Multiple sequence alignment - TraesCS4A01G292400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G292400 chr4A 100.000 2482 0 0 1 2482 595215786 595218267 0.000000e+00 4584
1 TraesCS4A01G292400 chr4A 92.931 580 37 3 1 577 621665608 621666186 0.000000e+00 841
2 TraesCS4A01G292400 chr4A 91.595 583 45 2 1 579 32679864 32680446 0.000000e+00 802
3 TraesCS4A01G292400 chr4A 90.862 580 49 3 1 579 32097471 32096895 0.000000e+00 774
4 TraesCS4A01G292400 chr4A 82.745 255 14 13 2202 2443 738495540 738495777 1.510000e-47 200
5 TraesCS4A01G292400 chr4D 91.077 975 43 18 736 1682 8207692 8206734 0.000000e+00 1279
6 TraesCS4A01G292400 chr4D 91.830 306 22 3 1811 2115 440510348 440510045 8.210000e-115 424
7 TraesCS4A01G292400 chr4D 78.846 364 28 21 2113 2459 8205432 8205101 1.510000e-47 200
8 TraesCS4A01G292400 chr4B 84.340 1060 64 47 706 1684 15642166 15641128 0.000000e+00 944
9 TraesCS4A01G292400 chr4B 82.117 274 12 16 2194 2454 15640826 15640577 1.510000e-47 200
10 TraesCS4A01G292400 chr1A 92.228 579 44 1 1 579 504415417 504414840 0.000000e+00 819
11 TraesCS4A01G292400 chr1A 91.537 579 42 3 1 577 26597408 26596835 0.000000e+00 791
12 TraesCS4A01G292400 chr7A 91.537 579 46 2 1 577 595048860 595048283 0.000000e+00 795
13 TraesCS4A01G292400 chr7A 91.379 580 43 6 1 575 149851346 149851923 0.000000e+00 787
14 TraesCS4A01G292400 chr7A 90.554 307 26 3 1815 2120 523716724 523717028 1.070000e-108 403
15 TraesCS4A01G292400 chr6D 90.846 579 53 0 1 579 11039309 11038731 0.000000e+00 776
16 TraesCS4A01G292400 chr5A 90.598 585 43 7 1 577 306909808 306909228 0.000000e+00 765
17 TraesCS4A01G292400 chr5A 90.365 301 28 1 1815 2115 35987248 35986949 6.430000e-106 394
18 TraesCS4A01G292400 chr5D 91.776 304 21 4 1815 2115 139428706 139429008 1.060000e-113 420
19 TraesCS4A01G292400 chr5D 90.132 304 28 2 1813 2115 419976337 419976035 6.430000e-106 394
20 TraesCS4A01G292400 chr6A 91.667 300 24 1 1814 2113 308187936 308188234 4.940000e-112 414
21 TraesCS4A01G292400 chr2D 90.698 301 27 1 1815 2115 501303971 501303672 1.380000e-107 399
22 TraesCS4A01G292400 chr7D 90.397 302 25 4 1823 2122 578388153 578387854 6.430000e-106 394
23 TraesCS4A01G292400 chr7D 90.397 302 25 4 1823 2122 578421409 578421110 6.430000e-106 394


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G292400 chr4A 595215786 595218267 2481 False 4584.0 4584 100.0000 1 2482 1 chr4A.!!$F2 2481
1 TraesCS4A01G292400 chr4A 621665608 621666186 578 False 841.0 841 92.9310 1 577 1 chr4A.!!$F3 576
2 TraesCS4A01G292400 chr4A 32679864 32680446 582 False 802.0 802 91.5950 1 579 1 chr4A.!!$F1 578
3 TraesCS4A01G292400 chr4A 32096895 32097471 576 True 774.0 774 90.8620 1 579 1 chr4A.!!$R1 578
4 TraesCS4A01G292400 chr4D 8205101 8207692 2591 True 739.5 1279 84.9615 736 2459 2 chr4D.!!$R2 1723
5 TraesCS4A01G292400 chr4B 15640577 15642166 1589 True 572.0 944 83.2285 706 2454 2 chr4B.!!$R1 1748
6 TraesCS4A01G292400 chr1A 504414840 504415417 577 True 819.0 819 92.2280 1 579 1 chr1A.!!$R2 578
7 TraesCS4A01G292400 chr1A 26596835 26597408 573 True 791.0 791 91.5370 1 577 1 chr1A.!!$R1 576
8 TraesCS4A01G292400 chr7A 595048283 595048860 577 True 795.0 795 91.5370 1 577 1 chr7A.!!$R1 576
9 TraesCS4A01G292400 chr7A 149851346 149851923 577 False 787.0 787 91.3790 1 575 1 chr7A.!!$F1 574
10 TraesCS4A01G292400 chr6D 11038731 11039309 578 True 776.0 776 90.8460 1 579 1 chr6D.!!$R1 578
11 TraesCS4A01G292400 chr5A 306909228 306909808 580 True 765.0 765 90.5980 1 577 1 chr5A.!!$R2 576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
342 351 0.684805 AGGAGGACATCACCGAGACC 60.685 60.0 0.0 0.0 34.73 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1733 1924 0.03254 CAGGCAAAACTGCTGGTTCC 59.967 55.0 0.0 0.0 37.12 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 2.898738 CATCGTCTCAGGCTGGCT 59.101 61.111 15.73 0.00 0.00 4.75
195 204 1.686110 GGCGAAGAGGAGGGAGGAA 60.686 63.158 0.00 0.00 0.00 3.36
342 351 0.684805 AGGAGGACATCACCGAGACC 60.685 60.000 0.00 0.00 34.73 3.85
346 355 1.030488 GGACATCACCGAGACCGAGA 61.030 60.000 0.00 0.00 38.22 4.04
529 553 2.510012 GCTAACCCGGCACCGTAC 60.510 66.667 8.49 0.00 37.81 3.67
579 603 2.484417 CGGCTGTTGGAGATGCTCTTAT 60.484 50.000 0.00 0.00 0.00 1.73
580 604 3.137533 GGCTGTTGGAGATGCTCTTATC 58.862 50.000 0.00 0.00 0.00 1.75
581 605 3.432749 GGCTGTTGGAGATGCTCTTATCA 60.433 47.826 0.00 0.00 0.00 2.15
582 606 4.387598 GCTGTTGGAGATGCTCTTATCAT 58.612 43.478 0.00 0.00 0.00 2.45
583 607 4.820716 GCTGTTGGAGATGCTCTTATCATT 59.179 41.667 0.00 0.00 0.00 2.57
584 608 5.298777 GCTGTTGGAGATGCTCTTATCATTT 59.701 40.000 0.00 0.00 0.00 2.32
585 609 6.688637 TGTTGGAGATGCTCTTATCATTTG 57.311 37.500 0.00 0.00 0.00 2.32
586 610 5.591472 TGTTGGAGATGCTCTTATCATTTGG 59.409 40.000 0.00 0.00 0.00 3.28
587 611 4.722220 TGGAGATGCTCTTATCATTTGGG 58.278 43.478 0.00 0.00 0.00 4.12
588 612 4.166725 TGGAGATGCTCTTATCATTTGGGT 59.833 41.667 0.00 0.00 0.00 4.51
589 613 5.136105 GGAGATGCTCTTATCATTTGGGTT 58.864 41.667 0.00 0.00 0.00 4.11
590 614 5.595952 GGAGATGCTCTTATCATTTGGGTTT 59.404 40.000 0.00 0.00 0.00 3.27
591 615 6.772716 GGAGATGCTCTTATCATTTGGGTTTA 59.227 38.462 0.00 0.00 0.00 2.01
592 616 7.040823 GGAGATGCTCTTATCATTTGGGTTTAG 60.041 40.741 0.00 0.00 0.00 1.85
593 617 7.577303 AGATGCTCTTATCATTTGGGTTTAGA 58.423 34.615 0.00 0.00 0.00 2.10
594 618 8.055181 AGATGCTCTTATCATTTGGGTTTAGAA 58.945 33.333 0.00 0.00 0.00 2.10
595 619 7.630242 TGCTCTTATCATTTGGGTTTAGAAG 57.370 36.000 0.00 0.00 0.00 2.85
596 620 7.175104 TGCTCTTATCATTTGGGTTTAGAAGT 58.825 34.615 0.00 0.00 0.00 3.01
597 621 7.336931 TGCTCTTATCATTTGGGTTTAGAAGTC 59.663 37.037 0.00 0.00 0.00 3.01
598 622 7.201741 GCTCTTATCATTTGGGTTTAGAAGTCC 60.202 40.741 0.00 0.00 0.00 3.85
599 623 7.928873 TCTTATCATTTGGGTTTAGAAGTCCT 58.071 34.615 0.00 0.00 0.00 3.85
600 624 7.829211 TCTTATCATTTGGGTTTAGAAGTCCTG 59.171 37.037 0.00 0.00 0.00 3.86
601 625 5.319043 TCATTTGGGTTTAGAAGTCCTGT 57.681 39.130 0.00 0.00 0.00 4.00
602 626 5.070001 TCATTTGGGTTTAGAAGTCCTGTG 58.930 41.667 0.00 0.00 0.00 3.66
603 627 4.513406 TTTGGGTTTAGAAGTCCTGTGT 57.487 40.909 0.00 0.00 0.00 3.72
604 628 4.513406 TTGGGTTTAGAAGTCCTGTGTT 57.487 40.909 0.00 0.00 0.00 3.32
605 629 4.513406 TGGGTTTAGAAGTCCTGTGTTT 57.487 40.909 0.00 0.00 0.00 2.83
606 630 4.862371 TGGGTTTAGAAGTCCTGTGTTTT 58.138 39.130 0.00 0.00 0.00 2.43
607 631 5.265989 TGGGTTTAGAAGTCCTGTGTTTTT 58.734 37.500 0.00 0.00 0.00 1.94
628 652 7.465353 TTTTTCTATTCATGTGAATCAGGCA 57.535 32.000 11.24 0.00 43.17 4.75
629 653 6.441093 TTTCTATTCATGTGAATCAGGCAC 57.559 37.500 11.24 0.00 43.17 5.01
637 661 4.669206 TGTGAATCAGGCACACAATTTT 57.331 36.364 0.00 0.00 41.00 1.82
638 662 4.370049 TGTGAATCAGGCACACAATTTTG 58.630 39.130 0.00 0.00 41.00 2.44
639 663 3.184986 GTGAATCAGGCACACAATTTTGC 59.815 43.478 0.00 0.00 36.31 3.68
640 664 3.181468 TGAATCAGGCACACAATTTTGCA 60.181 39.130 5.95 0.00 40.75 4.08
641 665 2.975732 TCAGGCACACAATTTTGCAA 57.024 40.000 0.00 0.00 40.75 4.08
642 666 3.257469 TCAGGCACACAATTTTGCAAA 57.743 38.095 8.05 8.05 40.75 3.68
643 667 3.806380 TCAGGCACACAATTTTGCAAAT 58.194 36.364 13.65 0.00 40.75 2.32
644 668 4.197750 TCAGGCACACAATTTTGCAAATT 58.802 34.783 13.65 6.74 40.75 1.82
645 669 4.272991 TCAGGCACACAATTTTGCAAATTC 59.727 37.500 13.65 0.00 40.75 2.17
646 670 4.035324 CAGGCACACAATTTTGCAAATTCA 59.965 37.500 13.65 0.00 40.75 2.57
647 671 4.822896 AGGCACACAATTTTGCAAATTCAT 59.177 33.333 13.65 0.32 40.75 2.57
648 672 5.299782 AGGCACACAATTTTGCAAATTCATT 59.700 32.000 13.65 7.23 40.75 2.57
649 673 5.978322 GGCACACAATTTTGCAAATTCATTT 59.022 32.000 13.65 0.00 40.75 2.32
665 689 9.151471 CAAATTCATTTGCTCTCAAAATCATCT 57.849 29.630 0.00 0.00 44.44 2.90
667 691 9.798994 AATTCATTTGCTCTCAAAATCATCTAC 57.201 29.630 0.00 0.00 44.44 2.59
668 692 8.571461 TTCATTTGCTCTCAAAATCATCTACT 57.429 30.769 0.00 0.00 44.44 2.57
669 693 8.206325 TCATTTGCTCTCAAAATCATCTACTC 57.794 34.615 0.00 0.00 44.44 2.59
670 694 6.992063 TTTGCTCTCAAAATCATCTACTCC 57.008 37.500 0.00 0.00 39.08 3.85
671 695 4.686972 TGCTCTCAAAATCATCTACTCCG 58.313 43.478 0.00 0.00 0.00 4.63
672 696 4.402474 TGCTCTCAAAATCATCTACTCCGA 59.598 41.667 0.00 0.00 0.00 4.55
673 697 4.981674 GCTCTCAAAATCATCTACTCCGAG 59.018 45.833 0.00 0.00 0.00 4.63
674 698 5.221145 GCTCTCAAAATCATCTACTCCGAGA 60.221 44.000 1.33 0.00 0.00 4.04
675 699 6.681616 GCTCTCAAAATCATCTACTCCGAGAA 60.682 42.308 1.33 0.00 0.00 2.87
676 700 7.170393 TCTCAAAATCATCTACTCCGAGAAA 57.830 36.000 1.33 0.00 0.00 2.52
677 701 7.786030 TCTCAAAATCATCTACTCCGAGAAAT 58.214 34.615 1.33 0.00 0.00 2.17
678 702 7.923344 TCTCAAAATCATCTACTCCGAGAAATC 59.077 37.037 1.33 0.00 0.00 2.17
679 703 6.986817 TCAAAATCATCTACTCCGAGAAATCC 59.013 38.462 1.33 0.00 0.00 3.01
680 704 6.739331 AAATCATCTACTCCGAGAAATCCT 57.261 37.500 1.33 0.00 0.00 3.24
681 705 7.841282 AAATCATCTACTCCGAGAAATCCTA 57.159 36.000 1.33 0.00 0.00 2.94
682 706 7.461182 AATCATCTACTCCGAGAAATCCTAG 57.539 40.000 1.33 0.00 0.00 3.02
683 707 5.942961 TCATCTACTCCGAGAAATCCTAGT 58.057 41.667 1.33 0.00 0.00 2.57
684 708 7.075851 TCATCTACTCCGAGAAATCCTAGTA 57.924 40.000 1.33 0.00 0.00 1.82
685 709 6.935771 TCATCTACTCCGAGAAATCCTAGTAC 59.064 42.308 1.33 0.00 0.00 2.73
686 710 5.619220 TCTACTCCGAGAAATCCTAGTACC 58.381 45.833 1.33 0.00 0.00 3.34
687 711 4.246712 ACTCCGAGAAATCCTAGTACCA 57.753 45.455 1.33 0.00 0.00 3.25
688 712 4.805744 ACTCCGAGAAATCCTAGTACCAT 58.194 43.478 1.33 0.00 0.00 3.55
689 713 5.950023 ACTCCGAGAAATCCTAGTACCATA 58.050 41.667 1.33 0.00 0.00 2.74
690 714 6.371278 ACTCCGAGAAATCCTAGTACCATAA 58.629 40.000 1.33 0.00 0.00 1.90
691 715 7.011382 ACTCCGAGAAATCCTAGTACCATAAT 58.989 38.462 1.33 0.00 0.00 1.28
692 716 7.177041 ACTCCGAGAAATCCTAGTACCATAATC 59.823 40.741 1.33 0.00 0.00 1.75
693 717 6.436532 TCCGAGAAATCCTAGTACCATAATCC 59.563 42.308 0.00 0.00 0.00 3.01
694 718 6.323266 CGAGAAATCCTAGTACCATAATCCG 58.677 44.000 0.00 0.00 0.00 4.18
695 719 6.072064 CGAGAAATCCTAGTACCATAATCCGT 60.072 42.308 0.00 0.00 0.00 4.69
696 720 6.994221 AGAAATCCTAGTACCATAATCCGTG 58.006 40.000 0.00 0.00 0.00 4.94
697 721 4.803098 ATCCTAGTACCATAATCCGTGC 57.197 45.455 0.00 0.00 0.00 5.34
698 722 3.568443 TCCTAGTACCATAATCCGTGCA 58.432 45.455 0.00 0.00 0.00 4.57
699 723 3.962063 TCCTAGTACCATAATCCGTGCAA 59.038 43.478 0.00 0.00 0.00 4.08
700 724 4.406326 TCCTAGTACCATAATCCGTGCAAA 59.594 41.667 0.00 0.00 0.00 3.68
701 725 4.750098 CCTAGTACCATAATCCGTGCAAAG 59.250 45.833 0.00 0.00 0.00 2.77
702 726 4.481368 AGTACCATAATCCGTGCAAAGA 57.519 40.909 0.00 0.00 0.00 2.52
703 727 4.189231 AGTACCATAATCCGTGCAAAGAC 58.811 43.478 0.00 0.00 0.00 3.01
704 728 2.006888 ACCATAATCCGTGCAAAGACG 58.993 47.619 0.00 0.00 39.13 4.18
784 828 1.076549 AATCCGCCAAAAGGAGCCA 59.923 52.632 0.00 0.00 41.66 4.75
788 832 1.589716 CCGCCAAAAGGAGCCAAGAG 61.590 60.000 0.00 0.00 0.00 2.85
886 940 3.853330 CGCATCGCCACCAACGAG 61.853 66.667 0.00 0.00 43.74 4.18
930 998 2.203252 CGCCCCCATCATCACCAG 60.203 66.667 0.00 0.00 0.00 4.00
989 1073 1.378514 TTCCAAGCTTCCATCCCGC 60.379 57.895 0.00 0.00 0.00 6.13
1131 1226 0.247262 CACGGTCAATGCACGATTCG 60.247 55.000 4.14 4.14 0.00 3.34
1136 1231 0.726827 TCAATGCACGATTCGCTTCC 59.273 50.000 5.86 0.00 0.00 3.46
1203 1302 2.033141 TCTGCCTGCAGGACAAGC 59.967 61.111 37.21 20.38 43.75 4.01
1324 1423 2.203938 ACAGGAGCCGGGGAAGAA 60.204 61.111 2.18 0.00 0.00 2.52
1330 1429 0.176910 GAGCCGGGGAAGAAGAAGAG 59.823 60.000 2.18 0.00 0.00 2.85
1333 1432 0.827368 CCGGGGAAGAAGAAGAGGAG 59.173 60.000 0.00 0.00 0.00 3.69
1336 1435 2.770447 GGGGAAGAAGAAGAGGAGGAT 58.230 52.381 0.00 0.00 0.00 3.24
1483 1585 3.282021 GCTTGATACTGAGCCCATGAAA 58.718 45.455 0.00 0.00 32.80 2.69
1488 1590 1.180029 ACTGAGCCCATGAAATGCAC 58.820 50.000 0.00 0.00 44.97 4.57
1491 1593 0.099436 GAGCCCATGAAATGCACGAC 59.901 55.000 0.00 0.00 44.97 4.34
1497 1614 3.378112 CCCATGAAATGCACGACATAGTT 59.622 43.478 0.00 0.00 44.97 2.24
1498 1615 4.496341 CCCATGAAATGCACGACATAGTTC 60.496 45.833 0.00 0.00 44.97 3.01
1499 1616 4.333649 CCATGAAATGCACGACATAGTTCT 59.666 41.667 0.00 0.00 44.97 3.01
1500 1617 5.523552 CCATGAAATGCACGACATAGTTCTA 59.476 40.000 0.00 0.00 44.97 2.10
1501 1618 6.292542 CCATGAAATGCACGACATAGTTCTAG 60.293 42.308 0.00 0.00 44.97 2.43
1502 1619 5.961272 TGAAATGCACGACATAGTTCTAGA 58.039 37.500 0.00 0.00 38.34 2.43
1503 1620 5.805486 TGAAATGCACGACATAGTTCTAGAC 59.195 40.000 0.00 0.00 38.34 2.59
1504 1621 5.584253 AATGCACGACATAGTTCTAGACT 57.416 39.130 0.00 0.00 38.34 3.24
1505 1622 6.694877 AATGCACGACATAGTTCTAGACTA 57.305 37.500 0.00 0.00 44.62 2.59
1506 1623 5.481200 TGCACGACATAGTTCTAGACTAC 57.519 43.478 0.00 0.00 43.38 2.73
1507 1624 5.183969 TGCACGACATAGTTCTAGACTACT 58.816 41.667 2.73 2.73 43.38 2.57
1508 1625 6.343703 TGCACGACATAGTTCTAGACTACTA 58.656 40.000 6.73 6.73 43.38 1.82
1509 1626 6.820152 TGCACGACATAGTTCTAGACTACTAA 59.180 38.462 8.10 0.00 43.38 2.24
1510 1627 7.498239 TGCACGACATAGTTCTAGACTACTAAT 59.502 37.037 8.10 1.32 43.38 1.73
1511 1628 8.986847 GCACGACATAGTTCTAGACTACTAATA 58.013 37.037 8.10 0.00 43.38 0.98
1535 1652 6.022958 AGTATAGCCATCTTTTGGGGTTTTT 58.977 36.000 0.00 0.00 46.55 1.94
1560 1677 5.200483 TGGTGGATCTTGTTTGACTTTCTT 58.800 37.500 0.00 0.00 0.00 2.52
1561 1678 6.361433 TGGTGGATCTTGTTTGACTTTCTTA 58.639 36.000 0.00 0.00 0.00 2.10
1564 1681 6.803807 GTGGATCTTGTTTGACTTTCTTATGC 59.196 38.462 0.00 0.00 0.00 3.14
1566 1683 6.128282 GGATCTTGTTTGACTTTCTTATGCGA 60.128 38.462 0.00 0.00 0.00 5.10
1603 1726 3.304659 CGATCCTTTTGTCTGGTTGGTTG 60.305 47.826 0.00 0.00 0.00 3.77
1614 1737 0.596082 GGTTGGTTGATGTTGACCGG 59.404 55.000 0.00 0.00 38.81 5.28
1615 1738 1.600023 GTTGGTTGATGTTGACCGGA 58.400 50.000 9.46 0.00 38.81 5.14
1638 1761 6.827762 GGAGATGATGAAATCTTGAGGAACTT 59.172 38.462 0.00 0.00 45.81 2.66
1641 1764 5.634118 TGATGAAATCTTGAGGAACTTGGT 58.366 37.500 0.00 0.00 45.81 3.67
1674 1810 3.446161 TGTTCCAAGATGTACGTAGAGGG 59.554 47.826 0.00 0.00 0.00 4.30
1684 1820 4.275810 TGTACGTAGAGGGCTAATCAGTT 58.724 43.478 0.00 0.00 0.00 3.16
1685 1821 4.708421 TGTACGTAGAGGGCTAATCAGTTT 59.292 41.667 0.00 0.00 0.00 2.66
1686 1822 4.820894 ACGTAGAGGGCTAATCAGTTTT 57.179 40.909 0.00 0.00 0.00 2.43
1688 1824 4.935808 ACGTAGAGGGCTAATCAGTTTTTG 59.064 41.667 0.00 0.00 0.00 2.44
1689 1825 4.935808 CGTAGAGGGCTAATCAGTTTTTGT 59.064 41.667 0.00 0.00 0.00 2.83
1701 1892 4.336101 TCAGTTTTTGTAACGAGTTTGCG 58.664 39.130 0.00 0.00 37.29 4.85
1725 1916 0.379316 TGATCATGCAATGCAGACGC 59.621 50.000 14.98 4.11 46.21 5.19
1726 1917 0.656495 GATCATGCAATGCAGACGCG 60.656 55.000 14.98 3.53 46.21 6.01
1733 1924 0.095935 CAATGCAGACGCGAAGGAAG 59.904 55.000 15.93 0.00 42.97 3.46
1734 1925 1.021390 AATGCAGACGCGAAGGAAGG 61.021 55.000 15.93 0.00 42.97 3.46
1735 1926 1.888436 ATGCAGACGCGAAGGAAGGA 61.888 55.000 15.93 0.00 42.97 3.36
1736 1927 1.374252 GCAGACGCGAAGGAAGGAA 60.374 57.895 15.93 0.00 0.00 3.36
1739 1930 1.005394 GACGCGAAGGAAGGAACCA 60.005 57.895 15.93 0.00 0.00 3.67
1741 1932 2.391389 CGCGAAGGAAGGAACCAGC 61.391 63.158 0.00 0.00 0.00 4.85
1742 1933 1.302511 GCGAAGGAAGGAACCAGCA 60.303 57.895 0.00 0.00 0.00 4.41
1743 1934 1.301677 GCGAAGGAAGGAACCAGCAG 61.302 60.000 0.00 0.00 0.00 4.24
1744 1935 0.035458 CGAAGGAAGGAACCAGCAGT 59.965 55.000 0.00 0.00 0.00 4.40
1761 1952 2.476018 GCAGTTTTGCCTGTTTTGTTGC 60.476 45.455 0.00 0.00 44.74 4.17
1769 1960 3.118811 TGCCTGTTTTGTTGCTAGCTTTT 60.119 39.130 17.23 0.00 0.00 2.27
1783 1974 5.184479 TGCTAGCTTTTTCATGCTCTCATTT 59.816 36.000 17.23 0.00 40.35 2.32
1794 1985 2.485426 TGCTCTCATTTGTAGCAAGTGC 59.515 45.455 0.00 0.00 42.96 4.40
1816 2022 6.374333 GTGCTGTAATTTGATCTCTGGGTTTA 59.626 38.462 0.00 0.00 0.00 2.01
1817 2023 6.599244 TGCTGTAATTTGATCTCTGGGTTTAG 59.401 38.462 0.00 0.00 0.00 1.85
1818 2024 6.038714 GCTGTAATTTGATCTCTGGGTTTAGG 59.961 42.308 0.00 0.00 0.00 2.69
1819 2025 6.423182 TGTAATTTGATCTCTGGGTTTAGGG 58.577 40.000 0.00 0.00 0.00 3.53
1820 2026 3.366052 TTTGATCTCTGGGTTTAGGGC 57.634 47.619 0.00 0.00 0.00 5.19
1821 2027 1.965414 TGATCTCTGGGTTTAGGGCA 58.035 50.000 0.00 0.00 0.00 5.36
1822 2028 2.492025 TGATCTCTGGGTTTAGGGCAT 58.508 47.619 0.00 0.00 0.00 4.40
1823 2029 2.173356 TGATCTCTGGGTTTAGGGCATG 59.827 50.000 0.00 0.00 0.00 4.06
1824 2030 1.668826 TCTCTGGGTTTAGGGCATGT 58.331 50.000 0.00 0.00 0.00 3.21
1825 2031 1.992557 TCTCTGGGTTTAGGGCATGTT 59.007 47.619 0.00 0.00 0.00 2.71
1826 2032 2.378547 TCTCTGGGTTTAGGGCATGTTT 59.621 45.455 0.00 0.00 0.00 2.83
1827 2033 2.493278 CTCTGGGTTTAGGGCATGTTTG 59.507 50.000 0.00 0.00 0.00 2.93
1828 2034 1.550072 CTGGGTTTAGGGCATGTTTGG 59.450 52.381 0.00 0.00 0.00 3.28
1829 2035 1.133009 TGGGTTTAGGGCATGTTTGGT 60.133 47.619 0.00 0.00 0.00 3.67
1830 2036 1.974957 GGGTTTAGGGCATGTTTGGTT 59.025 47.619 0.00 0.00 0.00 3.67
1831 2037 2.028476 GGGTTTAGGGCATGTTTGGTTC 60.028 50.000 0.00 0.00 0.00 3.62
1832 2038 2.028476 GGTTTAGGGCATGTTTGGTTCC 60.028 50.000 0.00 0.00 0.00 3.62
1833 2039 2.630580 GTTTAGGGCATGTTTGGTTCCA 59.369 45.455 0.00 0.00 0.00 3.53
1834 2040 2.685106 TAGGGCATGTTTGGTTCCAA 57.315 45.000 0.00 0.00 0.00 3.53
1835 2041 2.028561 AGGGCATGTTTGGTTCCAAT 57.971 45.000 5.06 0.00 0.00 3.16
1836 2042 3.182887 AGGGCATGTTTGGTTCCAATA 57.817 42.857 5.06 0.00 0.00 1.90
1837 2043 3.515562 AGGGCATGTTTGGTTCCAATAA 58.484 40.909 5.06 0.00 0.00 1.40
1838 2044 3.515104 AGGGCATGTTTGGTTCCAATAAG 59.485 43.478 5.06 0.00 0.00 1.73
1839 2045 3.260632 GGGCATGTTTGGTTCCAATAAGT 59.739 43.478 5.06 0.00 0.00 2.24
1840 2046 4.494484 GGCATGTTTGGTTCCAATAAGTC 58.506 43.478 5.06 0.00 0.00 3.01
1841 2047 4.021544 GGCATGTTTGGTTCCAATAAGTCA 60.022 41.667 5.06 2.00 0.00 3.41
1842 2048 5.337491 GGCATGTTTGGTTCCAATAAGTCAT 60.337 40.000 5.06 3.89 0.00 3.06
1843 2049 5.807011 GCATGTTTGGTTCCAATAAGTCATC 59.193 40.000 5.06 0.00 0.00 2.92
1844 2050 6.350445 GCATGTTTGGTTCCAATAAGTCATCT 60.350 38.462 5.06 0.00 0.00 2.90
1845 2051 6.573664 TGTTTGGTTCCAATAAGTCATCTG 57.426 37.500 5.06 0.00 0.00 2.90
1846 2052 6.303054 TGTTTGGTTCCAATAAGTCATCTGA 58.697 36.000 5.06 0.00 0.00 3.27
1847 2053 6.206634 TGTTTGGTTCCAATAAGTCATCTGAC 59.793 38.462 5.06 2.01 45.08 3.51
1878 2084 7.964604 GTCAGGTGACTTAAAACTAGTGATT 57.035 36.000 0.00 0.00 41.65 2.57
1879 2085 8.379457 GTCAGGTGACTTAAAACTAGTGATTT 57.621 34.615 0.00 0.00 41.65 2.17
1880 2086 9.485206 GTCAGGTGACTTAAAACTAGTGATTTA 57.515 33.333 0.00 0.00 41.65 1.40
1892 2098 9.686683 AAAACTAGTGATTTATAAGTCATGCCT 57.313 29.630 13.12 8.78 0.00 4.75
1893 2099 8.668510 AACTAGTGATTTATAAGTCATGCCTG 57.331 34.615 13.12 6.10 0.00 4.85
1894 2100 7.796054 ACTAGTGATTTATAAGTCATGCCTGT 58.204 34.615 13.12 6.60 0.00 4.00
1895 2101 8.267894 ACTAGTGATTTATAAGTCATGCCTGTT 58.732 33.333 13.12 0.00 0.00 3.16
1896 2102 7.944729 AGTGATTTATAAGTCATGCCTGTTT 57.055 32.000 13.12 0.00 0.00 2.83
1897 2103 7.765307 AGTGATTTATAAGTCATGCCTGTTTG 58.235 34.615 13.12 0.00 0.00 2.93
1898 2104 7.611467 AGTGATTTATAAGTCATGCCTGTTTGA 59.389 33.333 13.12 0.00 0.00 2.69
1899 2105 8.408601 GTGATTTATAAGTCATGCCTGTTTGAT 58.591 33.333 13.12 0.00 0.00 2.57
1900 2106 8.970020 TGATTTATAAGTCATGCCTGTTTGATT 58.030 29.630 6.58 0.00 0.00 2.57
1901 2107 9.241317 GATTTATAAGTCATGCCTGTTTGATTG 57.759 33.333 3.27 0.00 0.00 2.67
1902 2108 7.701539 TTATAAGTCATGCCTGTTTGATTGT 57.298 32.000 0.00 0.00 0.00 2.71
1903 2109 4.510038 AAGTCATGCCTGTTTGATTGTC 57.490 40.909 0.00 0.00 0.00 3.18
1904 2110 3.489355 AGTCATGCCTGTTTGATTGTCA 58.511 40.909 0.00 0.00 0.00 3.58
1905 2111 3.254166 AGTCATGCCTGTTTGATTGTCAC 59.746 43.478 0.00 0.00 0.00 3.67
1906 2112 2.557924 TCATGCCTGTTTGATTGTCACC 59.442 45.455 0.00 0.00 0.00 4.02
1907 2113 2.363306 TGCCTGTTTGATTGTCACCT 57.637 45.000 0.00 0.00 0.00 4.00
1908 2114 1.955778 TGCCTGTTTGATTGTCACCTG 59.044 47.619 0.00 0.00 0.00 4.00
1909 2115 2.229792 GCCTGTTTGATTGTCACCTGA 58.770 47.619 0.00 0.00 0.00 3.86
1910 2116 2.821969 GCCTGTTTGATTGTCACCTGAT 59.178 45.455 0.00 0.00 0.00 2.90
1911 2117 3.256631 GCCTGTTTGATTGTCACCTGATT 59.743 43.478 0.00 0.00 0.00 2.57
1912 2118 4.262164 GCCTGTTTGATTGTCACCTGATTT 60.262 41.667 0.00 0.00 0.00 2.17
1913 2119 5.048083 GCCTGTTTGATTGTCACCTGATTTA 60.048 40.000 0.00 0.00 0.00 1.40
1914 2120 6.350445 GCCTGTTTGATTGTCACCTGATTTAT 60.350 38.462 0.00 0.00 0.00 1.40
1915 2121 7.148086 GCCTGTTTGATTGTCACCTGATTTATA 60.148 37.037 0.00 0.00 0.00 0.98
1916 2122 8.739039 CCTGTTTGATTGTCACCTGATTTATAA 58.261 33.333 0.00 0.00 0.00 0.98
1917 2123 9.778993 CTGTTTGATTGTCACCTGATTTATAAG 57.221 33.333 0.00 0.00 0.00 1.73
1918 2124 9.295825 TGTTTGATTGTCACCTGATTTATAAGT 57.704 29.630 0.00 0.00 0.00 2.24
1919 2125 9.774742 GTTTGATTGTCACCTGATTTATAAGTC 57.225 33.333 1.17 1.17 0.00 3.01
1920 2126 9.513906 TTTGATTGTCACCTGATTTATAAGTCA 57.486 29.630 9.97 9.97 0.00 3.41
1921 2127 9.685276 TTGATTGTCACCTGATTTATAAGTCAT 57.315 29.630 10.71 0.00 0.00 3.06
1922 2128 9.330063 TGATTGTCACCTGATTTATAAGTCATC 57.670 33.333 10.71 4.58 0.00 2.92
1923 2129 9.553064 GATTGTCACCTGATTTATAAGTCATCT 57.447 33.333 10.71 0.00 0.00 2.90
1924 2130 8.722480 TTGTCACCTGATTTATAAGTCATCTG 57.278 34.615 10.71 9.09 0.00 2.90
1925 2131 8.078060 TGTCACCTGATTTATAAGTCATCTGA 57.922 34.615 10.71 10.88 0.00 3.27
1926 2132 8.200120 TGTCACCTGATTTATAAGTCATCTGAG 58.800 37.037 10.71 0.27 0.00 3.35
1927 2133 7.170658 GTCACCTGATTTATAAGTCATCTGAGC 59.829 40.741 10.71 6.53 0.00 4.26
1928 2134 6.988580 CACCTGATTTATAAGTCATCTGAGCA 59.011 38.462 10.71 0.00 0.00 4.26
1929 2135 6.989169 ACCTGATTTATAAGTCATCTGAGCAC 59.011 38.462 10.71 0.00 0.00 4.40
1930 2136 6.988580 CCTGATTTATAAGTCATCTGAGCACA 59.011 38.462 10.71 0.00 0.00 4.57
1931 2137 7.042187 CCTGATTTATAAGTCATCTGAGCACAC 60.042 40.741 10.71 0.00 0.00 3.82
1932 2138 6.763135 TGATTTATAAGTCATCTGAGCACACC 59.237 38.462 6.58 0.00 0.00 4.16
1933 2139 5.939764 TTATAAGTCATCTGAGCACACCT 57.060 39.130 0.00 0.00 0.00 4.00
1934 2140 4.833478 ATAAGTCATCTGAGCACACCTT 57.167 40.909 0.00 0.00 0.00 3.50
1935 2141 2.758736 AGTCATCTGAGCACACCTTC 57.241 50.000 0.00 0.00 0.00 3.46
1936 2142 1.277557 AGTCATCTGAGCACACCTTCC 59.722 52.381 0.00 0.00 0.00 3.46
1937 2143 0.615331 TCATCTGAGCACACCTTCCC 59.385 55.000 0.00 0.00 0.00 3.97
1938 2144 0.325933 CATCTGAGCACACCTTCCCA 59.674 55.000 0.00 0.00 0.00 4.37
1939 2145 1.064906 CATCTGAGCACACCTTCCCAT 60.065 52.381 0.00 0.00 0.00 4.00
1940 2146 0.615331 TCTGAGCACACCTTCCCATC 59.385 55.000 0.00 0.00 0.00 3.51
1941 2147 0.617413 CTGAGCACACCTTCCCATCT 59.383 55.000 0.00 0.00 0.00 2.90
1942 2148 1.004044 CTGAGCACACCTTCCCATCTT 59.996 52.381 0.00 0.00 0.00 2.40
1943 2149 1.271543 TGAGCACACCTTCCCATCTTG 60.272 52.381 0.00 0.00 0.00 3.02
1944 2150 0.610232 AGCACACCTTCCCATCTTGC 60.610 55.000 0.00 0.00 0.00 4.01
1945 2151 0.610232 GCACACCTTCCCATCTTGCT 60.610 55.000 0.00 0.00 0.00 3.91
1946 2152 1.915141 CACACCTTCCCATCTTGCTT 58.085 50.000 0.00 0.00 0.00 3.91
1947 2153 2.242043 CACACCTTCCCATCTTGCTTT 58.758 47.619 0.00 0.00 0.00 3.51
1948 2154 2.629617 CACACCTTCCCATCTTGCTTTT 59.370 45.455 0.00 0.00 0.00 2.27
1949 2155 3.070015 CACACCTTCCCATCTTGCTTTTT 59.930 43.478 0.00 0.00 0.00 1.94
1950 2156 4.280677 CACACCTTCCCATCTTGCTTTTTA 59.719 41.667 0.00 0.00 0.00 1.52
1951 2157 5.047092 CACACCTTCCCATCTTGCTTTTTAT 60.047 40.000 0.00 0.00 0.00 1.40
1952 2158 5.047092 ACACCTTCCCATCTTGCTTTTTATG 60.047 40.000 0.00 0.00 0.00 1.90
1953 2159 5.047092 CACCTTCCCATCTTGCTTTTTATGT 60.047 40.000 0.00 0.00 0.00 2.29
1954 2160 6.152661 CACCTTCCCATCTTGCTTTTTATGTA 59.847 38.462 0.00 0.00 0.00 2.29
1955 2161 6.723977 ACCTTCCCATCTTGCTTTTTATGTAA 59.276 34.615 0.00 0.00 0.00 2.41
1956 2162 7.234577 ACCTTCCCATCTTGCTTTTTATGTAAA 59.765 33.333 0.00 0.00 0.00 2.01
1957 2163 7.761249 CCTTCCCATCTTGCTTTTTATGTAAAG 59.239 37.037 0.00 0.00 38.00 1.85
1958 2164 7.169158 TCCCATCTTGCTTTTTATGTAAAGG 57.831 36.000 0.00 0.00 36.00 3.11
1959 2165 6.723977 TCCCATCTTGCTTTTTATGTAAAGGT 59.276 34.615 0.00 0.00 36.00 3.50
1960 2166 6.813152 CCCATCTTGCTTTTTATGTAAAGGTG 59.187 38.462 0.00 0.00 36.00 4.00
1961 2167 7.309744 CCCATCTTGCTTTTTATGTAAAGGTGA 60.310 37.037 0.00 0.00 36.00 4.02
1962 2168 8.253113 CCATCTTGCTTTTTATGTAAAGGTGAT 58.747 33.333 0.00 0.00 36.00 3.06
1963 2169 9.079833 CATCTTGCTTTTTATGTAAAGGTGATG 57.920 33.333 0.00 0.00 36.00 3.07
1964 2170 7.601856 TCTTGCTTTTTATGTAAAGGTGATGG 58.398 34.615 0.00 0.00 36.00 3.51
1965 2171 6.279513 TGCTTTTTATGTAAAGGTGATGGG 57.720 37.500 0.00 0.00 36.00 4.00
1966 2172 6.013379 TGCTTTTTATGTAAAGGTGATGGGA 58.987 36.000 0.00 0.00 36.00 4.37
1967 2173 6.071616 TGCTTTTTATGTAAAGGTGATGGGAC 60.072 38.462 0.00 0.00 36.00 4.46
1968 2174 6.152831 GCTTTTTATGTAAAGGTGATGGGACT 59.847 38.462 0.00 0.00 36.00 3.85
1969 2175 7.628580 GCTTTTTATGTAAAGGTGATGGGACTC 60.629 40.741 0.00 0.00 36.00 3.36
1970 2176 6.381498 TTTATGTAAAGGTGATGGGACTCA 57.619 37.500 0.00 0.00 0.00 3.41
1971 2177 6.575244 TTATGTAAAGGTGATGGGACTCAT 57.425 37.500 0.00 0.00 39.13 2.90
1972 2178 4.220693 TGTAAAGGTGATGGGACTCATG 57.779 45.455 0.00 0.00 35.97 3.07
1973 2179 2.134789 AAAGGTGATGGGACTCATGC 57.865 50.000 0.00 0.00 35.97 4.06
1974 2180 0.994247 AAGGTGATGGGACTCATGCA 59.006 50.000 0.00 0.00 35.97 3.96
1975 2181 0.994247 AGGTGATGGGACTCATGCAA 59.006 50.000 0.00 0.00 35.97 4.08
1976 2182 1.355381 AGGTGATGGGACTCATGCAAA 59.645 47.619 0.00 0.00 35.97 3.68
1977 2183 2.170166 GGTGATGGGACTCATGCAAAA 58.830 47.619 0.00 0.00 35.97 2.44
1978 2184 2.165030 GGTGATGGGACTCATGCAAAAG 59.835 50.000 0.00 0.00 35.97 2.27
1979 2185 3.084039 GTGATGGGACTCATGCAAAAGA 58.916 45.455 0.00 0.00 35.97 2.52
1980 2186 3.128242 GTGATGGGACTCATGCAAAAGAG 59.872 47.826 11.31 11.31 35.97 2.85
1981 2187 2.205022 TGGGACTCATGCAAAAGAGG 57.795 50.000 15.71 2.27 36.20 3.69
1982 2188 1.272092 TGGGACTCATGCAAAAGAGGG 60.272 52.381 15.71 0.00 36.20 4.30
1983 2189 1.272147 GGGACTCATGCAAAAGAGGGT 60.272 52.381 15.71 0.00 36.20 4.34
1984 2190 1.815003 GGACTCATGCAAAAGAGGGTG 59.185 52.381 15.71 0.00 36.20 4.61
1985 2191 2.553028 GGACTCATGCAAAAGAGGGTGA 60.553 50.000 15.71 1.43 36.20 4.02
1986 2192 2.485814 GACTCATGCAAAAGAGGGTGAC 59.514 50.000 15.71 2.47 36.20 3.67
1987 2193 2.107204 ACTCATGCAAAAGAGGGTGACT 59.893 45.455 15.71 0.00 36.20 3.41
1988 2194 3.152341 CTCATGCAAAAGAGGGTGACTT 58.848 45.455 0.00 0.00 0.00 3.01
1989 2195 4.202461 ACTCATGCAAAAGAGGGTGACTTA 60.202 41.667 15.71 0.00 36.20 2.24
1990 2196 4.922206 TCATGCAAAAGAGGGTGACTTAT 58.078 39.130 0.00 0.00 0.00 1.73
1991 2197 6.061022 TCATGCAAAAGAGGGTGACTTATA 57.939 37.500 0.00 0.00 0.00 0.98
1992 2198 6.480763 TCATGCAAAAGAGGGTGACTTATAA 58.519 36.000 0.00 0.00 0.00 0.98
1993 2199 6.599244 TCATGCAAAAGAGGGTGACTTATAAG 59.401 38.462 11.05 11.05 0.00 1.73
1994 2200 5.876357 TGCAAAAGAGGGTGACTTATAAGT 58.124 37.500 18.05 18.05 43.16 2.24
1995 2201 6.303839 TGCAAAAGAGGGTGACTTATAAGTT 58.696 36.000 18.96 3.04 39.88 2.66
1996 2202 6.775629 TGCAAAAGAGGGTGACTTATAAGTTT 59.224 34.615 18.96 5.24 39.88 2.66
1997 2203 7.286775 TGCAAAAGAGGGTGACTTATAAGTTTT 59.713 33.333 18.96 10.67 39.88 2.43
1998 2204 8.789762 GCAAAAGAGGGTGACTTATAAGTTTTA 58.210 33.333 18.96 6.80 39.88 1.52
2003 2209 9.503399 AGAGGGTGACTTATAAGTTTTAAGTTG 57.497 33.333 18.96 0.00 39.40 3.16
2004 2210 8.631480 AGGGTGACTTATAAGTTTTAAGTTGG 57.369 34.615 18.96 0.00 39.40 3.77
2005 2211 7.668469 AGGGTGACTTATAAGTTTTAAGTTGGG 59.332 37.037 18.96 0.00 39.40 4.12
2006 2212 7.094075 GGGTGACTTATAAGTTTTAAGTTGGGG 60.094 40.741 18.96 0.00 39.40 4.96
2007 2213 7.449395 GGTGACTTATAAGTTTTAAGTTGGGGT 59.551 37.037 18.96 0.00 39.40 4.95
2008 2214 8.294577 GTGACTTATAAGTTTTAAGTTGGGGTG 58.705 37.037 18.96 0.00 39.40 4.61
2009 2215 7.449086 TGACTTATAAGTTTTAAGTTGGGGTGG 59.551 37.037 18.96 0.00 39.40 4.61
2010 2216 7.528675 ACTTATAAGTTTTAAGTTGGGGTGGA 58.471 34.615 12.50 0.00 36.70 4.02
2011 2217 7.668469 ACTTATAAGTTTTAAGTTGGGGTGGAG 59.332 37.037 12.50 0.00 36.70 3.86
2012 2218 2.594131 AGTTTTAAGTTGGGGTGGAGC 58.406 47.619 0.00 0.00 0.00 4.70
2013 2219 2.091555 AGTTTTAAGTTGGGGTGGAGCA 60.092 45.455 0.00 0.00 0.00 4.26
2014 2220 2.696187 GTTTTAAGTTGGGGTGGAGCAA 59.304 45.455 0.00 0.00 0.00 3.91
2015 2221 2.990740 TTAAGTTGGGGTGGAGCAAT 57.009 45.000 0.00 0.00 0.00 3.56
2016 2222 2.990740 TAAGTTGGGGTGGAGCAATT 57.009 45.000 0.00 0.00 0.00 2.32
2017 2223 2.101640 AAGTTGGGGTGGAGCAATTT 57.898 45.000 0.00 0.00 0.00 1.82
2018 2224 2.990740 AGTTGGGGTGGAGCAATTTA 57.009 45.000 0.00 0.00 0.00 1.40
2019 2225 3.473113 AGTTGGGGTGGAGCAATTTAT 57.527 42.857 0.00 0.00 0.00 1.40
2020 2226 3.099141 AGTTGGGGTGGAGCAATTTATG 58.901 45.455 0.00 0.00 0.00 1.90
2021 2227 3.096092 GTTGGGGTGGAGCAATTTATGA 58.904 45.455 0.00 0.00 0.00 2.15
2022 2228 2.733956 TGGGGTGGAGCAATTTATGAC 58.266 47.619 0.00 0.00 0.00 3.06
2023 2229 2.311542 TGGGGTGGAGCAATTTATGACT 59.688 45.455 0.00 0.00 0.00 3.41
2024 2230 3.245586 TGGGGTGGAGCAATTTATGACTT 60.246 43.478 0.00 0.00 0.00 3.01
2025 2231 4.017958 TGGGGTGGAGCAATTTATGACTTA 60.018 41.667 0.00 0.00 0.00 2.24
2026 2232 5.140454 GGGGTGGAGCAATTTATGACTTAT 58.860 41.667 0.00 0.00 0.00 1.73
2027 2233 6.126332 TGGGGTGGAGCAATTTATGACTTATA 60.126 38.462 0.00 0.00 0.00 0.98
2028 2234 6.775629 GGGGTGGAGCAATTTATGACTTATAA 59.224 38.462 0.00 0.00 0.00 0.98
2029 2235 7.040409 GGGGTGGAGCAATTTATGACTTATAAG 60.040 40.741 11.05 11.05 33.03 1.73
2030 2236 7.502561 GGGTGGAGCAATTTATGACTTATAAGT 59.497 37.037 18.05 18.05 43.16 2.24
2031 2237 8.903820 GGTGGAGCAATTTATGACTTATAAGTT 58.096 33.333 18.96 7.26 39.88 2.66
2032 2238 9.722056 GTGGAGCAATTTATGACTTATAAGTTG 57.278 33.333 18.96 12.15 44.95 3.16
2033 2239 8.902806 TGGAGCAATTTATGACTTATAAGTTGG 58.097 33.333 18.96 1.52 43.59 3.77
2034 2240 8.352942 GGAGCAATTTATGACTTATAAGTTGGG 58.647 37.037 18.96 5.41 43.59 4.12
2035 2241 8.823220 AGCAATTTATGACTTATAAGTTGGGT 57.177 30.769 18.96 3.11 43.59 4.51
2036 2242 8.903820 AGCAATTTATGACTTATAAGTTGGGTC 58.096 33.333 18.96 7.15 43.59 4.46
2037 2243 8.903820 GCAATTTATGACTTATAAGTTGGGTCT 58.096 33.333 18.96 1.91 43.59 3.85
2039 2245 9.975218 AATTTATGACTTATAAGTTGGGTCTGT 57.025 29.630 18.96 3.43 39.88 3.41
2040 2246 9.975218 ATTTATGACTTATAAGTTGGGTCTGTT 57.025 29.630 18.96 0.00 39.88 3.16
2041 2247 9.802039 TTTATGACTTATAAGTTGGGTCTGTTT 57.198 29.630 18.96 0.00 39.88 2.83
2044 2250 6.877322 TGACTTATAAGTTGGGTCTGTTTAGC 59.123 38.462 18.96 2.46 39.88 3.09
2045 2251 6.775708 ACTTATAAGTTGGGTCTGTTTAGCA 58.224 36.000 12.50 0.00 35.21 3.49
2046 2252 7.228590 ACTTATAAGTTGGGTCTGTTTAGCAA 58.771 34.615 12.50 0.00 35.21 3.91
2047 2253 7.722285 ACTTATAAGTTGGGTCTGTTTAGCAAA 59.278 33.333 12.50 0.00 35.21 3.68
2048 2254 6.969993 ATAAGTTGGGTCTGTTTAGCAAAA 57.030 33.333 0.00 0.00 0.00 2.44
2049 2255 5.869649 AAGTTGGGTCTGTTTAGCAAAAT 57.130 34.783 0.00 0.00 0.00 1.82
2050 2256 6.969993 AAGTTGGGTCTGTTTAGCAAAATA 57.030 33.333 0.00 0.00 0.00 1.40
2051 2257 6.969993 AGTTGGGTCTGTTTAGCAAAATAA 57.030 33.333 0.00 0.00 0.00 1.40
2052 2258 6.981722 AGTTGGGTCTGTTTAGCAAAATAAG 58.018 36.000 0.00 0.00 0.00 1.73
2053 2259 6.549736 AGTTGGGTCTGTTTAGCAAAATAAGT 59.450 34.615 0.00 0.00 0.00 2.24
2054 2260 6.569179 TGGGTCTGTTTAGCAAAATAAGTC 57.431 37.500 0.00 0.00 0.00 3.01
2055 2261 6.065374 TGGGTCTGTTTAGCAAAATAAGTCA 58.935 36.000 0.00 0.00 0.00 3.41
2086 2292 8.441312 TTTCACTTTTCGACTTATAAGTTGGT 57.559 30.769 25.99 16.17 39.88 3.67
2087 2293 7.416154 TCACTTTTCGACTTATAAGTTGGTG 57.584 36.000 25.99 23.76 39.88 4.17
2089 2295 7.170320 TCACTTTTCGACTTATAAGTTGGTGAC 59.830 37.037 25.99 10.35 39.88 3.67
2090 2296 7.170998 CACTTTTCGACTTATAAGTTGGTGACT 59.829 37.037 25.99 9.24 39.88 3.41
2109 2315 8.354426 TGGTGACTTATTTAAAACTAAACAGGC 58.646 33.333 0.00 0.00 0.00 4.85
2110 2316 7.811236 GGTGACTTATTTAAAACTAAACAGGCC 59.189 37.037 0.00 0.00 0.00 5.19
2119 3380 2.791655 ACTAAACAGGCCCTTAACTGC 58.208 47.619 0.00 0.00 38.25 4.40
2124 3385 2.992164 GGCCCTTAACTGCCCGTA 59.008 61.111 0.00 0.00 41.97 4.02
2139 3403 3.244422 TGCCCGTATTTGAGACTTTGACT 60.244 43.478 0.00 0.00 0.00 3.41
2140 3404 3.751698 GCCCGTATTTGAGACTTTGACTT 59.248 43.478 0.00 0.00 0.00 3.01
2188 3480 3.253188 TCTTGCTTGGATTCCTTGTTTCG 59.747 43.478 3.95 0.00 0.00 3.46
2193 3485 1.002201 TGGATTCCTTGTTTCGCGGTA 59.998 47.619 6.13 0.00 0.00 4.02
2194 3486 2.078392 GGATTCCTTGTTTCGCGGTAA 58.922 47.619 6.13 0.00 0.00 2.85
2195 3487 2.681344 GGATTCCTTGTTTCGCGGTAAT 59.319 45.455 6.13 0.00 0.00 1.89
2196 3488 3.128068 GGATTCCTTGTTTCGCGGTAATT 59.872 43.478 6.13 0.00 0.00 1.40
2197 3489 3.817148 TTCCTTGTTTCGCGGTAATTC 57.183 42.857 6.13 0.00 0.00 2.17
2198 3490 3.048337 TCCTTGTTTCGCGGTAATTCT 57.952 42.857 6.13 0.00 0.00 2.40
2247 3554 0.109723 TAGGCTTTGGAAACGGCTGT 59.890 50.000 0.00 0.00 35.11 4.40
2248 3555 1.007387 GGCTTTGGAAACGGCTGTG 60.007 57.895 0.00 0.00 0.00 3.66
2256 3563 1.542547 GGAAACGGCTGTGAAAGGAGA 60.543 52.381 0.00 0.00 0.00 3.71
2273 3580 5.574970 AGGAGAGGAGGCATTTATTTAGG 57.425 43.478 0.00 0.00 0.00 2.69
2274 3581 4.352298 AGGAGAGGAGGCATTTATTTAGGG 59.648 45.833 0.00 0.00 0.00 3.53
2299 3610 0.534203 TCCTTGGAAACGTCAGTGCC 60.534 55.000 0.00 0.00 0.00 5.01
2301 3612 0.868406 CTTGGAAACGTCAGTGCCTC 59.132 55.000 0.00 0.00 0.00 4.70
2302 3613 0.878523 TTGGAAACGTCAGTGCCTCG 60.879 55.000 0.00 0.00 0.00 4.63
2307 3618 4.498520 CGTCAGTGCCTCGGCGAT 62.499 66.667 11.27 0.00 45.51 4.58
2308 3619 2.887568 GTCAGTGCCTCGGCGATG 60.888 66.667 11.27 9.35 45.51 3.84
2309 3620 4.819761 TCAGTGCCTCGGCGATGC 62.820 66.667 26.79 26.79 45.51 3.91
2311 3622 4.393155 AGTGCCTCGGCGATGCAA 62.393 61.111 34.93 19.81 45.51 4.08
2312 3623 3.204827 GTGCCTCGGCGATGCAAT 61.205 61.111 34.93 0.00 45.51 3.56
2313 3624 1.887242 GTGCCTCGGCGATGCAATA 60.887 57.895 34.93 15.38 45.51 1.90
2314 3625 1.071299 TGCCTCGGCGATGCAATAT 59.929 52.632 32.23 0.00 45.51 1.28
2315 3626 1.229975 TGCCTCGGCGATGCAATATG 61.230 55.000 32.23 9.32 45.51 1.78
2316 3627 1.499056 CCTCGGCGATGCAATATGC 59.501 57.895 11.27 0.00 45.29 3.14
2317 3628 0.952497 CCTCGGCGATGCAATATGCT 60.952 55.000 11.27 0.00 45.31 3.79
2318 3629 1.672737 CCTCGGCGATGCAATATGCTA 60.673 52.381 11.27 0.00 45.31 3.49
2319 3630 1.391485 CTCGGCGATGCAATATGCTAC 59.609 52.381 11.27 0.00 45.31 3.58
2320 3631 1.000843 TCGGCGATGCAATATGCTACT 59.999 47.619 4.99 0.00 45.31 2.57
2321 3632 1.391485 CGGCGATGCAATATGCTACTC 59.609 52.381 0.00 0.00 45.31 2.59
2322 3633 1.391485 GGCGATGCAATATGCTACTCG 59.609 52.381 13.92 13.92 45.31 4.18
2323 3634 2.061773 GCGATGCAATATGCTACTCGT 58.938 47.619 17.12 0.00 45.31 4.18
2324 3635 2.159920 GCGATGCAATATGCTACTCGTG 60.160 50.000 17.12 0.00 45.31 4.35
2325 3636 3.052745 CGATGCAATATGCTACTCGTGT 58.947 45.455 3.78 0.00 45.31 4.49
2326 3637 3.121227 CGATGCAATATGCTACTCGTGTG 60.121 47.826 0.00 0.00 45.31 3.82
2404 3721 2.436646 CACAGCTAGCCCCCAACG 60.437 66.667 12.13 0.00 0.00 4.10
2469 3789 3.432588 CAGCAGCAGCAGCAGTCC 61.433 66.667 12.92 0.00 45.49 3.85
2470 3790 3.949980 AGCAGCAGCAGCAGTCCA 61.950 61.111 12.92 0.00 45.49 4.02
2471 3791 2.981909 GCAGCAGCAGCAGTCCAA 60.982 61.111 4.63 0.00 45.49 3.53
2472 3792 2.952245 CAGCAGCAGCAGTCCAAC 59.048 61.111 3.17 0.00 45.49 3.77
2473 3793 1.600076 CAGCAGCAGCAGTCCAACT 60.600 57.895 3.17 0.00 45.49 3.16
2474 3794 1.150081 AGCAGCAGCAGTCCAACTT 59.850 52.632 3.17 0.00 45.49 2.66
2475 3795 0.397941 AGCAGCAGCAGTCCAACTTA 59.602 50.000 3.17 0.00 45.49 2.24
2476 3796 0.519077 GCAGCAGCAGTCCAACTTAC 59.481 55.000 0.00 0.00 41.58 2.34
2477 3797 1.882912 CAGCAGCAGTCCAACTTACA 58.117 50.000 0.00 0.00 0.00 2.41
2478 3798 1.532868 CAGCAGCAGTCCAACTTACAC 59.467 52.381 0.00 0.00 0.00 2.90
2479 3799 1.140852 AGCAGCAGTCCAACTTACACA 59.859 47.619 0.00 0.00 0.00 3.72
2480 3800 1.264288 GCAGCAGTCCAACTTACACAC 59.736 52.381 0.00 0.00 0.00 3.82
2481 3801 2.560504 CAGCAGTCCAACTTACACACA 58.439 47.619 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 1.219124 GGCTTGCTCGTCCATCTCA 59.781 57.895 0.00 0.00 0.00 3.27
195 204 2.883468 CTCGCGATAGTCGGCTCGT 61.883 63.158 10.36 0.00 40.84 4.18
300 309 4.883300 GTCGGAGCGTAGGCGTCG 62.883 72.222 15.55 15.55 46.35 5.12
529 553 2.095843 GCGCGCTAAAAGTCACGG 59.904 61.111 26.67 0.00 0.00 4.94
579 603 5.070001 CACAGGACTTCTAAACCCAAATGA 58.930 41.667 0.00 0.00 0.00 2.57
580 604 4.827284 ACACAGGACTTCTAAACCCAAATG 59.173 41.667 0.00 0.00 0.00 2.32
581 605 5.061721 ACACAGGACTTCTAAACCCAAAT 57.938 39.130 0.00 0.00 0.00 2.32
582 606 4.513406 ACACAGGACTTCTAAACCCAAA 57.487 40.909 0.00 0.00 0.00 3.28
583 607 4.513406 AACACAGGACTTCTAAACCCAA 57.487 40.909 0.00 0.00 0.00 4.12
584 608 4.513406 AAACACAGGACTTCTAAACCCA 57.487 40.909 0.00 0.00 0.00 4.51
585 609 5.847111 AAAAACACAGGACTTCTAAACCC 57.153 39.130 0.00 0.00 0.00 4.11
604 628 7.039853 TGTGCCTGATTCACATGAATAGAAAAA 60.040 33.333 7.09 0.00 44.14 1.94
605 629 6.433716 TGTGCCTGATTCACATGAATAGAAAA 59.566 34.615 7.09 0.00 44.14 2.29
606 630 5.945191 TGTGCCTGATTCACATGAATAGAAA 59.055 36.000 7.09 0.00 44.14 2.52
607 631 5.355071 GTGTGCCTGATTCACATGAATAGAA 59.645 40.000 7.09 0.00 44.96 2.10
608 632 4.877823 GTGTGCCTGATTCACATGAATAGA 59.122 41.667 7.09 0.00 44.96 1.98
609 633 4.637091 TGTGTGCCTGATTCACATGAATAG 59.363 41.667 7.09 5.84 44.96 1.73
610 634 4.587891 TGTGTGCCTGATTCACATGAATA 58.412 39.130 7.09 0.00 44.96 1.75
611 635 3.423749 TGTGTGCCTGATTCACATGAAT 58.576 40.909 6.82 6.82 44.96 2.57
612 636 2.861274 TGTGTGCCTGATTCACATGAA 58.139 42.857 0.00 0.00 44.96 2.57
613 637 2.565046 TGTGTGCCTGATTCACATGA 57.435 45.000 0.00 0.00 44.96 3.07
614 638 3.861276 ATTGTGTGCCTGATTCACATG 57.139 42.857 0.00 0.00 44.96 3.21
615 639 4.877378 AAATTGTGTGCCTGATTCACAT 57.123 36.364 0.00 0.00 44.96 3.21
616 640 4.370049 CAAAATTGTGTGCCTGATTCACA 58.630 39.130 0.00 0.00 41.62 3.58
617 641 3.184986 GCAAAATTGTGTGCCTGATTCAC 59.815 43.478 0.00 0.00 34.58 3.18
618 642 3.181468 TGCAAAATTGTGTGCCTGATTCA 60.181 39.130 0.00 0.00 40.14 2.57
619 643 3.391965 TGCAAAATTGTGTGCCTGATTC 58.608 40.909 0.00 0.00 40.14 2.52
620 644 3.472283 TGCAAAATTGTGTGCCTGATT 57.528 38.095 0.00 0.00 40.14 2.57
621 645 3.472283 TTGCAAAATTGTGTGCCTGAT 57.528 38.095 0.00 0.00 40.14 2.90
622 646 2.975732 TTGCAAAATTGTGTGCCTGA 57.024 40.000 0.00 0.00 40.14 3.86
623 647 4.035324 TGAATTTGCAAAATTGTGTGCCTG 59.965 37.500 17.19 0.00 40.14 4.85
624 648 4.197750 TGAATTTGCAAAATTGTGTGCCT 58.802 34.783 17.19 0.00 40.14 4.75
625 649 4.548991 TGAATTTGCAAAATTGTGTGCC 57.451 36.364 17.19 0.00 40.14 5.01
626 650 6.858057 CAAATGAATTTGCAAAATTGTGTGC 58.142 32.000 17.19 0.00 40.42 4.57
641 665 9.798994 GTAGATGATTTTGAGAGCAAATGAATT 57.201 29.630 0.00 0.00 43.07 2.17
642 666 9.186837 AGTAGATGATTTTGAGAGCAAATGAAT 57.813 29.630 0.00 0.00 43.07 2.57
643 667 8.571461 AGTAGATGATTTTGAGAGCAAATGAA 57.429 30.769 0.00 0.00 43.07 2.57
644 668 7.281774 GGAGTAGATGATTTTGAGAGCAAATGA 59.718 37.037 0.00 0.00 43.07 2.57
645 669 7.416022 GGAGTAGATGATTTTGAGAGCAAATG 58.584 38.462 0.00 0.00 43.07 2.32
646 670 6.259608 CGGAGTAGATGATTTTGAGAGCAAAT 59.740 38.462 0.00 0.00 43.07 2.32
647 671 5.582269 CGGAGTAGATGATTTTGAGAGCAAA 59.418 40.000 0.00 0.00 41.97 3.68
648 672 5.105351 TCGGAGTAGATGATTTTGAGAGCAA 60.105 40.000 0.00 0.00 0.00 3.91
649 673 4.402474 TCGGAGTAGATGATTTTGAGAGCA 59.598 41.667 0.00 0.00 0.00 4.26
650 674 4.938080 TCGGAGTAGATGATTTTGAGAGC 58.062 43.478 0.00 0.00 0.00 4.09
651 675 6.384258 TCTCGGAGTAGATGATTTTGAGAG 57.616 41.667 4.69 0.00 0.00 3.20
652 676 6.775594 TTCTCGGAGTAGATGATTTTGAGA 57.224 37.500 4.69 0.00 0.00 3.27
653 677 7.170658 GGATTTCTCGGAGTAGATGATTTTGAG 59.829 40.741 4.69 0.00 0.00 3.02
654 678 6.986817 GGATTTCTCGGAGTAGATGATTTTGA 59.013 38.462 4.69 0.00 0.00 2.69
655 679 6.989169 AGGATTTCTCGGAGTAGATGATTTTG 59.011 38.462 4.69 0.00 0.00 2.44
656 680 7.130681 AGGATTTCTCGGAGTAGATGATTTT 57.869 36.000 4.69 0.00 0.00 1.82
657 681 6.739331 AGGATTTCTCGGAGTAGATGATTT 57.261 37.500 4.69 0.00 0.00 2.17
658 682 7.007723 ACTAGGATTTCTCGGAGTAGATGATT 58.992 38.462 4.69 0.00 0.00 2.57
659 683 6.548321 ACTAGGATTTCTCGGAGTAGATGAT 58.452 40.000 4.69 0.00 0.00 2.45
660 684 5.942961 ACTAGGATTTCTCGGAGTAGATGA 58.057 41.667 4.69 0.00 0.00 2.92
661 685 6.149807 GGTACTAGGATTTCTCGGAGTAGATG 59.850 46.154 4.69 0.00 0.00 2.90
662 686 6.183361 TGGTACTAGGATTTCTCGGAGTAGAT 60.183 42.308 4.69 0.00 0.00 1.98
663 687 5.131642 TGGTACTAGGATTTCTCGGAGTAGA 59.868 44.000 4.69 0.00 0.00 2.59
664 688 5.374921 TGGTACTAGGATTTCTCGGAGTAG 58.625 45.833 4.69 1.09 0.00 2.57
665 689 5.378230 TGGTACTAGGATTTCTCGGAGTA 57.622 43.478 4.69 0.00 0.00 2.59
666 690 4.246712 TGGTACTAGGATTTCTCGGAGT 57.753 45.455 4.69 0.00 0.00 3.85
667 691 6.896021 TTATGGTACTAGGATTTCTCGGAG 57.104 41.667 0.00 0.00 0.00 4.63
668 692 6.436532 GGATTATGGTACTAGGATTTCTCGGA 59.563 42.308 0.00 0.00 0.00 4.55
669 693 6.625300 CGGATTATGGTACTAGGATTTCTCGG 60.625 46.154 0.00 0.00 0.00 4.63
670 694 6.072064 ACGGATTATGGTACTAGGATTTCTCG 60.072 42.308 0.00 0.00 0.00 4.04
671 695 7.091443 CACGGATTATGGTACTAGGATTTCTC 58.909 42.308 0.00 0.00 0.00 2.87
672 696 6.518537 GCACGGATTATGGTACTAGGATTTCT 60.519 42.308 0.00 0.00 0.00 2.52
673 697 5.638234 GCACGGATTATGGTACTAGGATTTC 59.362 44.000 0.00 0.00 0.00 2.17
674 698 5.071250 TGCACGGATTATGGTACTAGGATTT 59.929 40.000 0.00 0.00 0.00 2.17
675 699 4.591498 TGCACGGATTATGGTACTAGGATT 59.409 41.667 0.00 0.00 0.00 3.01
676 700 4.157246 TGCACGGATTATGGTACTAGGAT 58.843 43.478 0.00 0.00 0.00 3.24
677 701 3.568443 TGCACGGATTATGGTACTAGGA 58.432 45.455 0.00 0.00 0.00 2.94
678 702 4.330944 TTGCACGGATTATGGTACTAGG 57.669 45.455 0.00 0.00 0.00 3.02
679 703 5.462398 GTCTTTGCACGGATTATGGTACTAG 59.538 44.000 0.00 0.00 0.00 2.57
680 704 5.353938 GTCTTTGCACGGATTATGGTACTA 58.646 41.667 0.00 0.00 0.00 1.82
681 705 4.189231 GTCTTTGCACGGATTATGGTACT 58.811 43.478 0.00 0.00 0.00 2.73
682 706 3.000925 CGTCTTTGCACGGATTATGGTAC 59.999 47.826 0.00 0.00 36.07 3.34
683 707 3.191669 CGTCTTTGCACGGATTATGGTA 58.808 45.455 0.00 0.00 36.07 3.25
684 708 2.006888 CGTCTTTGCACGGATTATGGT 58.993 47.619 0.00 0.00 36.07 3.55
685 709 1.268032 GCGTCTTTGCACGGATTATGG 60.268 52.381 0.00 0.00 40.29 2.74
686 710 1.268032 GGCGTCTTTGCACGGATTATG 60.268 52.381 0.00 0.00 40.29 1.90
687 711 1.014352 GGCGTCTTTGCACGGATTAT 58.986 50.000 0.00 0.00 40.29 1.28
688 712 1.022451 GGGCGTCTTTGCACGGATTA 61.022 55.000 0.00 0.00 40.29 1.75
689 713 2.332654 GGGCGTCTTTGCACGGATT 61.333 57.895 0.00 0.00 40.29 3.01
690 714 2.746277 GGGCGTCTTTGCACGGAT 60.746 61.111 0.00 0.00 40.29 4.18
694 718 0.739813 ATCTACGGGCGTCTTTGCAC 60.740 55.000 0.00 0.00 36.28 4.57
695 719 0.036765 AATCTACGGGCGTCTTTGCA 60.037 50.000 0.00 0.00 36.28 4.08
696 720 0.651031 GAATCTACGGGCGTCTTTGC 59.349 55.000 0.00 0.00 0.00 3.68
697 721 2.004583 TGAATCTACGGGCGTCTTTG 57.995 50.000 0.00 0.00 0.00 2.77
698 722 2.936498 CAATGAATCTACGGGCGTCTTT 59.064 45.455 0.00 0.00 0.00 2.52
699 723 2.550978 CAATGAATCTACGGGCGTCTT 58.449 47.619 0.00 0.00 0.00 3.01
700 724 1.202533 CCAATGAATCTACGGGCGTCT 60.203 52.381 0.00 0.00 0.00 4.18
701 725 1.202486 TCCAATGAATCTACGGGCGTC 60.202 52.381 0.00 0.00 0.00 5.19
702 726 0.828022 TCCAATGAATCTACGGGCGT 59.172 50.000 0.00 0.00 0.00 5.68
703 727 1.217882 GTCCAATGAATCTACGGGCG 58.782 55.000 0.00 0.00 0.00 6.13
704 728 2.325583 TGTCCAATGAATCTACGGGC 57.674 50.000 0.00 0.00 0.00 6.13
985 1069 4.391869 CATCTGATGATGGGCGGG 57.608 61.111 12.27 0.00 44.63 6.13
1131 1226 3.793144 CACCGCAAGCGAGGAAGC 61.793 66.667 16.97 0.00 42.83 3.86
1146 1241 1.303317 ATCAGAACCCCAACCGCAC 60.303 57.895 0.00 0.00 0.00 5.34
1156 1251 1.680249 GGCAGGAACAGGATCAGAACC 60.680 57.143 0.00 0.00 0.00 3.62
1190 1285 2.338015 AATGCGCTTGTCCTGCAGG 61.338 57.895 27.87 27.87 42.65 4.85
1315 1414 0.827368 CCTCCTCTTCTTCTTCCCCG 59.173 60.000 0.00 0.00 0.00 5.73
1317 1416 2.437651 CCATCCTCCTCTTCTTCTTCCC 59.562 54.545 0.00 0.00 0.00 3.97
1318 1417 3.379452 TCCATCCTCCTCTTCTTCTTCC 58.621 50.000 0.00 0.00 0.00 3.46
1324 1423 2.117865 CAAGCTCCATCCTCCTCTTCT 58.882 52.381 0.00 0.00 0.00 2.85
1330 1429 2.194326 GCCCAAGCTCCATCCTCC 59.806 66.667 0.00 0.00 35.50 4.30
1377 1479 2.852075 TCTCCCACCACCACCACC 60.852 66.667 0.00 0.00 0.00 4.61
1378 1480 2.750350 CTCTCCCACCACCACCAC 59.250 66.667 0.00 0.00 0.00 4.16
1379 1481 3.249189 GCTCTCCCACCACCACCA 61.249 66.667 0.00 0.00 0.00 4.17
1483 1585 5.823570 AGTAGTCTAGAACTATGTCGTGCAT 59.176 40.000 0.00 1.49 42.38 3.96
1535 1652 5.656416 AGAAAGTCAAACAAGATCCACCAAA 59.344 36.000 0.00 0.00 0.00 3.28
1560 1677 1.214325 CGACCACCAGTGTCGCATA 59.786 57.895 0.00 0.00 33.86 3.14
1561 1678 2.048222 CGACCACCAGTGTCGCAT 60.048 61.111 0.00 0.00 33.86 4.73
1564 1681 2.049433 GACCGACCACCAGTGTCG 60.049 66.667 5.87 5.87 39.93 4.35
1566 1683 1.874345 GATCGACCGACCACCAGTGT 61.874 60.000 0.00 0.00 0.00 3.55
1603 1726 3.459232 TCATCATCTCCGGTCAACATC 57.541 47.619 0.00 0.00 0.00 3.06
1614 1737 7.201714 CCAAGTTCCTCAAGATTTCATCATCTC 60.202 40.741 0.00 0.00 31.87 2.75
1615 1738 6.602406 CCAAGTTCCTCAAGATTTCATCATCT 59.398 38.462 0.00 0.00 34.78 2.90
1638 1761 0.179040 GGAACAAGAACGGGACACCA 60.179 55.000 0.00 0.00 36.13 4.17
1674 1810 7.357287 GCAAACTCGTTACAAAAACTGATTAGC 60.357 37.037 0.00 0.00 0.00 3.09
1684 1820 2.419324 ACACCGCAAACTCGTTACAAAA 59.581 40.909 0.00 0.00 0.00 2.44
1685 1821 2.008329 ACACCGCAAACTCGTTACAAA 58.992 42.857 0.00 0.00 0.00 2.83
1686 1822 1.654317 ACACCGCAAACTCGTTACAA 58.346 45.000 0.00 0.00 0.00 2.41
1688 1824 1.593933 TCAACACCGCAAACTCGTTAC 59.406 47.619 0.00 0.00 0.00 2.50
1689 1825 1.937278 TCAACACCGCAAACTCGTTA 58.063 45.000 0.00 0.00 0.00 3.18
1701 1892 2.164827 TCTGCATTGCATGATCAACACC 59.835 45.455 12.53 0.00 38.13 4.16
1725 1916 0.035458 ACTGCTGGTTCCTTCCTTCG 59.965 55.000 0.00 0.00 0.00 3.79
1726 1917 2.278332 AACTGCTGGTTCCTTCCTTC 57.722 50.000 0.00 0.00 31.69 3.46
1733 1924 0.032540 CAGGCAAAACTGCTGGTTCC 59.967 55.000 0.00 0.00 37.12 3.62
1734 1925 0.746659 ACAGGCAAAACTGCTGGTTC 59.253 50.000 0.00 0.00 42.21 3.62
1735 1926 1.194218 AACAGGCAAAACTGCTGGTT 58.806 45.000 0.00 0.00 42.21 3.67
1736 1927 1.194218 AAACAGGCAAAACTGCTGGT 58.806 45.000 0.00 0.00 42.21 4.00
1739 1930 3.002102 CAACAAAACAGGCAAAACTGCT 58.998 40.909 0.00 0.00 42.21 4.24
1741 1932 3.002102 AGCAACAAAACAGGCAAAACTG 58.998 40.909 0.00 0.00 44.03 3.16
1742 1933 3.333029 AGCAACAAAACAGGCAAAACT 57.667 38.095 0.00 0.00 0.00 2.66
1743 1934 3.001228 GCTAGCAACAAAACAGGCAAAAC 59.999 43.478 10.63 0.00 0.00 2.43
1744 1935 3.118811 AGCTAGCAACAAAACAGGCAAAA 60.119 39.130 18.83 0.00 0.00 2.44
1752 1943 5.234972 AGCATGAAAAAGCTAGCAACAAAAC 59.765 36.000 18.83 2.68 39.78 2.43
1758 1949 4.074259 TGAGAGCATGAAAAAGCTAGCAA 58.926 39.130 18.83 0.00 42.04 3.91
1761 1952 6.618811 ACAAATGAGAGCATGAAAAAGCTAG 58.381 36.000 0.00 0.00 42.04 3.42
1769 1960 5.005740 ACTTGCTACAAATGAGAGCATGAA 58.994 37.500 22.12 8.60 45.20 2.57
1790 1981 4.018960 ACCCAGAGATCAAATTACAGCACT 60.019 41.667 0.00 0.00 0.00 4.40
1794 1985 6.543831 CCCTAAACCCAGAGATCAAATTACAG 59.456 42.308 0.00 0.00 0.00 2.74
1795 1986 6.423182 CCCTAAACCCAGAGATCAAATTACA 58.577 40.000 0.00 0.00 0.00 2.41
1804 2010 2.208872 ACATGCCCTAAACCCAGAGAT 58.791 47.619 0.00 0.00 0.00 2.75
1806 2012 2.493278 CAAACATGCCCTAAACCCAGAG 59.507 50.000 0.00 0.00 0.00 3.35
1816 2022 2.028561 ATTGGAACCAAACATGCCCT 57.971 45.000 10.36 0.00 39.55 5.19
1817 2023 3.260632 ACTTATTGGAACCAAACATGCCC 59.739 43.478 10.36 0.00 39.55 5.36
1818 2024 4.021544 TGACTTATTGGAACCAAACATGCC 60.022 41.667 10.36 0.64 39.55 4.40
1819 2025 5.132897 TGACTTATTGGAACCAAACATGC 57.867 39.130 10.36 2.16 39.55 4.06
1820 2026 7.031372 CAGATGACTTATTGGAACCAAACATG 58.969 38.462 10.36 6.63 39.55 3.21
1821 2027 6.947733 TCAGATGACTTATTGGAACCAAACAT 59.052 34.615 10.36 10.42 39.55 2.71
1822 2028 6.206634 GTCAGATGACTTATTGGAACCAAACA 59.793 38.462 10.36 6.76 41.65 2.83
1823 2029 6.612306 GTCAGATGACTTATTGGAACCAAAC 58.388 40.000 10.36 0.00 41.65 2.93
1824 2030 6.817765 GTCAGATGACTTATTGGAACCAAA 57.182 37.500 10.36 0.00 41.65 3.28
1854 2060 7.964604 AATCACTAGTTTTAAGTCACCTGAC 57.035 36.000 0.00 0.00 45.08 3.51
1866 2072 9.686683 AGGCATGACTTATAAATCACTAGTTTT 57.313 29.630 0.00 0.00 0.00 2.43
1867 2073 9.113838 CAGGCATGACTTATAAATCACTAGTTT 57.886 33.333 0.00 0.00 0.00 2.66
1868 2074 8.267894 ACAGGCATGACTTATAAATCACTAGTT 58.732 33.333 4.84 0.00 0.00 2.24
1869 2075 7.796054 ACAGGCATGACTTATAAATCACTAGT 58.204 34.615 4.84 0.00 0.00 2.57
1870 2076 8.668510 AACAGGCATGACTTATAAATCACTAG 57.331 34.615 4.84 0.00 0.00 2.57
1871 2077 8.892723 CAAACAGGCATGACTTATAAATCACTA 58.107 33.333 4.84 0.00 0.00 2.74
1872 2078 7.611467 TCAAACAGGCATGACTTATAAATCACT 59.389 33.333 4.84 0.00 0.00 3.41
1873 2079 7.761409 TCAAACAGGCATGACTTATAAATCAC 58.239 34.615 4.84 0.00 0.00 3.06
1874 2080 7.936496 TCAAACAGGCATGACTTATAAATCA 57.064 32.000 4.84 0.00 0.00 2.57
1875 2081 9.241317 CAATCAAACAGGCATGACTTATAAATC 57.759 33.333 4.84 0.00 0.00 2.17
1876 2082 8.752187 ACAATCAAACAGGCATGACTTATAAAT 58.248 29.630 4.84 0.00 0.00 1.40
1877 2083 8.121305 ACAATCAAACAGGCATGACTTATAAA 57.879 30.769 4.84 0.00 0.00 1.40
1878 2084 7.392953 TGACAATCAAACAGGCATGACTTATAA 59.607 33.333 4.84 0.00 0.00 0.98
1879 2085 6.883756 TGACAATCAAACAGGCATGACTTATA 59.116 34.615 4.84 0.00 0.00 0.98
1880 2086 5.711506 TGACAATCAAACAGGCATGACTTAT 59.288 36.000 4.84 0.00 0.00 1.73
1881 2087 5.048782 GTGACAATCAAACAGGCATGACTTA 60.049 40.000 4.84 0.00 0.00 2.24
1882 2088 3.890756 TGACAATCAAACAGGCATGACTT 59.109 39.130 4.84 0.00 0.00 3.01
1883 2089 3.254166 GTGACAATCAAACAGGCATGACT 59.746 43.478 4.84 0.00 0.00 3.41
1884 2090 3.568538 GTGACAATCAAACAGGCATGAC 58.431 45.455 4.84 0.00 0.00 3.06
1885 2091 2.557924 GGTGACAATCAAACAGGCATGA 59.442 45.455 4.84 0.00 0.00 3.07
1886 2092 2.559668 AGGTGACAATCAAACAGGCATG 59.440 45.455 0.00 0.00 0.00 4.06
1887 2093 2.559668 CAGGTGACAATCAAACAGGCAT 59.440 45.455 0.00 0.00 0.00 4.40
1888 2094 1.955778 CAGGTGACAATCAAACAGGCA 59.044 47.619 0.00 0.00 0.00 4.75
1889 2095 2.229792 TCAGGTGACAATCAAACAGGC 58.770 47.619 0.00 0.00 0.00 4.85
1890 2096 5.458041 AAATCAGGTGACAATCAAACAGG 57.542 39.130 0.00 0.00 0.00 4.00
1891 2097 9.778993 CTTATAAATCAGGTGACAATCAAACAG 57.221 33.333 0.00 0.00 0.00 3.16
1892 2098 9.295825 ACTTATAAATCAGGTGACAATCAAACA 57.704 29.630 0.00 0.00 0.00 2.83
1893 2099 9.774742 GACTTATAAATCAGGTGACAATCAAAC 57.225 33.333 0.00 0.00 0.00 2.93
1894 2100 9.513906 TGACTTATAAATCAGGTGACAATCAAA 57.486 29.630 0.00 0.00 0.00 2.69
1895 2101 9.685276 ATGACTTATAAATCAGGTGACAATCAA 57.315 29.630 2.76 0.00 0.00 2.57
1896 2102 9.330063 GATGACTTATAAATCAGGTGACAATCA 57.670 33.333 2.76 0.00 0.00 2.57
1897 2103 9.553064 AGATGACTTATAAATCAGGTGACAATC 57.447 33.333 2.76 0.00 0.00 2.67
1898 2104 9.334947 CAGATGACTTATAAATCAGGTGACAAT 57.665 33.333 2.76 0.00 0.00 2.71
1899 2105 8.539544 TCAGATGACTTATAAATCAGGTGACAA 58.460 33.333 2.76 0.00 0.00 3.18
1900 2106 8.078060 TCAGATGACTTATAAATCAGGTGACA 57.922 34.615 2.76 0.00 0.00 3.58
1901 2107 7.170658 GCTCAGATGACTTATAAATCAGGTGAC 59.829 40.741 2.76 1.03 0.00 3.67
1902 2108 7.147672 TGCTCAGATGACTTATAAATCAGGTGA 60.148 37.037 2.76 6.76 0.00 4.02
1903 2109 6.988580 TGCTCAGATGACTTATAAATCAGGTG 59.011 38.462 2.76 2.98 0.00 4.00
1904 2110 6.989169 GTGCTCAGATGACTTATAAATCAGGT 59.011 38.462 2.76 0.00 0.00 4.00
1905 2111 6.988580 TGTGCTCAGATGACTTATAAATCAGG 59.011 38.462 2.76 0.00 0.00 3.86
1906 2112 7.042187 GGTGTGCTCAGATGACTTATAAATCAG 60.042 40.741 2.76 0.00 0.00 2.90
1907 2113 6.763135 GGTGTGCTCAGATGACTTATAAATCA 59.237 38.462 0.00 0.00 0.00 2.57
1908 2114 6.989169 AGGTGTGCTCAGATGACTTATAAATC 59.011 38.462 0.00 0.00 0.00 2.17
1909 2115 6.893583 AGGTGTGCTCAGATGACTTATAAAT 58.106 36.000 0.00 0.00 0.00 1.40
1910 2116 6.299805 AGGTGTGCTCAGATGACTTATAAA 57.700 37.500 0.00 0.00 0.00 1.40
1911 2117 5.939764 AGGTGTGCTCAGATGACTTATAA 57.060 39.130 0.00 0.00 0.00 0.98
1912 2118 5.163405 GGAAGGTGTGCTCAGATGACTTATA 60.163 44.000 0.00 0.00 0.00 0.98
1913 2119 4.383552 GGAAGGTGTGCTCAGATGACTTAT 60.384 45.833 0.00 0.00 0.00 1.73
1914 2120 3.055819 GGAAGGTGTGCTCAGATGACTTA 60.056 47.826 0.00 0.00 0.00 2.24
1915 2121 2.289945 GGAAGGTGTGCTCAGATGACTT 60.290 50.000 0.00 0.00 0.00 3.01
1916 2122 1.277557 GGAAGGTGTGCTCAGATGACT 59.722 52.381 0.00 0.00 0.00 3.41
1917 2123 1.677217 GGGAAGGTGTGCTCAGATGAC 60.677 57.143 0.00 0.00 0.00 3.06
1918 2124 0.615331 GGGAAGGTGTGCTCAGATGA 59.385 55.000 0.00 0.00 0.00 2.92
1919 2125 0.325933 TGGGAAGGTGTGCTCAGATG 59.674 55.000 0.00 0.00 0.00 2.90
1920 2126 1.211457 GATGGGAAGGTGTGCTCAGAT 59.789 52.381 0.00 0.00 0.00 2.90
1921 2127 0.615331 GATGGGAAGGTGTGCTCAGA 59.385 55.000 0.00 0.00 0.00 3.27
1922 2128 0.617413 AGATGGGAAGGTGTGCTCAG 59.383 55.000 0.00 0.00 0.00 3.35
1923 2129 1.067295 AAGATGGGAAGGTGTGCTCA 58.933 50.000 0.00 0.00 0.00 4.26
1924 2130 1.457346 CAAGATGGGAAGGTGTGCTC 58.543 55.000 0.00 0.00 0.00 4.26
1925 2131 0.610232 GCAAGATGGGAAGGTGTGCT 60.610 55.000 0.00 0.00 0.00 4.40
1926 2132 0.610232 AGCAAGATGGGAAGGTGTGC 60.610 55.000 0.00 0.00 0.00 4.57
1927 2133 1.915141 AAGCAAGATGGGAAGGTGTG 58.085 50.000 0.00 0.00 0.00 3.82
1928 2134 2.683211 AAAGCAAGATGGGAAGGTGT 57.317 45.000 0.00 0.00 0.00 4.16
1929 2135 5.047092 ACATAAAAAGCAAGATGGGAAGGTG 60.047 40.000 0.00 0.00 0.00 4.00
1930 2136 5.086621 ACATAAAAAGCAAGATGGGAAGGT 58.913 37.500 0.00 0.00 0.00 3.50
1931 2137 5.665916 ACATAAAAAGCAAGATGGGAAGG 57.334 39.130 0.00 0.00 0.00 3.46
1932 2138 7.761249 CCTTTACATAAAAAGCAAGATGGGAAG 59.239 37.037 0.00 0.00 35.53 3.46
1933 2139 7.234577 ACCTTTACATAAAAAGCAAGATGGGAA 59.765 33.333 0.00 0.00 35.53 3.97
1934 2140 6.723977 ACCTTTACATAAAAAGCAAGATGGGA 59.276 34.615 0.00 0.00 35.53 4.37
1935 2141 6.813152 CACCTTTACATAAAAAGCAAGATGGG 59.187 38.462 0.00 0.00 35.53 4.00
1936 2142 7.601856 TCACCTTTACATAAAAAGCAAGATGG 58.398 34.615 0.00 0.00 35.53 3.51
1937 2143 9.079833 CATCACCTTTACATAAAAAGCAAGATG 57.920 33.333 0.00 0.00 35.53 2.90
1938 2144 8.253113 CCATCACCTTTACATAAAAAGCAAGAT 58.747 33.333 0.00 0.00 35.53 2.40
1939 2145 7.309744 CCCATCACCTTTACATAAAAAGCAAGA 60.310 37.037 0.00 0.00 35.53 3.02
1940 2146 6.813152 CCCATCACCTTTACATAAAAAGCAAG 59.187 38.462 0.00 0.00 35.53 4.01
1941 2147 6.495181 TCCCATCACCTTTACATAAAAAGCAA 59.505 34.615 0.00 0.00 35.53 3.91
1942 2148 6.013379 TCCCATCACCTTTACATAAAAAGCA 58.987 36.000 0.00 0.00 35.53 3.91
1943 2149 6.152831 AGTCCCATCACCTTTACATAAAAAGC 59.847 38.462 0.00 0.00 35.53 3.51
1944 2150 7.393234 TGAGTCCCATCACCTTTACATAAAAAG 59.607 37.037 0.00 0.00 36.43 2.27
1945 2151 7.235079 TGAGTCCCATCACCTTTACATAAAAA 58.765 34.615 0.00 0.00 0.00 1.94
1946 2152 6.785076 TGAGTCCCATCACCTTTACATAAAA 58.215 36.000 0.00 0.00 0.00 1.52
1947 2153 6.381498 TGAGTCCCATCACCTTTACATAAA 57.619 37.500 0.00 0.00 0.00 1.40
1948 2154 6.356556 CATGAGTCCCATCACCTTTACATAA 58.643 40.000 0.00 0.00 31.94 1.90
1949 2155 5.687441 GCATGAGTCCCATCACCTTTACATA 60.687 44.000 0.00 0.00 31.94 2.29
1950 2156 4.785301 CATGAGTCCCATCACCTTTACAT 58.215 43.478 0.00 0.00 31.94 2.29
1951 2157 3.622206 GCATGAGTCCCATCACCTTTACA 60.622 47.826 0.00 0.00 31.94 2.41
1952 2158 2.945668 GCATGAGTCCCATCACCTTTAC 59.054 50.000 0.00 0.00 31.94 2.01
1953 2159 2.575735 TGCATGAGTCCCATCACCTTTA 59.424 45.455 0.00 0.00 31.94 1.85
1954 2160 1.355381 TGCATGAGTCCCATCACCTTT 59.645 47.619 0.00 0.00 31.94 3.11
1955 2161 0.994247 TGCATGAGTCCCATCACCTT 59.006 50.000 0.00 0.00 31.94 3.50
1956 2162 0.994247 TTGCATGAGTCCCATCACCT 59.006 50.000 0.00 0.00 31.94 4.00
1957 2163 1.838112 TTTGCATGAGTCCCATCACC 58.162 50.000 0.00 0.00 31.94 4.02
1958 2164 3.084039 TCTTTTGCATGAGTCCCATCAC 58.916 45.455 0.00 0.00 31.94 3.06
1959 2165 3.349927 CTCTTTTGCATGAGTCCCATCA 58.650 45.455 0.00 0.00 31.94 3.07
1960 2166 2.686915 CCTCTTTTGCATGAGTCCCATC 59.313 50.000 0.00 0.00 31.94 3.51
1961 2167 2.622452 CCCTCTTTTGCATGAGTCCCAT 60.622 50.000 0.00 0.00 35.44 4.00
1962 2168 1.272092 CCCTCTTTTGCATGAGTCCCA 60.272 52.381 0.00 0.00 0.00 4.37
1963 2169 1.272147 ACCCTCTTTTGCATGAGTCCC 60.272 52.381 0.00 0.00 0.00 4.46
1964 2170 1.815003 CACCCTCTTTTGCATGAGTCC 59.185 52.381 0.00 0.00 0.00 3.85
1965 2171 2.485814 GTCACCCTCTTTTGCATGAGTC 59.514 50.000 0.00 0.00 0.00 3.36
1966 2172 2.107204 AGTCACCCTCTTTTGCATGAGT 59.893 45.455 0.00 0.00 0.00 3.41
1967 2173 2.787994 AGTCACCCTCTTTTGCATGAG 58.212 47.619 0.00 0.00 0.00 2.90
1968 2174 2.957402 AGTCACCCTCTTTTGCATGA 57.043 45.000 0.00 0.00 0.00 3.07
1969 2175 6.375455 ACTTATAAGTCACCCTCTTTTGCATG 59.625 38.462 12.50 0.00 32.86 4.06
1970 2176 6.485171 ACTTATAAGTCACCCTCTTTTGCAT 58.515 36.000 12.50 0.00 32.86 3.96
1971 2177 5.876357 ACTTATAAGTCACCCTCTTTTGCA 58.124 37.500 12.50 0.00 32.86 4.08
1972 2178 6.819397 AACTTATAAGTCACCCTCTTTTGC 57.181 37.500 18.28 0.00 38.57 3.68
1977 2183 9.503399 CAACTTAAAACTTATAAGTCACCCTCT 57.497 33.333 18.28 0.00 41.49 3.69
1978 2184 8.727910 CCAACTTAAAACTTATAAGTCACCCTC 58.272 37.037 18.28 0.00 41.49 4.30
1979 2185 7.668469 CCCAACTTAAAACTTATAAGTCACCCT 59.332 37.037 18.28 0.00 41.49 4.34
1980 2186 7.094075 CCCCAACTTAAAACTTATAAGTCACCC 60.094 40.741 18.28 0.00 41.49 4.61
1981 2187 7.449395 ACCCCAACTTAAAACTTATAAGTCACC 59.551 37.037 18.28 0.00 41.49 4.02
1982 2188 8.294577 CACCCCAACTTAAAACTTATAAGTCAC 58.705 37.037 18.28 0.00 41.49 3.67
1983 2189 7.449086 CCACCCCAACTTAAAACTTATAAGTCA 59.551 37.037 18.28 4.72 41.49 3.41
1984 2190 7.666804 TCCACCCCAACTTAAAACTTATAAGTC 59.333 37.037 18.28 0.00 41.49 3.01
1985 2191 7.528675 TCCACCCCAACTTAAAACTTATAAGT 58.471 34.615 12.50 12.50 43.57 2.24
1986 2192 7.362660 GCTCCACCCCAACTTAAAACTTATAAG 60.363 40.741 11.05 11.05 36.62 1.73
1987 2193 6.434965 GCTCCACCCCAACTTAAAACTTATAA 59.565 38.462 0.00 0.00 0.00 0.98
1988 2194 5.947566 GCTCCACCCCAACTTAAAACTTATA 59.052 40.000 0.00 0.00 0.00 0.98
1989 2195 4.770531 GCTCCACCCCAACTTAAAACTTAT 59.229 41.667 0.00 0.00 0.00 1.73
1990 2196 4.146564 GCTCCACCCCAACTTAAAACTTA 58.853 43.478 0.00 0.00 0.00 2.24
1991 2197 2.963101 GCTCCACCCCAACTTAAAACTT 59.037 45.455 0.00 0.00 0.00 2.66
1992 2198 2.091555 TGCTCCACCCCAACTTAAAACT 60.092 45.455 0.00 0.00 0.00 2.66
1993 2199 2.312390 TGCTCCACCCCAACTTAAAAC 58.688 47.619 0.00 0.00 0.00 2.43
1994 2200 2.757894 TGCTCCACCCCAACTTAAAA 57.242 45.000 0.00 0.00 0.00 1.52
1995 2201 2.757894 TTGCTCCACCCCAACTTAAA 57.242 45.000 0.00 0.00 0.00 1.52
1996 2202 2.990740 ATTGCTCCACCCCAACTTAA 57.009 45.000 0.00 0.00 0.00 1.85
1997 2203 2.990740 AATTGCTCCACCCCAACTTA 57.009 45.000 0.00 0.00 0.00 2.24
1998 2204 2.101640 AAATTGCTCCACCCCAACTT 57.898 45.000 0.00 0.00 0.00 2.66
1999 2205 2.990740 TAAATTGCTCCACCCCAACT 57.009 45.000 0.00 0.00 0.00 3.16
2000 2206 3.096092 TCATAAATTGCTCCACCCCAAC 58.904 45.455 0.00 0.00 0.00 3.77
2001 2207 3.096092 GTCATAAATTGCTCCACCCCAA 58.904 45.455 0.00 0.00 0.00 4.12
2002 2208 2.311542 AGTCATAAATTGCTCCACCCCA 59.688 45.455 0.00 0.00 0.00 4.96
2003 2209 3.018423 AGTCATAAATTGCTCCACCCC 57.982 47.619 0.00 0.00 0.00 4.95
2004 2210 7.502561 ACTTATAAGTCATAAATTGCTCCACCC 59.497 37.037 12.50 0.00 32.86 4.61
2005 2211 8.451908 ACTTATAAGTCATAAATTGCTCCACC 57.548 34.615 12.50 0.00 32.86 4.61
2006 2212 9.722056 CAACTTATAAGTCATAAATTGCTCCAC 57.278 33.333 18.28 0.00 38.57 4.02
2007 2213 8.902806 CCAACTTATAAGTCATAAATTGCTCCA 58.097 33.333 18.28 0.00 35.79 3.86
2008 2214 8.352942 CCCAACTTATAAGTCATAAATTGCTCC 58.647 37.037 18.28 0.00 35.79 4.70
2009 2215 8.903820 ACCCAACTTATAAGTCATAAATTGCTC 58.096 33.333 18.28 0.00 35.79 4.26
2010 2216 8.823220 ACCCAACTTATAAGTCATAAATTGCT 57.177 30.769 18.28 0.00 35.79 3.91
2011 2217 8.903820 AGACCCAACTTATAAGTCATAAATTGC 58.096 33.333 18.28 3.37 35.79 3.56
2013 2219 9.975218 ACAGACCCAACTTATAAGTCATAAATT 57.025 29.630 18.28 0.00 38.57 1.82
2014 2220 9.975218 AACAGACCCAACTTATAAGTCATAAAT 57.025 29.630 18.28 0.00 38.57 1.40
2015 2221 9.802039 AAACAGACCCAACTTATAAGTCATAAA 57.198 29.630 18.28 0.00 38.57 1.40
2018 2224 7.553044 GCTAAACAGACCCAACTTATAAGTCAT 59.447 37.037 18.28 1.19 38.57 3.06
2019 2225 6.877322 GCTAAACAGACCCAACTTATAAGTCA 59.123 38.462 18.28 0.00 38.57 3.41
2020 2226 6.877322 TGCTAAACAGACCCAACTTATAAGTC 59.123 38.462 18.28 6.18 38.57 3.01
2021 2227 6.775708 TGCTAAACAGACCCAACTTATAAGT 58.224 36.000 12.50 12.50 42.04 2.24
2022 2228 7.681939 TTGCTAAACAGACCCAACTTATAAG 57.318 36.000 11.05 11.05 0.00 1.73
2023 2229 8.466617 TTTTGCTAAACAGACCCAACTTATAA 57.533 30.769 0.00 0.00 0.00 0.98
2024 2230 8.644374 ATTTTGCTAAACAGACCCAACTTATA 57.356 30.769 0.00 0.00 0.00 0.98
2025 2231 6.969993 TTTTGCTAAACAGACCCAACTTAT 57.030 33.333 0.00 0.00 0.00 1.73
2026 2232 6.969993 ATTTTGCTAAACAGACCCAACTTA 57.030 33.333 0.00 0.00 0.00 2.24
2027 2233 5.869649 ATTTTGCTAAACAGACCCAACTT 57.130 34.783 0.00 0.00 0.00 2.66
2028 2234 6.549736 ACTTATTTTGCTAAACAGACCCAACT 59.450 34.615 8.15 0.00 0.00 3.16
2029 2235 6.745116 ACTTATTTTGCTAAACAGACCCAAC 58.255 36.000 8.15 0.00 0.00 3.77
2030 2236 6.547880 TGACTTATTTTGCTAAACAGACCCAA 59.452 34.615 8.15 0.00 0.00 4.12
2031 2237 6.065374 TGACTTATTTTGCTAAACAGACCCA 58.935 36.000 8.15 2.51 0.00 4.51
2032 2238 6.569179 TGACTTATTTTGCTAAACAGACCC 57.431 37.500 8.15 0.64 0.00 4.46
2033 2239 9.476202 AAAATGACTTATTTTGCTAAACAGACC 57.524 29.630 8.15 2.39 44.98 3.85
2064 2270 7.170998 AGTCACCAACTTATAAGTCGAAAAGTG 59.829 37.037 18.28 16.78 38.57 3.16
2066 2272 7.653767 AGTCACCAACTTATAAGTCGAAAAG 57.346 36.000 18.28 7.33 38.57 2.27
2083 2289 8.354426 GCCTGTTTAGTTTTAAATAAGTCACCA 58.646 33.333 0.00 0.00 31.81 4.17
2084 2290 7.811236 GGCCTGTTTAGTTTTAAATAAGTCACC 59.189 37.037 0.00 0.00 31.81 4.02
2086 2292 7.726738 AGGGCCTGTTTAGTTTTAAATAAGTCA 59.273 33.333 4.50 0.00 31.81 3.41
2087 2293 8.118976 AGGGCCTGTTTAGTTTTAAATAAGTC 57.881 34.615 4.50 0.00 31.81 3.01
2091 2297 9.590828 AGTTAAGGGCCTGTTTAGTTTTAAATA 57.409 29.630 6.92 0.00 31.81 1.40
2092 2298 8.364894 CAGTTAAGGGCCTGTTTAGTTTTAAAT 58.635 33.333 6.92 0.00 31.81 1.40
2093 2299 7.684913 GCAGTTAAGGGCCTGTTTAGTTTTAAA 60.685 37.037 6.92 0.00 0.00 1.52
2094 2300 6.239092 GCAGTTAAGGGCCTGTTTAGTTTTAA 60.239 38.462 6.92 0.00 0.00 1.52
2095 2301 5.242171 GCAGTTAAGGGCCTGTTTAGTTTTA 59.758 40.000 6.92 0.00 0.00 1.52
2096 2302 4.038763 GCAGTTAAGGGCCTGTTTAGTTTT 59.961 41.667 6.92 0.00 0.00 2.43
2098 2304 3.154710 GCAGTTAAGGGCCTGTTTAGTT 58.845 45.455 6.92 0.00 0.00 2.24
2099 2305 2.554564 GGCAGTTAAGGGCCTGTTTAGT 60.555 50.000 6.92 0.00 46.74 2.24
2100 2306 2.092323 GGCAGTTAAGGGCCTGTTTAG 58.908 52.381 6.92 0.00 46.74 1.85
2101 2307 2.209690 GGCAGTTAAGGGCCTGTTTA 57.790 50.000 6.92 0.00 46.74 2.01
2108 2314 1.404035 CAAATACGGGCAGTTAAGGGC 59.596 52.381 0.00 0.00 0.00 5.19
2109 2315 2.943033 CTCAAATACGGGCAGTTAAGGG 59.057 50.000 0.00 0.00 0.00 3.95
2110 2316 3.621715 GTCTCAAATACGGGCAGTTAAGG 59.378 47.826 0.00 0.00 0.00 2.69
2119 3380 4.994852 TCAAGTCAAAGTCTCAAATACGGG 59.005 41.667 0.00 0.00 0.00 5.28
2124 3385 6.352516 ACAGAGTCAAGTCAAAGTCTCAAAT 58.647 36.000 0.00 0.00 0.00 2.32
2139 3403 3.385433 TCTTGTCCGGTTTACAGAGTCAA 59.615 43.478 0.00 0.00 0.00 3.18
2140 3404 2.960384 TCTTGTCCGGTTTACAGAGTCA 59.040 45.455 0.00 0.00 0.00 3.41
2170 3434 1.729149 CGCGAAACAAGGAATCCAAGC 60.729 52.381 0.00 0.00 0.00 4.01
2171 3435 1.135689 CCGCGAAACAAGGAATCCAAG 60.136 52.381 8.23 0.00 0.00 3.61
2178 3470 3.048337 AGAATTACCGCGAAACAAGGA 57.952 42.857 8.23 0.00 0.00 3.36
2188 3480 7.704472 CAGGATCTAGATCAATAGAATTACCGC 59.296 40.741 29.33 10.46 39.54 5.68
2196 3488 9.249053 GGATTGTACAGGATCTAGATCAATAGA 57.751 37.037 29.33 15.80 39.54 1.98
2197 3489 9.029368 TGGATTGTACAGGATCTAGATCAATAG 57.971 37.037 29.33 18.78 39.54 1.73
2198 3490 8.956446 TGGATTGTACAGGATCTAGATCAATA 57.044 34.615 29.33 17.07 39.54 1.90
2233 3540 1.407258 CCTTTCACAGCCGTTTCCAAA 59.593 47.619 0.00 0.00 0.00 3.28
2247 3554 5.456921 AATAAATGCCTCCTCTCCTTTCA 57.543 39.130 0.00 0.00 0.00 2.69
2248 3555 6.488344 CCTAAATAAATGCCTCCTCTCCTTTC 59.512 42.308 0.00 0.00 0.00 2.62
2256 3563 2.158310 GGCCCCTAAATAAATGCCTCCT 60.158 50.000 0.00 0.00 35.99 3.69
2273 3580 2.622962 CGTTTCCAAGGAACGGCCC 61.623 63.158 0.00 0.00 37.37 5.80
2274 3581 1.848932 GACGTTTCCAAGGAACGGCC 61.849 60.000 19.94 0.00 33.70 6.13
2308 3619 1.867233 CCCACACGAGTAGCATATTGC 59.133 52.381 0.00 0.00 45.46 3.56
2309 3620 2.483876 CCCCACACGAGTAGCATATTG 58.516 52.381 0.00 0.00 0.00 1.90
2310 3621 1.416401 CCCCCACACGAGTAGCATATT 59.584 52.381 0.00 0.00 0.00 1.28
2311 3622 1.048601 CCCCCACACGAGTAGCATAT 58.951 55.000 0.00 0.00 0.00 1.78
2312 3623 2.511818 CCCCCACACGAGTAGCATA 58.488 57.895 0.00 0.00 0.00 3.14
2313 3624 3.309582 CCCCCACACGAGTAGCAT 58.690 61.111 0.00 0.00 0.00 3.79
2341 3652 0.038166 GCATGACAGGGGGAAGAACA 59.962 55.000 0.00 0.00 0.00 3.18
2404 3721 7.769272 TTCAATTTTTGACAGGACAATTCAC 57.231 32.000 0.00 0.00 39.87 3.18
2456 3776 0.397941 TAAGTTGGACTGCTGCTGCT 59.602 50.000 17.00 0.00 40.48 4.24
2459 3779 1.140852 TGTGTAAGTTGGACTGCTGCT 59.859 47.619 0.00 0.00 0.00 4.24
2460 3780 1.264288 GTGTGTAAGTTGGACTGCTGC 59.736 52.381 0.00 0.00 0.00 5.25
2461 3781 2.560504 TGTGTGTAAGTTGGACTGCTG 58.439 47.619 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.