Multiple sequence alignment - TraesCS4A01G293100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G293100 chr4A 100.000 4051 0 0 1 4051 595377903 595373853 0.000000e+00 7481.0
1 TraesCS4A01G293100 chr4A 99.683 315 1 0 3112 3426 595374484 595374170 9.760000e-161 577.0
2 TraesCS4A01G293100 chr4A 99.683 315 1 0 3420 3734 595374792 595374478 9.760000e-161 577.0
3 TraesCS4A01G293100 chr4A 100.000 31 0 0 3557 3587 595374259 595374229 1.570000e-04 58.4
4 TraesCS4A01G293100 chr4A 100.000 31 0 0 3249 3279 595374259 595374229 1.570000e-04 58.4
5 TraesCS4A01G293100 chr4A 100.000 31 0 0 3645 3675 595374347 595374317 1.570000e-04 58.4
6 TraesCS4A01G293100 chr4A 100.000 31 0 0 3337 3367 595374347 595374317 1.570000e-04 58.4
7 TraesCS4A01G293100 chr4A 100.000 31 0 0 3557 3587 595374567 595374537 1.570000e-04 58.4
8 TraesCS4A01G293100 chr4A 100.000 31 0 0 3249 3279 595374567 595374537 1.570000e-04 58.4
9 TraesCS4A01G293100 chr4A 100.000 31 0 0 3645 3675 595374655 595374625 1.570000e-04 58.4
10 TraesCS4A01G293100 chr4A 100.000 31 0 0 3337 3367 595374655 595374625 1.570000e-04 58.4
11 TraesCS4A01G293100 chr4D 92.541 1877 91 23 1391 3244 7902440 7904290 0.000000e+00 2645.0
12 TraesCS4A01G293100 chr4D 82.452 775 88 28 3 749 550130 549376 5.710000e-178 634.0
13 TraesCS4A01G293100 chr4D 88.995 418 23 7 862 1272 7901853 7902254 2.810000e-136 496.0
14 TraesCS4A01G293100 chr4D 83.071 254 22 10 3718 3962 7904966 7905207 1.140000e-50 211.0
15 TraesCS4A01G293100 chr4D 89.552 134 12 2 3420 3552 7904158 7904290 6.960000e-38 169.0
16 TraesCS4A01G293100 chr4D 92.500 80 6 0 3249 3328 7904504 7904583 9.200000e-22 115.0
17 TraesCS4A01G293100 chr4D 92.500 80 6 0 3557 3636 7904504 7904583 9.200000e-22 115.0
18 TraesCS4A01G293100 chr4D 97.561 41 1 0 3328 3368 7904495 7904535 2.020000e-08 71.3
19 TraesCS4A01G293100 chr4D 97.561 41 1 0 3636 3676 7904495 7904535 2.020000e-08 71.3
20 TraesCS4A01G293100 chr4D 100.000 35 0 0 3334 3368 7904935 7904969 9.400000e-07 65.8
21 TraesCS4A01G293100 chr4D 100.000 35 0 0 3642 3676 7904935 7904969 9.400000e-07 65.8
22 TraesCS4A01G293100 chr4D 100.000 31 0 0 3249 3279 7904938 7904968 1.570000e-04 58.4
23 TraesCS4A01G293100 chr4D 100.000 31 0 0 3557 3587 7904938 7904968 1.570000e-04 58.4
24 TraesCS4A01G293100 chr4B 89.693 1106 64 20 2159 3236 14341789 14342872 0.000000e+00 1365.0
25 TraesCS4A01G293100 chr4B 85.542 996 58 35 727 1680 14340189 14341140 0.000000e+00 963.0
26 TraesCS4A01G293100 chr4B 86.792 212 25 2 3700 3908 14343196 14343407 2.430000e-57 233.0
27 TraesCS4A01G293100 chr4B 91.200 125 9 2 3420 3544 14342750 14342872 6.960000e-38 169.0
28 TraesCS4A01G293100 chr4B 95.556 45 2 0 3249 3293 14343096 14343140 5.620000e-09 73.1
29 TraesCS4A01G293100 chr4B 95.556 45 2 0 3557 3601 14343096 14343140 5.620000e-09 73.1
30 TraesCS4A01G293100 chr4B 97.561 41 1 0 3328 3368 14343087 14343127 2.020000e-08 71.3
31 TraesCS4A01G293100 chr4B 97.561 41 1 0 3636 3676 14343087 14343127 2.020000e-08 71.3
32 TraesCS4A01G293100 chr7B 84.204 766 97 22 4 749 234915665 234914904 0.000000e+00 723.0
33 TraesCS4A01G293100 chr7B 90.732 410 15 10 2832 3223 682800192 682799788 3.590000e-145 525.0
34 TraesCS4A01G293100 chr7B 90.220 409 18 11 2833 3223 706366733 706366329 7.760000e-142 514.0
35 TraesCS4A01G293100 chr7B 89.928 417 17 12 2822 3219 706372959 706372549 7.760000e-142 514.0
36 TraesCS4A01G293100 chr7B 89.500 400 20 9 2833 3214 499385480 499385875 1.690000e-133 486.0
37 TraesCS4A01G293100 chr7B 87.826 115 5 5 3425 3531 682799901 682799788 4.250000e-25 126.0
38 TraesCS4A01G293100 chr7B 87.069 116 6 5 3420 3527 706372663 706372549 5.500000e-24 122.0
39 TraesCS4A01G293100 chr7B 93.846 65 4 0 3987 4051 1358650 1358714 9.270000e-17 99.0
40 TraesCS4A01G293100 chr3A 83.097 775 96 22 3 749 662617006 662617773 0.000000e+00 673.0
41 TraesCS4A01G293100 chr3A 82.500 760 100 25 3 749 510305018 510305757 1.590000e-178 636.0
42 TraesCS4A01G293100 chr2B 83.097 775 94 24 3 748 51080225 51079459 0.000000e+00 671.0
43 TraesCS4A01G293100 chr2B 85.663 558 71 9 3 554 518771630 518772184 2.710000e-161 579.0
44 TraesCS4A01G293100 chr2B 89.731 409 20 8 2833 3223 91294645 91295049 1.680000e-138 503.0
45 TraesCS4A01G293100 chr2B 87.500 120 6 5 3420 3531 91294931 91295049 3.290000e-26 130.0
46 TraesCS4A01G293100 chr2A 82.968 775 96 24 3 749 644223045 644222279 0.000000e+00 667.0
47 TraesCS4A01G293100 chr3B 85.423 638 79 11 6 637 457569749 457569120 0.000000e+00 651.0
48 TraesCS4A01G293100 chr3B 90.709 409 16 10 2833 3223 805916375 805915971 3.590000e-145 525.0
49 TraesCS4A01G293100 chr3B 89.891 366 15 9 2876 3223 49346230 49345869 6.170000e-123 451.0
50 TraesCS4A01G293100 chr3B 89.071 366 18 11 2876 3223 737253007 737253368 6.220000e-118 435.0
51 TraesCS4A01G293100 chr3B 87.500 120 6 4 3420 3531 805916089 805915971 3.290000e-26 130.0
52 TraesCS4A01G293100 chr3B 87.826 115 5 5 3425 3531 737253255 737253368 4.250000e-25 126.0
53 TraesCS4A01G293100 chr5B 82.219 658 81 22 127 756 532767371 532768020 5.960000e-148 534.0
54 TraesCS4A01G293100 chr5B 89.344 366 17 10 2876 3223 37720481 37720120 1.340000e-119 440.0
55 TraesCS4A01G293100 chr5B 97.647 85 0 2 3733 3817 5102032 5102114 1.170000e-30 145.0
56 TraesCS4A01G293100 chr5B 94.624 93 4 1 3734 3825 862907 862815 4.220000e-30 143.0
57 TraesCS4A01G293100 chr5B 88.696 115 4 4 3425 3531 37720233 37720120 9.140000e-27 132.0
58 TraesCS4A01G293100 chr5D 96.667 90 1 2 3733 3821 544865456 544865368 9.070000e-32 148.0
59 TraesCS4A01G293100 chr5D 97.674 86 0 2 3733 3818 6822757 6822674 3.260000e-31 147.0
60 TraesCS4A01G293100 chr5D 97.619 84 2 0 3734 3817 3810211 3810128 1.170000e-30 145.0
61 TraesCS4A01G293100 chr5D 97.619 84 2 0 3734 3817 13909884 13909801 1.170000e-30 145.0
62 TraesCS4A01G293100 chr6D 97.647 85 1 1 3735 3818 456096949 456096865 1.170000e-30 145.0
63 TraesCS4A01G293100 chr2D 93.750 64 4 0 3987 4050 576279074 576279011 3.330000e-16 97.1
64 TraesCS4A01G293100 chr1B 98.077 52 0 1 2832 2883 171844119 171844169 5.580000e-14 89.8
65 TraesCS4A01G293100 chr5A 86.885 61 4 4 643 700 626190445 626190386 9.400000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G293100 chr4A 595373853 595377903 4050 True 827.472727 7481 99.942364 1 4051 11 chr4A.!!$R1 4050
1 TraesCS4A01G293100 chr4D 549376 550130 754 True 634.000000 634 82.452000 3 749 1 chr4D.!!$R1 746
2 TraesCS4A01G293100 chr4D 7901853 7905207 3354 False 345.166667 2645 94.523417 862 3962 12 chr4D.!!$F1 3100
3 TraesCS4A01G293100 chr4B 14340189 14343407 3218 False 377.350000 1365 92.432625 727 3908 8 chr4B.!!$F1 3181
4 TraesCS4A01G293100 chr7B 234914904 234915665 761 True 723.000000 723 84.204000 4 749 1 chr7B.!!$R1 745
5 TraesCS4A01G293100 chr3A 662617006 662617773 767 False 673.000000 673 83.097000 3 749 1 chr3A.!!$F2 746
6 TraesCS4A01G293100 chr3A 510305018 510305757 739 False 636.000000 636 82.500000 3 749 1 chr3A.!!$F1 746
7 TraesCS4A01G293100 chr2B 51079459 51080225 766 True 671.000000 671 83.097000 3 748 1 chr2B.!!$R1 745
8 TraesCS4A01G293100 chr2B 518771630 518772184 554 False 579.000000 579 85.663000 3 554 1 chr2B.!!$F1 551
9 TraesCS4A01G293100 chr2A 644222279 644223045 766 True 667.000000 667 82.968000 3 749 1 chr2A.!!$R1 746
10 TraesCS4A01G293100 chr3B 457569120 457569749 629 True 651.000000 651 85.423000 6 637 1 chr3B.!!$R2 631
11 TraesCS4A01G293100 chr5B 532767371 532768020 649 False 534.000000 534 82.219000 127 756 1 chr5B.!!$F2 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 765 0.106868 TCGAGCCCCATCTTCGACTA 60.107 55.0 0.00 0.0 0.00 2.59 F
1656 1793 0.462789 CAAGATCTTTGCCATGGCCC 59.537 55.0 33.44 14.9 41.09 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1689 1995 0.648441 GTGCAATTGCGGCATTCATG 59.352 50.000 24.58 2.02 44.11 3.07 R
3434 4029 1.133823 TGTGAAAGCACCACATCCAGT 60.134 47.619 0.00 0.00 44.51 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 38 0.889186 TTCTCCTTGGAGGCGTTTGC 60.889 55.000 15.81 0.00 41.71 3.68
56 58 2.607750 GGTCAGCCTCCCTCCACA 60.608 66.667 0.00 0.00 0.00 4.17
76 78 0.399091 CACCATCCTCTAGCCTCCCA 60.399 60.000 0.00 0.00 0.00 4.37
142 145 2.548920 CGTTCTCCTTCTTGAAGGTGCT 60.549 50.000 23.78 0.00 40.81 4.40
172 175 1.237285 GCTGTTTGGATGGTGAGCGT 61.237 55.000 0.00 0.00 0.00 5.07
173 176 0.798776 CTGTTTGGATGGTGAGCGTC 59.201 55.000 0.00 0.00 0.00 5.19
177 180 0.250124 TTGGATGGTGAGCGTCGTTT 60.250 50.000 0.00 0.00 0.00 3.60
199 203 4.258932 CGTTTGGCGGCGGTTGTT 62.259 61.111 9.78 0.00 36.85 2.83
200 204 2.894565 CGTTTGGCGGCGGTTGTTA 61.895 57.895 9.78 0.00 36.85 2.41
248 253 1.991339 TATCCCTCCTCTGCGACCGA 61.991 60.000 0.00 0.00 0.00 4.69
272 277 2.238521 GTGGGCAATTCTGTTTGAGGA 58.761 47.619 0.00 0.00 0.00 3.71
275 280 3.708631 TGGGCAATTCTGTTTGAGGAAAA 59.291 39.130 0.00 0.00 0.00 2.29
309 314 2.105128 GGAGTGCGTGGATCCTCG 59.895 66.667 27.64 27.64 36.23 4.63
325 330 0.107456 CTCGCTATGTGGCCATCCTT 59.893 55.000 9.72 0.00 32.29 3.36
342 347 0.721718 CTTCGACGGCAACCATTCTC 59.278 55.000 0.00 0.00 0.00 2.87
359 364 5.163447 CCATTCTCGTTCTAGGTGGAACATA 60.163 44.000 6.97 0.00 44.52 2.29
391 396 4.570663 GTGCGGCGCCTATCGAGT 62.571 66.667 30.82 0.00 41.67 4.18
446 452 4.101790 GGATGGTTGTGCCGTGCG 62.102 66.667 0.00 0.00 41.21 5.34
570 581 1.269257 GCCTTGTTGTCTTCAGTTGCC 60.269 52.381 0.00 0.00 0.00 4.52
571 582 1.338020 CCTTGTTGTCTTCAGTTGCCC 59.662 52.381 0.00 0.00 0.00 5.36
605 618 8.363390 TGATCTATCCTTCTAACTTGTAGCATG 58.637 37.037 0.00 0.00 0.00 4.06
613 626 2.393271 ACTTGTAGCATGTGAGGCTC 57.607 50.000 7.79 7.79 42.62 4.70
637 672 3.016474 GCTGCTCGCCAACGTCTTC 62.016 63.158 0.00 0.00 41.18 2.87
652 689 3.877508 ACGTCTTCCTTTCTTTGGTTCTG 59.122 43.478 0.00 0.00 0.00 3.02
657 694 2.687935 TCCTTTCTTTGGTTCTGTGTGC 59.312 45.455 0.00 0.00 0.00 4.57
666 703 4.882842 TGGTTCTGTGTGCTCTGTAATA 57.117 40.909 0.00 0.00 0.00 0.98
670 707 5.470368 GTTCTGTGTGCTCTGTAATACTGA 58.530 41.667 0.24 0.24 0.00 3.41
686 723 1.349688 ACTGACCGGTTGATGGCTTTA 59.650 47.619 9.42 0.00 0.00 1.85
693 730 6.153680 TGACCGGTTGATGGCTTTATTAATTT 59.846 34.615 9.42 0.00 0.00 1.82
697 734 9.372369 CCGGTTGATGGCTTTATTAATTTAAAA 57.628 29.630 0.00 0.00 0.00 1.52
704 741 8.956533 TGGCTTTATTAATTTAAAATCAGGCC 57.043 30.769 0.00 0.00 0.00 5.19
728 765 0.106868 TCGAGCCCCATCTTCGACTA 60.107 55.000 0.00 0.00 0.00 2.59
749 786 7.273815 CGACTAGGTTGATGTCTTTTCTCTAAC 59.726 40.741 0.00 0.00 0.00 2.34
751 788 8.091449 ACTAGGTTGATGTCTTTTCTCTAACAG 58.909 37.037 0.00 0.00 0.00 3.16
770 807 5.731957 ACAGAAAGGAGGAAGAAGACTAC 57.268 43.478 0.00 0.00 0.00 2.73
776 813 6.882768 AAGGAGGAAGAAGACTACAATGAT 57.117 37.500 0.00 0.00 0.00 2.45
782 819 7.331791 AGGAAGAAGACTACAATGATAACCAC 58.668 38.462 0.00 0.00 0.00 4.16
783 820 7.181125 AGGAAGAAGACTACAATGATAACCACT 59.819 37.037 0.00 0.00 0.00 4.00
784 821 7.492994 GGAAGAAGACTACAATGATAACCACTC 59.507 40.741 0.00 0.00 0.00 3.51
792 829 8.924303 ACTACAATGATAACCACTCTATGCTTA 58.076 33.333 0.00 0.00 0.00 3.09
797 834 9.726438 AATGATAACCACTCTATGCTTATAACC 57.274 33.333 0.00 0.00 0.00 2.85
799 836 8.710239 TGATAACCACTCTATGCTTATAACCAA 58.290 33.333 0.00 0.00 0.00 3.67
820 857 6.873605 ACCAACAGTTTTTCTTTTCTTTCTGG 59.126 34.615 0.00 0.00 0.00 3.86
849 889 8.682936 ATGAACCTCAGATTATAAACATGTCC 57.317 34.615 0.00 0.00 0.00 4.02
852 892 9.125026 GAACCTCAGATTATAAACATGTCCAAT 57.875 33.333 0.00 0.00 0.00 3.16
865 905 7.664552 AACATGTCCAATGATCCATATTTGT 57.335 32.000 0.00 0.00 0.00 2.83
866 906 7.046292 ACATGTCCAATGATCCATATTTGTG 57.954 36.000 0.00 0.00 0.00 3.33
867 907 6.041182 ACATGTCCAATGATCCATATTTGTGG 59.959 38.462 0.00 0.00 40.76 4.17
869 909 3.896888 TCCAATGATCCATATTTGTGGCC 59.103 43.478 0.00 0.00 39.19 5.36
870 910 3.642377 CCAATGATCCATATTTGTGGCCA 59.358 43.478 0.00 0.00 39.19 5.36
872 912 3.668141 TGATCCATATTTGTGGCCACT 57.332 42.857 34.75 18.85 39.19 4.00
873 913 4.787135 TGATCCATATTTGTGGCCACTA 57.213 40.909 34.75 26.28 39.19 2.74
916 974 2.481471 GCGCCTAGCCCCAAATGAC 61.481 63.158 0.00 0.00 40.81 3.06
1072 1137 3.508845 TTTCTCCCCTCTTGTTCCAAG 57.491 47.619 0.00 0.00 0.00 3.61
1316 1382 2.285024 CCCCCGTCTAACCCGTTCA 61.285 63.158 0.00 0.00 0.00 3.18
1320 1396 1.667151 CGTCTAACCCGTTCACCCA 59.333 57.895 0.00 0.00 0.00 4.51
1375 1451 6.435591 TGACTAGTATATGCTCAGATCTTGGG 59.564 42.308 0.00 0.00 0.00 4.12
1376 1452 5.719085 ACTAGTATATGCTCAGATCTTGGGG 59.281 44.000 0.00 0.00 0.00 4.96
1379 1455 1.890552 ATGCTCAGATCTTGGGGTCT 58.109 50.000 0.00 0.00 0.00 3.85
1381 1457 0.467804 GCTCAGATCTTGGGGTCTCC 59.532 60.000 0.00 0.00 0.00 3.71
1442 1577 4.201950 GCATGCCTAGTTGATTAAGGTGTG 60.202 45.833 6.36 0.00 32.67 3.82
1523 1658 2.160219 TCAGCTGTGAAATCGATGTTGC 59.840 45.455 14.67 0.00 0.00 4.17
1656 1793 0.462789 CAAGATCTTTGCCATGGCCC 59.537 55.000 33.44 14.90 41.09 5.80
1676 1813 4.820173 GCCCTTTTAAGTCAGTGTTAGTGT 59.180 41.667 0.00 0.00 0.00 3.55
1701 2007 1.543607 TTTTCCTCATGAATGCCGCA 58.456 45.000 0.00 0.00 31.67 5.69
1784 2091 5.412594 GCATGTGTACTCCAATTTCTGAAGA 59.587 40.000 0.00 0.00 0.00 2.87
1805 2112 7.439955 TGAAGAGTCGTGCTTTACTAATTTTCA 59.560 33.333 0.00 0.00 0.00 2.69
1806 2113 7.118422 AGAGTCGTGCTTTACTAATTTTCAC 57.882 36.000 0.00 0.00 0.00 3.18
1936 2243 7.992608 TGCATTTACTCTTCCTTCATAAGCATA 59.007 33.333 0.00 0.00 0.00 3.14
1962 2269 5.783111 ACCAAGTACAAAATGAAGGATTGC 58.217 37.500 0.00 0.00 0.00 3.56
1969 2276 4.083110 ACAAAATGAAGGATTGCGTCTCTG 60.083 41.667 0.00 0.00 0.00 3.35
2128 2572 2.726681 GCGGTTGTTATGGCAAACTACG 60.727 50.000 14.94 14.15 36.40 3.51
2143 2587 3.402628 ACTACGTGCTTGATGTTTCCT 57.597 42.857 0.00 0.00 0.00 3.36
2144 2588 3.067106 ACTACGTGCTTGATGTTTCCTG 58.933 45.455 0.00 0.00 0.00 3.86
2145 2589 2.254546 ACGTGCTTGATGTTTCCTGA 57.745 45.000 0.00 0.00 0.00 3.86
2155 2599 7.092716 GCTTGATGTTTCCTGAATGTAAATGT 58.907 34.615 0.00 0.00 0.00 2.71
2171 2615 7.585286 TGTAAATGTTGTACCTATGTTCGTC 57.415 36.000 0.00 0.00 0.00 4.20
2210 2654 7.721402 TCAGAAGAGTTTCATATCTCTTAGGC 58.279 38.462 7.30 0.00 46.65 3.93
2231 2677 4.142469 GGCGATTGTTATGGCAAACTACTT 60.142 41.667 11.78 0.00 37.24 2.24
2233 2679 5.391523 GCGATTGTTATGGCAAACTACTTGA 60.392 40.000 11.78 0.00 37.17 3.02
2290 2740 6.595716 AGCTGACCAGTTTATCTTGTTATGAC 59.404 38.462 0.00 0.00 0.00 3.06
2306 2756 0.673333 TGACGAGTTTCATGCCGCAT 60.673 50.000 0.00 0.00 0.00 4.73
2317 2768 4.812814 GCCGCATTAAAAGGCTGG 57.187 55.556 10.73 2.51 46.83 4.85
2318 2769 1.890174 GCCGCATTAAAAGGCTGGT 59.110 52.632 10.73 0.00 46.83 4.00
2328 2779 6.975197 GCATTAAAAGGCTGGTAATTCTCTTC 59.025 38.462 0.00 0.00 32.08 2.87
2397 2852 6.915544 TTGATCTGAAATGATTTCCTCTCG 57.084 37.500 14.73 0.02 38.90 4.04
2404 2859 5.582269 TGAAATGATTTCCTCTCGCTGTTAG 59.418 40.000 14.73 0.00 38.90 2.34
2405 2860 4.744795 ATGATTTCCTCTCGCTGTTAGT 57.255 40.909 0.00 0.00 0.00 2.24
2484 2939 3.807631 AACTTCTGCAGGCGCGACA 62.808 57.895 17.71 2.65 42.97 4.35
2519 2974 3.518552 ATGGGGCTTGCTGTGCTGT 62.519 57.895 0.00 0.00 0.00 4.40
2597 3052 0.752658 TCATCATCTCCGTCGGCATT 59.247 50.000 6.34 0.00 0.00 3.56
2603 3058 0.456221 TCTCCGTCGGCATTCTTCTC 59.544 55.000 6.34 0.00 0.00 2.87
2730 3186 2.164338 GTTCCCCTGATTTTGCGGTTA 58.836 47.619 0.00 0.00 0.00 2.85
2918 3378 0.101040 GCTTGTGTGTTTCTGCTGCA 59.899 50.000 0.88 0.88 0.00 4.41
2938 3398 4.949856 TGCAGTTTGTTTTCCTCTTCTTCT 59.050 37.500 0.00 0.00 0.00 2.85
2940 3400 5.974158 GCAGTTTGTTTTCCTCTTCTTCTTC 59.026 40.000 0.00 0.00 0.00 2.87
2980 3440 1.630369 TGCAGCCTGACAAGGTATCTT 59.370 47.619 0.00 0.00 46.43 2.40
3094 3554 1.214062 GGCCACTCTCAGTCAGTCG 59.786 63.158 0.00 0.00 0.00 4.18
3098 3558 0.523966 CACTCTCAGTCAGTCGGTCC 59.476 60.000 0.00 0.00 0.00 4.46
3099 3559 0.110678 ACTCTCAGTCAGTCGGTCCA 59.889 55.000 0.00 0.00 0.00 4.02
3100 3560 0.808125 CTCTCAGTCAGTCGGTCCAG 59.192 60.000 0.00 0.00 0.00 3.86
3120 3590 2.372172 AGTTGGTTCCTGGATCGAAGTT 59.628 45.455 0.00 0.00 0.00 2.66
3144 3614 1.608055 CACTGGATGTGGTGCTTTCA 58.392 50.000 0.00 0.00 42.68 2.69
3151 3621 3.119708 GGATGTGGTGCTTTCACAGAATC 60.120 47.826 11.55 6.08 46.49 2.52
3152 3622 2.929641 TGTGGTGCTTTCACAGAATCA 58.070 42.857 3.85 0.00 44.87 2.57
3154 3624 3.253921 TGTGGTGCTTTCACAGAATCATG 59.746 43.478 3.85 0.00 44.87 3.07
3201 3671 3.937706 CTGTAGTGCTCCTGAAATTCCTG 59.062 47.826 0.00 0.00 0.00 3.86
3245 3715 4.645863 ACATATGCTGCTTGATATGGGA 57.354 40.909 17.52 0.00 37.01 4.37
3246 3716 5.188988 ACATATGCTGCTTGATATGGGAT 57.811 39.130 17.52 1.07 37.01 3.85
3247 3717 5.191426 ACATATGCTGCTTGATATGGGATC 58.809 41.667 17.52 0.00 37.01 3.36
3249 3719 3.136009 TGCTGCTTGATATGGGATCTG 57.864 47.619 0.00 0.00 0.00 2.90
3251 3721 2.434428 CTGCTTGATATGGGATCTGGC 58.566 52.381 0.00 0.00 0.00 4.85
3252 3722 1.776063 TGCTTGATATGGGATCTGGCA 59.224 47.619 0.00 0.00 0.00 4.92
3253 3723 2.175284 TGCTTGATATGGGATCTGGCAA 59.825 45.455 0.00 0.00 0.00 4.52
3260 3780 6.554784 TGATATGGGATCTGGCAATTATGTT 58.445 36.000 0.00 0.00 0.00 2.71
3267 3787 6.002704 GGATCTGGCAATTATGTTCAGAGAT 58.997 40.000 0.00 0.00 39.99 2.75
3268 3788 6.072618 GGATCTGGCAATTATGTTCAGAGATG 60.073 42.308 0.00 0.00 39.99 2.90
3269 3789 4.577693 TCTGGCAATTATGTTCAGAGATGC 59.422 41.667 0.00 0.00 35.56 3.91
3270 3790 4.271661 TGGCAATTATGTTCAGAGATGCA 58.728 39.130 0.00 0.00 34.37 3.96
3272 3792 5.185442 TGGCAATTATGTTCAGAGATGCAAA 59.815 36.000 0.00 0.00 34.37 3.68
3273 3793 6.101332 GGCAATTATGTTCAGAGATGCAAAA 58.899 36.000 0.00 0.00 34.37 2.44
3274 3794 6.255020 GGCAATTATGTTCAGAGATGCAAAAG 59.745 38.462 0.00 0.00 34.37 2.27
3275 3795 7.031372 GCAATTATGTTCAGAGATGCAAAAGA 58.969 34.615 0.00 0.00 33.00 2.52
3279 3803 8.801715 TTATGTTCAGAGATGCAAAAGAAAAC 57.198 30.769 0.00 0.00 0.00 2.43
3281 3805 6.629128 TGTTCAGAGATGCAAAAGAAAACAA 58.371 32.000 0.00 0.00 0.00 2.83
3283 3807 7.765360 TGTTCAGAGATGCAAAAGAAAACAATT 59.235 29.630 0.00 0.00 0.00 2.32
3284 3808 7.935338 TCAGAGATGCAAAAGAAAACAATTC 57.065 32.000 0.00 0.00 0.00 2.17
3287 3811 7.650504 CAGAGATGCAAAAGAAAACAATTCAGA 59.349 33.333 0.00 0.00 0.00 3.27
3288 3812 8.365647 AGAGATGCAAAAGAAAACAATTCAGAT 58.634 29.630 0.00 0.00 0.00 2.90
3290 3814 6.289745 TGCAAAAGAAAACAATTCAGATGC 57.710 33.333 0.00 0.00 0.00 3.91
3293 3817 6.630045 GCAAAAGAAAACAATTCAGATGCAAC 59.370 34.615 0.00 0.00 0.00 4.17
3295 3819 8.392612 CAAAAGAAAACAATTCAGATGCAACTT 58.607 29.630 0.00 0.00 0.00 2.66
3298 3822 9.768662 AAGAAAACAATTCAGATGCAACTTATT 57.231 25.926 0.00 0.00 0.00 1.40
3312 3836 5.712152 CAACTTATTTGCAAGTCCTTCCT 57.288 39.130 0.00 0.00 37.78 3.36
3314 3839 6.846350 CAACTTATTTGCAAGTCCTTCCTAG 58.154 40.000 0.00 0.00 37.78 3.02
3316 3841 2.949177 TTTGCAAGTCCTTCCTAGCA 57.051 45.000 0.00 0.00 0.00 3.49
3318 3843 2.949177 TGCAAGTCCTTCCTAGCAAA 57.051 45.000 0.00 0.00 0.00 3.68
3319 3844 2.783135 TGCAAGTCCTTCCTAGCAAAG 58.217 47.619 0.00 0.00 0.00 2.77
3320 3845 2.371841 TGCAAGTCCTTCCTAGCAAAGA 59.628 45.455 5.03 0.00 0.00 2.52
3322 3847 3.821033 GCAAGTCCTTCCTAGCAAAGAAA 59.179 43.478 5.03 0.00 0.00 2.52
3323 3848 4.320567 GCAAGTCCTTCCTAGCAAAGAAAC 60.321 45.833 5.03 3.79 0.00 2.78
3326 3851 5.066593 AGTCCTTCCTAGCAAAGAAACTTG 58.933 41.667 5.03 0.00 0.00 3.16
3331 3926 4.985538 TCCTAGCAAAGAAACTTGATGGT 58.014 39.130 0.00 0.00 0.00 3.55
3368 3963 9.985730 TTATGTTCAGAGATGCAAAAGAAAATT 57.014 25.926 0.00 0.00 0.00 1.82
3369 3964 8.897872 ATGTTCAGAGATGCAAAAGAAAATTT 57.102 26.923 0.00 0.00 0.00 1.82
3370 3965 8.721019 TGTTCAGAGATGCAAAAGAAAATTTT 57.279 26.923 2.28 2.28 0.00 1.82
3371 3966 8.819974 TGTTCAGAGATGCAAAAGAAAATTTTC 58.180 29.630 21.00 21.00 37.45 2.29
3374 3969 9.903682 TCAGAGATGCAAAAGAAAATTTTCTAG 57.096 29.630 28.95 22.25 46.22 2.43
3375 3970 9.903682 CAGAGATGCAAAAGAAAATTTTCTAGA 57.096 29.630 28.95 14.20 46.22 2.43
3377 3972 9.905171 GAGATGCAAAAGAAAATTTTCTAGAGT 57.095 29.630 28.95 14.09 46.22 3.24
3392 3987 6.696441 TTCTAGAGTAAGTAGTAGCAAGGC 57.304 41.667 0.00 0.00 0.00 4.35
3393 3988 6.003859 TCTAGAGTAAGTAGTAGCAAGGCT 57.996 41.667 0.00 0.00 43.41 4.58
3394 3989 6.424883 TCTAGAGTAAGTAGTAGCAAGGCTT 58.575 40.000 0.00 0.00 40.44 4.35
3395 3990 5.331876 AGAGTAAGTAGTAGCAAGGCTTG 57.668 43.478 22.75 22.75 40.44 4.01
3396 3991 4.773149 AGAGTAAGTAGTAGCAAGGCTTGT 59.227 41.667 26.71 16.28 40.44 3.16
3397 3992 5.246429 AGAGTAAGTAGTAGCAAGGCTTGTT 59.754 40.000 26.71 23.58 40.44 2.83
3398 3993 6.436532 AGAGTAAGTAGTAGCAAGGCTTGTTA 59.563 38.462 26.71 22.51 40.44 2.41
3399 3994 6.631962 AGTAAGTAGTAGCAAGGCTTGTTAG 58.368 40.000 26.71 3.46 40.44 2.34
3400 3995 5.740290 AAGTAGTAGCAAGGCTTGTTAGA 57.260 39.130 26.71 13.88 40.44 2.10
3401 3996 5.941555 AGTAGTAGCAAGGCTTGTTAGAT 57.058 39.130 26.71 18.21 40.44 1.98
3402 3997 6.301169 AGTAGTAGCAAGGCTTGTTAGATT 57.699 37.500 26.71 15.70 40.44 2.40
3403 3998 6.342111 AGTAGTAGCAAGGCTTGTTAGATTC 58.658 40.000 26.71 13.74 40.44 2.52
3404 3999 4.184629 AGTAGCAAGGCTTGTTAGATTCG 58.815 43.478 26.71 0.04 40.44 3.34
3405 4000 3.059352 AGCAAGGCTTGTTAGATTCGT 57.941 42.857 26.71 0.23 33.89 3.85
3406 4001 3.412386 AGCAAGGCTTGTTAGATTCGTT 58.588 40.909 26.71 0.00 33.89 3.85
3407 4002 3.189287 AGCAAGGCTTGTTAGATTCGTTG 59.811 43.478 26.71 0.00 33.89 4.10
3408 4003 3.492313 CAAGGCTTGTTAGATTCGTTGC 58.508 45.455 19.07 0.00 0.00 4.17
3409 4004 2.778299 AGGCTTGTTAGATTCGTTGCA 58.222 42.857 0.00 0.00 0.00 4.08
3410 4005 3.146066 AGGCTTGTTAGATTCGTTGCAA 58.854 40.909 0.00 0.00 0.00 4.08
3411 4006 3.568007 AGGCTTGTTAGATTCGTTGCAAA 59.432 39.130 0.00 0.00 0.00 3.68
3412 4007 4.218417 AGGCTTGTTAGATTCGTTGCAAAT 59.782 37.500 0.00 0.00 0.00 2.32
3413 4008 4.324402 GGCTTGTTAGATTCGTTGCAAATG 59.676 41.667 0.00 0.00 0.00 2.32
3414 4009 4.201523 GCTTGTTAGATTCGTTGCAAATGC 60.202 41.667 0.00 0.00 42.50 3.56
3427 4022 3.863142 GCAAATGCAAGAGATGGAAGT 57.137 42.857 0.00 0.00 41.59 3.01
3428 4023 4.184079 GCAAATGCAAGAGATGGAAGTT 57.816 40.909 0.00 0.00 41.59 2.66
3429 4024 5.314923 GCAAATGCAAGAGATGGAAGTTA 57.685 39.130 0.00 0.00 41.59 2.24
3430 4025 5.899299 GCAAATGCAAGAGATGGAAGTTAT 58.101 37.500 0.00 0.00 41.59 1.89
3431 4026 5.747197 GCAAATGCAAGAGATGGAAGTTATG 59.253 40.000 0.00 0.00 41.59 1.90
3432 4027 6.405065 GCAAATGCAAGAGATGGAAGTTATGA 60.405 38.462 0.00 0.00 41.59 2.15
3433 4028 6.690194 AATGCAAGAGATGGAAGTTATGAC 57.310 37.500 0.00 0.00 30.96 3.06
3434 4029 5.164620 TGCAAGAGATGGAAGTTATGACA 57.835 39.130 0.00 0.00 0.00 3.58
3435 4030 4.937620 TGCAAGAGATGGAAGTTATGACAC 59.062 41.667 0.00 0.00 0.00 3.67
3436 4031 5.181748 GCAAGAGATGGAAGTTATGACACT 58.818 41.667 0.00 0.00 0.00 3.55
3437 4032 5.064452 GCAAGAGATGGAAGTTATGACACTG 59.936 44.000 0.00 0.00 0.00 3.66
3438 4033 5.350504 AGAGATGGAAGTTATGACACTGG 57.649 43.478 0.00 0.00 0.00 4.00
3439 4034 5.026121 AGAGATGGAAGTTATGACACTGGA 58.974 41.667 0.00 0.00 0.00 3.86
3440 4035 5.664908 AGAGATGGAAGTTATGACACTGGAT 59.335 40.000 0.00 0.00 0.00 3.41
3441 4036 5.678583 AGATGGAAGTTATGACACTGGATG 58.321 41.667 0.00 0.00 0.00 3.51
3452 4047 1.608055 CACTGGATGTGGTGCTTTCA 58.392 50.000 0.00 0.00 42.68 2.69
3453 4048 1.267806 CACTGGATGTGGTGCTTTCAC 59.732 52.381 0.00 0.00 42.68 3.18
3455 4050 1.538512 CTGGATGTGGTGCTTTCACAG 59.461 52.381 11.55 0.00 46.49 3.66
3456 4051 1.142667 TGGATGTGGTGCTTTCACAGA 59.857 47.619 11.55 0.00 46.49 3.41
3457 4052 2.229792 GGATGTGGTGCTTTCACAGAA 58.770 47.619 11.55 0.00 46.49 3.02
3458 4053 2.821969 GGATGTGGTGCTTTCACAGAAT 59.178 45.455 11.55 0.00 46.49 2.40
3459 4054 3.119708 GGATGTGGTGCTTTCACAGAATC 60.120 47.826 11.55 6.08 46.49 2.52
3460 4055 2.929641 TGTGGTGCTTTCACAGAATCA 58.070 42.857 3.85 0.00 44.87 2.57
3461 4056 3.489355 TGTGGTGCTTTCACAGAATCAT 58.511 40.909 3.85 0.00 44.87 2.45
3462 4057 3.253921 TGTGGTGCTTTCACAGAATCATG 59.746 43.478 3.85 0.00 44.87 3.07
3463 4058 3.254166 GTGGTGCTTTCACAGAATCATGT 59.746 43.478 0.00 0.00 44.87 3.21
3464 4059 3.503363 TGGTGCTTTCACAGAATCATGTC 59.497 43.478 0.00 0.00 44.87 3.06
3465 4060 3.755378 GGTGCTTTCACAGAATCATGTCT 59.245 43.478 0.00 0.00 44.87 3.41
3475 4070 5.305139 CAGAATCATGTCTGCACAAATCA 57.695 39.130 0.79 0.00 38.74 2.57
3476 4071 5.891451 CAGAATCATGTCTGCACAAATCAT 58.109 37.500 0.79 0.00 38.74 2.45
3477 4072 7.023197 CAGAATCATGTCTGCACAAATCATA 57.977 36.000 0.79 0.00 38.74 2.15
3478 4073 7.649057 CAGAATCATGTCTGCACAAATCATAT 58.351 34.615 0.79 0.00 38.74 1.78
3479 4074 8.780249 CAGAATCATGTCTGCACAAATCATATA 58.220 33.333 0.79 0.00 38.74 0.86
3480 4075 9.516546 AGAATCATGTCTGCACAAATCATATAT 57.483 29.630 0.00 0.00 35.64 0.86
3481 4076 9.770503 GAATCATGTCTGCACAAATCATATATC 57.229 33.333 0.00 0.00 35.64 1.63
3482 4077 7.355332 TCATGTCTGCACAAATCATATATCG 57.645 36.000 0.00 0.00 35.64 2.92
3483 4078 7.153985 TCATGTCTGCACAAATCATATATCGA 58.846 34.615 0.00 0.00 35.64 3.59
3484 4079 7.330208 TCATGTCTGCACAAATCATATATCGAG 59.670 37.037 0.00 0.00 35.64 4.04
3485 4080 5.406477 TGTCTGCACAAATCATATATCGAGC 59.594 40.000 0.00 0.00 0.00 5.03
3486 4081 5.406477 GTCTGCACAAATCATATATCGAGCA 59.594 40.000 0.00 0.00 0.00 4.26
3487 4082 5.406477 TCTGCACAAATCATATATCGAGCAC 59.594 40.000 0.00 0.00 0.00 4.40
3488 4083 5.299949 TGCACAAATCATATATCGAGCACT 58.700 37.500 0.00 0.00 0.00 4.40
3489 4084 5.178067 TGCACAAATCATATATCGAGCACTG 59.822 40.000 0.00 0.00 0.00 3.66
3490 4085 5.178252 GCACAAATCATATATCGAGCACTGT 59.822 40.000 0.00 0.00 0.00 3.55
3491 4086 6.366061 GCACAAATCATATATCGAGCACTGTA 59.634 38.462 0.00 0.00 0.00 2.74
3492 4087 7.411264 GCACAAATCATATATCGAGCACTGTAG 60.411 40.741 0.00 0.00 0.00 2.74
3493 4088 7.596621 CACAAATCATATATCGAGCACTGTAGT 59.403 37.037 0.00 0.00 0.00 2.73
3506 4101 4.935885 CACTGTAGTGCTCCTGAAATTC 57.064 45.455 0.00 0.00 39.39 2.17
3507 4102 3.686726 CACTGTAGTGCTCCTGAAATTCC 59.313 47.826 0.00 0.00 39.39 3.01
3508 4103 3.584848 ACTGTAGTGCTCCTGAAATTCCT 59.415 43.478 0.00 0.00 0.00 3.36
3509 4104 3.937706 CTGTAGTGCTCCTGAAATTCCTG 59.062 47.826 0.00 0.00 0.00 3.86
3510 4105 3.327757 TGTAGTGCTCCTGAAATTCCTGT 59.672 43.478 0.00 0.00 0.00 4.00
3511 4106 3.515602 AGTGCTCCTGAAATTCCTGTT 57.484 42.857 0.00 0.00 0.00 3.16
3512 4107 3.837355 AGTGCTCCTGAAATTCCTGTTT 58.163 40.909 0.00 0.00 0.00 2.83
3513 4108 3.571401 AGTGCTCCTGAAATTCCTGTTTG 59.429 43.478 0.00 0.00 0.00 2.93
3514 4109 3.319122 GTGCTCCTGAAATTCCTGTTTGT 59.681 43.478 0.00 0.00 0.00 2.83
3515 4110 3.318839 TGCTCCTGAAATTCCTGTTTGTG 59.681 43.478 0.00 0.00 0.00 3.33
3516 4111 3.858503 GCTCCTGAAATTCCTGTTTGTGC 60.859 47.826 0.00 0.00 0.00 4.57
3517 4112 2.627699 TCCTGAAATTCCTGTTTGTGCC 59.372 45.455 0.00 0.00 0.00 5.01
3518 4113 2.629617 CCTGAAATTCCTGTTTGTGCCT 59.370 45.455 0.00 0.00 0.00 4.75
3519 4114 3.553508 CCTGAAATTCCTGTTTGTGCCTG 60.554 47.826 0.00 0.00 0.00 4.85
3520 4115 3.030291 TGAAATTCCTGTTTGTGCCTGT 58.970 40.909 0.00 0.00 0.00 4.00
3521 4116 4.211125 TGAAATTCCTGTTTGTGCCTGTA 58.789 39.130 0.00 0.00 0.00 2.74
3522 4117 4.646945 TGAAATTCCTGTTTGTGCCTGTAA 59.353 37.500 0.00 0.00 0.00 2.41
3523 4118 5.304101 TGAAATTCCTGTTTGTGCCTGTAAT 59.696 36.000 0.00 0.00 0.00 1.89
3524 4119 5.391312 AATTCCTGTTTGTGCCTGTAATC 57.609 39.130 0.00 0.00 0.00 1.75
3525 4120 3.788227 TCCTGTTTGTGCCTGTAATCT 57.212 42.857 0.00 0.00 0.00 2.40
3526 4121 4.098914 TCCTGTTTGTGCCTGTAATCTT 57.901 40.909 0.00 0.00 0.00 2.40
3527 4122 4.469657 TCCTGTTTGTGCCTGTAATCTTT 58.530 39.130 0.00 0.00 0.00 2.52
3528 4123 4.892934 TCCTGTTTGTGCCTGTAATCTTTT 59.107 37.500 0.00 0.00 0.00 2.27
3529 4124 4.984161 CCTGTTTGTGCCTGTAATCTTTTG 59.016 41.667 0.00 0.00 0.00 2.44
3530 4125 4.367450 TGTTTGTGCCTGTAATCTTTTGC 58.633 39.130 0.00 0.00 0.00 3.68
3531 4126 4.142071 TGTTTGTGCCTGTAATCTTTTGCA 60.142 37.500 0.00 0.00 0.00 4.08
3532 4127 4.662468 TTGTGCCTGTAATCTTTTGCAA 57.338 36.364 0.00 0.00 0.00 4.08
3533 4128 3.976169 TGTGCCTGTAATCTTTTGCAAC 58.024 40.909 0.00 0.00 0.00 4.17
3534 4129 3.382865 TGTGCCTGTAATCTTTTGCAACA 59.617 39.130 0.00 0.00 0.00 3.33
3535 4130 4.039004 TGTGCCTGTAATCTTTTGCAACAT 59.961 37.500 0.00 0.00 0.00 2.71
3536 4131 5.242615 TGTGCCTGTAATCTTTTGCAACATA 59.757 36.000 0.00 0.00 0.00 2.29
3537 4132 6.071447 TGTGCCTGTAATCTTTTGCAACATAT 60.071 34.615 0.00 0.00 0.00 1.78
3538 4133 6.254157 GTGCCTGTAATCTTTTGCAACATATG 59.746 38.462 0.00 0.00 0.00 1.78
3552 4147 5.055642 CAACATATGCTGCTTGATATGGG 57.944 43.478 17.52 9.23 37.01 4.00
3553 4148 4.645863 ACATATGCTGCTTGATATGGGA 57.354 40.909 17.52 0.00 37.01 4.37
3554 4149 5.188988 ACATATGCTGCTTGATATGGGAT 57.811 39.130 17.52 1.07 37.01 3.85
3555 4150 5.191426 ACATATGCTGCTTGATATGGGATC 58.809 41.667 17.52 0.00 37.01 3.36
3556 4151 5.045066 ACATATGCTGCTTGATATGGGATCT 60.045 40.000 17.52 0.53 37.01 2.75
3557 4152 3.136009 TGCTGCTTGATATGGGATCTG 57.864 47.619 0.00 0.00 0.00 2.90
3558 4153 2.224695 TGCTGCTTGATATGGGATCTGG 60.225 50.000 0.00 0.00 0.00 3.86
3559 4154 2.434428 CTGCTTGATATGGGATCTGGC 58.566 52.381 0.00 0.00 0.00 4.85
3560 4155 1.776063 TGCTTGATATGGGATCTGGCA 59.224 47.619 0.00 0.00 0.00 4.92
3561 4156 2.175284 TGCTTGATATGGGATCTGGCAA 59.825 45.455 0.00 0.00 0.00 4.52
3562 4157 3.181426 TGCTTGATATGGGATCTGGCAAT 60.181 43.478 0.00 0.00 0.00 3.56
3563 4158 3.830755 GCTTGATATGGGATCTGGCAATT 59.169 43.478 0.00 0.00 0.00 2.32
3564 4159 5.012239 GCTTGATATGGGATCTGGCAATTA 58.988 41.667 0.00 0.00 0.00 1.40
3565 4160 5.655532 GCTTGATATGGGATCTGGCAATTAT 59.344 40.000 0.00 0.00 0.00 1.28
3566 4161 6.405508 GCTTGATATGGGATCTGGCAATTATG 60.406 42.308 0.00 0.00 0.00 1.90
3567 4162 6.143551 TGATATGGGATCTGGCAATTATGT 57.856 37.500 0.00 0.00 0.00 2.29
3568 4163 6.554784 TGATATGGGATCTGGCAATTATGTT 58.445 36.000 0.00 0.00 0.00 2.71
3569 4164 6.660521 TGATATGGGATCTGGCAATTATGTTC 59.339 38.462 0.00 0.00 0.00 3.18
3570 4165 4.248174 TGGGATCTGGCAATTATGTTCA 57.752 40.909 0.00 0.00 0.00 3.18
3571 4166 4.209538 TGGGATCTGGCAATTATGTTCAG 58.790 43.478 0.00 0.00 33.94 3.02
3572 4167 4.079844 TGGGATCTGGCAATTATGTTCAGA 60.080 41.667 0.00 0.00 40.48 3.27
3573 4168 4.518211 GGGATCTGGCAATTATGTTCAGAG 59.482 45.833 0.00 0.00 39.99 3.35
3574 4169 5.371526 GGATCTGGCAATTATGTTCAGAGA 58.628 41.667 0.00 0.00 39.99 3.10
3575 4170 6.002704 GGATCTGGCAATTATGTTCAGAGAT 58.997 40.000 0.00 0.00 39.99 2.75
3576 4171 6.072618 GGATCTGGCAATTATGTTCAGAGATG 60.073 42.308 0.00 0.00 39.99 2.90
3577 4172 4.577693 TCTGGCAATTATGTTCAGAGATGC 59.422 41.667 0.00 0.00 35.56 3.91
3578 4173 4.271661 TGGCAATTATGTTCAGAGATGCA 58.728 39.130 0.00 0.00 34.37 3.96
3579 4174 4.705991 TGGCAATTATGTTCAGAGATGCAA 59.294 37.500 0.00 0.00 34.37 4.08
3580 4175 5.185442 TGGCAATTATGTTCAGAGATGCAAA 59.815 36.000 0.00 0.00 34.37 3.68
3581 4176 6.101332 GGCAATTATGTTCAGAGATGCAAAA 58.899 36.000 0.00 0.00 34.37 2.44
3582 4177 6.255020 GGCAATTATGTTCAGAGATGCAAAAG 59.745 38.462 0.00 0.00 34.37 2.27
3583 4178 7.031372 GCAATTATGTTCAGAGATGCAAAAGA 58.969 34.615 0.00 0.00 33.00 2.52
3584 4179 7.543172 GCAATTATGTTCAGAGATGCAAAAGAA 59.457 33.333 0.00 0.00 33.00 2.52
3585 4180 9.414295 CAATTATGTTCAGAGATGCAAAAGAAA 57.586 29.630 0.00 0.00 0.00 2.52
3586 4181 9.985730 AATTATGTTCAGAGATGCAAAAGAAAA 57.014 25.926 0.00 0.00 0.00 2.29
3587 4182 8.801715 TTATGTTCAGAGATGCAAAAGAAAAC 57.198 30.769 0.00 0.00 0.00 2.43
3590 4185 7.267128 TGTTCAGAGATGCAAAAGAAAACAAT 58.733 30.769 0.00 0.00 0.00 2.71
3604 4199 9.598517 AAAAGAAAACAATTCAGATGCAACTTA 57.401 25.926 0.00 0.00 0.00 2.24
3639 4234 4.985538 TCCTAGCAAAGAAACTTGATGGT 58.014 39.130 0.00 0.00 0.00 3.55
3640 4235 6.121776 TCCTAGCAAAGAAACTTGATGGTA 57.878 37.500 0.00 0.00 0.00 3.25
3676 4617 9.985730 TTATGTTCAGAGATGCAAAAGAAAATT 57.014 25.926 0.00 0.00 0.00 1.82
3677 4618 8.897872 ATGTTCAGAGATGCAAAAGAAAATTT 57.102 26.923 0.00 0.00 0.00 1.82
3678 4619 8.721019 TGTTCAGAGATGCAAAAGAAAATTTT 57.279 26.923 2.28 2.28 0.00 1.82
3679 4620 8.819974 TGTTCAGAGATGCAAAAGAAAATTTTC 58.180 29.630 21.00 21.00 37.45 2.29
3682 4623 9.903682 TCAGAGATGCAAAAGAAAATTTTCTAG 57.096 29.630 28.95 22.25 46.22 2.43
3683 4624 9.903682 CAGAGATGCAAAAGAAAATTTTCTAGA 57.096 29.630 28.95 14.20 46.22 2.43
3685 4626 9.905171 GAGATGCAAAAGAAAATTTTCTAGAGT 57.095 29.630 28.95 14.09 46.22 3.24
3700 4641 6.696441 TTCTAGAGTAAGTAGTAGCAAGGC 57.304 41.667 0.00 0.00 0.00 4.35
3701 4642 6.003859 TCTAGAGTAAGTAGTAGCAAGGCT 57.996 41.667 0.00 0.00 43.41 4.58
3702 4643 6.424883 TCTAGAGTAAGTAGTAGCAAGGCTT 58.575 40.000 0.00 0.00 40.44 4.35
3703 4644 5.331876 AGAGTAAGTAGTAGCAAGGCTTG 57.668 43.478 22.75 22.75 40.44 4.01
3708 4649 5.740290 AAGTAGTAGCAAGGCTTGTTAGA 57.260 39.130 26.71 13.88 40.44 2.10
3709 4650 5.941555 AGTAGTAGCAAGGCTTGTTAGAT 57.058 39.130 26.71 18.21 40.44 1.98
3721 4662 4.324402 GGCTTGTTAGATTCGTTGCAAATG 59.676 41.667 0.00 0.00 0.00 2.32
3822 4767 4.208632 GCTACAGGCGCTTCATGT 57.791 55.556 7.64 10.19 42.92 3.21
3828 4773 2.042831 AGGCGCTTCATGTCTTGCC 61.043 57.895 7.64 11.93 42.76 4.52
3831 4776 1.136147 CGCTTCATGTCTTGCCTGC 59.864 57.895 0.00 0.00 0.00 4.85
3832 4777 1.509923 GCTTCATGTCTTGCCTGCC 59.490 57.895 0.00 0.00 0.00 4.85
3841 4786 0.698238 TCTTGCCTGCCAGGTACAAT 59.302 50.000 13.35 0.00 37.80 2.71
3844 4789 1.544724 TGCCTGCCAGGTACAATTTC 58.455 50.000 13.35 0.00 37.80 2.17
3845 4790 0.817654 GCCTGCCAGGTACAATTTCC 59.182 55.000 13.35 0.00 37.80 3.13
3854 4799 6.126332 TGCCAGGTACAATTTCCATATTCCTA 60.126 38.462 0.00 0.00 0.00 2.94
3855 4800 6.206829 GCCAGGTACAATTTCCATATTCCTAC 59.793 42.308 0.00 0.00 0.00 3.18
3896 4841 2.666862 TTGCGTTGCCGGTACAGG 60.667 61.111 7.81 7.81 33.68 4.00
3908 4853 2.698797 CCGGTACAGGTTATGAGGATGT 59.301 50.000 3.54 0.00 0.00 3.06
3918 4863 4.935808 GGTTATGAGGATGTCTGTTTCGTT 59.064 41.667 0.00 0.00 0.00 3.85
3921 4866 7.360361 GTTATGAGGATGTCTGTTTCGTTTTT 58.640 34.615 0.00 0.00 0.00 1.94
3950 4902 1.098050 GGCAGCTGAATAAGTGTGGG 58.902 55.000 20.43 0.00 0.00 4.61
3955 4907 3.804325 CAGCTGAATAAGTGTGGGATACG 59.196 47.826 8.42 0.00 37.60 3.06
3957 4909 4.081087 AGCTGAATAAGTGTGGGATACGTT 60.081 41.667 0.00 0.00 37.60 3.99
3979 4931 3.608316 TTTGCAGGTCAAAAAGCTTGT 57.392 38.095 0.00 0.00 41.36 3.16
3980 4932 4.727507 TTTGCAGGTCAAAAAGCTTGTA 57.272 36.364 0.00 0.00 41.36 2.41
3981 4933 3.988379 TGCAGGTCAAAAAGCTTGTAG 57.012 42.857 0.00 0.00 31.91 2.74
3982 4934 3.550820 TGCAGGTCAAAAAGCTTGTAGA 58.449 40.909 0.00 0.00 31.91 2.59
3983 4935 3.565482 TGCAGGTCAAAAAGCTTGTAGAG 59.435 43.478 0.00 0.00 31.91 2.43
3984 4936 3.565902 GCAGGTCAAAAAGCTTGTAGAGT 59.434 43.478 0.00 0.00 31.91 3.24
3985 4937 4.555511 GCAGGTCAAAAAGCTTGTAGAGTG 60.556 45.833 0.00 0.64 31.91 3.51
3986 4938 4.576463 CAGGTCAAAAAGCTTGTAGAGTGT 59.424 41.667 0.00 0.00 31.91 3.55
3987 4939 5.066505 CAGGTCAAAAAGCTTGTAGAGTGTT 59.933 40.000 0.00 0.00 31.91 3.32
3988 4940 6.260050 CAGGTCAAAAAGCTTGTAGAGTGTTA 59.740 38.462 0.00 0.00 31.91 2.41
3989 4941 6.260271 AGGTCAAAAAGCTTGTAGAGTGTTAC 59.740 38.462 0.00 0.00 29.11 2.50
3990 4942 6.260271 GGTCAAAAAGCTTGTAGAGTGTTACT 59.740 38.462 0.00 0.00 0.00 2.24
3991 4943 7.345943 GTCAAAAAGCTTGTAGAGTGTTACTC 58.654 38.462 0.00 0.79 45.38 2.59
4006 4958 8.379485 GAGTGTTACTCAACTCGTAGAATTAC 57.621 38.462 4.20 0.00 44.45 1.89
4007 4959 7.879070 AGTGTTACTCAACTCGTAGAATTACA 58.121 34.615 0.00 0.00 34.09 2.41
4008 4960 8.355169 AGTGTTACTCAACTCGTAGAATTACAA 58.645 33.333 0.00 0.00 34.09 2.41
4009 4961 9.136952 GTGTTACTCAACTCGTAGAATTACAAT 57.863 33.333 0.00 0.00 34.09 2.71
4010 4962 9.350357 TGTTACTCAACTCGTAGAATTACAATC 57.650 33.333 0.00 0.00 34.09 2.67
4011 4963 9.350357 GTTACTCAACTCGTAGAATTACAATCA 57.650 33.333 0.00 0.00 34.09 2.57
4013 4965 8.635877 ACTCAACTCGTAGAATTACAATCATC 57.364 34.615 0.00 0.00 34.09 2.92
4014 4966 8.251026 ACTCAACTCGTAGAATTACAATCATCA 58.749 33.333 0.00 0.00 34.09 3.07
4015 4967 8.996024 TCAACTCGTAGAATTACAATCATCAA 57.004 30.769 0.00 0.00 34.09 2.57
4016 4968 8.869897 TCAACTCGTAGAATTACAATCATCAAC 58.130 33.333 0.00 0.00 34.09 3.18
4017 4969 8.655970 CAACTCGTAGAATTACAATCATCAACA 58.344 33.333 0.00 0.00 34.09 3.33
4018 4970 8.412608 ACTCGTAGAATTACAATCATCAACAG 57.587 34.615 0.00 0.00 34.09 3.16
4019 4971 8.035394 ACTCGTAGAATTACAATCATCAACAGT 58.965 33.333 0.00 0.00 34.09 3.55
4020 4972 8.771920 TCGTAGAATTACAATCATCAACAGTT 57.228 30.769 0.00 0.00 0.00 3.16
4021 4973 9.863845 TCGTAGAATTACAATCATCAACAGTTA 57.136 29.630 0.00 0.00 0.00 2.24
4023 4975 9.922305 GTAGAATTACAATCATCAACAGTTAGC 57.078 33.333 0.00 0.00 0.00 3.09
4024 4976 8.798859 AGAATTACAATCATCAACAGTTAGCT 57.201 30.769 0.00 0.00 0.00 3.32
4026 4978 6.741992 TTACAATCATCAACAGTTAGCTGG 57.258 37.500 11.56 0.00 46.62 4.85
4027 4979 4.910195 ACAATCATCAACAGTTAGCTGGA 58.090 39.130 11.56 0.00 46.62 3.86
4028 4980 4.697352 ACAATCATCAACAGTTAGCTGGAC 59.303 41.667 11.56 0.00 46.62 4.02
4029 4981 4.558226 ATCATCAACAGTTAGCTGGACA 57.442 40.909 11.56 0.00 46.62 4.02
4030 4982 3.930336 TCATCAACAGTTAGCTGGACAG 58.070 45.455 11.56 0.00 46.62 3.51
4031 4983 3.324846 TCATCAACAGTTAGCTGGACAGT 59.675 43.478 11.56 0.00 46.62 3.55
4032 4984 3.838244 TCAACAGTTAGCTGGACAGTT 57.162 42.857 11.56 1.63 46.62 3.16
4033 4985 4.150897 TCAACAGTTAGCTGGACAGTTT 57.849 40.909 11.56 0.00 46.62 2.66
4034 4986 4.127171 TCAACAGTTAGCTGGACAGTTTC 58.873 43.478 11.56 0.00 46.62 2.78
4035 4987 3.127425 ACAGTTAGCTGGACAGTTTCC 57.873 47.619 11.56 0.00 46.62 3.13
4036 4988 2.706190 ACAGTTAGCTGGACAGTTTCCT 59.294 45.455 11.56 0.00 46.10 3.36
4037 4989 3.244249 ACAGTTAGCTGGACAGTTTCCTC 60.244 47.826 11.56 0.00 46.10 3.71
4038 4990 2.972713 AGTTAGCTGGACAGTTTCCTCA 59.027 45.455 0.00 0.00 46.10 3.86
4039 4991 3.007398 AGTTAGCTGGACAGTTTCCTCAG 59.993 47.826 0.00 0.00 46.10 3.35
4040 4992 0.689623 AGCTGGACAGTTTCCTCAGG 59.310 55.000 0.82 0.00 46.10 3.86
4041 4993 0.687354 GCTGGACAGTTTCCTCAGGA 59.313 55.000 0.00 0.00 46.10 3.86
4042 4994 1.609320 GCTGGACAGTTTCCTCAGGAC 60.609 57.143 0.00 0.00 46.10 3.85
4043 4995 1.002544 CTGGACAGTTTCCTCAGGACC 59.997 57.143 0.00 0.00 46.10 4.46
4044 4996 1.056660 GGACAGTTTCCTCAGGACCA 58.943 55.000 0.00 0.00 41.95 4.02
4045 4997 1.002544 GGACAGTTTCCTCAGGACCAG 59.997 57.143 0.00 0.00 41.95 4.00
4046 4998 1.971357 GACAGTTTCCTCAGGACCAGA 59.029 52.381 0.00 0.00 0.00 3.86
4047 4999 2.368875 GACAGTTTCCTCAGGACCAGAA 59.631 50.000 0.00 0.00 0.00 3.02
4048 5000 2.104963 ACAGTTTCCTCAGGACCAGAAC 59.895 50.000 0.00 0.00 0.00 3.01
4049 5001 1.700186 AGTTTCCTCAGGACCAGAACC 59.300 52.381 0.00 0.00 0.00 3.62
4050 5002 1.064825 TTTCCTCAGGACCAGAACCC 58.935 55.000 0.00 0.00 0.00 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.675348 GAGAAAGAACAATGCCCTCGAG 59.325 50.000 5.13 5.13 0.00 4.04
18 19 1.302511 GCAAACGCCTCCAAGGAGA 60.303 57.895 17.57 0.00 44.53 3.71
43 45 2.930562 GGTGTGTGGAGGGAGGCT 60.931 66.667 0.00 0.00 0.00 4.58
56 58 0.399233 GGGAGGCTAGAGGATGGTGT 60.399 60.000 0.00 0.00 0.00 4.16
76 78 0.179001 CCGAGGTTTGGGTTTCACCT 60.179 55.000 0.00 0.00 44.05 4.00
142 145 1.114722 CCAAACAGCTCCCAAAGGCA 61.115 55.000 0.00 0.00 0.00 4.75
172 175 2.409651 GCCAAACGCACCAAACGA 59.590 55.556 0.00 0.00 37.47 3.85
173 176 3.021788 CGCCAAACGCACCAAACG 61.022 61.111 0.00 0.00 37.30 3.60
195 199 3.243636 GGACGAAGAGGACACACTAACAA 60.244 47.826 0.00 0.00 0.00 2.83
199 203 2.281539 TGGACGAAGAGGACACACTA 57.718 50.000 0.00 0.00 0.00 2.74
200 204 1.341531 CTTGGACGAAGAGGACACACT 59.658 52.381 0.00 0.00 32.82 3.55
252 257 2.238521 TCCTCAAACAGAATTGCCCAC 58.761 47.619 0.00 0.00 0.00 4.61
272 277 1.652563 GACGAGCCGCCAAAGTTTT 59.347 52.632 0.00 0.00 0.00 2.43
309 314 0.106708 TCGAAGGATGGCCACATAGC 59.893 55.000 8.16 0.00 37.47 2.97
325 330 1.445410 CGAGAATGGTTGCCGTCGA 60.445 57.895 0.00 0.00 0.00 4.20
359 364 2.505982 CACCGCCGGAAGATGGAT 59.494 61.111 11.71 0.00 0.00 3.41
391 396 1.768684 GCCACAACCTCCTCACCTGA 61.769 60.000 0.00 0.00 0.00 3.86
446 452 3.834799 CGACAGCTACGGACCCCC 61.835 72.222 4.84 0.00 0.00 5.40
462 468 2.343758 CAGGGAGTGTGGTCACCG 59.656 66.667 0.00 0.00 44.83 4.94
570 581 4.954875 AGAAGGATAGATCAAAGAAGCGG 58.045 43.478 0.00 0.00 0.00 5.52
571 582 7.206687 AGTTAGAAGGATAGATCAAAGAAGCG 58.793 38.462 0.00 0.00 0.00 4.68
625 638 1.226746 AAGAAAGGAAGACGTTGGCG 58.773 50.000 0.00 0.00 44.93 5.69
626 639 2.287608 CCAAAGAAAGGAAGACGTTGGC 60.288 50.000 0.00 0.00 36.69 4.52
637 672 2.689983 AGCACACAGAACCAAAGAAAGG 59.310 45.455 0.00 0.00 0.00 3.11
652 689 3.179830 CGGTCAGTATTACAGAGCACAC 58.820 50.000 15.73 0.00 32.63 3.82
657 694 4.713824 TCAACCGGTCAGTATTACAGAG 57.286 45.455 8.04 0.00 0.00 3.35
666 703 0.110486 AAAGCCATCAACCGGTCAGT 59.890 50.000 8.04 0.00 0.00 3.41
670 707 6.538945 AAATTAATAAAGCCATCAACCGGT 57.461 33.333 0.00 0.00 0.00 5.28
686 723 6.461509 CGAGCCTGGCCTGATTTTAAATTAAT 60.462 38.462 16.57 0.00 0.00 1.40
693 730 0.908910 TCGAGCCTGGCCTGATTTTA 59.091 50.000 16.57 0.00 0.00 1.52
697 734 3.859414 GCTCGAGCCTGGCCTGAT 61.859 66.667 27.22 0.00 34.31 2.90
722 759 5.477291 AGAGAAAAGACATCAACCTAGTCGA 59.523 40.000 0.00 0.00 37.36 4.20
723 760 5.715070 AGAGAAAAGACATCAACCTAGTCG 58.285 41.667 0.00 0.00 37.36 4.18
728 765 7.067496 TCTGTTAGAGAAAAGACATCAACCT 57.933 36.000 0.00 0.00 0.00 3.50
749 786 5.730296 TGTAGTCTTCTTCCTCCTTTCTG 57.270 43.478 0.00 0.00 0.00 3.02
751 788 6.702329 TCATTGTAGTCTTCTTCCTCCTTTC 58.298 40.000 0.00 0.00 0.00 2.62
754 791 7.147637 GGTTATCATTGTAGTCTTCTTCCTCCT 60.148 40.741 0.00 0.00 0.00 3.69
755 792 6.987404 GGTTATCATTGTAGTCTTCTTCCTCC 59.013 42.308 0.00 0.00 0.00 4.30
761 798 7.726033 AGAGTGGTTATCATTGTAGTCTTCT 57.274 36.000 0.00 0.00 0.00 2.85
782 819 9.774742 GAAAAACTGTTGGTTATAAGCATAGAG 57.225 33.333 24.46 19.96 37.12 2.43
783 820 9.515226 AGAAAAACTGTTGGTTATAAGCATAGA 57.485 29.630 24.46 9.12 37.12 1.98
796 833 6.873605 ACCAGAAAGAAAAGAAAAACTGTTGG 59.126 34.615 0.00 0.00 0.00 3.77
797 834 7.598493 TCACCAGAAAGAAAAGAAAAACTGTTG 59.402 33.333 0.00 0.00 0.00 3.33
799 836 7.227049 TCACCAGAAAGAAAAGAAAAACTGT 57.773 32.000 0.00 0.00 0.00 3.55
817 854 8.616076 GTTTATAATCTGAGGTTCATTCACCAG 58.384 37.037 0.00 0.00 39.62 4.00
820 857 9.941664 CATGTTTATAATCTGAGGTTCATTCAC 57.058 33.333 0.00 0.00 0.00 3.18
849 889 4.342951 AGTGGCCACAAATATGGATCATTG 59.657 41.667 36.39 0.00 43.02 2.82
852 892 3.668141 AGTGGCCACAAATATGGATCA 57.332 42.857 36.39 0.00 43.02 2.92
916 974 5.570234 TTATTTGCGCTTTTTACCCCTAG 57.430 39.130 9.73 0.00 0.00 3.02
1030 1095 2.266055 GTTGCAGAGGGAGGACGG 59.734 66.667 0.00 0.00 0.00 4.79
1038 1103 1.801178 GGAGAAAAGTCGTTGCAGAGG 59.199 52.381 0.00 0.00 0.00 3.69
1040 1105 1.542547 GGGGAGAAAAGTCGTTGCAGA 60.543 52.381 0.00 0.00 0.00 4.26
1072 1137 1.215382 GGTTTGGCTCGATTTGGGC 59.785 57.895 0.00 0.00 0.00 5.36
1316 1382 4.051932 GAGGGATTCTCGGTGGGT 57.948 61.111 0.00 0.00 32.18 4.51
1336 1412 2.002586 CTAGTCAATCACCGCAACCTG 58.997 52.381 0.00 0.00 0.00 4.00
1376 1452 1.683319 GGAGGCCAAAATCAGGGAGAC 60.683 57.143 5.01 0.00 0.00 3.36
1379 1455 0.625849 GAGGAGGCCAAAATCAGGGA 59.374 55.000 5.01 0.00 0.00 4.20
1381 1457 3.652057 TTAGAGGAGGCCAAAATCAGG 57.348 47.619 5.01 0.00 0.00 3.86
1382 1458 4.785301 TGATTAGAGGAGGCCAAAATCAG 58.215 43.478 5.01 0.00 30.49 2.90
1383 1459 4.860802 TGATTAGAGGAGGCCAAAATCA 57.139 40.909 5.01 7.83 31.03 2.57
1384 1460 5.136105 ACATGATTAGAGGAGGCCAAAATC 58.864 41.667 5.01 5.24 0.00 2.17
1385 1461 5.134725 ACATGATTAGAGGAGGCCAAAAT 57.865 39.130 5.01 0.00 0.00 1.82
1442 1577 2.246719 AGGGCAGAGTAAATCGCATC 57.753 50.000 0.00 0.00 31.66 3.91
1523 1658 2.174107 CATCAACACACGCAGCCG 59.826 61.111 0.00 0.00 41.14 5.52
1619 1756 6.491745 AGATCTTGACAAGGATCGCTAGATAA 59.508 38.462 15.13 0.00 42.02 1.75
1683 1989 1.543607 TTGCGGCATTCATGAGGAAA 58.456 45.000 2.28 0.00 39.39 3.13
1687 1993 1.205657 GCAATTGCGGCATTCATGAG 58.794 50.000 15.87 0.00 0.00 2.90
1689 1995 0.648441 GTGCAATTGCGGCATTCATG 59.352 50.000 24.58 2.02 44.11 3.07
1694 2000 1.581727 TACACGTGCAATTGCGGCAT 61.582 50.000 24.58 11.79 44.11 4.40
1699 2005 1.394917 CCTCTCTACACGTGCAATTGC 59.605 52.381 23.69 23.69 42.50 3.56
1701 2007 2.563179 ACTCCTCTCTACACGTGCAATT 59.437 45.455 17.22 0.00 0.00 2.32
1784 2091 5.995897 AGGTGAAAATTAGTAAAGCACGACT 59.004 36.000 0.00 0.00 0.00 4.18
1806 2113 1.056660 ACTAACTGGTCACCCACAGG 58.943 55.000 0.00 0.00 39.00 4.00
1859 2166 4.713792 ATGGACCTAGGATTTGATGGTC 57.286 45.455 17.98 0.00 44.51 4.02
1936 2243 7.226523 GCAATCCTTCATTTTGTACTTGGTTTT 59.773 33.333 0.00 0.00 0.00 2.43
1962 2269 7.827819 TGGTCTATCAAATTTAACAGAGACG 57.172 36.000 10.37 0.00 34.27 4.18
2004 2447 1.202651 AGTGTCTTGTTGAGGAACCCG 60.203 52.381 0.00 0.00 0.00 5.28
2006 2449 2.158813 TGGAGTGTCTTGTTGAGGAACC 60.159 50.000 0.00 0.00 0.00 3.62
2007 2450 2.872858 GTGGAGTGTCTTGTTGAGGAAC 59.127 50.000 0.00 0.00 0.00 3.62
2128 2572 4.510038 ACATTCAGGAAACATCAAGCAC 57.490 40.909 0.00 0.00 0.00 4.40
2143 2587 8.661257 CGAACATAGGTACAACATTTACATTCA 58.339 33.333 0.00 0.00 0.00 2.57
2144 2588 8.662141 ACGAACATAGGTACAACATTTACATTC 58.338 33.333 0.00 0.00 0.00 2.67
2145 2589 8.556213 ACGAACATAGGTACAACATTTACATT 57.444 30.769 0.00 0.00 0.00 2.71
2210 2654 6.176975 TCAAGTAGTTTGCCATAACAATCG 57.823 37.500 0.00 0.00 36.70 3.34
2231 2677 8.578448 TCAATACATTCTGGAAACATCAATCA 57.422 30.769 0.00 0.00 41.51 2.57
2233 2679 7.970061 CGTTCAATACATTCTGGAAACATCAAT 59.030 33.333 0.00 0.00 41.51 2.57
2290 2740 2.823196 TTAATGCGGCATGAAACTCG 57.177 45.000 17.43 0.00 0.00 4.18
2306 2756 7.458397 TCTGAAGAGAATTACCAGCCTTTTAA 58.542 34.615 0.00 0.00 0.00 1.52
2328 2779 6.309494 CACCACAAAGTTGCATGATTTATCTG 59.691 38.462 0.00 0.00 0.00 2.90
2397 2852 5.767665 TCATATCTGAGAGAGGACTAACAGC 59.232 44.000 0.00 0.00 33.15 4.40
2404 2859 4.527816 AGGCAATCATATCTGAGAGAGGAC 59.472 45.833 0.00 0.00 34.12 3.85
2405 2860 4.749820 AGGCAATCATATCTGAGAGAGGA 58.250 43.478 0.00 0.00 34.12 3.71
2484 2939 3.708631 CCCCATGAGATAGCTCCGATAAT 59.291 47.826 5.36 0.00 40.55 1.28
2495 2950 1.134007 CACAGCAAGCCCCATGAGATA 60.134 52.381 0.00 0.00 0.00 1.98
2603 3058 2.406002 AAATATACAGGCCGGCGGGG 62.406 60.000 29.48 14.82 39.58 5.73
2730 3186 4.160439 TGCGGATTCTGTCTAGTCAAGAAT 59.840 41.667 13.50 13.50 35.47 2.40
2918 3378 7.946381 AAGAAGAAGAAGAGGAAAACAAACT 57.054 32.000 0.00 0.00 0.00 2.66
2938 3398 6.820656 TGCAAGCACCATTAAAAGAAAAAGAA 59.179 30.769 0.00 0.00 0.00 2.52
2940 3400 6.601741 TGCAAGCACCATTAAAAGAAAAAG 57.398 33.333 0.00 0.00 0.00 2.27
2980 3440 2.504274 GGGGCGGTCGGATACATCA 61.504 63.158 0.00 0.00 0.00 3.07
3098 3558 2.289694 ACTTCGATCCAGGAACCAACTG 60.290 50.000 0.00 0.00 35.74 3.16
3099 3559 1.978580 ACTTCGATCCAGGAACCAACT 59.021 47.619 0.00 0.00 0.00 3.16
3100 3560 2.474410 ACTTCGATCCAGGAACCAAC 57.526 50.000 0.00 0.00 0.00 3.77
3144 3614 4.763279 TGATTTGTGCAGACATGATTCTGT 59.237 37.500 13.23 0.00 44.34 3.41
3151 3621 7.355332 TCGATATATGATTTGTGCAGACATG 57.645 36.000 0.00 0.00 30.13 3.21
3152 3622 6.091849 GCTCGATATATGATTTGTGCAGACAT 59.908 38.462 0.00 0.00 30.13 3.06
3154 3624 5.406477 TGCTCGATATATGATTTGTGCAGAC 59.594 40.000 0.00 0.00 0.00 3.51
3201 3671 4.367450 TGCAAAAGATTACAGGCACAAAC 58.633 39.130 0.00 0.00 0.00 2.93
3237 3707 6.660521 TGAACATAATTGCCAGATCCCATATC 59.339 38.462 0.00 0.00 0.00 1.63
3241 3711 4.079844 TCTGAACATAATTGCCAGATCCCA 60.080 41.667 0.00 0.00 33.55 4.37
3242 3712 4.464008 TCTGAACATAATTGCCAGATCCC 58.536 43.478 0.00 0.00 33.55 3.85
3245 3715 5.241064 GCATCTCTGAACATAATTGCCAGAT 59.759 40.000 0.00 0.00 36.15 2.90
3246 3716 4.577693 GCATCTCTGAACATAATTGCCAGA 59.422 41.667 0.00 0.00 35.70 3.86
3247 3717 4.337274 TGCATCTCTGAACATAATTGCCAG 59.663 41.667 0.00 0.00 0.00 4.85
3249 3719 4.906065 TGCATCTCTGAACATAATTGCC 57.094 40.909 0.00 0.00 0.00 4.52
3251 3721 8.975410 TTCTTTTGCATCTCTGAACATAATTG 57.025 30.769 0.00 0.00 0.00 2.32
3252 3722 9.985730 TTTTCTTTTGCATCTCTGAACATAATT 57.014 25.926 0.00 0.00 0.00 1.40
3253 3723 9.415544 GTTTTCTTTTGCATCTCTGAACATAAT 57.584 29.630 0.00 0.00 0.00 1.28
3260 3780 7.490840 TGAATTGTTTTCTTTTGCATCTCTGA 58.509 30.769 0.00 0.00 0.00 3.27
3267 3787 5.816258 TGCATCTGAATTGTTTTCTTTTGCA 59.184 32.000 0.00 0.00 33.28 4.08
3268 3788 6.289745 TGCATCTGAATTGTTTTCTTTTGC 57.710 33.333 0.00 0.00 0.00 3.68
3269 3789 7.912383 AGTTGCATCTGAATTGTTTTCTTTTG 58.088 30.769 0.00 0.00 0.00 2.44
3270 3790 8.496707 AAGTTGCATCTGAATTGTTTTCTTTT 57.503 26.923 0.00 0.00 0.00 2.27
3272 3792 9.768662 AATAAGTTGCATCTGAATTGTTTTCTT 57.231 25.926 0.00 0.00 0.00 2.52
3273 3793 9.768662 AAATAAGTTGCATCTGAATTGTTTTCT 57.231 25.926 0.00 0.00 0.00 2.52
3274 3794 9.801714 CAAATAAGTTGCATCTGAATTGTTTTC 57.198 29.630 0.00 0.00 0.00 2.29
3290 3814 5.712152 AGGAAGGACTTGCAAATAAGTTG 57.288 39.130 0.00 0.00 40.78 3.16
3293 3817 4.943705 TGCTAGGAAGGACTTGCAAATAAG 59.056 41.667 0.00 0.00 44.06 1.73
3295 3819 4.568072 TGCTAGGAAGGACTTGCAAATA 57.432 40.909 0.00 0.00 44.06 1.40
3304 3828 5.063880 TCAAGTTTCTTTGCTAGGAAGGAC 58.936 41.667 8.35 0.00 0.00 3.85
3305 3829 5.304686 TCAAGTTTCTTTGCTAGGAAGGA 57.695 39.130 4.62 4.62 0.00 3.36
3306 3830 5.105997 CCATCAAGTTTCTTTGCTAGGAAGG 60.106 44.000 0.00 0.00 0.00 3.46
3307 3831 5.474876 ACCATCAAGTTTCTTTGCTAGGAAG 59.525 40.000 0.00 0.00 0.00 3.46
3312 3836 8.087750 CCAATTTACCATCAAGTTTCTTTGCTA 58.912 33.333 0.00 0.00 0.00 3.49
3314 3839 6.347644 GCCAATTTACCATCAAGTTTCTTTGC 60.348 38.462 0.00 0.00 0.00 3.68
3316 3841 6.825610 TGCCAATTTACCATCAAGTTTCTTT 58.174 32.000 0.00 0.00 0.00 2.52
3318 3843 6.418057 TTGCCAATTTACCATCAAGTTTCT 57.582 33.333 0.00 0.00 0.00 2.52
3319 3844 7.671495 AATTGCCAATTTACCATCAAGTTTC 57.329 32.000 0.00 0.00 0.00 2.78
3320 3845 9.165035 CATAATTGCCAATTTACCATCAAGTTT 57.835 29.630 8.15 0.00 32.38 2.66
3322 3847 7.850193 ACATAATTGCCAATTTACCATCAAGT 58.150 30.769 8.15 0.00 32.38 3.16
3323 3848 8.721019 AACATAATTGCCAATTTACCATCAAG 57.279 30.769 8.15 0.00 32.38 3.02
3326 3851 8.196771 TCTGAACATAATTGCCAATTTACCATC 58.803 33.333 8.15 2.57 32.38 3.51
3331 3926 7.922278 GCATCTCTGAACATAATTGCCAATTTA 59.078 33.333 8.15 0.00 32.38 1.40
3368 3963 6.890814 AGCCTTGCTACTACTTACTCTAGAAA 59.109 38.462 0.00 0.00 36.99 2.52
3369 3964 6.424883 AGCCTTGCTACTACTTACTCTAGAA 58.575 40.000 0.00 0.00 36.99 2.10
3370 3965 6.003859 AGCCTTGCTACTACTTACTCTAGA 57.996 41.667 0.00 0.00 36.99 2.43
3371 3966 6.095720 ACAAGCCTTGCTACTACTTACTCTAG 59.904 42.308 3.88 0.00 38.25 2.43
3372 3967 5.950549 ACAAGCCTTGCTACTACTTACTCTA 59.049 40.000 3.88 0.00 38.25 2.43
3373 3968 4.773149 ACAAGCCTTGCTACTACTTACTCT 59.227 41.667 3.88 0.00 38.25 3.24
3374 3969 5.074584 ACAAGCCTTGCTACTACTTACTC 57.925 43.478 3.88 0.00 38.25 2.59
3375 3970 5.485209 AACAAGCCTTGCTACTACTTACT 57.515 39.130 3.88 0.00 38.25 2.24
3376 3971 6.628185 TCTAACAAGCCTTGCTACTACTTAC 58.372 40.000 3.88 0.00 38.25 2.34
3377 3972 6.845758 TCTAACAAGCCTTGCTACTACTTA 57.154 37.500 3.88 0.00 38.25 2.24
3378 3973 5.740290 TCTAACAAGCCTTGCTACTACTT 57.260 39.130 3.88 0.00 38.25 2.24
3379 3974 5.941555 ATCTAACAAGCCTTGCTACTACT 57.058 39.130 3.88 0.00 38.25 2.57
3380 3975 5.232414 CGAATCTAACAAGCCTTGCTACTAC 59.768 44.000 3.88 0.00 38.25 2.73
3381 3976 5.105473 ACGAATCTAACAAGCCTTGCTACTA 60.105 40.000 3.88 0.00 38.25 1.82
3382 3977 4.184629 CGAATCTAACAAGCCTTGCTACT 58.815 43.478 3.88 0.00 38.25 2.57
3383 3978 3.933332 ACGAATCTAACAAGCCTTGCTAC 59.067 43.478 3.88 0.00 38.25 3.58
3384 3979 4.202245 ACGAATCTAACAAGCCTTGCTA 57.798 40.909 3.88 0.00 38.25 3.49
3385 3980 3.059352 ACGAATCTAACAAGCCTTGCT 57.941 42.857 3.88 0.00 42.56 3.91
3386 3981 3.492313 CAACGAATCTAACAAGCCTTGC 58.508 45.455 3.88 0.00 0.00 4.01
3387 3982 3.058293 TGCAACGAATCTAACAAGCCTTG 60.058 43.478 2.11 2.11 0.00 3.61
3388 3983 3.146066 TGCAACGAATCTAACAAGCCTT 58.854 40.909 0.00 0.00 0.00 4.35
3389 3984 2.778299 TGCAACGAATCTAACAAGCCT 58.222 42.857 0.00 0.00 0.00 4.58
3390 3985 3.552604 TTGCAACGAATCTAACAAGCC 57.447 42.857 0.00 0.00 0.00 4.35
3391 3986 4.201523 GCATTTGCAACGAATCTAACAAGC 60.202 41.667 0.00 0.00 41.59 4.01
3392 3987 5.425941 GCATTTGCAACGAATCTAACAAG 57.574 39.130 0.00 0.00 41.59 3.16
3407 4002 3.863142 ACTTCCATCTCTTGCATTTGC 57.137 42.857 0.00 0.00 42.50 3.68
3408 4003 6.971184 GTCATAACTTCCATCTCTTGCATTTG 59.029 38.462 0.00 0.00 0.00 2.32
3409 4004 6.660521 TGTCATAACTTCCATCTCTTGCATTT 59.339 34.615 0.00 0.00 0.00 2.32
3410 4005 6.094603 GTGTCATAACTTCCATCTCTTGCATT 59.905 38.462 0.00 0.00 0.00 3.56
3411 4006 5.587844 GTGTCATAACTTCCATCTCTTGCAT 59.412 40.000 0.00 0.00 0.00 3.96
3412 4007 4.937620 GTGTCATAACTTCCATCTCTTGCA 59.062 41.667 0.00 0.00 0.00 4.08
3413 4008 5.064452 CAGTGTCATAACTTCCATCTCTTGC 59.936 44.000 0.00 0.00 0.00 4.01
3414 4009 5.583854 CCAGTGTCATAACTTCCATCTCTTG 59.416 44.000 0.00 0.00 0.00 3.02
3415 4010 5.485353 TCCAGTGTCATAACTTCCATCTCTT 59.515 40.000 0.00 0.00 0.00 2.85
3416 4011 5.026121 TCCAGTGTCATAACTTCCATCTCT 58.974 41.667 0.00 0.00 0.00 3.10
3417 4012 5.344743 TCCAGTGTCATAACTTCCATCTC 57.655 43.478 0.00 0.00 0.00 2.75
3418 4013 5.190528 ACATCCAGTGTCATAACTTCCATCT 59.809 40.000 0.00 0.00 35.77 2.90
3419 4014 5.295292 CACATCCAGTGTCATAACTTCCATC 59.705 44.000 0.00 0.00 43.40 3.51
3420 4015 5.188434 CACATCCAGTGTCATAACTTCCAT 58.812 41.667 0.00 0.00 43.40 3.41
3421 4016 4.578871 CACATCCAGTGTCATAACTTCCA 58.421 43.478 0.00 0.00 43.40 3.53
3434 4029 1.133823 TGTGAAAGCACCACATCCAGT 60.134 47.619 0.00 0.00 44.51 4.00
3435 4030 1.538512 CTGTGAAAGCACCACATCCAG 59.461 52.381 6.35 0.00 44.51 3.86
3436 4031 1.142667 TCTGTGAAAGCACCACATCCA 59.857 47.619 6.35 0.00 44.51 3.41
3437 4032 1.896220 TCTGTGAAAGCACCACATCC 58.104 50.000 6.35 0.00 44.51 3.51
3438 4033 3.503363 TGATTCTGTGAAAGCACCACATC 59.497 43.478 6.35 3.40 44.51 3.06
3439 4034 3.489355 TGATTCTGTGAAAGCACCACAT 58.511 40.909 6.35 0.00 44.51 3.21
3440 4035 2.929641 TGATTCTGTGAAAGCACCACA 58.070 42.857 5.86 5.86 44.51 4.17
3441 4036 3.254166 ACATGATTCTGTGAAAGCACCAC 59.746 43.478 0.00 0.00 44.51 4.16
3442 4037 3.489355 ACATGATTCTGTGAAAGCACCA 58.511 40.909 0.00 0.00 44.51 4.17
3443 4038 3.755378 AGACATGATTCTGTGAAAGCACC 59.245 43.478 0.00 0.00 44.51 5.01
3444 4039 4.720090 CAGACATGATTCTGTGAAAGCAC 58.280 43.478 0.00 0.00 45.35 4.40
3445 4040 3.189910 GCAGACATGATTCTGTGAAAGCA 59.810 43.478 13.23 0.00 44.34 3.91
3446 4041 3.189910 TGCAGACATGATTCTGTGAAAGC 59.810 43.478 13.23 1.13 44.34 3.51
3447 4042 4.214758 TGTGCAGACATGATTCTGTGAAAG 59.785 41.667 13.23 0.00 44.34 2.62
3448 4043 4.136051 TGTGCAGACATGATTCTGTGAAA 58.864 39.130 13.23 0.00 44.34 2.69
3449 4044 3.742385 TGTGCAGACATGATTCTGTGAA 58.258 40.909 13.23 0.24 44.34 3.18
3450 4045 3.405823 TGTGCAGACATGATTCTGTGA 57.594 42.857 13.23 0.78 44.34 3.58
3451 4046 4.492791 TTTGTGCAGACATGATTCTGTG 57.507 40.909 13.23 0.00 44.34 3.66
3452 4047 4.763279 TGATTTGTGCAGACATGATTCTGT 59.237 37.500 13.23 0.00 44.34 3.41
3453 4048 5.305139 TGATTTGTGCAGACATGATTCTG 57.695 39.130 0.00 4.12 45.15 3.02
3454 4049 7.818997 ATATGATTTGTGCAGACATGATTCT 57.181 32.000 0.00 0.00 30.13 2.40
3455 4050 9.770503 GATATATGATTTGTGCAGACATGATTC 57.229 33.333 0.00 0.00 30.13 2.52
3456 4051 8.448615 CGATATATGATTTGTGCAGACATGATT 58.551 33.333 0.00 0.00 30.13 2.57
3457 4052 7.820872 TCGATATATGATTTGTGCAGACATGAT 59.179 33.333 0.00 0.00 30.13 2.45
3458 4053 7.153985 TCGATATATGATTTGTGCAGACATGA 58.846 34.615 0.00 0.00 30.13 3.07
3459 4054 7.355332 TCGATATATGATTTGTGCAGACATG 57.645 36.000 0.00 0.00 30.13 3.21
3460 4055 6.091849 GCTCGATATATGATTTGTGCAGACAT 59.908 38.462 0.00 0.00 30.13 3.06
3461 4056 5.406477 GCTCGATATATGATTTGTGCAGACA 59.594 40.000 0.00 0.00 0.00 3.41
3462 4057 5.406477 TGCTCGATATATGATTTGTGCAGAC 59.594 40.000 0.00 0.00 0.00 3.51
3463 4058 5.406477 GTGCTCGATATATGATTTGTGCAGA 59.594 40.000 0.00 0.00 0.00 4.26
3464 4059 5.407691 AGTGCTCGATATATGATTTGTGCAG 59.592 40.000 0.00 0.00 0.00 4.41
3465 4060 5.178067 CAGTGCTCGATATATGATTTGTGCA 59.822 40.000 0.00 0.00 0.00 4.57
3466 4061 5.178252 ACAGTGCTCGATATATGATTTGTGC 59.822 40.000 0.00 0.00 0.00 4.57
3467 4062 6.775939 ACAGTGCTCGATATATGATTTGTG 57.224 37.500 0.00 0.00 0.00 3.33
3468 4063 7.596621 CACTACAGTGCTCGATATATGATTTGT 59.403 37.037 0.00 0.00 39.39 2.83
3469 4064 7.947090 CACTACAGTGCTCGATATATGATTTG 58.053 38.462 0.00 0.00 39.39 2.32
3486 4081 3.584848 AGGAATTTCAGGAGCACTACAGT 59.415 43.478 0.00 0.00 0.00 3.55
3487 4082 3.937706 CAGGAATTTCAGGAGCACTACAG 59.062 47.826 0.00 0.00 0.00 2.74
3488 4083 3.327757 ACAGGAATTTCAGGAGCACTACA 59.672 43.478 0.00 0.00 0.00 2.74
3489 4084 3.944087 ACAGGAATTTCAGGAGCACTAC 58.056 45.455 0.00 0.00 0.00 2.73
3490 4085 4.640771 AACAGGAATTTCAGGAGCACTA 57.359 40.909 0.00 0.00 0.00 2.74
3491 4086 3.515602 AACAGGAATTTCAGGAGCACT 57.484 42.857 0.00 0.00 0.00 4.40
3492 4087 3.319122 ACAAACAGGAATTTCAGGAGCAC 59.681 43.478 0.00 0.00 0.00 4.40
3493 4088 3.318839 CACAAACAGGAATTTCAGGAGCA 59.681 43.478 0.00 0.00 0.00 4.26
3494 4089 3.858503 GCACAAACAGGAATTTCAGGAGC 60.859 47.826 0.00 0.00 0.00 4.70
3495 4090 3.305608 GGCACAAACAGGAATTTCAGGAG 60.306 47.826 0.00 0.00 0.00 3.69
3496 4091 2.627699 GGCACAAACAGGAATTTCAGGA 59.372 45.455 0.00 0.00 0.00 3.86
3497 4092 2.629617 AGGCACAAACAGGAATTTCAGG 59.370 45.455 0.00 0.00 0.00 3.86
3498 4093 3.068590 ACAGGCACAAACAGGAATTTCAG 59.931 43.478 0.00 0.00 0.00 3.02
3499 4094 3.030291 ACAGGCACAAACAGGAATTTCA 58.970 40.909 0.00 0.00 0.00 2.69
3500 4095 3.733443 ACAGGCACAAACAGGAATTTC 57.267 42.857 0.00 0.00 0.00 2.17
3501 4096 5.539955 AGATTACAGGCACAAACAGGAATTT 59.460 36.000 0.00 0.00 0.00 1.82
3502 4097 5.079643 AGATTACAGGCACAAACAGGAATT 58.920 37.500 0.00 0.00 0.00 2.17
3503 4098 4.666512 AGATTACAGGCACAAACAGGAAT 58.333 39.130 0.00 0.00 0.00 3.01
3504 4099 4.098914 AGATTACAGGCACAAACAGGAA 57.901 40.909 0.00 0.00 0.00 3.36
3505 4100 3.788227 AGATTACAGGCACAAACAGGA 57.212 42.857 0.00 0.00 0.00 3.86
3506 4101 4.853924 AAAGATTACAGGCACAAACAGG 57.146 40.909 0.00 0.00 0.00 4.00
3507 4102 4.445385 GCAAAAGATTACAGGCACAAACAG 59.555 41.667 0.00 0.00 0.00 3.16
3508 4103 4.142071 TGCAAAAGATTACAGGCACAAACA 60.142 37.500 0.00 0.00 0.00 2.83
3509 4104 4.367450 TGCAAAAGATTACAGGCACAAAC 58.633 39.130 0.00 0.00 0.00 2.93
3510 4105 4.662468 TGCAAAAGATTACAGGCACAAA 57.338 36.364 0.00 0.00 0.00 2.83
3511 4106 4.142071 TGTTGCAAAAGATTACAGGCACAA 60.142 37.500 0.00 0.00 0.00 3.33
3512 4107 3.382865 TGTTGCAAAAGATTACAGGCACA 59.617 39.130 0.00 0.00 0.00 4.57
3513 4108 3.976169 TGTTGCAAAAGATTACAGGCAC 58.024 40.909 0.00 0.00 0.00 5.01
3514 4109 4.870123 ATGTTGCAAAAGATTACAGGCA 57.130 36.364 0.00 0.00 0.00 4.75
3515 4110 6.817270 CATATGTTGCAAAAGATTACAGGC 57.183 37.500 0.00 0.00 0.00 4.85
3530 4125 4.763279 TCCCATATCAAGCAGCATATGTTG 59.237 41.667 14.66 14.66 32.95 3.33
3531 4126 4.989277 TCCCATATCAAGCAGCATATGTT 58.011 39.130 4.29 0.00 32.95 2.71
3532 4127 4.645863 TCCCATATCAAGCAGCATATGT 57.354 40.909 4.29 0.00 32.95 2.29
3533 4128 5.297029 CAGATCCCATATCAAGCAGCATATG 59.703 44.000 0.00 0.00 34.12 1.78
3534 4129 5.437946 CAGATCCCATATCAAGCAGCATAT 58.562 41.667 0.00 0.00 0.00 1.78
3535 4130 4.324022 CCAGATCCCATATCAAGCAGCATA 60.324 45.833 0.00 0.00 0.00 3.14
3536 4131 3.561528 CCAGATCCCATATCAAGCAGCAT 60.562 47.826 0.00 0.00 0.00 3.79
3537 4132 2.224695 CCAGATCCCATATCAAGCAGCA 60.225 50.000 0.00 0.00 0.00 4.41
3538 4133 2.434428 CCAGATCCCATATCAAGCAGC 58.566 52.381 0.00 0.00 0.00 5.25
3539 4134 2.224695 TGCCAGATCCCATATCAAGCAG 60.225 50.000 0.00 0.00 0.00 4.24
3540 4135 1.776063 TGCCAGATCCCATATCAAGCA 59.224 47.619 0.00 0.00 0.00 3.91
3541 4136 2.574006 TGCCAGATCCCATATCAAGC 57.426 50.000 0.00 0.00 0.00 4.01
3542 4137 6.662234 ACATAATTGCCAGATCCCATATCAAG 59.338 38.462 0.00 0.00 0.00 3.02
3543 4138 6.554784 ACATAATTGCCAGATCCCATATCAA 58.445 36.000 0.00 0.00 0.00 2.57
3544 4139 6.143551 ACATAATTGCCAGATCCCATATCA 57.856 37.500 0.00 0.00 0.00 2.15
3545 4140 6.660521 TGAACATAATTGCCAGATCCCATATC 59.339 38.462 0.00 0.00 0.00 1.63
3546 4141 6.554784 TGAACATAATTGCCAGATCCCATAT 58.445 36.000 0.00 0.00 0.00 1.78
3547 4142 5.951204 TGAACATAATTGCCAGATCCCATA 58.049 37.500 0.00 0.00 0.00 2.74
3548 4143 4.806892 TGAACATAATTGCCAGATCCCAT 58.193 39.130 0.00 0.00 0.00 4.00
3549 4144 4.079844 TCTGAACATAATTGCCAGATCCCA 60.080 41.667 0.00 0.00 33.55 4.37
3550 4145 4.464008 TCTGAACATAATTGCCAGATCCC 58.536 43.478 0.00 0.00 33.55 3.85
3551 4146 5.371526 TCTCTGAACATAATTGCCAGATCC 58.628 41.667 0.00 0.00 36.15 3.36
3552 4147 6.568081 GCATCTCTGAACATAATTGCCAGATC 60.568 42.308 0.00 0.00 36.15 2.75
3553 4148 5.241064 GCATCTCTGAACATAATTGCCAGAT 59.759 40.000 0.00 0.00 36.15 2.90
3554 4149 4.577693 GCATCTCTGAACATAATTGCCAGA 59.422 41.667 0.00 0.00 35.70 3.86
3555 4150 4.337274 TGCATCTCTGAACATAATTGCCAG 59.663 41.667 0.00 0.00 0.00 4.85
3556 4151 4.271661 TGCATCTCTGAACATAATTGCCA 58.728 39.130 0.00 0.00 0.00 4.92
3557 4152 4.906065 TGCATCTCTGAACATAATTGCC 57.094 40.909 0.00 0.00 0.00 4.52
3558 4153 7.031372 TCTTTTGCATCTCTGAACATAATTGC 58.969 34.615 0.00 0.00 0.00 3.56
3559 4154 8.975410 TTCTTTTGCATCTCTGAACATAATTG 57.025 30.769 0.00 0.00 0.00 2.32
3560 4155 9.985730 TTTTCTTTTGCATCTCTGAACATAATT 57.014 25.926 0.00 0.00 0.00 1.40
3561 4156 9.415544 GTTTTCTTTTGCATCTCTGAACATAAT 57.584 29.630 0.00 0.00 0.00 1.28
3562 4157 8.412456 TGTTTTCTTTTGCATCTCTGAACATAA 58.588 29.630 0.00 0.00 0.00 1.90
3563 4158 7.939782 TGTTTTCTTTTGCATCTCTGAACATA 58.060 30.769 0.00 0.00 0.00 2.29
3564 4159 6.808829 TGTTTTCTTTTGCATCTCTGAACAT 58.191 32.000 0.00 0.00 0.00 2.71
3565 4160 6.206395 TGTTTTCTTTTGCATCTCTGAACA 57.794 33.333 0.00 0.00 0.00 3.18
3566 4161 7.704789 ATTGTTTTCTTTTGCATCTCTGAAC 57.295 32.000 0.00 0.00 0.00 3.18
3567 4162 7.980662 TGAATTGTTTTCTTTTGCATCTCTGAA 59.019 29.630 0.00 0.00 0.00 3.02
3568 4163 7.490840 TGAATTGTTTTCTTTTGCATCTCTGA 58.509 30.769 0.00 0.00 0.00 3.27
3569 4164 7.650504 TCTGAATTGTTTTCTTTTGCATCTCTG 59.349 33.333 0.00 0.00 0.00 3.35
3570 4165 7.719483 TCTGAATTGTTTTCTTTTGCATCTCT 58.281 30.769 0.00 0.00 0.00 3.10
3571 4166 7.935338 TCTGAATTGTTTTCTTTTGCATCTC 57.065 32.000 0.00 0.00 0.00 2.75
3572 4167 7.095355 GCATCTGAATTGTTTTCTTTTGCATCT 60.095 33.333 0.00 0.00 0.00 2.90
3573 4168 7.013529 GCATCTGAATTGTTTTCTTTTGCATC 58.986 34.615 0.00 0.00 0.00 3.91
3574 4169 6.483974 TGCATCTGAATTGTTTTCTTTTGCAT 59.516 30.769 0.00 0.00 30.98 3.96
3575 4170 5.816258 TGCATCTGAATTGTTTTCTTTTGCA 59.184 32.000 0.00 0.00 33.28 4.08
3576 4171 6.289745 TGCATCTGAATTGTTTTCTTTTGC 57.710 33.333 0.00 0.00 0.00 3.68
3577 4172 7.912383 AGTTGCATCTGAATTGTTTTCTTTTG 58.088 30.769 0.00 0.00 0.00 2.44
3578 4173 8.496707 AAGTTGCATCTGAATTGTTTTCTTTT 57.503 26.923 0.00 0.00 0.00 2.27
3579 4174 9.768662 ATAAGTTGCATCTGAATTGTTTTCTTT 57.231 25.926 0.00 0.00 0.00 2.52
3580 4175 9.768662 AATAAGTTGCATCTGAATTGTTTTCTT 57.231 25.926 0.00 0.00 0.00 2.52
3581 4176 9.768662 AAATAAGTTGCATCTGAATTGTTTTCT 57.231 25.926 0.00 0.00 0.00 2.52
3582 4177 9.801714 CAAATAAGTTGCATCTGAATTGTTTTC 57.198 29.630 0.00 0.00 0.00 2.29
3604 4199 3.439857 TGCTAGGAAGGACTTGCAAAT 57.560 42.857 0.00 0.00 44.06 2.32
3618 4213 6.817765 TTACCATCAAGTTTCTTTGCTAGG 57.182 37.500 0.00 0.00 0.00 3.02
3639 4234 7.922278 GCATCTCTGAACATAATTGCCAATTTA 59.078 33.333 8.15 0.00 32.38 1.40
3640 4235 6.759827 GCATCTCTGAACATAATTGCCAATTT 59.240 34.615 8.15 0.00 32.38 1.82
3676 4617 6.890814 AGCCTTGCTACTACTTACTCTAGAAA 59.109 38.462 0.00 0.00 36.99 2.52
3677 4618 6.424883 AGCCTTGCTACTACTTACTCTAGAA 58.575 40.000 0.00 0.00 36.99 2.10
3678 4619 6.003859 AGCCTTGCTACTACTTACTCTAGA 57.996 41.667 0.00 0.00 36.99 2.43
3679 4620 6.095720 ACAAGCCTTGCTACTACTTACTCTAG 59.904 42.308 3.88 0.00 38.25 2.43
3680 4621 5.950549 ACAAGCCTTGCTACTACTTACTCTA 59.049 40.000 3.88 0.00 38.25 2.43
3681 4622 4.773149 ACAAGCCTTGCTACTACTTACTCT 59.227 41.667 3.88 0.00 38.25 3.24
3682 4623 5.074584 ACAAGCCTTGCTACTACTTACTC 57.925 43.478 3.88 0.00 38.25 2.59
3683 4624 5.485209 AACAAGCCTTGCTACTACTTACT 57.515 39.130 3.88 0.00 38.25 2.24
3684 4625 6.628185 TCTAACAAGCCTTGCTACTACTTAC 58.372 40.000 3.88 0.00 38.25 2.34
3685 4626 6.845758 TCTAACAAGCCTTGCTACTACTTA 57.154 37.500 3.88 0.00 38.25 2.24
3686 4627 5.740290 TCTAACAAGCCTTGCTACTACTT 57.260 39.130 3.88 0.00 38.25 2.24
3687 4628 5.941555 ATCTAACAAGCCTTGCTACTACT 57.058 39.130 3.88 0.00 38.25 2.57
3688 4629 5.232414 CGAATCTAACAAGCCTTGCTACTAC 59.768 44.000 3.88 0.00 38.25 2.73
3689 4630 5.105473 ACGAATCTAACAAGCCTTGCTACTA 60.105 40.000 3.88 0.00 38.25 1.82
3690 4631 4.184629 CGAATCTAACAAGCCTTGCTACT 58.815 43.478 3.88 0.00 38.25 2.57
3691 4632 3.933332 ACGAATCTAACAAGCCTTGCTAC 59.067 43.478 3.88 0.00 38.25 3.58
3692 4633 4.202245 ACGAATCTAACAAGCCTTGCTA 57.798 40.909 3.88 0.00 38.25 3.49
3693 4634 3.059352 ACGAATCTAACAAGCCTTGCT 57.941 42.857 3.88 0.00 42.56 3.91
3694 4635 3.492313 CAACGAATCTAACAAGCCTTGC 58.508 45.455 3.88 0.00 0.00 4.01
3695 4636 3.058293 TGCAACGAATCTAACAAGCCTTG 60.058 43.478 2.11 2.11 0.00 3.61
3696 4637 3.146066 TGCAACGAATCTAACAAGCCTT 58.854 40.909 0.00 0.00 0.00 4.35
3697 4638 2.778299 TGCAACGAATCTAACAAGCCT 58.222 42.857 0.00 0.00 0.00 4.58
3698 4639 3.552604 TTGCAACGAATCTAACAAGCC 57.447 42.857 0.00 0.00 0.00 4.35
3699 4640 4.201523 GCATTTGCAACGAATCTAACAAGC 60.202 41.667 0.00 0.00 41.59 4.01
3700 4641 5.425941 GCATTTGCAACGAATCTAACAAG 57.574 39.130 0.00 0.00 41.59 3.16
3739 4680 2.280186 CCCTACCTGGCGCGATTC 60.280 66.667 12.10 0.00 0.00 2.52
3818 4762 0.035152 TACCTGGCAGGCAAGACATG 60.035 55.000 33.04 6.76 39.63 3.21
3822 4767 0.698238 ATTGTACCTGGCAGGCAAGA 59.302 50.000 33.04 17.32 39.63 3.02
3828 4773 5.010012 GGAATATGGAAATTGTACCTGGCAG 59.990 44.000 7.75 7.75 0.00 4.85
3831 4776 7.518188 AGTAGGAATATGGAAATTGTACCTGG 58.482 38.462 0.00 0.00 0.00 4.45
3832 4777 8.980481 AAGTAGGAATATGGAAATTGTACCTG 57.020 34.615 0.00 0.00 0.00 4.00
3844 4789 9.667107 TTCACAGTAAGAAAAGTAGGAATATGG 57.333 33.333 0.00 0.00 0.00 2.74
3854 4799 3.467803 AGCGCTTCACAGTAAGAAAAGT 58.532 40.909 2.64 0.00 0.00 2.66
3855 4800 4.474226 AAGCGCTTCACAGTAAGAAAAG 57.526 40.909 18.98 0.00 0.00 2.27
3883 4828 2.277084 CTCATAACCTGTACCGGCAAC 58.723 52.381 0.00 0.00 0.00 4.17
3896 4841 6.481954 AAACGAAACAGACATCCTCATAAC 57.518 37.500 0.00 0.00 0.00 1.89
3918 4863 0.398381 AGCTGCCACCAAGGGAAAAA 60.398 50.000 0.00 0.00 37.23 1.94
3921 4866 2.005606 TTCAGCTGCCACCAAGGGAA 62.006 55.000 9.47 0.00 37.23 3.97
3961 4913 3.550820 TCTACAAGCTTTTTGACCTGCA 58.449 40.909 0.00 0.00 0.00 4.41
3962 4914 3.565902 ACTCTACAAGCTTTTTGACCTGC 59.434 43.478 0.00 0.00 0.00 4.85
3963 4915 4.576463 ACACTCTACAAGCTTTTTGACCTG 59.424 41.667 0.00 0.00 0.00 4.00
3964 4916 4.781934 ACACTCTACAAGCTTTTTGACCT 58.218 39.130 0.00 0.00 0.00 3.85
3965 4917 5.500645 AACACTCTACAAGCTTTTTGACC 57.499 39.130 0.00 0.00 0.00 4.02
3966 4918 7.011109 TGAGTAACACTCTACAAGCTTTTTGAC 59.989 37.037 0.00 0.00 45.27 3.18
3967 4919 7.045416 TGAGTAACACTCTACAAGCTTTTTGA 58.955 34.615 0.00 0.00 45.27 2.69
3968 4920 7.246674 TGAGTAACACTCTACAAGCTTTTTG 57.753 36.000 0.00 0.00 45.27 2.44
3969 4921 7.694886 GTTGAGTAACACTCTACAAGCTTTTT 58.305 34.615 13.58 0.00 45.75 1.94
3970 4922 7.247929 GTTGAGTAACACTCTACAAGCTTTT 57.752 36.000 13.58 0.00 45.75 2.27
3971 4923 6.846325 GTTGAGTAACACTCTACAAGCTTT 57.154 37.500 13.58 0.00 45.75 3.51
3978 4930 6.718454 TCTACGAGTTGAGTAACACTCTAC 57.282 41.667 11.38 11.38 46.44 2.59
3979 4931 7.918536 ATTCTACGAGTTGAGTAACACTCTA 57.081 36.000 7.75 0.00 45.27 2.43
3980 4932 6.821031 ATTCTACGAGTTGAGTAACACTCT 57.179 37.500 7.75 0.00 45.27 3.24
3981 4933 8.019669 TGTAATTCTACGAGTTGAGTAACACTC 58.980 37.037 0.00 0.00 45.26 3.51
3982 4934 7.879070 TGTAATTCTACGAGTTGAGTAACACT 58.121 34.615 0.00 0.00 39.30 3.55
3983 4935 8.511465 TTGTAATTCTACGAGTTGAGTAACAC 57.489 34.615 0.00 0.00 39.30 3.32
3984 4936 9.350357 GATTGTAATTCTACGAGTTGAGTAACA 57.650 33.333 0.00 0.00 39.30 2.41
3985 4937 9.350357 TGATTGTAATTCTACGAGTTGAGTAAC 57.650 33.333 0.00 0.00 37.06 2.50
3987 4939 9.731819 GATGATTGTAATTCTACGAGTTGAGTA 57.268 33.333 0.00 0.00 0.00 2.59
3988 4940 8.251026 TGATGATTGTAATTCTACGAGTTGAGT 58.749 33.333 0.00 0.00 0.00 3.41
3989 4941 8.634475 TGATGATTGTAATTCTACGAGTTGAG 57.366 34.615 0.00 0.00 0.00 3.02
3990 4942 8.869897 GTTGATGATTGTAATTCTACGAGTTGA 58.130 33.333 0.00 0.00 0.00 3.18
3991 4943 8.655970 TGTTGATGATTGTAATTCTACGAGTTG 58.344 33.333 0.00 0.00 0.00 3.16
3992 4944 8.771920 TGTTGATGATTGTAATTCTACGAGTT 57.228 30.769 0.00 0.00 0.00 3.01
3993 4945 8.035394 ACTGTTGATGATTGTAATTCTACGAGT 58.965 33.333 0.00 0.00 0.00 4.18
3994 4946 8.412608 ACTGTTGATGATTGTAATTCTACGAG 57.587 34.615 0.00 0.00 0.00 4.18
3995 4947 8.771920 AACTGTTGATGATTGTAATTCTACGA 57.228 30.769 0.00 0.00 0.00 3.43
3997 4949 9.922305 GCTAACTGTTGATGATTGTAATTCTAC 57.078 33.333 2.69 0.00 0.00 2.59
3998 4950 9.890629 AGCTAACTGTTGATGATTGTAATTCTA 57.109 29.630 2.69 0.00 0.00 2.10
3999 4951 8.671921 CAGCTAACTGTTGATGATTGTAATTCT 58.328 33.333 2.69 0.00 39.22 2.40
4000 4952 7.912250 CCAGCTAACTGTTGATGATTGTAATTC 59.088 37.037 2.69 0.00 42.81 2.17
4001 4953 7.611467 TCCAGCTAACTGTTGATGATTGTAATT 59.389 33.333 2.69 0.00 42.81 1.40
4002 4954 7.066284 GTCCAGCTAACTGTTGATGATTGTAAT 59.934 37.037 2.69 0.00 42.81 1.89
4003 4955 6.371548 GTCCAGCTAACTGTTGATGATTGTAA 59.628 38.462 2.69 0.00 42.81 2.41
4004 4956 5.874810 GTCCAGCTAACTGTTGATGATTGTA 59.125 40.000 2.69 0.00 42.81 2.41
4005 4957 4.697352 GTCCAGCTAACTGTTGATGATTGT 59.303 41.667 2.69 0.00 42.81 2.71
4006 4958 4.696877 TGTCCAGCTAACTGTTGATGATTG 59.303 41.667 2.69 0.00 42.81 2.67
4007 4959 4.910195 TGTCCAGCTAACTGTTGATGATT 58.090 39.130 2.69 0.00 42.81 2.57
4008 4960 4.019860 ACTGTCCAGCTAACTGTTGATGAT 60.020 41.667 2.69 0.00 42.81 2.45
4009 4961 3.324846 ACTGTCCAGCTAACTGTTGATGA 59.675 43.478 2.69 0.00 42.81 2.92
4010 4962 3.668447 ACTGTCCAGCTAACTGTTGATG 58.332 45.455 2.69 2.66 42.81 3.07
4011 4963 4.357918 AACTGTCCAGCTAACTGTTGAT 57.642 40.909 17.41 1.17 42.81 2.57
4012 4964 3.838244 AACTGTCCAGCTAACTGTTGA 57.162 42.857 17.41 0.00 42.81 3.18
4013 4965 3.251004 GGAAACTGTCCAGCTAACTGTTG 59.749 47.826 18.30 0.00 46.97 3.33
4014 4966 3.477530 GGAAACTGTCCAGCTAACTGTT 58.522 45.455 14.23 14.23 46.97 3.16
4015 4967 3.127425 GGAAACTGTCCAGCTAACTGT 57.873 47.619 5.45 5.45 46.97 3.55
4026 4978 1.971357 TCTGGTCCTGAGGAAACTGTC 59.029 52.381 0.96 0.00 44.43 3.51
4027 4979 2.103153 TCTGGTCCTGAGGAAACTGT 57.897 50.000 0.96 0.00 44.43 3.55
4028 4980 2.551071 GGTTCTGGTCCTGAGGAAACTG 60.551 54.545 0.96 3.86 44.43 3.16
4030 4982 1.271434 GGGTTCTGGTCCTGAGGAAAC 60.271 57.143 0.96 3.77 31.38 2.78
4031 4983 1.064825 GGGTTCTGGTCCTGAGGAAA 58.935 55.000 0.96 0.00 31.38 3.13
4032 4984 2.773458 GGGTTCTGGTCCTGAGGAA 58.227 57.895 0.96 0.00 31.38 3.36
4033 4985 4.561155 GGGTTCTGGTCCTGAGGA 57.439 61.111 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.