Multiple sequence alignment - TraesCS4A01G291200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G291200 chr4A 100.000 2495 0 0 1 2495 594426650 594429144 0.000000e+00 4608
1 TraesCS4A01G291200 chr4A 99.340 303 2 0 1 303 63806123 63806425 1.300000e-152 549
2 TraesCS4A01G291200 chr4B 85.475 1907 142 72 529 2387 16872257 16870438 0.000000e+00 1862
3 TraesCS4A01G291200 chr4B 99.340 303 2 0 1 303 13402454 13402152 1.300000e-152 549
4 TraesCS4A01G291200 chr4B 85.455 110 15 1 360 469 16872771 16872663 2.030000e-21 113
5 TraesCS4A01G291200 chr4D 91.483 1315 86 16 529 1831 8930734 8929434 0.000000e+00 1784
6 TraesCS4A01G291200 chr4D 92.412 514 23 9 1849 2359 8929384 8928884 0.000000e+00 719
7 TraesCS4A01G291200 chr6B 99.670 303 1 0 1 303 171193742 171194044 2.800000e-154 555
8 TraesCS4A01G291200 chr2B 99.340 303 2 0 1 303 216961833 216962135 1.300000e-152 549
9 TraesCS4A01G291200 chr2B 99.010 303 3 0 1 303 160697458 160697156 6.070000e-151 544
10 TraesCS4A01G291200 chr2B 97.143 70 0 1 2383 2450 721695422 721695353 1.570000e-22 117
11 TraesCS4A01G291200 chr5A 99.336 301 2 0 3 303 2822165 2822465 1.690000e-151 545
12 TraesCS4A01G291200 chr6A 99.010 303 3 0 1 303 445567169 445566867 6.070000e-151 544
13 TraesCS4A01G291200 chr3B 99.010 303 3 0 1 303 224833201 224833503 6.070000e-151 544
14 TraesCS4A01G291200 chr3B 100.000 64 0 0 2387 2450 27513581 27513644 4.360000e-23 119
15 TraesCS4A01G291200 chr3B 100.000 64 0 0 2387 2450 92330447 92330384 4.360000e-23 119
16 TraesCS4A01G291200 chr7A 98.680 303 4 0 1 303 98759151 98759453 2.820000e-149 538
17 TraesCS4A01G291200 chr7A 100.000 64 0 0 2387 2450 144167233 144167170 4.360000e-23 119
18 TraesCS4A01G291200 chr2A 100.000 65 0 0 2386 2450 138922377 138922441 1.210000e-23 121
19 TraesCS4A01G291200 chr1D 98.529 68 1 0 2383 2450 66381023 66380956 1.210000e-23 121
20 TraesCS4A01G291200 chr1B 100.000 64 0 0 2387 2450 67533574 67533511 4.360000e-23 119
21 TraesCS4A01G291200 chr1B 98.485 66 1 0 2385 2450 453521960 453522025 1.570000e-22 117
22 TraesCS4A01G291200 chr3A 100.000 63 0 0 2388 2450 699768735 699768673 1.570000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G291200 chr4A 594426650 594429144 2494 False 4608.0 4608 100.0000 1 2495 1 chr4A.!!$F2 2494
1 TraesCS4A01G291200 chr4B 16870438 16872771 2333 True 987.5 1862 85.4650 360 2387 2 chr4B.!!$R2 2027
2 TraesCS4A01G291200 chr4D 8928884 8930734 1850 True 1251.5 1784 91.9475 529 2359 2 chr4D.!!$R1 1830

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.039165 CTTTTCTCACCTTTGCCCGC 60.039 55.0 0.0 0.0 0.00 6.13 F
215 216 0.040204 CCCACCCATGAAGGAAGCTT 59.960 55.0 0.0 0.0 41.22 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1044 1404 0.388907 TCGTTCCGAACCCGTCATTC 60.389 55.000 5.67 0.0 31.06 2.67 R
2105 2534 1.064952 GGGCCGCACATTACATTACAC 59.935 52.381 0.00 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.318576 ACTTTTCTCACCTTTGCCCG 58.681 50.000 0.00 0.00 0.00 6.13
20 21 0.039165 CTTTTCTCACCTTTGCCCGC 60.039 55.000 0.00 0.00 0.00 6.13
21 22 0.753479 TTTTCTCACCTTTGCCCGCA 60.753 50.000 0.00 0.00 0.00 5.69
22 23 0.753479 TTTCTCACCTTTGCCCGCAA 60.753 50.000 0.00 0.00 0.00 4.85
23 24 0.539438 TTCTCACCTTTGCCCGCAAT 60.539 50.000 2.42 0.00 35.70 3.56
24 25 1.213537 CTCACCTTTGCCCGCAATG 59.786 57.895 2.42 5.68 35.70 2.82
25 26 2.432972 CACCTTTGCCCGCAATGC 60.433 61.111 2.42 0.00 35.70 3.56
26 27 3.694538 ACCTTTGCCCGCAATGCC 61.695 61.111 2.42 0.00 35.70 4.40
27 28 4.455906 CCTTTGCCCGCAATGCCC 62.456 66.667 2.42 0.00 35.70 5.36
28 29 3.693471 CTTTGCCCGCAATGCCCA 61.693 61.111 2.42 0.00 35.70 5.36
29 30 3.938019 CTTTGCCCGCAATGCCCAC 62.938 63.158 2.42 0.00 35.70 4.61
30 31 4.992740 TTGCCCGCAATGCCCACT 62.993 61.111 0.00 0.00 0.00 4.00
31 32 4.992740 TGCCCGCAATGCCCACTT 62.993 61.111 0.00 0.00 0.00 3.16
32 33 3.694538 GCCCGCAATGCCCACTTT 61.695 61.111 0.00 0.00 0.00 2.66
33 34 2.347322 GCCCGCAATGCCCACTTTA 61.347 57.895 0.00 0.00 0.00 1.85
34 35 1.882989 GCCCGCAATGCCCACTTTAA 61.883 55.000 0.00 0.00 0.00 1.52
35 36 0.823460 CCCGCAATGCCCACTTTAAT 59.177 50.000 0.00 0.00 0.00 1.40
36 37 1.206849 CCCGCAATGCCCACTTTAATT 59.793 47.619 0.00 0.00 0.00 1.40
37 38 2.539476 CCGCAATGCCCACTTTAATTC 58.461 47.619 0.00 0.00 0.00 2.17
38 39 2.166254 CCGCAATGCCCACTTTAATTCT 59.834 45.455 0.00 0.00 0.00 2.40
39 40 3.368323 CCGCAATGCCCACTTTAATTCTT 60.368 43.478 0.00 0.00 0.00 2.52
40 41 3.859386 CGCAATGCCCACTTTAATTCTTC 59.141 43.478 0.00 0.00 0.00 2.87
41 42 4.183865 GCAATGCCCACTTTAATTCTTCC 58.816 43.478 0.00 0.00 0.00 3.46
42 43 4.081476 GCAATGCCCACTTTAATTCTTCCT 60.081 41.667 0.00 0.00 0.00 3.36
43 44 5.654497 CAATGCCCACTTTAATTCTTCCTC 58.346 41.667 0.00 0.00 0.00 3.71
44 45 4.380843 TGCCCACTTTAATTCTTCCTCA 57.619 40.909 0.00 0.00 0.00 3.86
45 46 4.079253 TGCCCACTTTAATTCTTCCTCAC 58.921 43.478 0.00 0.00 0.00 3.51
46 47 3.127030 GCCCACTTTAATTCTTCCTCACG 59.873 47.826 0.00 0.00 0.00 4.35
47 48 3.689649 CCCACTTTAATTCTTCCTCACGG 59.310 47.826 0.00 0.00 0.00 4.94
48 49 4.564821 CCCACTTTAATTCTTCCTCACGGA 60.565 45.833 0.00 0.00 37.60 4.69
49 50 4.631813 CCACTTTAATTCTTCCTCACGGAG 59.368 45.833 0.00 0.00 41.25 4.63
50 51 4.093556 CACTTTAATTCTTCCTCACGGAGC 59.906 45.833 0.00 0.00 41.25 4.70
51 52 3.973206 TTAATTCTTCCTCACGGAGCA 57.027 42.857 0.00 0.00 41.25 4.26
52 53 2.859165 AATTCTTCCTCACGGAGCAA 57.141 45.000 0.00 0.00 41.25 3.91
53 54 2.859165 ATTCTTCCTCACGGAGCAAA 57.141 45.000 0.00 0.00 41.25 3.68
54 55 2.859165 TTCTTCCTCACGGAGCAAAT 57.141 45.000 0.00 0.00 41.25 2.32
55 56 2.386661 TCTTCCTCACGGAGCAAATC 57.613 50.000 0.00 0.00 41.25 2.17
56 57 1.066143 TCTTCCTCACGGAGCAAATCC 60.066 52.381 0.00 0.00 45.64 3.01
64 65 3.584947 GGAGCAAATCCTTCAGCCT 57.415 52.632 0.00 0.00 45.64 4.58
65 66 1.387539 GGAGCAAATCCTTCAGCCTC 58.612 55.000 0.00 0.00 45.64 4.70
66 67 1.340405 GGAGCAAATCCTTCAGCCTCA 60.340 52.381 0.00 0.00 45.64 3.86
67 68 2.652590 GAGCAAATCCTTCAGCCTCAT 58.347 47.619 0.00 0.00 0.00 2.90
68 69 2.617774 GAGCAAATCCTTCAGCCTCATC 59.382 50.000 0.00 0.00 0.00 2.92
69 70 2.241685 AGCAAATCCTTCAGCCTCATCT 59.758 45.455 0.00 0.00 0.00 2.90
70 71 2.617774 GCAAATCCTTCAGCCTCATCTC 59.382 50.000 0.00 0.00 0.00 2.75
71 72 3.882444 CAAATCCTTCAGCCTCATCTCA 58.118 45.455 0.00 0.00 0.00 3.27
72 73 3.842007 AATCCTTCAGCCTCATCTCAG 57.158 47.619 0.00 0.00 0.00 3.35
73 74 0.829333 TCCTTCAGCCTCATCTCAGC 59.171 55.000 0.00 0.00 0.00 4.26
74 75 0.179051 CCTTCAGCCTCATCTCAGCC 60.179 60.000 0.00 0.00 0.00 4.85
75 76 0.831966 CTTCAGCCTCATCTCAGCCT 59.168 55.000 0.00 0.00 0.00 4.58
76 77 0.829333 TTCAGCCTCATCTCAGCCTC 59.171 55.000 0.00 0.00 0.00 4.70
77 78 0.325016 TCAGCCTCATCTCAGCCTCA 60.325 55.000 0.00 0.00 0.00 3.86
78 79 0.759959 CAGCCTCATCTCAGCCTCAT 59.240 55.000 0.00 0.00 0.00 2.90
79 80 0.759959 AGCCTCATCTCAGCCTCATG 59.240 55.000 0.00 0.00 0.00 3.07
80 81 0.885596 GCCTCATCTCAGCCTCATGC 60.886 60.000 0.00 0.00 41.71 4.06
101 102 4.455606 GCTTAATATGAAGCTCAGTGGGT 58.544 43.478 16.53 0.00 46.85 4.51
102 103 5.611374 GCTTAATATGAAGCTCAGTGGGTA 58.389 41.667 16.53 0.00 46.85 3.69
103 104 6.055588 GCTTAATATGAAGCTCAGTGGGTAA 58.944 40.000 16.53 0.00 46.85 2.85
104 105 6.017852 GCTTAATATGAAGCTCAGTGGGTAAC 60.018 42.308 16.53 0.00 46.85 2.50
105 106 5.435686 AATATGAAGCTCAGTGGGTAACA 57.564 39.130 0.00 0.00 39.74 2.41
106 107 2.839486 TGAAGCTCAGTGGGTAACAG 57.161 50.000 0.00 0.00 39.74 3.16
107 108 2.325484 TGAAGCTCAGTGGGTAACAGA 58.675 47.619 0.00 0.00 39.74 3.41
108 109 2.703536 TGAAGCTCAGTGGGTAACAGAA 59.296 45.455 0.00 0.00 39.74 3.02
109 110 2.841442 AGCTCAGTGGGTAACAGAAC 57.159 50.000 0.00 0.00 39.74 3.01
110 111 1.348036 AGCTCAGTGGGTAACAGAACC 59.652 52.381 0.00 0.00 38.94 3.62
111 112 1.071699 GCTCAGTGGGTAACAGAACCA 59.928 52.381 0.00 0.00 41.67 3.67
112 113 2.290323 GCTCAGTGGGTAACAGAACCAT 60.290 50.000 0.00 0.00 41.67 3.55
113 114 3.055385 GCTCAGTGGGTAACAGAACCATA 60.055 47.826 0.00 0.00 41.67 2.74
114 115 4.759782 CTCAGTGGGTAACAGAACCATAG 58.240 47.826 0.00 0.00 41.67 2.23
115 116 4.164981 TCAGTGGGTAACAGAACCATAGT 58.835 43.478 0.00 0.00 41.67 2.12
116 117 4.595781 TCAGTGGGTAACAGAACCATAGTT 59.404 41.667 0.00 0.00 41.67 2.24
117 118 5.072600 TCAGTGGGTAACAGAACCATAGTTT 59.927 40.000 0.00 0.00 41.67 2.66
118 119 5.411669 CAGTGGGTAACAGAACCATAGTTTC 59.588 44.000 0.00 0.00 41.67 2.78
119 120 5.309806 AGTGGGTAACAGAACCATAGTTTCT 59.690 40.000 0.00 0.00 41.67 2.52
120 121 5.411669 GTGGGTAACAGAACCATAGTTTCTG 59.588 44.000 9.94 9.94 41.67 3.02
121 122 4.395231 GGGTAACAGAACCATAGTTTCTGC 59.605 45.833 11.17 0.00 41.67 4.26
122 123 5.246307 GGTAACAGAACCATAGTTTCTGCT 58.754 41.667 11.17 3.18 39.50 4.24
123 124 5.705905 GGTAACAGAACCATAGTTTCTGCTT 59.294 40.000 11.17 8.00 39.50 3.91
124 125 6.206829 GGTAACAGAACCATAGTTTCTGCTTT 59.793 38.462 11.17 3.46 39.50 3.51
125 126 6.715347 AACAGAACCATAGTTTCTGCTTTT 57.285 33.333 11.17 0.00 35.94 2.27
126 127 7.817418 AACAGAACCATAGTTTCTGCTTTTA 57.183 32.000 11.17 0.00 35.94 1.52
127 128 8.409358 AACAGAACCATAGTTTCTGCTTTTAT 57.591 30.769 11.17 0.00 35.94 1.40
128 129 7.820648 ACAGAACCATAGTTTCTGCTTTTATG 58.179 34.615 11.17 0.00 35.94 1.90
129 130 7.448469 ACAGAACCATAGTTTCTGCTTTTATGT 59.552 33.333 11.17 0.00 35.94 2.29
130 131 7.965107 CAGAACCATAGTTTCTGCTTTTATGTC 59.035 37.037 0.00 0.00 35.94 3.06
131 132 7.885399 AGAACCATAGTTTCTGCTTTTATGTCT 59.115 33.333 0.00 0.00 35.94 3.41
132 133 9.162764 GAACCATAGTTTCTGCTTTTATGTCTA 57.837 33.333 0.00 0.00 35.94 2.59
133 134 9.515226 AACCATAGTTTCTGCTTTTATGTCTAA 57.485 29.630 0.00 0.00 29.61 2.10
134 135 9.167311 ACCATAGTTTCTGCTTTTATGTCTAAG 57.833 33.333 0.00 0.00 0.00 2.18
135 136 8.616076 CCATAGTTTCTGCTTTTATGTCTAAGG 58.384 37.037 0.00 0.00 0.00 2.69
136 137 9.167311 CATAGTTTCTGCTTTTATGTCTAAGGT 57.833 33.333 0.00 0.00 0.00 3.50
137 138 9.740710 ATAGTTTCTGCTTTTATGTCTAAGGTT 57.259 29.630 0.00 0.00 0.00 3.50
138 139 8.465273 AGTTTCTGCTTTTATGTCTAAGGTTT 57.535 30.769 0.00 0.00 0.00 3.27
139 140 8.352942 AGTTTCTGCTTTTATGTCTAAGGTTTG 58.647 33.333 0.00 0.00 0.00 2.93
140 141 7.817418 TTCTGCTTTTATGTCTAAGGTTTGT 57.183 32.000 0.00 0.00 0.00 2.83
141 142 8.911918 TTCTGCTTTTATGTCTAAGGTTTGTA 57.088 30.769 0.00 0.00 0.00 2.41
142 143 9.515226 TTCTGCTTTTATGTCTAAGGTTTGTAT 57.485 29.630 0.00 0.00 0.00 2.29
152 153 8.842358 TGTCTAAGGTTTGTATAAGTGAAAGG 57.158 34.615 0.00 0.00 0.00 3.11
153 154 8.653191 TGTCTAAGGTTTGTATAAGTGAAAGGA 58.347 33.333 0.00 0.00 0.00 3.36
154 155 9.152595 GTCTAAGGTTTGTATAAGTGAAAGGAG 57.847 37.037 0.00 0.00 0.00 3.69
155 156 8.877195 TCTAAGGTTTGTATAAGTGAAAGGAGT 58.123 33.333 0.00 0.00 0.00 3.85
156 157 7.981102 AAGGTTTGTATAAGTGAAAGGAGTC 57.019 36.000 0.00 0.00 0.00 3.36
157 158 7.317722 AGGTTTGTATAAGTGAAAGGAGTCT 57.682 36.000 0.00 0.00 0.00 3.24
158 159 7.746703 AGGTTTGTATAAGTGAAAGGAGTCTT 58.253 34.615 0.00 0.00 34.07 3.01
159 160 8.218488 AGGTTTGTATAAGTGAAAGGAGTCTTT 58.782 33.333 0.00 0.00 45.09 2.52
170 171 2.658373 GGAGTCTTTCCTTCTCGACC 57.342 55.000 0.00 0.00 43.16 4.79
171 172 2.172679 GGAGTCTTTCCTTCTCGACCT 58.827 52.381 0.00 0.00 43.16 3.85
172 173 2.563620 GGAGTCTTTCCTTCTCGACCTT 59.436 50.000 0.00 0.00 43.16 3.50
173 174 3.762823 GGAGTCTTTCCTTCTCGACCTTA 59.237 47.826 0.00 0.00 43.16 2.69
174 175 4.403113 GGAGTCTTTCCTTCTCGACCTTAT 59.597 45.833 0.00 0.00 43.16 1.73
175 176 5.593502 GGAGTCTTTCCTTCTCGACCTTATA 59.406 44.000 0.00 0.00 43.16 0.98
176 177 6.453926 AGTCTTTCCTTCTCGACCTTATAC 57.546 41.667 0.00 0.00 0.00 1.47
177 178 5.950549 AGTCTTTCCTTCTCGACCTTATACA 59.049 40.000 0.00 0.00 0.00 2.29
178 179 6.035217 GTCTTTCCTTCTCGACCTTATACAC 58.965 44.000 0.00 0.00 0.00 2.90
179 180 5.950549 TCTTTCCTTCTCGACCTTATACACT 59.049 40.000 0.00 0.00 0.00 3.55
180 181 5.831702 TTCCTTCTCGACCTTATACACTC 57.168 43.478 0.00 0.00 0.00 3.51
181 182 4.205587 TCCTTCTCGACCTTATACACTCC 58.794 47.826 0.00 0.00 0.00 3.85
182 183 3.952323 CCTTCTCGACCTTATACACTCCA 59.048 47.826 0.00 0.00 0.00 3.86
183 184 4.202030 CCTTCTCGACCTTATACACTCCAC 60.202 50.000 0.00 0.00 0.00 4.02
184 185 3.285484 TCTCGACCTTATACACTCCACC 58.715 50.000 0.00 0.00 0.00 4.61
185 186 3.053842 TCTCGACCTTATACACTCCACCT 60.054 47.826 0.00 0.00 0.00 4.00
186 187 4.164796 TCTCGACCTTATACACTCCACCTA 59.835 45.833 0.00 0.00 0.00 3.08
187 188 4.458397 TCGACCTTATACACTCCACCTAG 58.542 47.826 0.00 0.00 0.00 3.02
188 189 4.164796 TCGACCTTATACACTCCACCTAGA 59.835 45.833 0.00 0.00 0.00 2.43
189 190 5.071370 CGACCTTATACACTCCACCTAGAT 58.929 45.833 0.00 0.00 0.00 1.98
190 191 5.048643 CGACCTTATACACTCCACCTAGATG 60.049 48.000 0.00 0.00 0.00 2.90
191 192 5.778542 ACCTTATACACTCCACCTAGATGT 58.221 41.667 0.00 0.00 0.00 3.06
192 193 6.203072 ACCTTATACACTCCACCTAGATGTT 58.797 40.000 0.00 0.00 0.00 2.71
193 194 6.672657 ACCTTATACACTCCACCTAGATGTTT 59.327 38.462 0.00 0.00 0.00 2.83
194 195 7.842743 ACCTTATACACTCCACCTAGATGTTTA 59.157 37.037 0.00 0.00 0.00 2.01
195 196 8.361139 CCTTATACACTCCACCTAGATGTTTAG 58.639 40.741 0.00 0.00 0.00 1.85
196 197 4.473477 ACACTCCACCTAGATGTTTAGC 57.527 45.455 0.00 0.00 0.00 3.09
197 198 3.197983 ACACTCCACCTAGATGTTTAGCC 59.802 47.826 0.00 0.00 0.00 3.93
198 199 2.772515 ACTCCACCTAGATGTTTAGCCC 59.227 50.000 0.00 0.00 0.00 5.19
199 200 2.771943 CTCCACCTAGATGTTTAGCCCA 59.228 50.000 0.00 0.00 0.00 5.36
200 201 2.504175 TCCACCTAGATGTTTAGCCCAC 59.496 50.000 0.00 0.00 0.00 4.61
201 202 2.421529 CCACCTAGATGTTTAGCCCACC 60.422 54.545 0.00 0.00 0.00 4.61
202 203 1.844497 ACCTAGATGTTTAGCCCACCC 59.156 52.381 0.00 0.00 0.00 4.61
203 204 1.843851 CCTAGATGTTTAGCCCACCCA 59.156 52.381 0.00 0.00 0.00 4.51
204 205 2.443255 CCTAGATGTTTAGCCCACCCAT 59.557 50.000 0.00 0.00 0.00 4.00
205 206 2.442236 AGATGTTTAGCCCACCCATG 57.558 50.000 0.00 0.00 0.00 3.66
206 207 1.922447 AGATGTTTAGCCCACCCATGA 59.078 47.619 0.00 0.00 0.00 3.07
207 208 2.311542 AGATGTTTAGCCCACCCATGAA 59.688 45.455 0.00 0.00 0.00 2.57
208 209 2.214376 TGTTTAGCCCACCCATGAAG 57.786 50.000 0.00 0.00 0.00 3.02
209 210 1.272425 TGTTTAGCCCACCCATGAAGG 60.272 52.381 0.00 0.00 37.03 3.46
210 211 1.005450 GTTTAGCCCACCCATGAAGGA 59.995 52.381 0.00 0.00 41.22 3.36
211 212 1.377690 TTAGCCCACCCATGAAGGAA 58.622 50.000 0.00 0.00 41.22 3.36
212 213 0.918983 TAGCCCACCCATGAAGGAAG 59.081 55.000 0.00 0.00 41.22 3.46
213 214 2.054453 GCCCACCCATGAAGGAAGC 61.054 63.158 0.00 0.00 41.22 3.86
214 215 1.693640 CCCACCCATGAAGGAAGCT 59.306 57.895 0.00 0.00 41.22 3.74
215 216 0.040204 CCCACCCATGAAGGAAGCTT 59.960 55.000 0.00 0.00 41.22 3.74
216 217 1.467920 CCACCCATGAAGGAAGCTTC 58.532 55.000 18.54 18.54 41.22 3.86
217 218 1.005215 CCACCCATGAAGGAAGCTTCT 59.995 52.381 25.05 7.19 41.22 2.85
218 219 2.089980 CACCCATGAAGGAAGCTTCTG 58.910 52.381 25.05 14.92 41.22 3.02
219 220 1.988107 ACCCATGAAGGAAGCTTCTGA 59.012 47.619 25.05 1.64 41.22 3.27
220 221 2.026449 ACCCATGAAGGAAGCTTCTGAG 60.026 50.000 25.05 9.25 41.22 3.35
221 222 2.238144 CCCATGAAGGAAGCTTCTGAGA 59.762 50.000 25.05 8.58 41.22 3.27
222 223 3.117963 CCCATGAAGGAAGCTTCTGAGAT 60.118 47.826 25.05 10.39 41.22 2.75
223 224 3.878103 CCATGAAGGAAGCTTCTGAGATG 59.122 47.826 25.05 19.54 41.22 2.90
224 225 2.983229 TGAAGGAAGCTTCTGAGATGC 58.017 47.619 25.05 11.93 34.64 3.91
225 226 2.287769 GAAGGAAGCTTCTGAGATGCC 58.712 52.381 25.05 7.41 37.25 4.40
226 227 1.582389 AGGAAGCTTCTGAGATGCCT 58.418 50.000 25.05 9.70 42.81 4.75
227 228 2.756907 AGGAAGCTTCTGAGATGCCTA 58.243 47.619 25.05 0.00 45.88 3.93
228 229 3.110705 AGGAAGCTTCTGAGATGCCTAA 58.889 45.455 25.05 0.00 45.88 2.69
229 230 3.715834 AGGAAGCTTCTGAGATGCCTAAT 59.284 43.478 25.05 1.71 45.88 1.73
230 231 4.064388 GGAAGCTTCTGAGATGCCTAATC 58.936 47.826 25.05 9.64 33.87 1.75
231 232 6.402828 AGGAAGCTTCTGAGATGCCTAATCT 61.403 44.000 25.05 6.37 45.88 2.40
232 233 5.367302 GAAGCTTCTGAGATGCCTAATCTT 58.633 41.667 19.44 3.74 46.12 2.40
233 234 4.706035 AGCTTCTGAGATGCCTAATCTTG 58.294 43.478 15.65 0.00 46.12 3.02
234 235 4.163839 AGCTTCTGAGATGCCTAATCTTGT 59.836 41.667 15.65 0.00 46.12 3.16
235 236 4.880696 GCTTCTGAGATGCCTAATCTTGTT 59.119 41.667 8.99 0.00 46.12 2.83
236 237 5.007528 GCTTCTGAGATGCCTAATCTTGTTC 59.992 44.000 8.99 0.00 46.12 3.18
237 238 5.946942 TCTGAGATGCCTAATCTTGTTCT 57.053 39.130 0.00 0.00 46.12 3.01
238 239 5.668471 TCTGAGATGCCTAATCTTGTTCTG 58.332 41.667 0.00 0.00 46.12 3.02
239 240 4.194640 TGAGATGCCTAATCTTGTTCTGC 58.805 43.478 0.00 0.00 46.12 4.26
240 241 3.549794 AGATGCCTAATCTTGTTCTGCC 58.450 45.455 0.00 0.00 43.52 4.85
241 242 2.877097 TGCCTAATCTTGTTCTGCCA 57.123 45.000 0.00 0.00 0.00 4.92
242 243 3.370840 TGCCTAATCTTGTTCTGCCAT 57.629 42.857 0.00 0.00 0.00 4.40
243 244 3.282021 TGCCTAATCTTGTTCTGCCATC 58.718 45.455 0.00 0.00 0.00 3.51
244 245 2.289002 GCCTAATCTTGTTCTGCCATCG 59.711 50.000 0.00 0.00 0.00 3.84
245 246 3.535561 CCTAATCTTGTTCTGCCATCGT 58.464 45.455 0.00 0.00 0.00 3.73
246 247 3.941483 CCTAATCTTGTTCTGCCATCGTT 59.059 43.478 0.00 0.00 0.00 3.85
247 248 4.034510 CCTAATCTTGTTCTGCCATCGTTC 59.965 45.833 0.00 0.00 0.00 3.95
248 249 2.542020 TCTTGTTCTGCCATCGTTCA 57.458 45.000 0.00 0.00 0.00 3.18
249 250 2.844946 TCTTGTTCTGCCATCGTTCAA 58.155 42.857 0.00 0.00 0.00 2.69
250 251 3.411446 TCTTGTTCTGCCATCGTTCAAT 58.589 40.909 0.00 0.00 0.00 2.57
251 252 3.189080 TCTTGTTCTGCCATCGTTCAATG 59.811 43.478 0.00 0.00 0.00 2.82
257 258 2.872408 CCATCGTTCAATGGCACCT 58.128 52.632 0.00 0.00 39.84 4.00
258 259 0.452987 CCATCGTTCAATGGCACCTG 59.547 55.000 0.00 0.00 39.84 4.00
259 260 1.167851 CATCGTTCAATGGCACCTGT 58.832 50.000 0.00 0.00 0.00 4.00
260 261 2.355197 CATCGTTCAATGGCACCTGTA 58.645 47.619 0.00 0.00 0.00 2.74
261 262 1.803334 TCGTTCAATGGCACCTGTAC 58.197 50.000 0.00 0.00 0.00 2.90
262 263 0.802494 CGTTCAATGGCACCTGTACC 59.198 55.000 0.00 0.00 0.00 3.34
263 264 1.610624 CGTTCAATGGCACCTGTACCT 60.611 52.381 0.00 0.00 0.00 3.08
264 265 2.084546 GTTCAATGGCACCTGTACCTC 58.915 52.381 0.00 0.00 0.00 3.85
265 266 0.618458 TCAATGGCACCTGTACCTCC 59.382 55.000 0.00 0.00 0.00 4.30
266 267 0.620556 CAATGGCACCTGTACCTCCT 59.379 55.000 0.00 0.00 0.00 3.69
267 268 1.837439 CAATGGCACCTGTACCTCCTA 59.163 52.381 0.00 0.00 0.00 2.94
268 269 1.497161 ATGGCACCTGTACCTCCTAC 58.503 55.000 0.00 0.00 0.00 3.18
269 270 0.115547 TGGCACCTGTACCTCCTACA 59.884 55.000 0.00 0.00 34.01 2.74
270 271 1.273609 TGGCACCTGTACCTCCTACAT 60.274 52.381 0.00 0.00 34.69 2.29
271 272 1.413077 GGCACCTGTACCTCCTACATC 59.587 57.143 0.00 0.00 34.69 3.06
272 273 2.389715 GCACCTGTACCTCCTACATCT 58.610 52.381 0.00 0.00 34.69 2.90
273 274 2.362717 GCACCTGTACCTCCTACATCTC 59.637 54.545 0.00 0.00 34.69 2.75
274 275 3.904717 CACCTGTACCTCCTACATCTCT 58.095 50.000 0.00 0.00 34.69 3.10
275 276 3.634448 CACCTGTACCTCCTACATCTCTG 59.366 52.174 0.00 0.00 34.69 3.35
276 277 3.226777 CCTGTACCTCCTACATCTCTGG 58.773 54.545 0.00 0.00 34.69 3.86
277 278 2.625790 CTGTACCTCCTACATCTCTGGC 59.374 54.545 0.00 0.00 34.69 4.85
278 279 1.964933 GTACCTCCTACATCTCTGGCC 59.035 57.143 0.00 0.00 0.00 5.36
279 280 0.399233 ACCTCCTACATCTCTGGCCC 60.399 60.000 0.00 0.00 0.00 5.80
280 281 0.399091 CCTCCTACATCTCTGGCCCA 60.399 60.000 0.00 0.00 0.00 5.36
281 282 0.755686 CTCCTACATCTCTGGCCCAC 59.244 60.000 0.00 0.00 0.00 4.61
282 283 0.339859 TCCTACATCTCTGGCCCACT 59.660 55.000 0.00 0.00 0.00 4.00
283 284 0.755686 CCTACATCTCTGGCCCACTC 59.244 60.000 0.00 0.00 0.00 3.51
284 285 1.690845 CCTACATCTCTGGCCCACTCT 60.691 57.143 0.00 0.00 0.00 3.24
285 286 1.686052 CTACATCTCTGGCCCACTCTC 59.314 57.143 0.00 0.00 0.00 3.20
286 287 0.042431 ACATCTCTGGCCCACTCTCT 59.958 55.000 0.00 0.00 0.00 3.10
287 288 0.464870 CATCTCTGGCCCACTCTCTG 59.535 60.000 0.00 0.00 0.00 3.35
288 289 0.690411 ATCTCTGGCCCACTCTCTGG 60.690 60.000 0.00 0.00 40.26 3.86
309 310 5.841957 GGCAACAAGATCCAAATAGATGT 57.158 39.130 0.00 0.00 0.00 3.06
310 311 5.585390 GGCAACAAGATCCAAATAGATGTG 58.415 41.667 0.00 0.00 0.00 3.21
311 312 5.126061 GGCAACAAGATCCAAATAGATGTGT 59.874 40.000 0.00 0.00 0.00 3.72
312 313 6.261118 GCAACAAGATCCAAATAGATGTGTC 58.739 40.000 0.00 0.00 0.00 3.67
313 314 6.094603 GCAACAAGATCCAAATAGATGTGTCT 59.905 38.462 0.00 0.00 38.52 3.41
314 315 7.280876 GCAACAAGATCCAAATAGATGTGTCTA 59.719 37.037 0.00 0.00 41.03 2.59
315 316 8.824781 CAACAAGATCCAAATAGATGTGTCTAG 58.175 37.037 0.00 0.00 40.16 2.43
316 317 8.083828 ACAAGATCCAAATAGATGTGTCTAGT 57.916 34.615 0.00 0.00 40.16 2.57
317 318 8.543774 ACAAGATCCAAATAGATGTGTCTAGTT 58.456 33.333 0.00 0.00 43.77 2.24
325 326 6.775594 ATAGATGTGTCTAGTTGCACTACA 57.224 37.500 13.02 0.00 40.16 2.74
326 327 5.468540 AGATGTGTCTAGTTGCACTACAA 57.531 39.130 13.02 0.00 36.63 2.41
327 328 6.387465 TAGATGTGTCTAGTTGCACTACAAC 58.613 40.000 13.02 0.31 45.64 3.32
350 351 3.821421 TTCCTCGATTCCTCTTAAGGC 57.179 47.619 1.85 0.00 43.02 4.35
351 352 2.747177 TCCTCGATTCCTCTTAAGGCA 58.253 47.619 1.85 0.00 43.02 4.75
352 353 3.309296 TCCTCGATTCCTCTTAAGGCAT 58.691 45.455 1.85 0.00 43.02 4.40
353 354 3.070159 TCCTCGATTCCTCTTAAGGCATG 59.930 47.826 1.85 0.00 43.02 4.06
354 355 3.070159 CCTCGATTCCTCTTAAGGCATGA 59.930 47.826 1.85 0.00 43.02 3.07
355 356 4.305769 CTCGATTCCTCTTAAGGCATGAG 58.694 47.826 1.85 0.00 43.02 2.90
356 357 3.706594 TCGATTCCTCTTAAGGCATGAGT 59.293 43.478 1.85 0.00 43.02 3.41
357 358 4.162320 TCGATTCCTCTTAAGGCATGAGTT 59.838 41.667 1.85 0.00 43.02 3.01
358 359 4.272018 CGATTCCTCTTAAGGCATGAGTTG 59.728 45.833 1.85 0.00 43.02 3.16
365 366 2.359850 GGCATGAGTTGTCCGCCA 60.360 61.111 0.00 0.00 39.20 5.69
372 373 0.951040 GAGTTGTCCGCCAAGTCCAG 60.951 60.000 8.81 0.00 44.47 3.86
376 377 1.116536 TGTCCGCCAAGTCCAGTACA 61.117 55.000 0.00 0.00 0.00 2.90
383 384 3.185797 CGCCAAGTCCAGTACAAAGTTAC 59.814 47.826 0.00 0.00 0.00 2.50
390 391 2.873472 CCAGTACAAAGTTACCGCACAA 59.127 45.455 0.00 0.00 0.00 3.33
527 845 0.384353 GAAGGTCGCAAACTCGCAAC 60.384 55.000 0.00 0.00 0.00 4.17
569 915 1.294659 CTTGTGAAGGGCGAGCTCAC 61.295 60.000 15.40 3.30 39.93 3.51
572 918 0.603975 GTGAAGGGCGAGCTCACTTT 60.604 55.000 15.40 8.48 37.17 2.66
596 942 4.021016 GGACATACCTAGGGCTGAACTATG 60.021 50.000 14.81 12.06 35.41 2.23
597 943 4.557705 ACATACCTAGGGCTGAACTATGT 58.442 43.478 14.81 12.68 0.00 2.29
598 944 4.345257 ACATACCTAGGGCTGAACTATGTG 59.655 45.833 14.81 0.00 0.00 3.21
619 969 2.505982 GCCAGGATCTAGCGGCAA 59.494 61.111 1.45 0.00 44.25 4.52
630 980 3.031736 TCTAGCGGCAAAGAGGAACTAT 58.968 45.455 1.45 0.00 41.55 2.12
673 1027 8.338259 AGATTGTAACGATGCTATTTGATGAAC 58.662 33.333 0.00 0.00 0.00 3.18
678 1032 5.560148 ACGATGCTATTTGATGAACGAAAC 58.440 37.500 0.00 0.00 0.00 2.78
689 1043 3.130280 TGAACGAAACCCTCTTTACCC 57.870 47.619 0.00 0.00 0.00 3.69
793 1153 3.632855 GGCTTTTAGCATATGCCTGAC 57.367 47.619 23.96 8.40 44.75 3.51
808 1168 9.797556 CATATGCCTGACCAATATTGAATTATG 57.202 33.333 17.23 1.48 0.00 1.90
809 1169 6.088016 TGCCTGACCAATATTGAATTATGC 57.912 37.500 17.23 11.71 0.00 3.14
858 1218 1.001406 GACAGCTCAGCAACCACTACT 59.999 52.381 0.00 0.00 0.00 2.57
859 1219 2.231478 GACAGCTCAGCAACCACTACTA 59.769 50.000 0.00 0.00 0.00 1.82
860 1220 2.028930 ACAGCTCAGCAACCACTACTAC 60.029 50.000 0.00 0.00 0.00 2.73
947 1307 2.040412 ACGGCTCTTCATTTCTTCCCTT 59.960 45.455 0.00 0.00 0.00 3.95
960 1320 2.913617 TCTTCCCTTCCTTTTCCTCCTC 59.086 50.000 0.00 0.00 0.00 3.71
978 1338 4.290942 TCCTCCTCCTTCCTAAATCACTC 58.709 47.826 0.00 0.00 0.00 3.51
989 1349 9.627123 CCTTCCTAAATCACTCAATTACCATTA 57.373 33.333 0.00 0.00 0.00 1.90
1012 1372 3.185246 ACCTTATCATGCCGTTCTCAG 57.815 47.619 0.00 0.00 0.00 3.35
1020 1380 2.434359 CCGTTCTCAGGTTCGGCC 60.434 66.667 0.00 0.00 36.68 6.13
1030 1390 2.754375 GTTCGGCCTCCCTCCAAA 59.246 61.111 0.00 0.00 0.00 3.28
1044 1404 2.252260 CAAACCTTCGCGCCACAG 59.748 61.111 0.00 0.00 0.00 3.66
1090 1450 3.059325 GGAGCAAATTCCGATCGAAGATG 60.059 47.826 18.66 9.81 45.12 2.90
1091 1451 2.289002 AGCAAATTCCGATCGAAGATGC 59.711 45.455 18.66 18.57 45.12 3.91
1092 1452 2.896289 CAAATTCCGATCGAAGATGCG 58.104 47.619 18.66 0.00 45.12 4.73
1163 1523 4.124351 GGCGGACGACATGGACGA 62.124 66.667 18.41 0.00 34.70 4.20
1383 1743 4.070552 GCCCTGAGCCGACGTCTT 62.071 66.667 14.70 0.00 34.35 3.01
1705 2066 3.002965 CACCAAGTAAAAGAACGGGACAC 59.997 47.826 0.00 0.00 0.00 3.67
1716 2077 3.263941 GGGACACAATGGCACGAC 58.736 61.111 0.00 0.00 0.00 4.34
1739 2109 2.198827 TTCGTGACCAATGAAGGCAT 57.801 45.000 0.00 0.00 35.92 4.40
1740 2110 3.342377 TTCGTGACCAATGAAGGCATA 57.658 42.857 0.00 0.00 33.44 3.14
1793 2163 7.742767 ACTATACCAAACTCTAAACCTTGTGT 58.257 34.615 0.00 0.00 0.00 3.72
1834 2211 2.620585 GTCCTGCTGGCTCCATATTTTC 59.379 50.000 4.42 0.00 0.00 2.29
1836 2213 2.883386 CCTGCTGGCTCCATATTTTCTC 59.117 50.000 0.00 0.00 0.00 2.87
1839 2216 4.202441 TGCTGGCTCCATATTTTCTCTTC 58.798 43.478 0.00 0.00 0.00 2.87
1840 2217 4.202441 GCTGGCTCCATATTTTCTCTTCA 58.798 43.478 0.00 0.00 0.00 3.02
1841 2218 4.275443 GCTGGCTCCATATTTTCTCTTCAG 59.725 45.833 0.00 0.00 0.00 3.02
1843 2220 5.188434 TGGCTCCATATTTTCTCTTCAGTG 58.812 41.667 0.00 0.00 0.00 3.66
1844 2221 4.578105 GGCTCCATATTTTCTCTTCAGTGG 59.422 45.833 0.00 0.00 0.00 4.00
1845 2222 5.189180 GCTCCATATTTTCTCTTCAGTGGT 58.811 41.667 0.00 0.00 0.00 4.16
1846 2223 5.649831 GCTCCATATTTTCTCTTCAGTGGTT 59.350 40.000 0.00 0.00 0.00 3.67
1847 2224 6.183360 GCTCCATATTTTCTCTTCAGTGGTTC 60.183 42.308 0.00 0.00 0.00 3.62
1848 2225 6.778821 TCCATATTTTCTCTTCAGTGGTTCA 58.221 36.000 0.00 0.00 0.00 3.18
1849 2226 6.655003 TCCATATTTTCTCTTCAGTGGTTCAC 59.345 38.462 0.00 0.00 34.10 3.18
1850 2227 6.402550 CCATATTTTCTCTTCAGTGGTTCACG 60.403 42.308 0.00 0.00 39.64 4.35
1852 2229 4.659111 TTTCTCTTCAGTGGTTCACGTA 57.341 40.909 0.00 0.00 39.64 3.57
1854 2231 2.030185 TCTCTTCAGTGGTTCACGTAGC 60.030 50.000 0.00 0.00 39.64 3.58
1896 2305 1.613925 GAGCACTGGTATATCTCGCCA 59.386 52.381 0.00 0.00 0.00 5.69
1897 2306 2.232452 GAGCACTGGTATATCTCGCCAT 59.768 50.000 0.00 0.00 0.00 4.40
1898 2307 2.232452 AGCACTGGTATATCTCGCCATC 59.768 50.000 0.00 0.00 0.00 3.51
1900 2309 3.554960 GCACTGGTATATCTCGCCATCAA 60.555 47.826 0.00 0.00 0.00 2.57
1901 2310 3.990469 CACTGGTATATCTCGCCATCAAC 59.010 47.826 0.00 0.00 0.00 3.18
1903 2312 4.100963 ACTGGTATATCTCGCCATCAACAA 59.899 41.667 0.00 0.00 0.00 2.83
1904 2313 4.377021 TGGTATATCTCGCCATCAACAAC 58.623 43.478 0.00 0.00 0.00 3.32
1942 2351 8.497745 AGTGGTCTAAATTGATTATGGTGAGAT 58.502 33.333 0.00 0.00 0.00 2.75
1954 2363 0.548031 GGTGAGATGGATCTTGGCCA 59.452 55.000 0.00 0.00 37.25 5.36
1960 2369 5.182760 GTGAGATGGATCTTGGCCATTAATC 59.817 44.000 6.09 10.10 45.81 1.75
1961 2370 5.074102 TGAGATGGATCTTGGCCATTAATCT 59.926 40.000 6.09 9.79 45.81 2.40
1962 2371 5.568392 AGATGGATCTTGGCCATTAATCTC 58.432 41.667 6.09 5.13 45.81 2.75
1963 2372 5.312708 AGATGGATCTTGGCCATTAATCTCT 59.687 40.000 6.09 7.28 45.81 3.10
1983 2405 1.399714 ATTAGTGGAGGCGATCGACA 58.600 50.000 25.47 10.78 39.00 4.35
1989 2411 0.103208 GGAGGCGATCGACAATCTGT 59.897 55.000 25.47 0.00 31.68 3.41
1990 2412 1.482278 GAGGCGATCGACAATCTGTC 58.518 55.000 25.47 6.83 43.65 3.51
2011 2433 0.839277 ATCGAGTCCCATGATTGGCA 59.161 50.000 0.00 0.00 42.15 4.92
2013 2435 1.442526 CGAGTCCCATGATTGGCAGC 61.443 60.000 0.00 0.00 42.15 5.25
2020 2442 1.566404 CATGATTGGCAGCGTACGTA 58.434 50.000 17.90 0.00 0.00 3.57
2054 2476 3.426615 TGTTTAATTAGTGGTGGGCAGG 58.573 45.455 0.00 0.00 0.00 4.85
2105 2534 4.142271 CCAGGTTAGTTCAGCAGAGAGTAG 60.142 50.000 0.00 0.00 0.00 2.57
2116 2545 7.646548 TCAGCAGAGAGTAGTGTAATGTAAT 57.353 36.000 0.00 0.00 0.00 1.89
2117 2546 7.484140 TCAGCAGAGAGTAGTGTAATGTAATG 58.516 38.462 0.00 0.00 0.00 1.90
2128 2557 1.037030 AATGTAATGTGCGGCCCCTG 61.037 55.000 0.00 0.00 0.00 4.45
2202 2631 7.201750 GGATTAGATTTGTATTTTGTGCGGGTA 60.202 37.037 0.00 0.00 0.00 3.69
2205 2634 4.705337 TTTGTATTTTGTGCGGGTATCC 57.295 40.909 0.00 0.00 0.00 2.59
2304 2733 2.009774 CTTTTTCGGGTGATCGCATCT 58.990 47.619 8.82 0.00 0.00 2.90
2337 2768 7.413657 GCTTTGCGTTACATACCTTAATCTCAA 60.414 37.037 0.00 0.00 0.00 3.02
2348 2779 3.304559 CCTTAATCTCAACTCGTCGCAAG 59.695 47.826 0.00 0.00 0.00 4.01
2360 2791 1.659211 CGTCGCAAGGAAAGGAAAACG 60.659 52.381 0.00 0.00 38.47 3.60
2366 2797 4.083484 CGCAAGGAAAGGAAAACGTAATCT 60.083 41.667 0.00 0.00 0.00 2.40
2415 2846 5.964958 TTTGCGAGAGAAATTTCCAATCT 57.035 34.783 14.61 10.91 0.00 2.40
2416 2847 7.447374 TTTTGCGAGAGAAATTTCCAATCTA 57.553 32.000 14.61 0.00 0.00 1.98
2417 2848 7.630242 TTTGCGAGAGAAATTTCCAATCTAT 57.370 32.000 14.61 0.00 0.00 1.98
2418 2849 7.630242 TTGCGAGAGAAATTTCCAATCTATT 57.370 32.000 14.61 0.00 0.00 1.73
2419 2850 7.251704 TGCGAGAGAAATTTCCAATCTATTC 57.748 36.000 14.61 3.41 0.00 1.75
2420 2851 6.823182 TGCGAGAGAAATTTCCAATCTATTCA 59.177 34.615 14.61 7.17 0.00 2.57
2421 2852 7.500227 TGCGAGAGAAATTTCCAATCTATTCAT 59.500 33.333 14.61 0.00 0.00 2.57
2422 2853 8.014517 GCGAGAGAAATTTCCAATCTATTCATC 58.985 37.037 14.61 1.54 0.00 2.92
2423 2854 9.049523 CGAGAGAAATTTCCAATCTATTCATCA 57.950 33.333 14.61 0.00 0.00 3.07
2431 2862 6.829229 TCCAATCTATTCATCAATCATGGC 57.171 37.500 0.00 0.00 32.64 4.40
2432 2863 6.308566 TCCAATCTATTCATCAATCATGGCA 58.691 36.000 0.00 0.00 32.64 4.92
2433 2864 6.433093 TCCAATCTATTCATCAATCATGGCAG 59.567 38.462 0.00 0.00 32.64 4.85
2434 2865 6.208797 CCAATCTATTCATCAATCATGGCAGT 59.791 38.462 0.00 0.00 32.64 4.40
2435 2866 7.392393 CCAATCTATTCATCAATCATGGCAGTA 59.608 37.037 0.00 0.00 32.64 2.74
2436 2867 7.918536 ATCTATTCATCAATCATGGCAGTAC 57.081 36.000 0.00 0.00 32.64 2.73
2437 2868 6.829849 TCTATTCATCAATCATGGCAGTACA 58.170 36.000 0.00 0.00 32.64 2.90
2438 2869 6.932960 TCTATTCATCAATCATGGCAGTACAG 59.067 38.462 0.00 0.00 32.64 2.74
2439 2870 4.758773 TCATCAATCATGGCAGTACAGA 57.241 40.909 0.00 0.00 32.64 3.41
2440 2871 4.700700 TCATCAATCATGGCAGTACAGAG 58.299 43.478 0.00 0.00 32.64 3.35
2441 2872 4.406649 TCATCAATCATGGCAGTACAGAGA 59.593 41.667 0.00 0.00 32.64 3.10
2442 2873 4.824479 TCAATCATGGCAGTACAGAGAA 57.176 40.909 0.00 0.00 0.00 2.87
2443 2874 4.507710 TCAATCATGGCAGTACAGAGAAC 58.492 43.478 0.00 0.00 0.00 3.01
2444 2875 4.020307 TCAATCATGGCAGTACAGAGAACA 60.020 41.667 0.00 0.00 0.00 3.18
2445 2876 3.319137 TCATGGCAGTACAGAGAACAC 57.681 47.619 0.00 0.00 0.00 3.32
2446 2877 2.632512 TCATGGCAGTACAGAGAACACA 59.367 45.455 0.00 0.00 0.00 3.72
2447 2878 3.070878 TCATGGCAGTACAGAGAACACAA 59.929 43.478 0.00 0.00 0.00 3.33
2448 2879 3.111853 TGGCAGTACAGAGAACACAAG 57.888 47.619 0.00 0.00 0.00 3.16
2449 2880 2.698274 TGGCAGTACAGAGAACACAAGA 59.302 45.455 0.00 0.00 0.00 3.02
2450 2881 3.060602 GGCAGTACAGAGAACACAAGAC 58.939 50.000 0.00 0.00 0.00 3.01
2451 2882 3.492656 GGCAGTACAGAGAACACAAGACA 60.493 47.826 0.00 0.00 0.00 3.41
2452 2883 3.491267 GCAGTACAGAGAACACAAGACAC 59.509 47.826 0.00 0.00 0.00 3.67
2453 2884 3.731216 CAGTACAGAGAACACAAGACACG 59.269 47.826 0.00 0.00 0.00 4.49
2454 2885 2.961526 ACAGAGAACACAAGACACGT 57.038 45.000 0.00 0.00 0.00 4.49
2455 2886 2.810650 ACAGAGAACACAAGACACGTC 58.189 47.619 0.00 0.00 0.00 4.34
2456 2887 2.128035 CAGAGAACACAAGACACGTCC 58.872 52.381 0.00 0.00 0.00 4.79
2457 2888 1.754803 AGAGAACACAAGACACGTCCA 59.245 47.619 0.00 0.00 0.00 4.02
2458 2889 2.167693 AGAGAACACAAGACACGTCCAA 59.832 45.455 0.00 0.00 0.00 3.53
2459 2890 2.277084 AGAACACAAGACACGTCCAAC 58.723 47.619 0.00 0.00 0.00 3.77
2460 2891 2.093658 AGAACACAAGACACGTCCAACT 60.094 45.455 0.00 0.00 0.00 3.16
2461 2892 2.396590 ACACAAGACACGTCCAACTT 57.603 45.000 0.00 0.00 0.00 2.66
2462 2893 3.530265 ACACAAGACACGTCCAACTTA 57.470 42.857 0.00 0.00 0.00 2.24
2463 2894 3.192466 ACACAAGACACGTCCAACTTAC 58.808 45.455 0.00 0.00 0.00 2.34
2464 2895 3.191669 CACAAGACACGTCCAACTTACA 58.808 45.455 0.00 0.00 0.00 2.41
2465 2896 3.000925 CACAAGACACGTCCAACTTACAC 59.999 47.826 0.00 0.00 0.00 2.90
2466 2897 3.118884 ACAAGACACGTCCAACTTACACT 60.119 43.478 0.00 0.00 0.00 3.55
2467 2898 4.098349 ACAAGACACGTCCAACTTACACTA 59.902 41.667 0.00 0.00 0.00 2.74
2468 2899 4.500603 AGACACGTCCAACTTACACTAG 57.499 45.455 0.00 0.00 0.00 2.57
2469 2900 3.887716 AGACACGTCCAACTTACACTAGT 59.112 43.478 0.00 0.00 0.00 2.57
2470 2901 4.340381 AGACACGTCCAACTTACACTAGTT 59.660 41.667 0.00 0.00 38.87 2.24
2471 2902 5.532406 AGACACGTCCAACTTACACTAGTTA 59.468 40.000 0.00 0.00 36.24 2.24
2472 2903 6.208204 AGACACGTCCAACTTACACTAGTTAT 59.792 38.462 0.00 0.00 36.24 1.89
2473 2904 6.385033 ACACGTCCAACTTACACTAGTTATC 58.615 40.000 0.00 0.00 36.24 1.75
2474 2905 6.208204 ACACGTCCAACTTACACTAGTTATCT 59.792 38.462 0.00 0.00 36.24 1.98
2475 2906 7.088905 CACGTCCAACTTACACTAGTTATCTT 58.911 38.462 0.00 0.00 36.24 2.40
2476 2907 7.272948 CACGTCCAACTTACACTAGTTATCTTC 59.727 40.741 0.00 0.00 36.24 2.87
2477 2908 7.176340 ACGTCCAACTTACACTAGTTATCTTCT 59.824 37.037 0.00 0.00 36.24 2.85
2478 2909 8.027771 CGTCCAACTTACACTAGTTATCTTCTT 58.972 37.037 0.00 0.00 36.24 2.52
2479 2910 9.356433 GTCCAACTTACACTAGTTATCTTCTTC 57.644 37.037 0.00 0.00 36.24 2.87
2480 2911 8.242053 TCCAACTTACACTAGTTATCTTCTTCG 58.758 37.037 0.00 0.00 36.24 3.79
2481 2912 8.027771 CCAACTTACACTAGTTATCTTCTTCGT 58.972 37.037 0.00 0.00 36.24 3.85
2482 2913 8.851416 CAACTTACACTAGTTATCTTCTTCGTG 58.149 37.037 0.00 0.00 36.24 4.35
2483 2914 8.332996 ACTTACACTAGTTATCTTCTTCGTGA 57.667 34.615 0.00 0.00 0.00 4.35
2484 2915 8.958506 ACTTACACTAGTTATCTTCTTCGTGAT 58.041 33.333 0.00 0.00 0.00 3.06
2485 2916 9.227490 CTTACACTAGTTATCTTCTTCGTGATG 57.773 37.037 0.00 0.00 0.00 3.07
2486 2917 7.392494 ACACTAGTTATCTTCTTCGTGATGA 57.608 36.000 0.00 0.00 34.09 2.92
2487 2918 8.001881 ACACTAGTTATCTTCTTCGTGATGAT 57.998 34.615 0.00 11.64 40.94 2.45
2488 2919 7.918033 ACACTAGTTATCTTCTTCGTGATGATG 59.082 37.037 14.58 5.60 39.14 3.07
2489 2920 7.380870 CACTAGTTATCTTCTTCGTGATGATGG 59.619 40.741 14.58 6.84 39.14 3.51
2490 2921 6.471233 AGTTATCTTCTTCGTGATGATGGA 57.529 37.500 14.58 5.86 39.14 3.41
2491 2922 6.878317 AGTTATCTTCTTCGTGATGATGGAA 58.122 36.000 14.58 5.02 39.14 3.53
2492 2923 6.758886 AGTTATCTTCTTCGTGATGATGGAAC 59.241 38.462 14.58 12.47 39.14 3.62
2493 2924 4.808414 TCTTCTTCGTGATGATGGAACT 57.192 40.909 0.00 0.00 0.00 3.01
2494 2925 5.914898 TCTTCTTCGTGATGATGGAACTA 57.085 39.130 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.318576 CGGGCAAAGGTGAGAAAAGT 58.681 50.000 0.00 0.00 0.00 2.66
1 2 0.039165 GCGGGCAAAGGTGAGAAAAG 60.039 55.000 0.00 0.00 0.00 2.27
2 3 0.753479 TGCGGGCAAAGGTGAGAAAA 60.753 50.000 0.00 0.00 0.00 2.29
3 4 0.753479 TTGCGGGCAAAGGTGAGAAA 60.753 50.000 3.16 0.00 32.44 2.52
4 5 0.539438 ATTGCGGGCAAAGGTGAGAA 60.539 50.000 10.45 0.00 39.55 2.87
5 6 1.074775 ATTGCGGGCAAAGGTGAGA 59.925 52.632 10.45 0.00 39.55 3.27
6 7 1.213537 CATTGCGGGCAAAGGTGAG 59.786 57.895 10.45 0.00 39.55 3.51
7 8 2.929903 GCATTGCGGGCAAAGGTGA 61.930 57.895 10.45 0.00 39.55 4.02
8 9 2.432972 GCATTGCGGGCAAAGGTG 60.433 61.111 10.45 5.71 39.55 4.00
9 10 3.694538 GGCATTGCGGGCAAAGGT 61.695 61.111 10.45 0.00 39.55 3.50
10 11 4.455906 GGGCATTGCGGGCAAAGG 62.456 66.667 10.45 7.07 39.55 3.11
11 12 3.693471 TGGGCATTGCGGGCAAAG 61.693 61.111 10.45 7.22 39.55 2.77
12 13 4.001226 GTGGGCATTGCGGGCAAA 62.001 61.111 10.45 0.00 39.55 3.68
13 14 4.992740 AGTGGGCATTGCGGGCAA 62.993 61.111 8.72 8.72 40.47 4.52
14 15 4.992740 AAGTGGGCATTGCGGGCA 62.993 61.111 1.91 0.00 34.52 5.36
15 16 1.882989 TTAAAGTGGGCATTGCGGGC 61.883 55.000 1.91 0.00 0.00 6.13
16 17 0.823460 ATTAAAGTGGGCATTGCGGG 59.177 50.000 1.91 0.00 0.00 6.13
17 18 2.166254 AGAATTAAAGTGGGCATTGCGG 59.834 45.455 1.91 0.00 0.00 5.69
18 19 3.508744 AGAATTAAAGTGGGCATTGCG 57.491 42.857 1.91 0.00 0.00 4.85
19 20 4.081476 AGGAAGAATTAAAGTGGGCATTGC 60.081 41.667 0.00 0.00 0.00 3.56
20 21 5.185635 TGAGGAAGAATTAAAGTGGGCATTG 59.814 40.000 0.00 0.00 0.00 2.82
21 22 5.185828 GTGAGGAAGAATTAAAGTGGGCATT 59.814 40.000 0.00 0.00 0.00 3.56
22 23 4.706962 GTGAGGAAGAATTAAAGTGGGCAT 59.293 41.667 0.00 0.00 0.00 4.40
23 24 4.079253 GTGAGGAAGAATTAAAGTGGGCA 58.921 43.478 0.00 0.00 0.00 5.36
24 25 3.127030 CGTGAGGAAGAATTAAAGTGGGC 59.873 47.826 0.00 0.00 0.00 5.36
25 26 4.946784 CGTGAGGAAGAATTAAAGTGGG 57.053 45.455 0.00 0.00 0.00 4.61
46 47 1.340405 TGAGGCTGAAGGATTTGCTCC 60.340 52.381 0.00 0.00 45.33 4.70
47 48 2.119801 TGAGGCTGAAGGATTTGCTC 57.880 50.000 0.00 0.00 0.00 4.26
48 49 2.241685 AGATGAGGCTGAAGGATTTGCT 59.758 45.455 0.00 0.00 0.00 3.91
49 50 2.617774 GAGATGAGGCTGAAGGATTTGC 59.382 50.000 0.00 0.00 0.00 3.68
50 51 3.878103 CTGAGATGAGGCTGAAGGATTTG 59.122 47.826 0.00 0.00 0.00 2.32
51 52 3.684981 GCTGAGATGAGGCTGAAGGATTT 60.685 47.826 0.00 0.00 0.00 2.17
52 53 2.158784 GCTGAGATGAGGCTGAAGGATT 60.159 50.000 0.00 0.00 0.00 3.01
53 54 1.417145 GCTGAGATGAGGCTGAAGGAT 59.583 52.381 0.00 0.00 0.00 3.24
54 55 0.829333 GCTGAGATGAGGCTGAAGGA 59.171 55.000 0.00 0.00 0.00 3.36
55 56 0.179051 GGCTGAGATGAGGCTGAAGG 60.179 60.000 0.00 0.00 35.65 3.46
56 57 0.831966 AGGCTGAGATGAGGCTGAAG 59.168 55.000 0.00 0.00 46.58 3.02
57 58 3.003027 AGGCTGAGATGAGGCTGAA 57.997 52.632 0.00 0.00 46.58 3.02
58 59 4.802947 AGGCTGAGATGAGGCTGA 57.197 55.556 0.00 0.00 46.58 4.26
61 62 0.885596 GCATGAGGCTGAGATGAGGC 60.886 60.000 0.00 0.00 40.25 4.70
62 63 3.309052 GCATGAGGCTGAGATGAGG 57.691 57.895 0.00 0.00 40.25 3.86
80 81 7.047891 TGTTACCCACTGAGCTTCATATTAAG 58.952 38.462 0.00 0.00 0.00 1.85
81 82 6.953101 TGTTACCCACTGAGCTTCATATTAA 58.047 36.000 0.00 0.00 0.00 1.40
82 83 6.382859 TCTGTTACCCACTGAGCTTCATATTA 59.617 38.462 0.00 0.00 0.00 0.98
83 84 5.189736 TCTGTTACCCACTGAGCTTCATATT 59.810 40.000 0.00 0.00 0.00 1.28
84 85 4.716784 TCTGTTACCCACTGAGCTTCATAT 59.283 41.667 0.00 0.00 0.00 1.78
85 86 4.093743 TCTGTTACCCACTGAGCTTCATA 58.906 43.478 0.00 0.00 0.00 2.15
86 87 2.906389 TCTGTTACCCACTGAGCTTCAT 59.094 45.455 0.00 0.00 0.00 2.57
87 88 2.325484 TCTGTTACCCACTGAGCTTCA 58.675 47.619 0.00 0.00 0.00 3.02
88 89 3.067833 GTTCTGTTACCCACTGAGCTTC 58.932 50.000 0.00 0.00 35.00 3.86
89 90 2.224548 GGTTCTGTTACCCACTGAGCTT 60.225 50.000 0.00 0.00 35.62 3.74
90 91 1.348036 GGTTCTGTTACCCACTGAGCT 59.652 52.381 0.00 0.00 35.62 4.09
91 92 1.071699 TGGTTCTGTTACCCACTGAGC 59.928 52.381 0.00 0.00 37.39 4.26
92 93 3.703001 ATGGTTCTGTTACCCACTGAG 57.297 47.619 0.00 0.00 37.39 3.35
93 94 4.164981 ACTATGGTTCTGTTACCCACTGA 58.835 43.478 0.00 0.00 37.39 3.41
94 95 4.553330 ACTATGGTTCTGTTACCCACTG 57.447 45.455 0.00 0.00 37.39 3.66
95 96 5.309806 AGAAACTATGGTTCTGTTACCCACT 59.690 40.000 0.00 0.00 37.39 4.00
96 97 5.411669 CAGAAACTATGGTTCTGTTACCCAC 59.588 44.000 15.00 0.00 37.39 4.61
97 98 5.556915 CAGAAACTATGGTTCTGTTACCCA 58.443 41.667 15.00 0.00 37.39 4.51
98 99 4.395231 GCAGAAACTATGGTTCTGTTACCC 59.605 45.833 21.54 5.91 37.39 3.69
99 100 5.246307 AGCAGAAACTATGGTTCTGTTACC 58.754 41.667 21.54 9.04 38.73 2.85
100 101 6.803154 AAGCAGAAACTATGGTTCTGTTAC 57.197 37.500 21.54 9.33 33.28 2.50
101 102 7.817418 AAAAGCAGAAACTATGGTTCTGTTA 57.183 32.000 21.54 0.00 37.39 2.41
102 103 6.715347 AAAAGCAGAAACTATGGTTCTGTT 57.285 33.333 21.54 15.50 37.39 3.16
103 104 7.448469 ACATAAAAGCAGAAACTATGGTTCTGT 59.552 33.333 21.54 9.71 37.39 3.41
104 105 7.820648 ACATAAAAGCAGAAACTATGGTTCTG 58.179 34.615 17.94 17.94 37.39 3.02
105 106 7.885399 AGACATAAAAGCAGAAACTATGGTTCT 59.115 33.333 0.00 0.00 37.39 3.01
106 107 8.045176 AGACATAAAAGCAGAAACTATGGTTC 57.955 34.615 0.00 0.00 37.39 3.62
107 108 9.515226 TTAGACATAAAAGCAGAAACTATGGTT 57.485 29.630 0.00 0.00 39.92 3.67
108 109 9.167311 CTTAGACATAAAAGCAGAAACTATGGT 57.833 33.333 0.00 0.00 0.00 3.55
109 110 8.616076 CCTTAGACATAAAAGCAGAAACTATGG 58.384 37.037 0.00 0.00 0.00 2.74
110 111 9.167311 ACCTTAGACATAAAAGCAGAAACTATG 57.833 33.333 0.00 0.00 0.00 2.23
111 112 9.740710 AACCTTAGACATAAAAGCAGAAACTAT 57.259 29.630 0.00 0.00 0.00 2.12
112 113 9.569122 AAACCTTAGACATAAAAGCAGAAACTA 57.431 29.630 0.00 0.00 0.00 2.24
113 114 8.352942 CAAACCTTAGACATAAAAGCAGAAACT 58.647 33.333 0.00 0.00 0.00 2.66
114 115 8.135529 ACAAACCTTAGACATAAAAGCAGAAAC 58.864 33.333 0.00 0.00 0.00 2.78
115 116 8.232913 ACAAACCTTAGACATAAAAGCAGAAA 57.767 30.769 0.00 0.00 0.00 2.52
116 117 7.817418 ACAAACCTTAGACATAAAAGCAGAA 57.183 32.000 0.00 0.00 0.00 3.02
126 127 9.449719 CCTTTCACTTATACAAACCTTAGACAT 57.550 33.333 0.00 0.00 0.00 3.06
127 128 8.653191 TCCTTTCACTTATACAAACCTTAGACA 58.347 33.333 0.00 0.00 0.00 3.41
128 129 9.152595 CTCCTTTCACTTATACAAACCTTAGAC 57.847 37.037 0.00 0.00 0.00 2.59
129 130 8.877195 ACTCCTTTCACTTATACAAACCTTAGA 58.123 33.333 0.00 0.00 0.00 2.10
130 131 9.152595 GACTCCTTTCACTTATACAAACCTTAG 57.847 37.037 0.00 0.00 0.00 2.18
131 132 8.877195 AGACTCCTTTCACTTATACAAACCTTA 58.123 33.333 0.00 0.00 0.00 2.69
132 133 7.746703 AGACTCCTTTCACTTATACAAACCTT 58.253 34.615 0.00 0.00 0.00 3.50
133 134 7.317722 AGACTCCTTTCACTTATACAAACCT 57.682 36.000 0.00 0.00 0.00 3.50
134 135 7.981102 AAGACTCCTTTCACTTATACAAACC 57.019 36.000 0.00 0.00 0.00 3.27
151 152 2.172679 AGGTCGAGAAGGAAAGACTCC 58.827 52.381 0.00 0.00 45.81 3.85
152 153 3.945981 AAGGTCGAGAAGGAAAGACTC 57.054 47.619 0.00 0.00 34.34 3.36
153 154 5.950549 TGTATAAGGTCGAGAAGGAAAGACT 59.049 40.000 0.00 0.00 34.34 3.24
154 155 6.035217 GTGTATAAGGTCGAGAAGGAAAGAC 58.965 44.000 0.00 0.00 0.00 3.01
155 156 5.950549 AGTGTATAAGGTCGAGAAGGAAAGA 59.049 40.000 0.00 0.00 0.00 2.52
156 157 6.210287 AGTGTATAAGGTCGAGAAGGAAAG 57.790 41.667 0.00 0.00 0.00 2.62
157 158 5.126707 GGAGTGTATAAGGTCGAGAAGGAAA 59.873 44.000 0.00 0.00 0.00 3.13
158 159 4.643784 GGAGTGTATAAGGTCGAGAAGGAA 59.356 45.833 0.00 0.00 0.00 3.36
159 160 4.205587 GGAGTGTATAAGGTCGAGAAGGA 58.794 47.826 0.00 0.00 0.00 3.36
160 161 3.952323 TGGAGTGTATAAGGTCGAGAAGG 59.048 47.826 0.00 0.00 0.00 3.46
161 162 4.202030 GGTGGAGTGTATAAGGTCGAGAAG 60.202 50.000 0.00 0.00 0.00 2.85
162 163 3.698040 GGTGGAGTGTATAAGGTCGAGAA 59.302 47.826 0.00 0.00 0.00 2.87
163 164 3.053842 AGGTGGAGTGTATAAGGTCGAGA 60.054 47.826 0.00 0.00 0.00 4.04
164 165 3.288964 AGGTGGAGTGTATAAGGTCGAG 58.711 50.000 0.00 0.00 0.00 4.04
165 166 3.377253 AGGTGGAGTGTATAAGGTCGA 57.623 47.619 0.00 0.00 0.00 4.20
166 167 4.458397 TCTAGGTGGAGTGTATAAGGTCG 58.542 47.826 0.00 0.00 0.00 4.79
167 168 5.834204 ACATCTAGGTGGAGTGTATAAGGTC 59.166 44.000 8.13 0.00 0.00 3.85
168 169 5.778542 ACATCTAGGTGGAGTGTATAAGGT 58.221 41.667 8.13 0.00 0.00 3.50
169 170 6.732896 AACATCTAGGTGGAGTGTATAAGG 57.267 41.667 8.13 0.00 0.00 2.69
170 171 7.868415 GCTAAACATCTAGGTGGAGTGTATAAG 59.132 40.741 8.13 0.00 0.00 1.73
171 172 7.201974 GGCTAAACATCTAGGTGGAGTGTATAA 60.202 40.741 8.13 0.00 0.00 0.98
172 173 6.267014 GGCTAAACATCTAGGTGGAGTGTATA 59.733 42.308 8.13 0.00 0.00 1.47
173 174 5.070580 GGCTAAACATCTAGGTGGAGTGTAT 59.929 44.000 8.13 0.00 0.00 2.29
174 175 4.404715 GGCTAAACATCTAGGTGGAGTGTA 59.595 45.833 8.13 0.00 0.00 2.90
175 176 3.197983 GGCTAAACATCTAGGTGGAGTGT 59.802 47.826 8.13 0.00 0.00 3.55
176 177 3.432326 GGGCTAAACATCTAGGTGGAGTG 60.432 52.174 8.13 0.00 0.00 3.51
177 178 2.772515 GGGCTAAACATCTAGGTGGAGT 59.227 50.000 8.13 0.00 0.00 3.85
178 179 2.771943 TGGGCTAAACATCTAGGTGGAG 59.228 50.000 8.13 2.85 0.00 3.86
179 180 2.504175 GTGGGCTAAACATCTAGGTGGA 59.496 50.000 8.13 0.00 0.00 4.02
180 181 2.421529 GGTGGGCTAAACATCTAGGTGG 60.422 54.545 8.13 0.00 0.00 4.61
181 182 2.421529 GGGTGGGCTAAACATCTAGGTG 60.422 54.545 0.04 0.04 0.00 4.00
182 183 1.844497 GGGTGGGCTAAACATCTAGGT 59.156 52.381 0.00 0.00 0.00 3.08
183 184 1.843851 TGGGTGGGCTAAACATCTAGG 59.156 52.381 0.00 0.00 0.00 3.02
184 185 3.136443 TCATGGGTGGGCTAAACATCTAG 59.864 47.826 0.00 0.00 0.00 2.43
185 186 3.119319 TCATGGGTGGGCTAAACATCTA 58.881 45.455 0.00 0.00 0.00 1.98
186 187 1.922447 TCATGGGTGGGCTAAACATCT 59.078 47.619 0.00 0.00 0.00 2.90
187 188 2.435372 TCATGGGTGGGCTAAACATC 57.565 50.000 0.00 0.00 0.00 3.06
188 189 2.624029 CCTTCATGGGTGGGCTAAACAT 60.624 50.000 0.00 0.00 0.00 2.71
189 190 1.272425 CCTTCATGGGTGGGCTAAACA 60.272 52.381 0.00 0.00 0.00 2.83
190 191 1.005450 TCCTTCATGGGTGGGCTAAAC 59.995 52.381 0.00 0.00 36.20 2.01
191 192 1.377690 TCCTTCATGGGTGGGCTAAA 58.622 50.000 0.00 0.00 36.20 1.85
192 193 1.284785 CTTCCTTCATGGGTGGGCTAA 59.715 52.381 0.00 0.00 36.20 3.09
193 194 0.918983 CTTCCTTCATGGGTGGGCTA 59.081 55.000 0.00 0.00 36.20 3.93
194 195 1.693640 CTTCCTTCATGGGTGGGCT 59.306 57.895 0.00 0.00 36.20 5.19
195 196 2.054453 GCTTCCTTCATGGGTGGGC 61.054 63.158 0.00 0.00 36.20 5.36
196 197 0.040204 AAGCTTCCTTCATGGGTGGG 59.960 55.000 0.00 0.00 36.20 4.61
197 198 1.467920 GAAGCTTCCTTCATGGGTGG 58.532 55.000 15.97 0.00 45.44 4.61
205 206 2.093021 AGGCATCTCAGAAGCTTCCTTC 60.093 50.000 22.81 0.00 46.29 3.46
206 207 1.914798 AGGCATCTCAGAAGCTTCCTT 59.085 47.619 22.81 2.23 0.00 3.36
207 208 1.582389 AGGCATCTCAGAAGCTTCCT 58.418 50.000 22.81 8.03 0.00 3.36
208 209 3.550437 TTAGGCATCTCAGAAGCTTCC 57.450 47.619 22.81 5.63 0.00 3.46
209 210 4.959723 AGATTAGGCATCTCAGAAGCTTC 58.040 43.478 19.11 19.11 37.79 3.86
210 211 5.124645 CAAGATTAGGCATCTCAGAAGCTT 58.875 41.667 0.00 0.00 41.93 3.74
211 212 4.163839 ACAAGATTAGGCATCTCAGAAGCT 59.836 41.667 1.18 0.00 41.93 3.74
212 213 4.450053 ACAAGATTAGGCATCTCAGAAGC 58.550 43.478 0.00 0.00 41.93 3.86
213 214 6.258287 CAGAACAAGATTAGGCATCTCAGAAG 59.742 42.308 0.00 0.00 41.93 2.85
214 215 6.111382 CAGAACAAGATTAGGCATCTCAGAA 58.889 40.000 0.00 0.00 41.93 3.02
215 216 5.668471 CAGAACAAGATTAGGCATCTCAGA 58.332 41.667 0.00 0.00 41.93 3.27
216 217 4.272991 GCAGAACAAGATTAGGCATCTCAG 59.727 45.833 0.00 0.00 41.93 3.35
217 218 4.194640 GCAGAACAAGATTAGGCATCTCA 58.805 43.478 0.00 0.00 41.93 3.27
218 219 3.563390 GGCAGAACAAGATTAGGCATCTC 59.437 47.826 0.00 0.00 41.93 2.75
219 220 3.054139 TGGCAGAACAAGATTAGGCATCT 60.054 43.478 0.00 0.00 45.03 2.90
220 221 3.282021 TGGCAGAACAAGATTAGGCATC 58.718 45.455 0.00 0.00 0.00 3.91
221 222 3.370840 TGGCAGAACAAGATTAGGCAT 57.629 42.857 0.00 0.00 0.00 4.40
222 223 2.877097 TGGCAGAACAAGATTAGGCA 57.123 45.000 0.00 0.00 0.00 4.75
223 224 2.289002 CGATGGCAGAACAAGATTAGGC 59.711 50.000 0.00 0.00 0.00 3.93
224 225 3.535561 ACGATGGCAGAACAAGATTAGG 58.464 45.455 0.00 0.00 0.00 2.69
225 226 4.631377 TGAACGATGGCAGAACAAGATTAG 59.369 41.667 0.00 0.00 0.00 1.73
226 227 4.574892 TGAACGATGGCAGAACAAGATTA 58.425 39.130 0.00 0.00 0.00 1.75
227 228 3.411446 TGAACGATGGCAGAACAAGATT 58.589 40.909 0.00 0.00 0.00 2.40
228 229 3.057969 TGAACGATGGCAGAACAAGAT 57.942 42.857 0.00 0.00 0.00 2.40
229 230 2.542020 TGAACGATGGCAGAACAAGA 57.458 45.000 0.00 0.00 0.00 3.02
230 231 3.495193 CATTGAACGATGGCAGAACAAG 58.505 45.455 0.00 0.00 0.00 3.16
231 232 2.228582 CCATTGAACGATGGCAGAACAA 59.771 45.455 7.97 0.00 40.11 2.83
232 233 1.811965 CCATTGAACGATGGCAGAACA 59.188 47.619 7.97 0.00 40.11 3.18
233 234 2.549633 CCATTGAACGATGGCAGAAC 57.450 50.000 7.97 0.00 40.11 3.01
240 241 1.167851 ACAGGTGCCATTGAACGATG 58.832 50.000 0.00 0.00 0.00 3.84
241 242 2.356135 GTACAGGTGCCATTGAACGAT 58.644 47.619 0.00 0.00 0.00 3.73
242 243 1.609580 GGTACAGGTGCCATTGAACGA 60.610 52.381 1.39 0.00 35.28 3.85
243 244 0.802494 GGTACAGGTGCCATTGAACG 59.198 55.000 1.39 0.00 35.28 3.95
244 245 2.084546 GAGGTACAGGTGCCATTGAAC 58.915 52.381 9.25 0.00 37.85 3.18
245 246 1.004277 GGAGGTACAGGTGCCATTGAA 59.996 52.381 9.25 0.00 37.85 2.69
246 247 0.618458 GGAGGTACAGGTGCCATTGA 59.382 55.000 9.25 0.00 37.85 2.57
247 248 0.620556 AGGAGGTACAGGTGCCATTG 59.379 55.000 9.25 0.00 37.85 2.82
248 249 1.838077 GTAGGAGGTACAGGTGCCATT 59.162 52.381 9.25 0.00 37.85 3.16
249 250 1.273609 TGTAGGAGGTACAGGTGCCAT 60.274 52.381 9.25 0.00 36.67 4.40
250 251 0.115547 TGTAGGAGGTACAGGTGCCA 59.884 55.000 9.25 0.00 36.67 4.92
251 252 1.413077 GATGTAGGAGGTACAGGTGCC 59.587 57.143 0.00 0.00 45.06 5.01
252 253 2.362717 GAGATGTAGGAGGTACAGGTGC 59.637 54.545 0.00 0.00 45.06 5.01
253 254 3.634448 CAGAGATGTAGGAGGTACAGGTG 59.366 52.174 0.00 0.00 45.06 4.00
254 255 3.373220 CCAGAGATGTAGGAGGTACAGGT 60.373 52.174 0.00 0.00 45.06 4.00
255 256 3.226777 CCAGAGATGTAGGAGGTACAGG 58.773 54.545 0.00 0.00 45.06 4.00
256 257 2.625790 GCCAGAGATGTAGGAGGTACAG 59.374 54.545 0.00 0.00 45.06 2.74
257 258 2.667470 GCCAGAGATGTAGGAGGTACA 58.333 52.381 0.00 0.00 45.93 2.90
258 259 1.964933 GGCCAGAGATGTAGGAGGTAC 59.035 57.143 0.00 0.00 0.00 3.34
259 260 1.133136 GGGCCAGAGATGTAGGAGGTA 60.133 57.143 4.39 0.00 0.00 3.08
260 261 0.399233 GGGCCAGAGATGTAGGAGGT 60.399 60.000 4.39 0.00 0.00 3.85
261 262 0.399091 TGGGCCAGAGATGTAGGAGG 60.399 60.000 0.00 0.00 0.00 4.30
262 263 0.755686 GTGGGCCAGAGATGTAGGAG 59.244 60.000 6.40 0.00 0.00 3.69
263 264 0.339859 AGTGGGCCAGAGATGTAGGA 59.660 55.000 6.40 0.00 0.00 2.94
264 265 0.755686 GAGTGGGCCAGAGATGTAGG 59.244 60.000 6.40 0.00 0.00 3.18
265 266 1.686052 GAGAGTGGGCCAGAGATGTAG 59.314 57.143 6.40 0.00 0.00 2.74
266 267 1.289231 AGAGAGTGGGCCAGAGATGTA 59.711 52.381 6.40 0.00 0.00 2.29
267 268 0.042431 AGAGAGTGGGCCAGAGATGT 59.958 55.000 6.40 0.00 0.00 3.06
268 269 0.464870 CAGAGAGTGGGCCAGAGATG 59.535 60.000 6.40 0.00 0.00 2.90
269 270 0.690411 CCAGAGAGTGGGCCAGAGAT 60.690 60.000 6.40 0.00 43.63 2.75
270 271 1.305633 CCAGAGAGTGGGCCAGAGA 60.306 63.158 6.40 0.00 43.63 3.10
271 272 3.307445 CCAGAGAGTGGGCCAGAG 58.693 66.667 6.40 0.00 43.63 3.35
279 280 2.289882 TGGATCTTGTTGCCAGAGAGTG 60.290 50.000 0.00 0.00 0.00 3.51
280 281 1.980765 TGGATCTTGTTGCCAGAGAGT 59.019 47.619 0.00 0.00 0.00 3.24
281 282 2.775911 TGGATCTTGTTGCCAGAGAG 57.224 50.000 0.00 0.00 0.00 3.20
282 283 3.507162 TTTGGATCTTGTTGCCAGAGA 57.493 42.857 0.00 0.00 32.47 3.10
283 284 5.188434 TCTATTTGGATCTTGTTGCCAGAG 58.812 41.667 0.00 0.00 32.47 3.35
284 285 5.178096 TCTATTTGGATCTTGTTGCCAGA 57.822 39.130 0.00 0.00 32.47 3.86
285 286 5.359009 ACATCTATTTGGATCTTGTTGCCAG 59.641 40.000 0.00 0.00 32.47 4.85
286 287 5.125900 CACATCTATTTGGATCTTGTTGCCA 59.874 40.000 0.00 0.00 0.00 4.92
287 288 5.126061 ACACATCTATTTGGATCTTGTTGCC 59.874 40.000 0.00 0.00 0.00 4.52
288 289 6.094603 AGACACATCTATTTGGATCTTGTTGC 59.905 38.462 0.00 0.00 31.46 4.17
289 290 7.621428 AGACACATCTATTTGGATCTTGTTG 57.379 36.000 0.00 0.00 31.46 3.33
290 291 8.543774 ACTAGACACATCTATTTGGATCTTGTT 58.456 33.333 0.00 0.00 36.81 2.83
291 292 8.083828 ACTAGACACATCTATTTGGATCTTGT 57.916 34.615 0.00 0.00 36.81 3.16
292 293 8.824781 CAACTAGACACATCTATTTGGATCTTG 58.175 37.037 0.00 0.00 41.25 3.02
293 294 7.497249 GCAACTAGACACATCTATTTGGATCTT 59.503 37.037 13.22 0.00 43.40 2.40
294 295 6.989169 GCAACTAGACACATCTATTTGGATCT 59.011 38.462 13.22 0.00 43.40 2.75
295 296 6.763135 TGCAACTAGACACATCTATTTGGATC 59.237 38.462 13.22 0.00 43.40 3.36
296 297 6.540189 GTGCAACTAGACACATCTATTTGGAT 59.460 38.462 13.22 0.00 44.52 3.41
297 298 5.874810 GTGCAACTAGACACATCTATTTGGA 59.125 40.000 13.22 9.37 43.40 3.53
298 299 6.111768 GTGCAACTAGACACATCTATTTGG 57.888 41.667 13.22 0.92 43.40 3.28
316 317 2.029739 TCGAGGAATCGTTGTAGTGCAA 60.030 45.455 0.00 0.00 34.16 4.08
317 318 1.542472 TCGAGGAATCGTTGTAGTGCA 59.458 47.619 0.00 0.00 0.00 4.57
318 319 2.273370 TCGAGGAATCGTTGTAGTGC 57.727 50.000 0.00 0.00 0.00 4.40
319 320 3.797256 GGAATCGAGGAATCGTTGTAGTG 59.203 47.826 0.00 0.00 0.00 2.74
320 321 3.700038 AGGAATCGAGGAATCGTTGTAGT 59.300 43.478 0.00 0.00 0.00 2.73
321 322 4.036971 AGAGGAATCGAGGAATCGTTGTAG 59.963 45.833 0.00 0.00 0.00 2.74
322 323 3.952323 AGAGGAATCGAGGAATCGTTGTA 59.048 43.478 0.00 0.00 0.00 2.41
323 324 2.761208 AGAGGAATCGAGGAATCGTTGT 59.239 45.455 0.00 0.00 0.00 3.32
324 325 3.444703 AGAGGAATCGAGGAATCGTTG 57.555 47.619 0.00 0.00 0.00 4.10
325 326 5.452077 CCTTAAGAGGAATCGAGGAATCGTT 60.452 44.000 3.36 0.00 46.74 3.85
326 327 4.038162 CCTTAAGAGGAATCGAGGAATCGT 59.962 45.833 3.36 0.00 46.74 3.73
327 328 4.551388 CCTTAAGAGGAATCGAGGAATCG 58.449 47.826 3.36 0.00 46.74 3.34
328 329 4.202264 TGCCTTAAGAGGAATCGAGGAATC 60.202 45.833 3.36 0.00 46.74 2.52
329 330 3.711704 TGCCTTAAGAGGAATCGAGGAAT 59.288 43.478 3.36 0.00 46.74 3.01
330 331 3.104512 TGCCTTAAGAGGAATCGAGGAA 58.895 45.455 3.36 0.00 46.74 3.36
331 332 2.747177 TGCCTTAAGAGGAATCGAGGA 58.253 47.619 3.36 0.00 46.74 3.71
332 333 3.070159 TCATGCCTTAAGAGGAATCGAGG 59.930 47.826 3.36 0.00 46.74 4.63
333 334 4.202202 ACTCATGCCTTAAGAGGAATCGAG 60.202 45.833 3.36 2.41 46.74 4.04
334 335 3.706594 ACTCATGCCTTAAGAGGAATCGA 59.293 43.478 3.36 0.00 46.74 3.59
335 336 4.065321 ACTCATGCCTTAAGAGGAATCG 57.935 45.455 3.36 0.00 46.74 3.34
336 337 5.189180 ACAACTCATGCCTTAAGAGGAATC 58.811 41.667 3.36 0.00 46.74 2.52
337 338 5.184892 ACAACTCATGCCTTAAGAGGAAT 57.815 39.130 3.36 0.00 46.74 3.01
338 339 4.565652 GGACAACTCATGCCTTAAGAGGAA 60.566 45.833 3.36 0.00 46.74 3.36
339 340 3.055094 GGACAACTCATGCCTTAAGAGGA 60.055 47.826 3.36 0.00 46.74 3.71
340 341 3.274288 GGACAACTCATGCCTTAAGAGG 58.726 50.000 3.36 0.00 46.50 3.69
341 342 2.932614 CGGACAACTCATGCCTTAAGAG 59.067 50.000 3.36 0.00 35.56 2.85
342 343 2.935238 GCGGACAACTCATGCCTTAAGA 60.935 50.000 3.36 0.00 0.00 2.10
343 344 1.398390 GCGGACAACTCATGCCTTAAG 59.602 52.381 0.00 0.00 0.00 1.85
344 345 1.448985 GCGGACAACTCATGCCTTAA 58.551 50.000 0.00 0.00 0.00 1.85
345 346 0.392461 GGCGGACAACTCATGCCTTA 60.392 55.000 0.00 0.00 42.44 2.69
346 347 1.675641 GGCGGACAACTCATGCCTT 60.676 57.895 0.00 0.00 42.44 4.35
347 348 2.045926 GGCGGACAACTCATGCCT 60.046 61.111 0.00 0.00 42.44 4.75
348 349 1.926511 CTTGGCGGACAACTCATGCC 61.927 60.000 0.00 0.00 45.91 4.40
349 350 1.237285 ACTTGGCGGACAACTCATGC 61.237 55.000 0.00 0.00 34.76 4.06
350 351 0.798776 GACTTGGCGGACAACTCATG 59.201 55.000 0.00 0.00 34.76 3.07
351 352 0.321653 GGACTTGGCGGACAACTCAT 60.322 55.000 0.00 0.00 34.76 2.90
352 353 1.070786 GGACTTGGCGGACAACTCA 59.929 57.895 0.00 0.00 34.76 3.41
353 354 0.951040 CTGGACTTGGCGGACAACTC 60.951 60.000 0.00 0.00 34.76 3.01
354 355 1.071471 CTGGACTTGGCGGACAACT 59.929 57.895 0.00 0.00 34.76 3.16
355 356 0.034337 TACTGGACTTGGCGGACAAC 59.966 55.000 0.00 0.00 34.76 3.32
356 357 0.034337 GTACTGGACTTGGCGGACAA 59.966 55.000 0.00 0.00 37.55 3.18
357 358 1.116536 TGTACTGGACTTGGCGGACA 61.117 55.000 0.00 0.00 0.00 4.02
358 359 0.034337 TTGTACTGGACTTGGCGGAC 59.966 55.000 0.00 0.00 0.00 4.79
365 366 3.181463 TGCGGTAACTTTGTACTGGACTT 60.181 43.478 0.00 0.00 31.96 3.01
372 373 2.613133 TGGTTGTGCGGTAACTTTGTAC 59.387 45.455 0.00 0.00 0.00 2.90
376 377 3.442273 CCATATGGTTGTGCGGTAACTTT 59.558 43.478 14.09 0.00 0.00 2.66
383 384 1.238439 GGATCCATATGGTTGTGCGG 58.762 55.000 21.28 0.00 36.34 5.69
390 391 6.725101 AATGATAAGGTGGATCCATATGGT 57.275 37.500 19.62 8.97 39.02 3.55
486 804 8.726988 CCTTCGGACAACATTTATCTCTTTTAA 58.273 33.333 0.00 0.00 0.00 1.52
487 805 7.881232 ACCTTCGGACAACATTTATCTCTTTTA 59.119 33.333 0.00 0.00 0.00 1.52
508 826 0.384353 GTTGCGAGTTTGCGACCTTC 60.384 55.000 0.88 0.00 42.35 3.46
516 834 1.459592 CCTACTTCCGTTGCGAGTTTG 59.540 52.381 0.00 0.00 0.00 2.93
527 845 0.100861 GCTCGGTTCTCCTACTTCCG 59.899 60.000 0.00 0.00 42.12 4.30
560 906 1.661112 GTATGTCCAAAGTGAGCTCGC 59.339 52.381 19.76 19.76 0.00 5.03
569 915 2.771943 TCAGCCCTAGGTATGTCCAAAG 59.228 50.000 8.29 0.00 39.02 2.77
572 918 2.116238 GTTCAGCCCTAGGTATGTCCA 58.884 52.381 8.29 0.00 39.02 4.02
596 942 0.811616 CGCTAGATCCTGGCCAACAC 60.812 60.000 7.01 0.00 34.43 3.32
597 943 1.522092 CGCTAGATCCTGGCCAACA 59.478 57.895 7.01 0.00 34.43 3.33
598 944 1.227674 CCGCTAGATCCTGGCCAAC 60.228 63.158 7.01 0.00 34.43 3.77
619 969 6.995091 GGCAATAATCTGTCATAGTTCCTCTT 59.005 38.462 0.00 0.00 0.00 2.85
630 980 6.839124 ACAATCTTTGGCAATAATCTGTCA 57.161 33.333 0.00 0.00 34.12 3.58
673 1027 3.317603 TTACGGGTAAAGAGGGTTTCG 57.682 47.619 0.00 0.00 0.00 3.46
735 1090 6.569780 AGTTCATTAGTGTACATCGTATGCA 58.430 36.000 0.00 0.00 0.00 3.96
736 1091 7.337718 CAAGTTCATTAGTGTACATCGTATGC 58.662 38.462 0.00 0.00 0.00 3.14
737 1092 7.704899 TCCAAGTTCATTAGTGTACATCGTATG 59.295 37.037 0.00 1.64 0.00 2.39
822 1182 6.631016 TGAGCTGTCTACTTTAGGTATTGTG 58.369 40.000 0.00 0.00 0.00 3.33
858 1218 6.268617 TGAATCATTTGTGGGACCATTTTGTA 59.731 34.615 0.00 0.00 0.00 2.41
859 1219 5.071519 TGAATCATTTGTGGGACCATTTTGT 59.928 36.000 0.00 0.00 0.00 2.83
860 1220 5.549347 TGAATCATTTGTGGGACCATTTTG 58.451 37.500 0.00 0.00 0.00 2.44
947 1307 2.552367 GAAGGAGGAGGAGGAAAAGGA 58.448 52.381 0.00 0.00 0.00 3.36
960 1320 6.768381 GGTAATTGAGTGATTTAGGAAGGAGG 59.232 42.308 0.00 0.00 0.00 4.30
989 1349 5.290493 TGAGAACGGCATGATAAGGTTAT 57.710 39.130 0.00 0.00 0.00 1.89
992 1352 2.158900 CCTGAGAACGGCATGATAAGGT 60.159 50.000 0.00 0.00 0.00 3.50
1012 1372 2.902457 TTTGGAGGGAGGCCGAACC 61.902 63.158 0.00 0.24 39.61 3.62
1020 1380 1.741770 CGCGAAGGTTTGGAGGGAG 60.742 63.158 0.00 0.00 0.00 4.30
1030 1390 2.034879 CATTCTGTGGCGCGAAGGT 61.035 57.895 12.10 0.00 0.00 3.50
1044 1404 0.388907 TCGTTCCGAACCCGTCATTC 60.389 55.000 5.67 0.00 31.06 2.67
1156 1516 3.148279 GAGCCTCCGGTCGTCCAT 61.148 66.667 0.00 0.00 0.00 3.41
1158 1518 3.827898 CTGAGCCTCCGGTCGTCC 61.828 72.222 0.00 0.00 39.47 4.79
1377 1737 4.681978 GCCGCCACCTCAAGACGT 62.682 66.667 0.00 0.00 0.00 4.34
1380 1740 2.244117 GATGAGCCGCCACCTCAAGA 62.244 60.000 0.00 0.00 42.12 3.02
1383 1743 4.147449 CGATGAGCCGCCACCTCA 62.147 66.667 0.00 0.00 42.91 3.86
1479 1839 2.242572 CCATCAGCTCCACGCGATG 61.243 63.158 15.93 7.49 45.59 3.84
1505 1865 3.744749 ATGATGCATGCACGCACGC 62.745 57.895 25.37 5.99 46.56 5.34
1506 1866 1.937362 CATGATGCATGCACGCACG 60.937 57.895 25.37 13.30 46.56 5.34
1507 1867 3.991621 CATGATGCATGCACGCAC 58.008 55.556 25.37 14.95 46.56 5.34
1716 2077 3.689161 TGCCTTCATTGGTCACGAATTAG 59.311 43.478 0.00 0.00 0.00 1.73
1766 2136 9.715121 CACAAGGTTTAGAGTTTGGTATAGTAA 57.285 33.333 0.00 0.00 0.00 2.24
1767 2137 8.873144 ACACAAGGTTTAGAGTTTGGTATAGTA 58.127 33.333 0.00 0.00 0.00 1.82
1772 2142 5.370679 GGACACAAGGTTTAGAGTTTGGTA 58.629 41.667 0.00 0.00 0.00 3.25
1778 2148 2.288030 CGACGGACACAAGGTTTAGAGT 60.288 50.000 0.00 0.00 0.00 3.24
1779 2149 2.030540 TCGACGGACACAAGGTTTAGAG 60.031 50.000 0.00 0.00 0.00 2.43
1834 2211 2.288213 TGCTACGTGAACCACTGAAGAG 60.288 50.000 0.00 0.00 31.34 2.85
1836 2213 2.148916 TGCTACGTGAACCACTGAAG 57.851 50.000 0.00 0.00 31.34 3.02
1839 2216 2.078849 TGATGCTACGTGAACCACTG 57.921 50.000 0.00 0.00 31.34 3.66
1840 2217 3.262420 GAATGATGCTACGTGAACCACT 58.738 45.455 0.00 0.00 31.34 4.00
1841 2218 3.000041 TGAATGATGCTACGTGAACCAC 59.000 45.455 0.00 0.00 0.00 4.16
1843 2220 3.062639 CACTGAATGATGCTACGTGAACC 59.937 47.826 0.00 0.00 0.00 3.62
1844 2221 3.062639 CCACTGAATGATGCTACGTGAAC 59.937 47.826 0.00 0.00 0.00 3.18
1845 2222 3.261580 CCACTGAATGATGCTACGTGAA 58.738 45.455 0.00 0.00 0.00 3.18
1846 2223 2.233676 ACCACTGAATGATGCTACGTGA 59.766 45.455 0.00 0.00 0.00 4.35
1847 2224 2.621338 ACCACTGAATGATGCTACGTG 58.379 47.619 0.00 0.00 0.00 4.49
1848 2225 3.055819 AGAACCACTGAATGATGCTACGT 60.056 43.478 0.00 0.00 0.00 3.57
1849 2226 3.525537 AGAACCACTGAATGATGCTACG 58.474 45.455 0.00 0.00 0.00 3.51
1896 2305 6.072175 ACCACTATTTATGCGTTGTTGTTGAT 60.072 34.615 0.00 0.00 0.00 2.57
1897 2306 5.239744 ACCACTATTTATGCGTTGTTGTTGA 59.760 36.000 0.00 0.00 0.00 3.18
1898 2307 5.457140 ACCACTATTTATGCGTTGTTGTTG 58.543 37.500 0.00 0.00 0.00 3.33
1900 2309 5.001232 AGACCACTATTTATGCGTTGTTGT 58.999 37.500 0.00 0.00 0.00 3.32
1901 2310 5.545658 AGACCACTATTTATGCGTTGTTG 57.454 39.130 0.00 0.00 0.00 3.33
1903 2312 7.859325 ATTTAGACCACTATTTATGCGTTGT 57.141 32.000 0.00 0.00 0.00 3.32
1904 2313 8.394877 TCAATTTAGACCACTATTTATGCGTTG 58.605 33.333 0.00 0.00 0.00 4.10
1942 2351 6.708885 ATAGAGATTAATGGCCAAGATCCA 57.291 37.500 10.96 2.82 38.09 3.41
1954 2363 7.415765 CGATCGCCTCCACTAATAGAGATTAAT 60.416 40.741 0.26 0.00 31.43 1.40
1960 2369 3.075148 TCGATCGCCTCCACTAATAGAG 58.925 50.000 11.09 0.00 0.00 2.43
1961 2370 2.812591 GTCGATCGCCTCCACTAATAGA 59.187 50.000 11.09 0.00 0.00 1.98
1962 2371 2.552743 TGTCGATCGCCTCCACTAATAG 59.447 50.000 11.09 0.00 0.00 1.73
1963 2372 2.578786 TGTCGATCGCCTCCACTAATA 58.421 47.619 11.09 0.00 0.00 0.98
1983 2405 1.763968 TGGGACTCGATCGACAGATT 58.236 50.000 15.15 0.00 37.19 2.40
1989 2411 1.341209 CCAATCATGGGACTCGATCGA 59.659 52.381 18.32 18.32 43.51 3.59
1990 2412 1.788258 CCAATCATGGGACTCGATCG 58.212 55.000 9.36 9.36 43.51 3.69
2105 2534 1.064952 GGGCCGCACATTACATTACAC 59.935 52.381 0.00 0.00 0.00 2.90
2289 2718 0.752658 AATCAGATGCGATCACCCGA 59.247 50.000 0.00 0.00 0.00 5.14
2291 2720 2.417933 GCATAATCAGATGCGATCACCC 59.582 50.000 0.00 0.00 42.63 4.61
2304 2733 5.820423 AGGTATGTAACGCAAAGCATAATCA 59.180 36.000 0.00 0.00 0.00 2.57
2321 2750 5.579718 CGACGAGTTGAGATTAAGGTATGT 58.420 41.667 0.00 0.00 0.00 2.29
2337 2768 0.391597 TTCCTTTCCTTGCGACGAGT 59.608 50.000 0.00 0.00 0.00 4.18
2348 2779 3.181513 GCCGAGATTACGTTTTCCTTTCC 60.182 47.826 0.00 0.00 0.00 3.13
2360 2791 2.588034 GCACCGGGCCGAGATTAC 60.588 66.667 30.79 6.55 36.11 1.89
2391 2822 6.748132 AGATTGGAAATTTCTCTCGCAAAAA 58.252 32.000 17.42 0.75 0.00 1.94
2392 2823 6.331369 AGATTGGAAATTTCTCTCGCAAAA 57.669 33.333 17.42 1.64 0.00 2.44
2393 2824 5.964958 AGATTGGAAATTTCTCTCGCAAA 57.035 34.783 17.42 2.84 0.00 3.68
2394 2825 7.336679 TGAATAGATTGGAAATTTCTCTCGCAA 59.663 33.333 17.42 12.51 0.00 4.85
2395 2826 6.823182 TGAATAGATTGGAAATTTCTCTCGCA 59.177 34.615 17.42 4.24 0.00 5.10
2396 2827 7.251704 TGAATAGATTGGAAATTTCTCTCGC 57.748 36.000 17.42 1.61 0.00 5.03
2397 2828 9.049523 TGATGAATAGATTGGAAATTTCTCTCG 57.950 33.333 17.42 0.00 0.00 4.04
2405 2836 8.311836 GCCATGATTGATGAATAGATTGGAAAT 58.688 33.333 0.00 0.00 33.31 2.17
2406 2837 7.288158 TGCCATGATTGATGAATAGATTGGAAA 59.712 33.333 0.00 0.00 33.31 3.13
2407 2838 6.778559 TGCCATGATTGATGAATAGATTGGAA 59.221 34.615 0.00 0.00 33.31 3.53
2408 2839 6.308566 TGCCATGATTGATGAATAGATTGGA 58.691 36.000 0.00 0.00 33.31 3.53
2409 2840 6.208797 ACTGCCATGATTGATGAATAGATTGG 59.791 38.462 0.00 0.00 33.31 3.16
2410 2841 7.215719 ACTGCCATGATTGATGAATAGATTG 57.784 36.000 0.00 0.00 33.31 2.67
2411 2842 7.940688 TGTACTGCCATGATTGATGAATAGATT 59.059 33.333 0.00 0.00 33.31 2.40
2412 2843 7.455891 TGTACTGCCATGATTGATGAATAGAT 58.544 34.615 0.00 0.00 33.31 1.98
2413 2844 6.829849 TGTACTGCCATGATTGATGAATAGA 58.170 36.000 0.00 0.00 33.31 1.98
2414 2845 6.932960 TCTGTACTGCCATGATTGATGAATAG 59.067 38.462 0.00 0.00 33.31 1.73
2415 2846 6.829849 TCTGTACTGCCATGATTGATGAATA 58.170 36.000 0.00 0.00 33.31 1.75
2416 2847 5.687780 TCTGTACTGCCATGATTGATGAAT 58.312 37.500 0.00 0.00 33.31 2.57
2417 2848 5.101648 TCTGTACTGCCATGATTGATGAA 57.898 39.130 0.00 0.00 33.31 2.57
2418 2849 4.406649 TCTCTGTACTGCCATGATTGATGA 59.593 41.667 0.00 0.00 33.31 2.92
2419 2850 4.700700 TCTCTGTACTGCCATGATTGATG 58.299 43.478 0.00 0.00 0.00 3.07
2420 2851 5.121811 GTTCTCTGTACTGCCATGATTGAT 58.878 41.667 0.00 0.00 0.00 2.57
2421 2852 4.020307 TGTTCTCTGTACTGCCATGATTGA 60.020 41.667 0.00 0.00 0.00 2.57
2422 2853 4.093998 GTGTTCTCTGTACTGCCATGATTG 59.906 45.833 0.00 0.00 0.00 2.67
2423 2854 4.256920 GTGTTCTCTGTACTGCCATGATT 58.743 43.478 0.00 0.00 0.00 2.57
2424 2855 3.261643 TGTGTTCTCTGTACTGCCATGAT 59.738 43.478 0.00 0.00 0.00 2.45
2425 2856 2.632512 TGTGTTCTCTGTACTGCCATGA 59.367 45.455 0.00 0.00 0.00 3.07
2426 2857 3.044235 TGTGTTCTCTGTACTGCCATG 57.956 47.619 0.00 0.00 0.00 3.66
2427 2858 3.324846 TCTTGTGTTCTCTGTACTGCCAT 59.675 43.478 0.00 0.00 0.00 4.40
2428 2859 2.698274 TCTTGTGTTCTCTGTACTGCCA 59.302 45.455 0.00 0.00 0.00 4.92
2429 2860 3.060602 GTCTTGTGTTCTCTGTACTGCC 58.939 50.000 0.00 0.00 0.00 4.85
2430 2861 3.491267 GTGTCTTGTGTTCTCTGTACTGC 59.509 47.826 0.00 0.00 0.00 4.40
2431 2862 3.731216 CGTGTCTTGTGTTCTCTGTACTG 59.269 47.826 0.00 0.00 0.00 2.74
2432 2863 3.380637 ACGTGTCTTGTGTTCTCTGTACT 59.619 43.478 0.00 0.00 0.00 2.73
2433 2864 3.703420 ACGTGTCTTGTGTTCTCTGTAC 58.297 45.455 0.00 0.00 0.00 2.90
2434 2865 3.243301 GGACGTGTCTTGTGTTCTCTGTA 60.243 47.826 0.00 0.00 0.00 2.74
2435 2866 2.481449 GGACGTGTCTTGTGTTCTCTGT 60.481 50.000 0.00 0.00 0.00 3.41
2436 2867 2.128035 GGACGTGTCTTGTGTTCTCTG 58.872 52.381 0.00 0.00 0.00 3.35
2437 2868 1.754803 TGGACGTGTCTTGTGTTCTCT 59.245 47.619 0.00 0.00 0.00 3.10
2438 2869 2.218953 TGGACGTGTCTTGTGTTCTC 57.781 50.000 0.00 0.00 0.00 2.87
2439 2870 2.093658 AGTTGGACGTGTCTTGTGTTCT 60.094 45.455 0.00 0.00 0.00 3.01
2440 2871 2.277084 AGTTGGACGTGTCTTGTGTTC 58.723 47.619 0.00 0.00 0.00 3.18
2441 2872 2.396590 AGTTGGACGTGTCTTGTGTT 57.603 45.000 0.00 0.00 0.00 3.32
2442 2873 2.396590 AAGTTGGACGTGTCTTGTGT 57.603 45.000 0.00 0.00 0.00 3.72
2443 2874 3.000925 GTGTAAGTTGGACGTGTCTTGTG 59.999 47.826 0.00 0.00 0.00 3.33
2444 2875 3.118884 AGTGTAAGTTGGACGTGTCTTGT 60.119 43.478 0.00 0.00 0.00 3.16
2445 2876 3.454375 AGTGTAAGTTGGACGTGTCTTG 58.546 45.455 0.00 0.00 0.00 3.02
2446 2877 3.814005 AGTGTAAGTTGGACGTGTCTT 57.186 42.857 0.00 0.00 0.00 3.01
2447 2878 3.887716 ACTAGTGTAAGTTGGACGTGTCT 59.112 43.478 0.00 0.00 0.00 3.41
2448 2879 4.234530 ACTAGTGTAAGTTGGACGTGTC 57.765 45.455 0.00 0.00 0.00 3.67
2449 2880 4.660789 AACTAGTGTAAGTTGGACGTGT 57.339 40.909 0.00 0.00 38.28 4.49
2450 2881 6.618811 AGATAACTAGTGTAAGTTGGACGTG 58.381 40.000 0.00 0.00 39.95 4.49
2451 2882 6.830873 AGATAACTAGTGTAAGTTGGACGT 57.169 37.500 0.00 0.00 39.95 4.34
2452 2883 7.536855 AGAAGATAACTAGTGTAAGTTGGACG 58.463 38.462 0.00 0.00 39.95 4.79
2453 2884 9.356433 GAAGAAGATAACTAGTGTAAGTTGGAC 57.644 37.037 0.00 0.00 39.95 4.02
2454 2885 8.242053 CGAAGAAGATAACTAGTGTAAGTTGGA 58.758 37.037 0.00 0.00 39.95 3.53
2455 2886 8.027771 ACGAAGAAGATAACTAGTGTAAGTTGG 58.972 37.037 0.00 0.00 39.95 3.77
2456 2887 8.851416 CACGAAGAAGATAACTAGTGTAAGTTG 58.149 37.037 0.00 0.00 39.95 3.16
2457 2888 8.790718 TCACGAAGAAGATAACTAGTGTAAGTT 58.209 33.333 0.00 0.00 42.31 2.66
2458 2889 8.332996 TCACGAAGAAGATAACTAGTGTAAGT 57.667 34.615 0.00 0.00 32.36 2.24
2459 2890 9.227490 CATCACGAAGAAGATAACTAGTGTAAG 57.773 37.037 0.00 0.00 32.36 2.34
2460 2891 8.953313 TCATCACGAAGAAGATAACTAGTGTAA 58.047 33.333 0.00 0.00 32.36 2.41
2461 2892 8.502105 TCATCACGAAGAAGATAACTAGTGTA 57.498 34.615 0.00 0.00 32.36 2.90
2462 2893 7.392494 TCATCACGAAGAAGATAACTAGTGT 57.608 36.000 0.00 0.00 32.36 3.55
2463 2894 7.380870 CCATCATCACGAAGAAGATAACTAGTG 59.619 40.741 0.00 0.00 33.18 2.74
2464 2895 7.285629 TCCATCATCACGAAGAAGATAACTAGT 59.714 37.037 0.00 0.00 33.18 2.57
2465 2896 7.652727 TCCATCATCACGAAGAAGATAACTAG 58.347 38.462 0.00 0.00 33.18 2.57
2466 2897 7.582667 TCCATCATCACGAAGAAGATAACTA 57.417 36.000 0.00 0.00 33.18 2.24
2467 2898 6.471233 TCCATCATCACGAAGAAGATAACT 57.529 37.500 0.00 0.00 33.18 2.24
2468 2899 6.758886 AGTTCCATCATCACGAAGAAGATAAC 59.241 38.462 0.00 0.00 33.18 1.89
2469 2900 6.878317 AGTTCCATCATCACGAAGAAGATAA 58.122 36.000 0.00 0.00 33.18 1.75
2470 2901 6.471233 AGTTCCATCATCACGAAGAAGATA 57.529 37.500 0.00 0.00 33.18 1.98
2471 2902 5.350504 AGTTCCATCATCACGAAGAAGAT 57.649 39.130 0.00 0.00 35.17 2.40
2472 2903 4.808414 AGTTCCATCATCACGAAGAAGA 57.192 40.909 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.