATTCCTTGGTATTGTTGCATCAG 60.106 40.000 0.00 0.00 0.00 2.90
4136 4400 4.771577 ACATTCCTTGGTATTGTTGCATCA 59.228 37.500 0.00 0.00 0.00 3.07
4137 4401 5.329035 ACATTCCTTGGTATTGTTGCATC 57.671 39.130 0.00 0.00 0.00 3.91
4138 4402 5.743636 AACATTCCTTGGTATTGTTGCAT 57.256 34.783 0.00 0.00 0.00 3.96
4139 4403 5.543507 AAACATTCCTTGGTATTGTTGCA 57.456 34.783 0.00 0.00 31.34 4.08
4140 4404 6.223120 AGAAAACATTCCTTGGTATTGTTGC 58.777 36.000 0.00 0.00 31.34 4.17
4141 4405 9.573133 GATAGAAAACATTCCTTGGTATTGTTG 57.427 33.333 0.00 0.00 31.34 3.33
4142 4406 9.533831 AGATAGAAAACATTCCTTGGTATTGTT 57.466 29.630 0.00 0.00 32.19 2.83
4143 4407 9.533831 AAGATAGAAAACATTCCTTGGTATTGT 57.466 29.630 0.00 0.00 0.00 2.71
4186 4450 8.953313 CCTACCTATACGTTTGAAATTCCTTTT 58.047 33.333 0.00 0.00 0.00 2.27
4187 4451 8.323567 TCCTACCTATACGTTTGAAATTCCTTT 58.676 33.333 0.00 0.00 0.00 3.11
4188 4452 7.767659 GTCCTACCTATACGTTTGAAATTCCTT 59.232 37.037 0.00 0.00 0.00 3.36
4189 4453 7.093201 TGTCCTACCTATACGTTTGAAATTCCT 60.093 37.037 0.00 0.00 0.00 3.36
4199 4463 5.012239 TGAAGTGTGTCCTACCTATACGTT 58.988 41.667 0.00 0.00 0.00 3.99
4201 4465 5.571784 TTGAAGTGTGTCCTACCTATACG 57.428 43.478 0.00 0.00 0.00 3.06
4211 4475 7.214467 TCCATTTAAAGATTGAAGTGTGTCC 57.786 36.000 0.00 0.00 0.00 4.02
4293 4557 9.944376 TGCATAGTTTGTATCTTCTTTCTAACT 57.056 29.630 0.00 0.00 32.76 2.24
4295 4559 9.944376 ACTGCATAGTTTGTATCTTCTTTCTAA 57.056 29.630 0.00 0.00 31.66 2.10
4297 4561 9.944376 TTACTGCATAGTTTGTATCTTCTTTCT 57.056 29.630 0.00 0.00 38.36 2.52
4300 4564 9.502091 TGTTTACTGCATAGTTTGTATCTTCTT 57.498 29.630 0.00 0.00 38.36 2.52
4301 4565 9.502091 TTGTTTACTGCATAGTTTGTATCTTCT 57.498 29.630 0.00 0.00 38.36 2.85
4304 4568 8.730680 CCTTTGTTTACTGCATAGTTTGTATCT 58.269 33.333 0.00 0.00 38.36 1.98
4305 4569 8.512138 ACCTTTGTTTACTGCATAGTTTGTATC 58.488 33.333 0.00 0.00 38.36 2.24
4306 4570 8.404107 ACCTTTGTTTACTGCATAGTTTGTAT 57.596 30.769 0.00 0.00 38.36 2.29
4307 4571 7.499563 TGACCTTTGTTTACTGCATAGTTTGTA 59.500 33.333 0.00 0.00 38.36 2.41
4308 4572 6.320164 TGACCTTTGTTTACTGCATAGTTTGT 59.680 34.615 0.00 0.00 38.36 2.83
4309 4573 6.734137 TGACCTTTGTTTACTGCATAGTTTG 58.266 36.000 0.00 0.00 38.36 2.93
4310 4574 6.952773 TGACCTTTGTTTACTGCATAGTTT 57.047 33.333 0.00 0.00 38.36 2.66
4311 4575 6.714810 TGATGACCTTTGTTTACTGCATAGTT 59.285 34.615 0.00 0.00 38.36 2.24
4312 4576 6.237901 TGATGACCTTTGTTTACTGCATAGT 58.762 36.000 0.00 0.00 40.99 2.12
4313 4577 6.741992 TGATGACCTTTGTTTACTGCATAG 57.258 37.500 0.00 0.00 0.00 2.23
4314 4578 7.282224 GGTATGATGACCTTTGTTTACTGCATA 59.718 37.037 0.00 0.00 36.47 3.14
4315 4579 6.095440 GGTATGATGACCTTTGTTTACTGCAT 59.905 38.462 0.00 0.00 36.47 3.96
4316 4580 5.414454 GGTATGATGACCTTTGTTTACTGCA 59.586 40.000 0.00 0.00 36.47 4.41
4317 4581 5.414454 TGGTATGATGACCTTTGTTTACTGC 59.586 40.000 0.00 0.00 40.46 4.40
4318 4582 7.447374 TTGGTATGATGACCTTTGTTTACTG 57.553 36.000 0.00 0.00 40.46 2.74
4319 4583 7.942341 TCTTTGGTATGATGACCTTTGTTTACT 59.058 33.333 0.00 0.00 40.46 2.24
4320 4584 8.106247 TCTTTGGTATGATGACCTTTGTTTAC 57.894 34.615 0.00 0.00 40.46 2.01
4321 4585 8.877864 ATCTTTGGTATGATGACCTTTGTTTA 57.122 30.769 0.00 0.00 40.46 2.01
4322 4586 7.781324 ATCTTTGGTATGATGACCTTTGTTT 57.219 32.000 0.00 0.00 40.46 2.83
4323 4587 8.906867 CATATCTTTGGTATGATGACCTTTGTT 58.093 33.333 0.00 0.00 40.46 2.83
4324 4588 8.455903 CATATCTTTGGTATGATGACCTTTGT 57.544 34.615 0.00 0.00 40.46 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.