Multiple sequence alignment - TraesCS4A01G282900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G282900 chr4A 100.000 7070 0 0 1 7070 590118974 590111905 0.000000e+00 13056.0
1 TraesCS4A01G282900 chr4A 89.039 1706 135 24 1907 3607 590185190 590183532 0.000000e+00 2067.0
2 TraesCS4A01G282900 chr4A 86.705 1038 88 26 3517 4530 590183544 590182533 0.000000e+00 1107.0
3 TraesCS4A01G282900 chr4A 88.847 798 65 16 5162 5941 590181908 590181117 0.000000e+00 959.0
4 TraesCS4A01G282900 chr4A 86.654 517 40 12 4625 5139 590182474 590181985 4.820000e-151 545.0
5 TraesCS4A01G282900 chr4A 89.095 431 38 6 1439 1867 590185615 590185192 1.750000e-145 527.0
6 TraesCS4A01G282900 chr4A 90.726 248 22 1 899 1145 590186297 590186050 5.290000e-86 329.0
7 TraesCS4A01G282900 chr4A 91.228 171 12 3 1175 1343 590185984 590185815 5.520000e-56 230.0
8 TraesCS4A01G282900 chr4A 88.535 157 8 7 437 585 590118167 590118013 1.570000e-41 182.0
9 TraesCS4A01G282900 chr4A 88.535 157 8 7 808 962 590118538 590118390 1.570000e-41 182.0
10 TraesCS4A01G282900 chr4A 91.304 92 7 1 6037 6127 590180951 590180860 2.680000e-24 124.0
11 TraesCS4A01G282900 chr4B 92.934 1755 85 17 1894 3638 23013514 23011789 0.000000e+00 2518.0
12 TraesCS4A01G282900 chr4B 88.248 1855 124 45 52 1900 23015399 23013633 0.000000e+00 2132.0
13 TraesCS4A01G282900 chr4B 88.018 1135 84 20 5731 6830 23009564 23008447 0.000000e+00 1295.0
14 TraesCS4A01G282900 chr4B 90.670 836 62 8 3710 4530 23011686 23010852 0.000000e+00 1098.0
15 TraesCS4A01G282900 chr4B 86.017 801 85 21 5153 5941 22734088 22733303 0.000000e+00 833.0
16 TraesCS4A01G282900 chr4B 90.304 526 36 10 4625 5147 23010794 23010281 0.000000e+00 675.0
17 TraesCS4A01G282900 chr4B 86.847 593 57 13 5162 5746 23010202 23009623 1.660000e-180 643.0
18 TraesCS4A01G282900 chr4B 77.320 388 48 15 5951 6318 22861274 22861641 7.240000e-45 193.0
19 TraesCS4A01G282900 chr4B 85.027 187 7 3 6618 6799 22861996 22862166 3.390000e-38 171.0
20 TraesCS4A01G282900 chr4B 83.969 131 16 5 5010 5139 22734286 22734160 3.460000e-23 121.0
21 TraesCS4A01G282900 chr4B 79.487 156 10 6 807 962 23015047 23014914 2.720000e-14 91.6
22 TraesCS4A01G282900 chr4B 93.333 60 3 1 359 418 23014919 23014861 3.510000e-13 87.9
23 TraesCS4A01G282900 chr4D 87.953 1710 135 40 1906 3607 12460150 12461796 0.000000e+00 1951.0
24 TraesCS4A01G282900 chr4D 85.884 1601 127 41 3517 5076 12461784 12463326 0.000000e+00 1613.0
25 TraesCS4A01G282900 chr4D 89.041 803 68 14 5153 5941 12463453 12464249 0.000000e+00 977.0
26 TraesCS4A01G282900 chr4D 86.486 851 71 22 4 841 12503977 12504796 0.000000e+00 894.0
27 TraesCS4A01G282900 chr4D 85.940 697 67 24 1175 1869 12459484 12460151 0.000000e+00 715.0
28 TraesCS4A01G282900 chr4D 89.815 540 43 8 6297 6826 12519070 12519607 0.000000e+00 682.0
29 TraesCS4A01G282900 chr4D 89.310 290 19 6 877 1162 12459151 12459432 3.140000e-93 353.0
30 TraesCS4A01G282900 chr4D 83.420 193 21 8 6037 6219 12464415 12464606 1.220000e-37 169.0
31 TraesCS4A01G282900 chr4D 85.806 155 17 3 808 962 12504402 12504551 7.340000e-35 159.0
32 TraesCS4A01G282900 chr4D 88.785 107 4 3 4 110 12508109 12508207 2.680000e-24 124.0
33 TraesCS4A01G282900 chr4D 86.957 92 3 8 499 585 12459149 12459236 2.100000e-15 95.3
34 TraesCS4A01G282900 chr5D 74.133 692 128 33 4699 5366 7015678 7015014 9.170000e-59 239.0
35 TraesCS4A01G282900 chr5A 78.016 373 58 16 4699 5060 2972120 2971761 5.560000e-51 213.0
36 TraesCS4A01G282900 chr5A 77.748 373 59 16 4699 5060 2895363 2895004 2.580000e-49 207.0
37 TraesCS4A01G282900 chr5A 80.412 194 38 0 5173 5366 2894864 2894671 1.590000e-31 148.0
38 TraesCS4A01G282900 chr5A 79.897 194 39 0 5173 5366 2971621 2971428 7.390000e-30 143.0
39 TraesCS4A01G282900 chrUn 77.632 380 61 14 4699 5068 65429763 65430128 7.190000e-50 209.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G282900 chr4A 590111905 590118974 7069 True 4473.333333 13056 92.356667 1 7070 3 chr4A.!!$R1 7069
1 TraesCS4A01G282900 chr4A 590180860 590186297 5437 True 736.000000 2067 89.199750 899 6127 8 chr4A.!!$R2 5228
2 TraesCS4A01G282900 chr4B 23008447 23015399 6952 True 1067.562500 2518 88.730125 52 6830 8 chr4B.!!$R2 6778
3 TraesCS4A01G282900 chr4B 22733303 22734286 983 True 477.000000 833 84.993000 5010 5941 2 chr4B.!!$R1 931
4 TraesCS4A01G282900 chr4D 12459149 12464606 5457 False 839.042857 1951 86.929286 499 6219 7 chr4D.!!$F2 5720
5 TraesCS4A01G282900 chr4D 12519070 12519607 537 False 682.000000 682 89.815000 6297 6826 1 chr4D.!!$F1 529
6 TraesCS4A01G282900 chr4D 12503977 12508207 4230 False 392.333333 894 87.025667 4 962 3 chr4D.!!$F3 958
7 TraesCS4A01G282900 chr5D 7015014 7015678 664 True 239.000000 239 74.133000 4699 5366 1 chr5D.!!$R1 667

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 159 0.535102 GTGGATGGATTAGCACGGGG 60.535 60.0 0.00 0.00 0.00 5.73 F
2107 3217 0.248621 GCAACTGGTGTGCACACTTC 60.249 55.0 40.20 28.47 45.73 3.01 F
3011 4135 0.834687 TCCTGCCGTTCAACCCTACT 60.835 55.0 0.00 0.00 0.00 2.57 F
3552 4755 0.249741 ACACACACTACCGGTTGAGC 60.250 55.0 23.12 0.00 0.00 4.26 F
4196 5626 0.175302 AGCGAGGAGTGCTTCTGATG 59.825 55.0 0.00 0.00 40.48 3.07 F
5613 7798 0.175073 AGTTCTTCACCCGATACGCC 59.825 55.0 0.00 0.00 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2125 3235 0.313043 GTTGGTGGAGTCGACGAGAA 59.687 55.0 10.46 0.0 0.00 2.87 R
3261 4388 0.031721 AAGTGACCGAAGTCCACGTC 59.968 55.0 0.00 0.0 42.81 4.34 R
4168 5598 0.390866 CACTCCTCGCTGCATCTGTT 60.391 55.0 0.00 0.0 0.00 3.16 R
5549 7734 0.108756 GACGAGGTTGTAGAGCCACC 60.109 60.0 0.00 0.0 0.00 4.61 R
5786 8050 0.324091 CCCTCTCTTGCTGGCCAAAT 60.324 55.0 7.01 0.0 31.94 2.32 R
6525 9173 0.034616 AGCTCTTTTCTGCAGCGACT 59.965 50.0 9.47 0.0 38.26 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.755064 CATGACCATGGCCGGCAA 60.755 61.111 30.85 20.37 35.24 4.52
21 22 2.440796 ATGACCATGGCCGGCAAG 60.441 61.111 30.85 16.91 0.00 4.01
50 56 1.592400 AATCGACGCCGTCCTCAAGA 61.592 55.000 12.26 2.80 37.05 3.02
70 76 1.120530 AGGCCGTCGATCTGGTAATT 58.879 50.000 0.00 0.00 0.00 1.40
74 80 3.492137 GGCCGTCGATCTGGTAATTAGTT 60.492 47.826 0.00 0.00 0.00 2.24
82 88 7.333672 GTCGATCTGGTAATTAGTTGGTTCTTT 59.666 37.037 0.00 0.00 0.00 2.52
102 108 5.740099 TCTTTTGGTTTTTCGTTAGCTTTCG 59.260 36.000 0.00 0.00 0.00 3.46
125 131 1.803519 GGTCTCGTCTCTGCGCTTG 60.804 63.158 9.73 1.08 0.00 4.01
136 142 3.204827 GCGCTTGCCGATGTGGAT 61.205 61.111 0.00 0.00 42.00 3.41
150 159 0.535102 GTGGATGGATTAGCACGGGG 60.535 60.000 0.00 0.00 0.00 5.73
205 214 2.673687 CCGCCGCTGGGGTTTTTA 60.674 61.111 12.70 0.00 39.68 1.52
206 215 2.564458 CGCCGCTGGGGTTTTTAC 59.436 61.111 12.70 0.00 38.44 2.01
207 216 2.967397 GCCGCTGGGGTTTTTACC 59.033 61.111 12.70 0.00 38.44 2.85
208 217 2.985117 GCCGCTGGGGTTTTTACCG 61.985 63.158 12.70 0.00 38.44 4.02
209 218 2.337246 CCGCTGGGGTTTTTACCGG 61.337 63.158 0.00 0.00 36.18 5.28
210 219 2.337246 CGCTGGGGTTTTTACCGGG 61.337 63.158 6.32 0.00 33.62 5.73
211 220 2.642254 GCTGGGGTTTTTACCGGGC 61.642 63.158 6.32 0.00 33.62 6.13
212 221 2.282321 TGGGGTTTTTACCGGGCG 60.282 61.111 6.32 0.00 0.00 6.13
213 222 2.282391 GGGGTTTTTACCGGGCGT 60.282 61.111 6.32 0.00 0.00 5.68
214 223 1.902918 GGGGTTTTTACCGGGCGTT 60.903 57.895 6.32 0.00 0.00 4.84
268 277 6.695278 CCTCTTCTTGTAGATCGATTCTTGTC 59.305 42.308 0.00 0.00 35.79 3.18
282 291 3.615509 TTGTCCGGGGTGCCGATTC 62.616 63.158 0.00 0.00 34.88 2.52
339 348 4.111577 TCTAGAATCACACCCCCAAATCT 58.888 43.478 0.00 0.00 0.00 2.40
354 364 5.170748 CCCAAATCTTAGCAACATTTCACC 58.829 41.667 0.00 0.00 0.00 4.02
536 550 6.879400 TCTTATAGCTTGGTTCTTCCTCTTC 58.121 40.000 0.00 0.00 37.07 2.87
599 613 5.675684 TCAAATTTCCCCCAAATCTTAGC 57.324 39.130 0.00 0.00 33.16 3.09
600 614 5.090139 TCAAATTTCCCCCAAATCTTAGCA 58.910 37.500 0.00 0.00 33.16 3.49
666 680 6.458210 CCTCACAGTTTTATGGCTTTGATTT 58.542 36.000 0.00 0.00 0.00 2.17
675 689 8.942924 GTTTTATGGCTTTGATTTTTGTTTTCG 58.057 29.630 0.00 0.00 0.00 3.46
676 690 8.425577 TTTATGGCTTTGATTTTTGTTTTCGA 57.574 26.923 0.00 0.00 0.00 3.71
677 691 5.710613 TGGCTTTGATTTTTGTTTTCGAC 57.289 34.783 0.00 0.00 0.00 4.20
679 693 4.808895 GGCTTTGATTTTTGTTTTCGACCT 59.191 37.500 0.00 0.00 0.00 3.85
680 694 5.276820 GGCTTTGATTTTTGTTTTCGACCTG 60.277 40.000 0.00 0.00 0.00 4.00
681 695 5.290885 GCTTTGATTTTTGTTTTCGACCTGT 59.709 36.000 0.00 0.00 0.00 4.00
683 697 5.317733 TGATTTTTGTTTTCGACCTGTGT 57.682 34.783 0.00 0.00 0.00 3.72
684 698 6.438259 TGATTTTTGTTTTCGACCTGTGTA 57.562 33.333 0.00 0.00 0.00 2.90
685 699 6.259638 TGATTTTTGTTTTCGACCTGTGTAC 58.740 36.000 0.00 0.00 0.00 2.90
686 700 4.619437 TTTTGTTTTCGACCTGTGTACC 57.381 40.909 0.00 0.00 0.00 3.34
687 701 1.855513 TGTTTTCGACCTGTGTACCG 58.144 50.000 0.00 0.00 0.00 4.02
690 704 1.818959 TTTCGACCTGTGTACCGGGG 61.819 60.000 6.32 0.00 44.78 5.73
692 706 3.001406 GACCTGTGTACCGGGGCT 61.001 66.667 6.32 0.00 45.37 5.19
700 716 2.762459 TACCGGGGCTGCCTGTAG 60.762 66.667 19.68 7.75 0.00 2.74
704 720 2.203266 GGGGCTGCCTGTAGATGC 60.203 66.667 19.68 0.00 0.00 3.91
710 726 2.551721 GGCTGCCTGTAGATGCATGTAT 60.552 50.000 12.43 0.00 36.79 2.29
725 746 4.467082 TGCATGTATTCTGGCTTTGGATTT 59.533 37.500 0.00 0.00 0.00 2.17
755 776 2.417719 AGCAGGTCGATCAAAGTTCAC 58.582 47.619 0.00 0.00 0.00 3.18
760 781 5.171476 CAGGTCGATCAAAGTTCACAGTAT 58.829 41.667 0.00 0.00 0.00 2.12
761 782 6.330278 CAGGTCGATCAAAGTTCACAGTATA 58.670 40.000 0.00 0.00 0.00 1.47
764 785 6.253727 GGTCGATCAAAGTTCACAGTATAGTG 59.746 42.308 6.00 6.00 40.85 2.74
792 813 5.858581 GCTCGAAATACTGATGTTTTGCTTT 59.141 36.000 0.00 0.00 0.00 3.51
801 822 9.899226 ATACTGATGTTTTGCTTTAGTCTTTTC 57.101 29.630 0.00 0.00 0.00 2.29
823 845 6.110411 TCTTTCTAACTAAAGGTGACCTGG 57.890 41.667 4.15 1.07 37.13 4.45
826 848 1.145571 AACTAAAGGTGACCTGGCCA 58.854 50.000 4.15 4.71 32.13 5.36
875 1494 9.887862 ATTATGATCCTCTGTTTAATTGGGAAT 57.112 29.630 0.00 0.00 0.00 3.01
876 1495 9.713684 TTATGATCCTCTGTTTAATTGGGAATT 57.286 29.630 0.00 0.00 34.90 2.17
877 1496 8.613922 ATGATCCTCTGTTTAATTGGGAATTT 57.386 30.769 0.00 0.00 32.38 1.82
878 1497 8.434589 TGATCCTCTGTTTAATTGGGAATTTT 57.565 30.769 0.00 0.00 32.38 1.82
879 1498 8.879227 TGATCCTCTGTTTAATTGGGAATTTTT 58.121 29.630 0.00 0.00 32.38 1.94
922 1541 1.657804 TCTTCCTCTTCTGGGTTCCC 58.342 55.000 0.12 0.12 0.00 3.97
988 1612 5.123820 TCATGCTAATGCTACTTGTTTGGAC 59.876 40.000 0.00 0.00 40.48 4.02
1002 1626 3.058293 TGTTTGGACTGCTAAAAGCGATG 60.058 43.478 0.00 0.00 46.26 3.84
1008 1632 1.732259 CTGCTAAAAGCGATGGTCGTT 59.268 47.619 1.11 0.00 46.26 3.85
1053 1677 3.679980 CGGTCGATGAAGTGTTTGAGAAT 59.320 43.478 0.00 0.00 0.00 2.40
1091 1715 1.073897 GGCTCACTTCCAAGCAGGT 59.926 57.895 0.00 0.00 40.36 4.00
1210 1951 7.709182 TGATGTTATACACTCGATTAAGTTGGG 59.291 37.037 0.00 0.00 0.00 4.12
1336 2191 0.690077 AACGGAGGGGTAAGGCCTAG 60.690 60.000 5.16 0.00 37.43 3.02
1384 2339 4.751767 AAATGTTTTGGTGTGGTGATGT 57.248 36.364 0.00 0.00 0.00 3.06
1395 2379 2.158842 TGTGGTGATGTGTGATGTGTGA 60.159 45.455 0.00 0.00 0.00 3.58
1396 2380 3.076621 GTGGTGATGTGTGATGTGTGAT 58.923 45.455 0.00 0.00 0.00 3.06
1489 2473 0.398318 ACCAGACTGGCAAGACTTCC 59.602 55.000 21.95 0.00 42.67 3.46
1501 2485 3.068873 GCAAGACTTCCTCGGTATCATCT 59.931 47.826 0.00 0.00 0.00 2.90
1509 2493 2.366916 CCTCGGTATCATCTTCCTGCTT 59.633 50.000 0.00 0.00 0.00 3.91
1523 2507 6.565234 TCTTCCTGCTTCTTATAAACTCGAG 58.435 40.000 11.84 11.84 0.00 4.04
1534 2518 6.472486 TCTTATAAACTCGAGCATCAGTTTCG 59.528 38.462 13.61 0.00 41.79 3.46
1616 2600 5.193679 AGCCAAGGTCCATATTCAACTTAC 58.806 41.667 0.00 0.00 0.00 2.34
1623 2607 7.231467 AGGTCCATATTCAACTTACTTTGTGT 58.769 34.615 0.00 0.00 0.00 3.72
1657 2642 0.447801 CCGCTGTTTCTGCATGTACC 59.552 55.000 0.00 0.00 0.00 3.34
1727 2712 0.833287 GCTGCTGGATAGGTTCTCCA 59.167 55.000 0.00 0.00 40.49 3.86
1833 2818 2.916181 GCCCGCCTCCTATACGGT 60.916 66.667 0.00 0.00 45.49 4.83
1856 2841 4.885907 TGATCCTTTGAAGATTGATCAGGC 59.114 41.667 0.00 0.00 37.49 4.85
1938 3048 4.207955 AGTCACCTTCACCTTTCCTTTTC 58.792 43.478 0.00 0.00 0.00 2.29
2073 3183 0.391661 GGTCAAGCAAGGCGAGATCA 60.392 55.000 0.00 0.00 0.00 2.92
2107 3217 0.248621 GCAACTGGTGTGCACACTTC 60.249 55.000 40.20 28.47 45.73 3.01
2125 3235 3.763671 CTTTGGAAAGGCCGCACT 58.236 55.556 0.00 0.00 40.66 4.40
2221 3334 1.996898 TGACACCGTTATCGCATTGAC 59.003 47.619 0.00 0.00 35.54 3.18
2238 3351 4.456280 TTGACTCATCGCTACATTGACT 57.544 40.909 0.00 0.00 0.00 3.41
2255 3368 6.038603 ACATTGACTTGTTCATTATCATCCGG 59.961 38.462 0.00 0.00 32.84 5.14
2261 3374 4.837972 TGTTCATTATCATCCGGTTGACA 58.162 39.130 17.33 3.00 0.00 3.58
2304 3417 3.863142 ACTTCTGCATTTGCTCCATTC 57.137 42.857 3.94 0.00 42.66 2.67
2305 3418 3.428532 ACTTCTGCATTTGCTCCATTCT 58.571 40.909 3.94 0.00 42.66 2.40
2317 3430 2.686915 GCTCCATTCTTGTGGGAATCTG 59.313 50.000 0.00 0.00 39.80 2.90
2402 3515 2.912956 TCTGGTGCTTCTAATTGGAGGT 59.087 45.455 2.93 0.00 0.00 3.85
2495 3608 2.195727 TGCATCATTCCAGGGACAGTA 58.804 47.619 0.00 0.00 0.00 2.74
2501 3618 6.595682 CATCATTCCAGGGACAGTATTAACT 58.404 40.000 0.00 0.00 35.91 2.24
2708 3827 4.433615 TCACTTGAACACTCAGTCACTTC 58.566 43.478 0.00 0.00 31.69 3.01
2720 3839 4.795268 TCAGTCACTTCGTGTTATCTCAC 58.205 43.478 0.00 0.00 34.79 3.51
2721 3840 4.277423 TCAGTCACTTCGTGTTATCTCACA 59.723 41.667 0.00 0.00 38.12 3.58
2722 3841 4.383052 CAGTCACTTCGTGTTATCTCACAC 59.617 45.833 0.00 0.00 43.23 3.82
2754 3874 5.705905 ACCTCAAAGCACTTACATACTTTCC 59.294 40.000 0.00 0.00 30.16 3.13
2784 3904 6.096282 CCAGGTTTTTGAAAAAGGAGTGACTA 59.904 38.462 2.91 0.00 0.00 2.59
2871 3991 2.508526 CAATAGTTGGGATGCTAGGCC 58.491 52.381 0.00 0.00 0.00 5.19
2889 4009 2.576615 GCCATCCAAAGGAGGTACATC 58.423 52.381 0.00 0.00 34.05 3.06
2890 4010 2.092429 GCCATCCAAAGGAGGTACATCA 60.092 50.000 10.08 0.00 34.05 3.07
2945 4069 8.363390 TCATGTTTATTTGCTAAAATGGACACA 58.637 29.630 0.00 0.00 36.04 3.72
2952 4076 5.981088 TGCTAAAATGGACACATGTCAAT 57.019 34.783 13.77 5.22 46.47 2.57
3011 4135 0.834687 TCCTGCCGTTCAACCCTACT 60.835 55.000 0.00 0.00 0.00 2.57
3047 4171 3.544048 CGTTGACATACATTGATGGCGAC 60.544 47.826 10.17 10.17 43.43 5.19
3355 4483 1.466851 AAGCTTGCAAGGCAGGAACC 61.467 55.000 27.10 8.35 40.61 3.62
3363 4491 4.907541 TGCAAGGCAGGAACCTAATGGTA 61.908 47.826 0.00 0.00 39.93 3.25
3414 4543 0.608640 GACGGAAGGAAAGAGAGCCA 59.391 55.000 0.00 0.00 0.00 4.75
3484 4613 2.168621 CACGACAGCGCAGAAACG 59.831 61.111 11.47 13.07 42.48 3.60
3551 4754 2.608752 GGTACACACACTACCGGTTGAG 60.609 54.545 23.12 17.06 0.00 3.02
3552 4755 0.249741 ACACACACTACCGGTTGAGC 60.250 55.000 23.12 0.00 0.00 4.26
3556 4759 1.000955 CACACTACCGGTTGAGCTCTT 59.999 52.381 23.12 0.00 0.00 2.85
3557 4760 2.230508 CACACTACCGGTTGAGCTCTTA 59.769 50.000 23.12 0.00 0.00 2.10
3558 4761 2.230750 ACACTACCGGTTGAGCTCTTAC 59.769 50.000 23.12 12.62 0.00 2.34
3565 4769 4.935808 ACCGGTTGAGCTCTTACTATTTTG 59.064 41.667 16.19 3.19 0.00 2.44
3620 4824 1.814394 TGAGCACCATGTCTTTGATGC 59.186 47.619 0.00 0.00 0.00 3.91
3663 4867 8.565896 AATGAGCACTATGTCTTTGATGTTTA 57.434 30.769 0.00 0.00 0.00 2.01
3665 4869 7.161404 TGAGCACTATGTCTTTGATGTTTACT 58.839 34.615 0.00 0.00 0.00 2.24
3666 4870 8.311109 TGAGCACTATGTCTTTGATGTTTACTA 58.689 33.333 0.00 0.00 0.00 1.82
3669 4873 8.269424 GCACTATGTCTTTGATGTTTACTATCG 58.731 37.037 0.00 0.00 0.00 2.92
3670 4874 9.302345 CACTATGTCTTTGATGTTTACTATCGT 57.698 33.333 0.00 0.00 0.00 3.73
3671 4875 9.871238 ACTATGTCTTTGATGTTTACTATCGTT 57.129 29.630 0.00 0.00 0.00 3.85
3685 5070 8.995906 GTTTACTATCGTTTATTGTGATGTTGC 58.004 33.333 0.00 0.00 0.00 4.17
3699 5084 1.651987 TGTTGCGCCATAAGTAGAGC 58.348 50.000 4.18 0.00 0.00 4.09
3984 5401 8.656849 CAGGTATGTGTTGTAATCAGTTAGAAC 58.343 37.037 2.39 2.39 41.77 3.01
4196 5626 0.175302 AGCGAGGAGTGCTTCTGATG 59.825 55.000 0.00 0.00 40.48 3.07
4199 5629 1.203287 CGAGGAGTGCTTCTGATGTCA 59.797 52.381 0.00 0.00 0.00 3.58
4207 5637 3.549471 GTGCTTCTGATGTCATACTCACG 59.451 47.826 0.00 0.00 0.00 4.35
4229 5659 3.515901 GGAACCTGGTCTAAGTGTGATCT 59.484 47.826 0.00 0.00 0.00 2.75
4246 5676 5.011635 TGTGATCTTTAGTGCTGTCCTTACA 59.988 40.000 0.00 0.00 0.00 2.41
4264 5694 5.278266 CCTTACAAGTCGAGCAATTTTCCAA 60.278 40.000 0.00 0.00 0.00 3.53
4295 5725 9.020731 TGAAGAACTACACTGTATGTCAGATTA 57.979 33.333 6.72 0.00 46.27 1.75
4299 5729 9.419297 GAACTACACTGTATGTCAGATTAAACA 57.581 33.333 6.72 0.00 46.27 2.83
4321 5753 6.974965 ACACAGTGGATGAGATTTTTCTTTC 58.025 36.000 5.31 0.00 0.00 2.62
4323 5755 6.208204 CACAGTGGATGAGATTTTTCTTTCCT 59.792 38.462 0.00 0.00 0.00 3.36
4347 5782 8.345565 CCTCCCATTTATTTGAAGAGTTATTCG 58.654 37.037 0.00 0.00 31.52 3.34
4349 5784 8.673711 TCCCATTTATTTGAAGAGTTATTCGTG 58.326 33.333 0.00 0.00 31.52 4.35
4386 5829 6.819947 ATCATCTAGCCCATATGCTAATCA 57.180 37.500 0.00 0.00 42.93 2.57
4391 5834 2.040813 AGCCCATATGCTAATCACCCAG 59.959 50.000 0.00 0.00 40.56 4.45
4455 5913 7.705325 ACGTATTGTGGTATGTTTGATCTACTC 59.295 37.037 0.00 0.00 0.00 2.59
4460 5918 8.362464 TGTGGTATGTTTGATCTACTCTTACT 57.638 34.615 0.00 0.00 0.00 2.24
4478 5954 6.097356 TCTTACTATGACTACAAGTTTGCCG 58.903 40.000 0.00 0.00 0.00 5.69
4522 5999 9.591792 CTCTGTTTACATAGTTGATGATTCTCA 57.408 33.333 0.00 0.00 39.06 3.27
4528 6005 9.987272 TTACATAGTTGATGATTCTCATAGGTG 57.013 33.333 0.00 0.00 37.20 4.00
4529 6006 8.027524 ACATAGTTGATGATTCTCATAGGTGT 57.972 34.615 0.00 0.00 37.20 4.16
4530 6007 8.489489 ACATAGTTGATGATTCTCATAGGTGTT 58.511 33.333 0.00 0.00 37.20 3.32
4531 6008 9.334947 CATAGTTGATGATTCTCATAGGTGTTT 57.665 33.333 0.00 0.00 37.20 2.83
4532 6009 7.621428 AGTTGATGATTCTCATAGGTGTTTG 57.379 36.000 0.00 0.00 37.20 2.93
4533 6010 6.600822 AGTTGATGATTCTCATAGGTGTTTGG 59.399 38.462 0.00 0.00 37.20 3.28
4534 6011 5.439721 TGATGATTCTCATAGGTGTTTGGG 58.560 41.667 0.00 0.00 37.20 4.12
4535 6012 5.191522 TGATGATTCTCATAGGTGTTTGGGA 59.808 40.000 0.00 0.00 37.20 4.37
4536 6013 5.512942 TGATTCTCATAGGTGTTTGGGAA 57.487 39.130 0.00 0.00 0.00 3.97
4537 6014 6.078456 TGATTCTCATAGGTGTTTGGGAAT 57.922 37.500 0.00 0.00 0.00 3.01
4538 6015 7.206789 TGATTCTCATAGGTGTTTGGGAATA 57.793 36.000 0.00 0.00 0.00 1.75
4539 6016 7.815383 TGATTCTCATAGGTGTTTGGGAATAT 58.185 34.615 0.00 0.00 0.00 1.28
4540 6017 8.281531 TGATTCTCATAGGTGTTTGGGAATATT 58.718 33.333 0.00 0.00 0.00 1.28
4541 6018 9.136323 GATTCTCATAGGTGTTTGGGAATATTT 57.864 33.333 0.00 0.00 0.00 1.40
4542 6019 8.893563 TTCTCATAGGTGTTTGGGAATATTTT 57.106 30.769 0.00 0.00 0.00 1.82
4543 6020 8.292444 TCTCATAGGTGTTTGGGAATATTTTG 57.708 34.615 0.00 0.00 0.00 2.44
4544 6021 6.872920 TCATAGGTGTTTGGGAATATTTTGC 58.127 36.000 0.00 0.00 0.00 3.68
4545 6022 6.438741 TCATAGGTGTTTGGGAATATTTTGCA 59.561 34.615 0.00 0.00 0.00 4.08
4546 6023 5.151297 AGGTGTTTGGGAATATTTTGCAG 57.849 39.130 0.00 0.00 0.00 4.41
4554 6031 5.732633 TGGGAATATTTTGCAGGTCAATTG 58.267 37.500 0.00 0.00 34.12 2.32
4605 6083 8.106247 TCCTGTTAATAAAACTGATGTTCCAC 57.894 34.615 0.00 0.00 34.96 4.02
4655 6133 7.888021 TGTGAAATTATGTCCATGAACCTTACT 59.112 33.333 0.00 0.00 0.00 2.24
4658 6136 9.788960 GAAATTATGTCCATGAACCTTACTTTC 57.211 33.333 0.00 0.00 0.00 2.62
4665 6145 8.792633 TGTCCATGAACCTTACTTTCTTTATTG 58.207 33.333 0.00 0.00 0.00 1.90
4671 6151 8.836413 TGAACCTTACTTTCTTTATTGTGTGAG 58.164 33.333 0.00 0.00 0.00 3.51
4683 6163 6.908870 TTATTGTGTGAGTATGCATCTGAC 57.091 37.500 0.19 5.66 0.00 3.51
4827 6317 1.277580 ATTCCTCCCCTGCCTCACAG 61.278 60.000 0.00 0.00 46.77 3.66
4943 6441 2.235650 AGTAAAACCTTCTCCGCTACCC 59.764 50.000 0.00 0.00 0.00 3.69
5043 6541 1.065926 TCTGGGCTGCATACAAGACTG 60.066 52.381 0.50 0.00 0.00 3.51
5056 6554 2.952310 ACAAGACTGACTTTTTCCCTGC 59.048 45.455 0.00 0.00 36.61 4.85
5077 6580 6.072112 TGCAAGGAGTACTGAAATGAAAAC 57.928 37.500 0.00 0.00 0.00 2.43
5081 6584 7.043391 GCAAGGAGTACTGAAATGAAAACAAAC 60.043 37.037 0.00 0.00 0.00 2.93
5084 6587 9.403583 AGGAGTACTGAAATGAAAACAAACTAA 57.596 29.630 0.00 0.00 0.00 2.24
5210 7288 5.179368 TCATGTAAAAAGCCTTGAGAAGACG 59.821 40.000 0.00 0.00 0.00 4.18
5297 7375 4.092771 TCTCATCTTCGTTACAAGGTCG 57.907 45.455 0.00 0.00 0.00 4.79
5405 7585 1.153469 CGCCCTCCTCTCTTTGCTC 60.153 63.158 0.00 0.00 0.00 4.26
5433 7613 9.290988 ACATGTATGTAAATTTACAAGTCACCA 57.709 29.630 29.44 19.77 45.74 4.17
5434 7614 9.773328 CATGTATGTAAATTTACAAGTCACCAG 57.227 33.333 29.44 17.91 45.74 4.00
5520 7705 2.947652 CTGGGCATTCACTTCGATCAAT 59.052 45.455 0.00 0.00 0.00 2.57
5529 7714 0.870393 CTTCGATCAATGGCATCGGG 59.130 55.000 0.00 0.00 42.83 5.14
5603 7788 4.201666 GCTCGACATCATCAAGTTCTTCAC 60.202 45.833 0.00 0.00 0.00 3.18
5613 7798 0.175073 AGTTCTTCACCCGATACGCC 59.825 55.000 0.00 0.00 0.00 5.68
5616 7801 1.067582 CTTCACCCGATACGCCCTC 59.932 63.158 0.00 0.00 0.00 4.30
5646 7831 3.552875 AGCATGGGATCTTGTCATTGAG 58.447 45.455 0.00 0.00 0.00 3.02
5656 7841 6.541641 GGATCTTGTCATTGAGCAAAGAGTAT 59.458 38.462 10.45 0.00 0.00 2.12
5661 7850 6.902341 TGTCATTGAGCAAAGAGTATTTCAC 58.098 36.000 0.00 0.00 0.00 3.18
5664 7853 7.695618 GTCATTGAGCAAAGAGTATTTCACATC 59.304 37.037 0.00 0.00 0.00 3.06
5683 7872 1.004862 TCGCACCACCATAATTTCCCA 59.995 47.619 0.00 0.00 0.00 4.37
5687 7876 4.622695 CGCACCACCATAATTTCCCATTTT 60.623 41.667 0.00 0.00 0.00 1.82
5688 7877 4.635324 GCACCACCATAATTTCCCATTTTG 59.365 41.667 0.00 0.00 0.00 2.44
5693 7882 7.446931 ACCACCATAATTTCCCATTTTGTTTTC 59.553 33.333 0.00 0.00 0.00 2.29
5700 7889 8.552083 AATTTCCCATTTTGTTTTCAGCTATC 57.448 30.769 0.00 0.00 0.00 2.08
5718 7907 2.145397 TCGAGAGCCCACTACATTCT 57.855 50.000 0.00 0.00 0.00 2.40
5729 7918 4.487948 CCACTACATTCTGTGCATTTTGG 58.512 43.478 0.00 0.00 33.26 3.28
5759 8023 9.270640 TGATGGTTCATTTGTTTTTATCCTTTG 57.729 29.630 0.00 0.00 0.00 2.77
5786 8050 2.946329 TGCGTTTACAAGGAAGAAGCAA 59.054 40.909 0.00 0.00 0.00 3.91
5793 8057 2.037641 ACAAGGAAGAAGCAATTTGGCC 59.962 45.455 0.00 0.00 0.00 5.36
5796 8060 1.673923 GGAAGAAGCAATTTGGCCAGC 60.674 52.381 5.11 5.97 0.00 4.85
5873 8146 1.130054 AGCTGTTCCCTGAGAAGGCA 61.130 55.000 0.00 0.00 37.06 4.75
5874 8147 0.250901 GCTGTTCCCTGAGAAGGCAA 60.251 55.000 0.00 0.00 35.60 4.52
5970 8243 5.069383 TGCAAAGAATTCCATGTATGGGATG 59.931 40.000 10.82 0.00 45.57 3.51
6061 8404 0.549950 CTCAAGGGGCATGTGGAGAT 59.450 55.000 0.00 0.00 0.00 2.75
6073 8416 0.741221 GTGGAGATGGTCGTGAAGCC 60.741 60.000 0.00 0.00 0.00 4.35
6121 8464 3.002791 AGCAATCTTACACCGTGTGATG 58.997 45.455 14.66 3.07 36.96 3.07
6149 8496 4.540099 TGGGATATCTTTGAAAGTGGGAGT 59.460 41.667 4.68 0.00 0.00 3.85
6166 8515 5.940470 GTGGGAGTTTATATATCCTTGCTGG 59.060 44.000 0.00 0.00 33.40 4.85
6230 8583 2.543777 AGTTGACTTAAAGCTGCCGA 57.456 45.000 0.00 0.00 0.00 5.54
6248 8601 3.619929 GCCGACGTTACCAGTTCAATATT 59.380 43.478 0.00 0.00 0.00 1.28
6313 8667 4.020662 GCAAAACCCATATGGACCAAAAGA 60.021 41.667 24.00 0.00 37.39 2.52
6316 8670 2.311542 ACCCATATGGACCAAAAGAGCA 59.688 45.455 24.00 0.00 37.39 4.26
6340 8694 7.906527 GCAAAGACATGAATAAAATTTGGATGC 59.093 33.333 0.00 0.00 0.00 3.91
6426 9067 2.902486 AGAAGATTGTCTCTCCAGTGCA 59.098 45.455 0.00 0.00 31.03 4.57
6466 9107 3.870538 ATGCATTTCTCCAGCCTCATA 57.129 42.857 0.00 0.00 0.00 2.15
6509 9150 4.336889 TGTGTTGGTTTGTTTTTGGTCA 57.663 36.364 0.00 0.00 0.00 4.02
6522 9163 0.801872 TTGGTCATGCGTGTGTATGC 59.198 50.000 5.68 0.00 38.01 3.14
6557 9205 1.484038 AAGAGCTGGGTTTGTTGCAA 58.516 45.000 0.00 0.00 0.00 4.08
6570 9218 1.064758 TGTTGCAACAGAGGGAGTTGT 60.065 47.619 27.96 0.00 46.09 3.32
6575 9223 2.023673 CAACAGAGGGAGTTGTGCAAA 58.976 47.619 0.00 0.00 41.00 3.68
6576 9224 1.972872 ACAGAGGGAGTTGTGCAAAG 58.027 50.000 0.00 0.00 0.00 2.77
6577 9225 0.595095 CAGAGGGAGTTGTGCAAAGC 59.405 55.000 0.00 0.00 0.00 3.51
6578 9226 0.183492 AGAGGGAGTTGTGCAAAGCA 59.817 50.000 0.00 0.00 35.60 3.91
6604 9256 9.386122 ACTGTCCTCCACTATGATTTATTAGAT 57.614 33.333 0.00 0.00 0.00 1.98
6605 9257 9.650539 CTGTCCTCCACTATGATTTATTAGATG 57.349 37.037 0.00 0.00 0.00 2.90
6694 9351 2.180017 GCGAACGAGCCGGAACTA 59.820 61.111 5.05 0.00 0.00 2.24
6708 9365 3.550678 CCGGAACTAGACGCTAATGAAAC 59.449 47.826 0.00 0.00 0.00 2.78
6776 9433 3.325753 ACCTCTGCCCTCCACTGC 61.326 66.667 0.00 0.00 0.00 4.40
6831 9488 9.349713 ACAAAGATTTTACCTCATAGTTTCACA 57.650 29.630 0.00 0.00 0.00 3.58
6832 9489 9.831737 CAAAGATTTTACCTCATAGTTTCACAG 57.168 33.333 0.00 0.00 0.00 3.66
6833 9490 9.574516 AAAGATTTTACCTCATAGTTTCACAGT 57.425 29.630 0.00 0.00 0.00 3.55
6834 9491 9.574516 AAGATTTTACCTCATAGTTTCACAGTT 57.425 29.630 0.00 0.00 0.00 3.16
6838 9495 9.841295 TTTTACCTCATAGTTTCACAGTTAAGT 57.159 29.630 0.00 0.00 0.00 2.24
6839 9496 8.827177 TTACCTCATAGTTTCACAGTTAAGTG 57.173 34.615 8.81 8.81 40.85 3.16
6840 9497 7.062749 ACCTCATAGTTTCACAGTTAAGTGA 57.937 36.000 17.23 5.39 46.12 3.41
6852 9509 8.771920 TCACAGTTAAGTGAGTTTACATATGG 57.228 34.615 17.23 0.00 43.18 2.74
6853 9510 7.822334 TCACAGTTAAGTGAGTTTACATATGGG 59.178 37.037 17.23 0.00 43.18 4.00
6854 9511 7.822334 CACAGTTAAGTGAGTTTACATATGGGA 59.178 37.037 17.23 0.00 42.05 4.37
6855 9512 8.548877 ACAGTTAAGTGAGTTTACATATGGGAT 58.451 33.333 17.23 0.00 0.00 3.85
6858 9515 9.826574 GTTAAGTGAGTTTACATATGGGATACA 57.173 33.333 7.80 0.00 39.74 2.29
6876 9533 9.565090 TGGGATACATAAAAGAATCTTCTCATG 57.435 33.333 0.00 3.30 35.26 3.07
6877 9534 9.566432 GGGATACATAAAAGAATCTTCTCATGT 57.434 33.333 16.11 16.11 35.26 3.21
6887 9544 8.815141 AAGAATCTTCTCATGTCTAATGATCG 57.185 34.615 0.00 0.00 36.28 3.69
6888 9545 6.867816 AGAATCTTCTCATGTCTAATGATCGC 59.132 38.462 0.00 0.00 29.94 4.58
6889 9546 5.520376 TCTTCTCATGTCTAATGATCGCA 57.480 39.130 0.00 0.00 0.00 5.10
6890 9547 5.906073 TCTTCTCATGTCTAATGATCGCAA 58.094 37.500 0.00 0.00 0.00 4.85
6891 9548 5.750547 TCTTCTCATGTCTAATGATCGCAAC 59.249 40.000 0.00 0.00 0.00 4.17
6892 9549 5.268118 TCTCATGTCTAATGATCGCAACT 57.732 39.130 0.00 0.00 0.00 3.16
6893 9550 5.664457 TCTCATGTCTAATGATCGCAACTT 58.336 37.500 0.00 0.00 0.00 2.66
6894 9551 6.805713 TCTCATGTCTAATGATCGCAACTTA 58.194 36.000 0.00 0.00 0.00 2.24
6895 9552 7.264947 TCTCATGTCTAATGATCGCAACTTAA 58.735 34.615 0.00 0.00 0.00 1.85
6896 9553 7.436376 TCTCATGTCTAATGATCGCAACTTAAG 59.564 37.037 0.00 0.00 0.00 1.85
6897 9554 7.041721 TCATGTCTAATGATCGCAACTTAAGT 58.958 34.615 1.12 1.12 0.00 2.24
6898 9555 6.647212 TGTCTAATGATCGCAACTTAAGTG 57.353 37.500 9.34 4.88 0.00 3.16
6899 9556 6.394809 TGTCTAATGATCGCAACTTAAGTGA 58.605 36.000 9.34 2.55 0.00 3.41
6900 9557 6.531594 TGTCTAATGATCGCAACTTAAGTGAG 59.468 38.462 9.34 6.43 0.00 3.51
6901 9558 6.531948 GTCTAATGATCGCAACTTAAGTGAGT 59.468 38.462 9.34 0.00 0.00 3.41
6902 9559 5.786401 AATGATCGCAACTTAAGTGAGTC 57.214 39.130 9.34 4.61 0.00 3.36
6903 9560 4.521130 TGATCGCAACTTAAGTGAGTCT 57.479 40.909 9.34 0.00 0.00 3.24
6904 9561 5.638596 TGATCGCAACTTAAGTGAGTCTA 57.361 39.130 9.34 0.00 0.00 2.59
6905 9562 6.208988 TGATCGCAACTTAAGTGAGTCTAT 57.791 37.500 9.34 0.00 0.00 1.98
6906 9563 7.329588 TGATCGCAACTTAAGTGAGTCTATA 57.670 36.000 9.34 0.00 0.00 1.31
6907 9564 7.418408 TGATCGCAACTTAAGTGAGTCTATAG 58.582 38.462 9.34 0.00 0.00 1.31
6908 9565 6.997239 TCGCAACTTAAGTGAGTCTATAGA 57.003 37.500 9.34 0.00 0.00 1.98
6909 9566 7.017498 TCGCAACTTAAGTGAGTCTATAGAG 57.983 40.000 9.34 0.00 0.00 2.43
6910 9567 5.683743 CGCAACTTAAGTGAGTCTATAGAGC 59.316 44.000 9.34 0.00 0.00 4.09
6911 9568 6.459024 CGCAACTTAAGTGAGTCTATAGAGCT 60.459 42.308 9.34 3.71 0.00 4.09
6912 9569 6.695278 GCAACTTAAGTGAGTCTATAGAGCTG 59.305 42.308 9.34 0.00 0.00 4.24
6913 9570 6.385649 ACTTAAGTGAGTCTATAGAGCTGC 57.614 41.667 7.48 0.00 0.00 5.25
6914 9571 6.126409 ACTTAAGTGAGTCTATAGAGCTGCT 58.874 40.000 7.48 0.00 0.00 4.24
6915 9572 7.284074 ACTTAAGTGAGTCTATAGAGCTGCTA 58.716 38.462 7.48 0.00 0.00 3.49
6916 9573 7.942341 ACTTAAGTGAGTCTATAGAGCTGCTAT 59.058 37.037 7.48 0.70 42.41 2.97
6917 9574 9.443323 CTTAAGTGAGTCTATAGAGCTGCTATA 57.557 37.037 6.45 6.45 40.30 1.31
6918 9575 9.794719 TTAAGTGAGTCTATAGAGCTGCTATAA 57.205 33.333 8.20 0.00 40.59 0.98
6919 9576 8.877864 AAGTGAGTCTATAGAGCTGCTATAAT 57.122 34.615 8.20 2.40 40.59 1.28
6920 9577 8.506168 AGTGAGTCTATAGAGCTGCTATAATC 57.494 38.462 8.20 0.00 40.59 1.75
6921 9578 8.328758 AGTGAGTCTATAGAGCTGCTATAATCT 58.671 37.037 8.20 0.79 40.59 2.40
6922 9579 8.956426 GTGAGTCTATAGAGCTGCTATAATCTT 58.044 37.037 8.20 0.00 40.59 2.40
6923 9580 9.527157 TGAGTCTATAGAGCTGCTATAATCTTT 57.473 33.333 8.20 0.00 40.59 2.52
6925 9582 9.527157 AGTCTATAGAGCTGCTATAATCTTTCA 57.473 33.333 8.20 0.00 40.59 2.69
6931 9588 8.743085 AGAGCTGCTATAATCTTTCATTTTCA 57.257 30.769 0.15 0.00 0.00 2.69
6932 9589 9.182214 AGAGCTGCTATAATCTTTCATTTTCAA 57.818 29.630 0.15 0.00 0.00 2.69
6933 9590 9.793252 GAGCTGCTATAATCTTTCATTTTCAAA 57.207 29.630 0.15 0.00 0.00 2.69
6943 9600 9.631257 AATCTTTCATTTTCAAAAAGGGATGTT 57.369 25.926 0.64 0.00 32.20 2.71
6949 9606 9.927668 TCATTTTCAAAAAGGGATGTTAAGATC 57.072 29.630 4.01 4.01 31.18 2.75
6950 9607 9.709495 CATTTTCAAAAAGGGATGTTAAGATCA 57.291 29.630 14.01 0.00 0.00 2.92
6959 9616 8.888579 AAGGGATGTTAAGATCATTAACTACG 57.111 34.615 14.01 0.00 36.23 3.51
6960 9617 8.246430 AGGGATGTTAAGATCATTAACTACGA 57.754 34.615 14.01 7.86 36.23 3.43
6961 9618 8.361139 AGGGATGTTAAGATCATTAACTACGAG 58.639 37.037 14.01 0.00 36.23 4.18
6962 9619 7.599245 GGGATGTTAAGATCATTAACTACGAGG 59.401 40.741 14.01 0.00 36.23 4.63
6963 9620 7.599245 GGATGTTAAGATCATTAACTACGAGGG 59.401 40.741 14.01 0.00 36.23 4.30
6964 9621 6.278363 TGTTAAGATCATTAACTACGAGGGC 58.722 40.000 19.49 0.00 36.23 5.19
6965 9622 6.127281 TGTTAAGATCATTAACTACGAGGGCA 60.127 38.462 19.49 3.83 36.23 5.36
6966 9623 5.353394 AAGATCATTAACTACGAGGGCAA 57.647 39.130 0.00 0.00 0.00 4.52
6967 9624 4.694339 AGATCATTAACTACGAGGGCAAC 58.306 43.478 0.00 0.00 0.00 4.17
6968 9625 4.406003 AGATCATTAACTACGAGGGCAACT 59.594 41.667 0.00 0.00 0.00 3.16
6969 9626 5.597182 AGATCATTAACTACGAGGGCAACTA 59.403 40.000 0.00 0.00 0.00 2.24
6970 9627 5.002464 TCATTAACTACGAGGGCAACTAC 57.998 43.478 0.00 0.00 0.00 2.73
6971 9628 3.492421 TTAACTACGAGGGCAACTACG 57.508 47.619 0.00 0.00 39.85 3.51
6972 9629 1.251251 AACTACGAGGGCAACTACGT 58.749 50.000 0.00 0.00 45.82 3.57
6973 9630 1.251251 ACTACGAGGGCAACTACGTT 58.749 50.000 0.00 0.00 44.31 3.99
6974 9631 1.200948 ACTACGAGGGCAACTACGTTC 59.799 52.381 0.00 0.00 44.31 3.95
6975 9632 0.168788 TACGAGGGCAACTACGTTCG 59.831 55.000 0.00 0.00 44.31 3.95
6976 9633 1.080974 CGAGGGCAACTACGTTCGT 60.081 57.895 0.00 2.91 0.00 3.85
6977 9634 0.168788 CGAGGGCAACTACGTTCGTA 59.831 55.000 0.00 5.02 0.00 3.43
6978 9635 1.401409 CGAGGGCAACTACGTTCGTAA 60.401 52.381 0.00 0.00 0.00 3.18
6979 9636 2.676076 GAGGGCAACTACGTTCGTAAA 58.324 47.619 0.00 0.00 0.00 2.01
6980 9637 3.059166 GAGGGCAACTACGTTCGTAAAA 58.941 45.455 0.00 0.00 0.00 1.52
6981 9638 3.062042 AGGGCAACTACGTTCGTAAAAG 58.938 45.455 0.00 0.05 0.00 2.27
6982 9639 2.158254 GGGCAACTACGTTCGTAAAAGG 59.842 50.000 0.00 0.00 0.00 3.11
6983 9640 3.059166 GGCAACTACGTTCGTAAAAGGA 58.941 45.455 0.00 0.00 0.00 3.36
6984 9641 3.494251 GGCAACTACGTTCGTAAAAGGAA 59.506 43.478 0.00 0.00 0.00 3.36
6985 9642 4.448891 GCAACTACGTTCGTAAAAGGAAC 58.551 43.478 0.00 3.10 39.02 3.62
6986 9643 4.209911 GCAACTACGTTCGTAAAAGGAACT 59.790 41.667 0.00 2.13 39.91 3.01
6987 9644 5.663292 CAACTACGTTCGTAAAAGGAACTG 58.337 41.667 0.00 6.78 39.91 3.16
6988 9645 4.301628 ACTACGTTCGTAAAAGGAACTGG 58.698 43.478 0.00 3.70 39.91 4.00
6989 9646 3.183793 ACGTTCGTAAAAGGAACTGGT 57.816 42.857 9.88 0.88 39.91 4.00
6990 9647 4.320608 ACGTTCGTAAAAGGAACTGGTA 57.679 40.909 9.88 0.00 39.91 3.25
6991 9648 4.886579 ACGTTCGTAAAAGGAACTGGTAT 58.113 39.130 9.88 0.00 39.91 2.73
6992 9649 4.687483 ACGTTCGTAAAAGGAACTGGTATG 59.313 41.667 9.88 0.00 39.91 2.39
6993 9650 4.925054 CGTTCGTAAAAGGAACTGGTATGA 59.075 41.667 9.88 0.00 39.91 2.15
6994 9651 5.164022 CGTTCGTAAAAGGAACTGGTATGAC 60.164 44.000 9.88 0.00 39.91 3.06
6995 9652 5.733620 TCGTAAAAGGAACTGGTATGACT 57.266 39.130 0.00 0.00 40.86 3.41
6996 9653 5.475719 TCGTAAAAGGAACTGGTATGACTG 58.524 41.667 0.00 0.00 40.86 3.51
6997 9654 4.630069 CGTAAAAGGAACTGGTATGACTGG 59.370 45.833 0.00 0.00 40.86 4.00
6998 9655 4.993705 AAAAGGAACTGGTATGACTGGA 57.006 40.909 0.00 0.00 40.86 3.86
6999 9656 5.520748 AAAAGGAACTGGTATGACTGGAT 57.479 39.130 0.00 0.00 40.86 3.41
7000 9657 6.636454 AAAAGGAACTGGTATGACTGGATA 57.364 37.500 0.00 0.00 40.86 2.59
7001 9658 6.636454 AAAGGAACTGGTATGACTGGATAA 57.364 37.500 0.00 0.00 40.86 1.75
7002 9659 6.831664 AAGGAACTGGTATGACTGGATAAT 57.168 37.500 0.00 0.00 40.86 1.28
7003 9660 6.831664 AGGAACTGGTATGACTGGATAATT 57.168 37.500 0.00 0.00 37.18 1.40
7004 9661 7.931015 AGGAACTGGTATGACTGGATAATTA 57.069 36.000 0.00 0.00 37.18 1.40
7005 9662 7.736893 AGGAACTGGTATGACTGGATAATTAC 58.263 38.462 0.00 0.00 37.18 1.89
7006 9663 7.569111 AGGAACTGGTATGACTGGATAATTACT 59.431 37.037 0.00 0.00 37.18 2.24
7007 9664 8.867097 GGAACTGGTATGACTGGATAATTACTA 58.133 37.037 0.00 0.00 0.00 1.82
7008 9665 9.915629 GAACTGGTATGACTGGATAATTACTAG 57.084 37.037 0.00 0.00 0.00 2.57
7009 9666 7.897864 ACTGGTATGACTGGATAATTACTAGC 58.102 38.462 0.00 0.00 0.00 3.42
7010 9667 7.509318 ACTGGTATGACTGGATAATTACTAGCA 59.491 37.037 0.00 0.00 0.00 3.49
7011 9668 8.435931 TGGTATGACTGGATAATTACTAGCAT 57.564 34.615 0.00 0.00 0.00 3.79
7012 9669 8.531982 TGGTATGACTGGATAATTACTAGCATC 58.468 37.037 0.00 0.00 0.00 3.91
7013 9670 7.702772 GGTATGACTGGATAATTACTAGCATCG 59.297 40.741 0.00 0.00 0.00 3.84
7014 9671 6.894339 TGACTGGATAATTACTAGCATCGA 57.106 37.500 0.00 0.00 0.00 3.59
7015 9672 6.678878 TGACTGGATAATTACTAGCATCGAC 58.321 40.000 0.00 0.00 0.00 4.20
7016 9673 6.264518 TGACTGGATAATTACTAGCATCGACA 59.735 38.462 0.00 0.00 0.00 4.35
7017 9674 7.050970 ACTGGATAATTACTAGCATCGACAA 57.949 36.000 0.00 0.00 0.00 3.18
7018 9675 6.924060 ACTGGATAATTACTAGCATCGACAAC 59.076 38.462 0.00 0.00 0.00 3.32
7019 9676 6.811954 TGGATAATTACTAGCATCGACAACA 58.188 36.000 0.00 0.00 0.00 3.33
7020 9677 7.441836 TGGATAATTACTAGCATCGACAACAT 58.558 34.615 0.00 0.00 0.00 2.71
7021 9678 7.598869 TGGATAATTACTAGCATCGACAACATC 59.401 37.037 0.00 0.00 0.00 3.06
7022 9679 7.598869 GGATAATTACTAGCATCGACAACATCA 59.401 37.037 0.00 0.00 0.00 3.07
7023 9680 9.144747 GATAATTACTAGCATCGACAACATCAT 57.855 33.333 0.00 0.00 0.00 2.45
7024 9681 7.792374 AATTACTAGCATCGACAACATCATT 57.208 32.000 0.00 0.00 0.00 2.57
7025 9682 8.887036 AATTACTAGCATCGACAACATCATTA 57.113 30.769 0.00 0.00 0.00 1.90
7026 9683 8.887036 ATTACTAGCATCGACAACATCATTAA 57.113 30.769 0.00 0.00 0.00 1.40
7027 9684 8.887036 TTACTAGCATCGACAACATCATTAAT 57.113 30.769 0.00 0.00 0.00 1.40
7028 9685 7.182361 ACTAGCATCGACAACATCATTAATG 57.818 36.000 9.29 9.29 41.48 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 2.439156 ATTCCGCTCCTGCTTGCC 60.439 61.111 0.00 0.00 36.97 4.52
20 21 2.496817 GTCGATTCCGCTCCTGCT 59.503 61.111 0.00 0.00 36.97 4.24
21 22 2.956964 CGTCGATTCCGCTCCTGC 60.957 66.667 0.00 0.00 35.37 4.85
29 30 2.278661 GAGGACGGCGTCGATTCC 60.279 66.667 31.02 19.25 40.11 3.01
31 32 1.153823 CTTGAGGACGGCGTCGATT 60.154 57.895 31.02 20.05 40.11 3.34
32 33 1.592400 TTCTTGAGGACGGCGTCGAT 61.592 55.000 31.02 23.00 40.11 3.59
33 34 2.196382 CTTCTTGAGGACGGCGTCGA 62.196 60.000 31.02 20.24 40.11 4.20
34 35 1.801913 CTTCTTGAGGACGGCGTCG 60.802 63.158 31.02 18.30 43.02 5.12
35 36 4.170723 CTTCTTGAGGACGGCGTC 57.829 61.111 30.72 30.72 0.00 5.19
50 56 1.120530 ATTACCAGATCGACGGCCTT 58.879 50.000 0.00 0.00 0.00 4.35
70 76 6.270156 ACGAAAAACCAAAAGAACCAACTA 57.730 33.333 0.00 0.00 0.00 2.24
74 80 5.103687 GCTAACGAAAAACCAAAAGAACCA 58.896 37.500 0.00 0.00 0.00 3.67
82 88 3.377798 ACCGAAAGCTAACGAAAAACCAA 59.622 39.130 12.85 0.00 0.00 3.67
102 108 1.080434 GCAGAGACGAGACCACACC 60.080 63.158 0.00 0.00 0.00 4.16
125 131 1.160137 GCTAATCCATCCACATCGGC 58.840 55.000 0.00 0.00 33.14 5.54
136 142 0.472471 GGATTCCCCGTGCTAATCCA 59.528 55.000 8.15 0.00 45.31 3.41
150 159 2.344950 CCGCTGCTAGATCATGGATTC 58.655 52.381 0.00 0.00 0.00 2.52
339 348 3.717400 TTTGCGGTGAAATGTTGCTAA 57.283 38.095 0.00 0.00 0.00 3.09
517 531 3.261897 CCAGAAGAGGAAGAACCAAGCTA 59.738 47.826 0.00 0.00 42.04 3.32
518 532 2.039613 CCAGAAGAGGAAGAACCAAGCT 59.960 50.000 0.00 0.00 42.04 3.74
536 550 2.766828 CCTACTACTCCAAGGAACCCAG 59.233 54.545 0.00 0.00 31.64 4.45
599 613 7.174599 TGGCTGTGGGATTTTAAAATTGAAATG 59.825 33.333 14.45 6.29 0.00 2.32
600 614 7.174772 GTGGCTGTGGGATTTTAAAATTGAAAT 59.825 33.333 14.45 0.00 0.00 2.17
636 650 5.390387 AGCCATAAAACTGTGAGGGTTTTA 58.610 37.500 12.13 12.13 46.24 1.52
656 670 4.808895 AGGTCGAAAACAAAAATCAAAGCC 59.191 37.500 0.00 0.00 0.00 4.35
666 680 2.608546 CGGTACACAGGTCGAAAACAAA 59.391 45.455 0.00 0.00 0.00 2.83
675 689 3.001406 AGCCCCGGTACACAGGTC 61.001 66.667 0.00 0.00 0.00 3.85
676 690 3.319198 CAGCCCCGGTACACAGGT 61.319 66.667 0.00 0.00 0.00 4.00
677 691 4.778143 GCAGCCCCGGTACACAGG 62.778 72.222 0.00 0.00 0.00 4.00
680 694 4.778143 CAGGCAGCCCCGGTACAC 62.778 72.222 8.22 0.00 39.21 2.90
681 695 3.908904 TACAGGCAGCCCCGGTACA 62.909 63.158 8.22 0.00 42.35 2.90
683 697 2.599139 ATCTACAGGCAGCCCCGGTA 62.599 60.000 8.22 7.91 42.35 4.02
684 698 4.715130 TCTACAGGCAGCCCCGGT 62.715 66.667 8.22 7.05 44.59 5.28
685 699 3.164269 ATCTACAGGCAGCCCCGG 61.164 66.667 8.22 0.00 39.21 5.73
686 700 2.109799 CATCTACAGGCAGCCCCG 59.890 66.667 8.22 1.62 39.21 5.73
687 701 2.203266 GCATCTACAGGCAGCCCC 60.203 66.667 8.22 0.00 0.00 5.80
690 704 2.245159 TACATGCATCTACAGGCAGC 57.755 50.000 0.00 0.00 44.24 5.25
692 706 4.383173 CAGAATACATGCATCTACAGGCA 58.617 43.478 0.00 0.00 45.23 4.75
700 716 3.633525 TCCAAAGCCAGAATACATGCATC 59.366 43.478 0.00 0.00 0.00 3.91
730 751 7.145985 GTGAACTTTGATCGACCTGCTATATA 58.854 38.462 0.00 0.00 0.00 0.86
731 752 5.986135 GTGAACTTTGATCGACCTGCTATAT 59.014 40.000 0.00 0.00 0.00 0.86
732 753 5.105513 TGTGAACTTTGATCGACCTGCTATA 60.106 40.000 0.00 0.00 0.00 1.31
733 754 4.184629 GTGAACTTTGATCGACCTGCTAT 58.815 43.478 0.00 0.00 0.00 2.97
734 755 3.006430 TGTGAACTTTGATCGACCTGCTA 59.994 43.478 0.00 0.00 0.00 3.49
735 756 2.224281 TGTGAACTTTGATCGACCTGCT 60.224 45.455 0.00 0.00 0.00 4.24
755 776 6.199154 CAGTATTTCGAGCAACCACTATACTG 59.801 42.308 0.00 0.00 38.33 2.74
760 781 4.794278 TCAGTATTTCGAGCAACCACTA 57.206 40.909 0.00 0.00 0.00 2.74
761 782 3.678056 TCAGTATTTCGAGCAACCACT 57.322 42.857 0.00 0.00 0.00 4.00
764 785 4.946784 AACATCAGTATTTCGAGCAACC 57.053 40.909 0.00 0.00 0.00 3.77
801 822 4.695928 GCCAGGTCACCTTTAGTTAGAAAG 59.304 45.833 0.00 0.00 36.38 2.62
922 1541 0.103937 GCTGCAGCCTACTACTCCAG 59.896 60.000 28.76 0.00 34.31 3.86
988 1612 1.359848 ACGACCATCGCTTTTAGCAG 58.640 50.000 0.00 0.00 45.12 4.24
1002 1626 4.023536 TGCTCCTGAAATTTTGTAACGACC 60.024 41.667 0.00 0.00 0.00 4.79
1008 1632 4.462483 GGGATGTGCTCCTGAAATTTTGTA 59.538 41.667 0.00 0.00 44.28 2.41
1053 1677 1.071987 CCTGTGGCTGCACTGAAGA 59.928 57.895 0.50 0.00 0.00 2.87
1210 1951 1.303561 TCCTGCAGCCATCAACACC 60.304 57.895 8.66 0.00 0.00 4.16
1336 2191 5.276270 CACAAATTCTGCCATACTATGTGC 58.724 41.667 0.00 0.19 30.66 4.57
1384 2339 4.020307 AGGACATACACATCACACATCACA 60.020 41.667 0.00 0.00 0.00 3.58
1395 2379 1.289160 ACAGGGCAGGACATACACAT 58.711 50.000 0.00 0.00 0.00 3.21
1396 2380 1.003118 GAACAGGGCAGGACATACACA 59.997 52.381 0.00 0.00 0.00 3.72
1437 2421 4.067896 GGTGACAGAACACATCTCACATT 58.932 43.478 0.00 0.00 41.88 2.71
1440 2424 3.111853 TGGTGACAGAACACATCTCAC 57.888 47.619 0.00 0.00 41.88 3.51
1489 2473 3.320541 AGAAGCAGGAAGATGATACCGAG 59.679 47.826 0.00 0.00 0.00 4.63
1501 2485 5.109903 GCTCGAGTTTATAAGAAGCAGGAA 58.890 41.667 15.13 0.00 0.00 3.36
1509 2493 6.472486 CGAAACTGATGCTCGAGTTTATAAGA 59.528 38.462 15.13 0.00 41.43 2.10
1523 2507 1.710013 TTCCTCGACGAAACTGATGC 58.290 50.000 0.00 0.00 0.00 3.91
1534 2518 2.151202 TCCAGCATTGTTTTCCTCGAC 58.849 47.619 0.00 0.00 0.00 4.20
1640 2625 2.154462 ACAGGTACATGCAGAAACAGC 58.846 47.619 7.57 0.00 0.00 4.40
1657 2642 1.140852 TGGACTCCAACAAGGTGACAG 59.859 52.381 0.00 0.00 39.02 3.51
1828 2813 5.414789 TCAATCTTCAAAGGATCACCGTA 57.585 39.130 0.00 0.00 41.83 4.02
1833 2818 4.885907 GCCTGATCAATCTTCAAAGGATCA 59.114 41.667 0.00 0.00 41.31 2.92
1856 2841 4.720649 TTTGATAAGAGGACAGGACGAG 57.279 45.455 0.00 0.00 0.00 4.18
2073 3183 1.165270 GTTGCTATGACAACGGCCTT 58.835 50.000 0.00 0.00 40.45 4.35
2125 3235 0.313043 GTTGGTGGAGTCGACGAGAA 59.687 55.000 10.46 0.00 0.00 2.87
2221 3334 4.627035 TGAACAAGTCAATGTAGCGATGAG 59.373 41.667 0.00 0.00 31.51 2.90
2238 3351 5.123186 GTGTCAACCGGATGATAATGAACAA 59.877 40.000 18.19 0.00 0.00 2.83
2255 3368 2.032924 GGCTGTTAACACCTGTGTCAAC 59.967 50.000 3.59 9.10 44.13 3.18
2261 3374 1.610624 CCGATGGCTGTTAACACCTGT 60.611 52.381 20.63 13.16 0.00 4.00
2304 3417 1.938577 CTCGATGCAGATTCCCACAAG 59.061 52.381 0.00 0.00 0.00 3.16
2305 3418 1.554617 TCTCGATGCAGATTCCCACAA 59.445 47.619 0.00 0.00 0.00 3.33
2317 3430 6.815641 AGGATACATGACAATAATCTCGATGC 59.184 38.462 0.00 0.00 41.41 3.91
2402 3515 1.003118 GTGGGCATCGCTATGGGAATA 59.997 52.381 0.00 0.00 33.38 1.75
2495 3608 8.319057 TCAGGTCTGGTCACAATATAGTTAAT 57.681 34.615 0.00 0.00 0.00 1.40
2501 3618 6.440647 AGAAGTTCAGGTCTGGTCACAATATA 59.559 38.462 5.50 0.00 0.00 0.86
2720 3839 1.535028 TGCTTTGAGGTTACATGCGTG 59.465 47.619 3.82 3.82 0.00 5.34
2721 3840 1.535462 GTGCTTTGAGGTTACATGCGT 59.465 47.619 0.00 0.00 0.00 5.24
2722 3841 1.806542 AGTGCTTTGAGGTTACATGCG 59.193 47.619 0.00 0.00 0.00 4.73
2723 3842 3.923017 AAGTGCTTTGAGGTTACATGC 57.077 42.857 0.00 0.00 0.00 4.06
2754 3874 4.161377 TCCTTTTTCAAAAACCTGGACCAG 59.839 41.667 15.15 15.15 0.00 4.00
2784 3904 2.240667 CCATCAGAATCACCTGGTCCTT 59.759 50.000 0.00 0.00 34.99 3.36
2871 3991 6.153340 ACAAATTGATGTACCTCCTTTGGATG 59.847 38.462 18.60 0.00 0.00 3.51
2879 3999 7.548196 TTATTCGACAAATTGATGTACCTCC 57.452 36.000 0.00 0.00 32.57 4.30
2889 4009 9.425893 GTGTATGTCTCATTATTCGACAAATTG 57.574 33.333 0.00 0.00 40.61 2.32
2890 4010 8.612619 GGTGTATGTCTCATTATTCGACAAATT 58.387 33.333 0.00 0.00 40.61 1.82
2945 4069 2.620115 CGCCTATGGAAAGCATTGACAT 59.380 45.455 0.00 0.00 0.00 3.06
2952 4076 2.106074 CACGCGCCTATGGAAAGCA 61.106 57.895 5.73 0.00 0.00 3.91
3011 4135 1.062880 GTCAACGCGGTTCTTTTGTCA 59.937 47.619 12.47 0.00 0.00 3.58
3261 4388 0.031721 AAGTGACCGAAGTCCACGTC 59.968 55.000 0.00 0.00 42.81 4.34
3332 4460 0.606604 CCTGCCTTGCAAGCTTGAAT 59.393 50.000 30.39 0.00 38.41 2.57
3355 4483 5.529060 GGCAGAAAAGGATGACTACCATTAG 59.471 44.000 0.00 0.00 35.17 1.73
3363 4491 3.515602 ACAAGGCAGAAAAGGATGACT 57.484 42.857 0.00 0.00 35.89 3.41
3484 4613 4.321974 CCAAGGTTAAGTGCCCTTTGAATC 60.322 45.833 0.00 0.00 39.04 2.52
3537 4666 1.339097 AAGAGCTCAACCGGTAGTGT 58.661 50.000 17.77 0.00 0.00 3.55
3595 4799 4.005650 TCAAAGACATGGTGCTCATCTTC 58.994 43.478 0.00 0.00 32.92 2.87
3596 4800 4.025040 TCAAAGACATGGTGCTCATCTT 57.975 40.909 0.00 0.00 32.92 2.40
3597 4801 3.708403 TCAAAGACATGGTGCTCATCT 57.292 42.857 0.00 0.00 32.92 2.90
3638 4842 7.458409 AAACATCAAAGACATAGTGCTCATT 57.542 32.000 0.00 0.00 0.00 2.57
3639 4843 7.826252 AGTAAACATCAAAGACATAGTGCTCAT 59.174 33.333 0.00 0.00 0.00 2.90
3640 4844 7.161404 AGTAAACATCAAAGACATAGTGCTCA 58.839 34.615 0.00 0.00 0.00 4.26
3665 4869 4.495019 GGCGCAACATCACAATAAACGATA 60.495 41.667 10.83 0.00 0.00 2.92
3666 4870 3.425404 GCGCAACATCACAATAAACGAT 58.575 40.909 0.30 0.00 0.00 3.73
3669 4873 2.940147 TGGCGCAACATCACAATAAAC 58.060 42.857 10.83 0.00 0.00 2.01
3670 4874 3.865011 ATGGCGCAACATCACAATAAA 57.135 38.095 10.83 0.00 0.00 1.40
3671 4875 4.397730 ACTTATGGCGCAACATCACAATAA 59.602 37.500 10.83 0.00 32.39 1.40
3672 4876 3.944650 ACTTATGGCGCAACATCACAATA 59.055 39.130 10.83 0.00 32.39 1.90
3673 4877 2.754552 ACTTATGGCGCAACATCACAAT 59.245 40.909 10.83 0.00 32.39 2.71
3674 4878 2.158559 ACTTATGGCGCAACATCACAA 58.841 42.857 10.83 0.00 32.39 3.33
3675 4879 1.819928 ACTTATGGCGCAACATCACA 58.180 45.000 10.83 0.00 32.39 3.58
3676 4880 3.194861 TCTACTTATGGCGCAACATCAC 58.805 45.455 10.83 0.00 32.39 3.06
3677 4881 3.457234 CTCTACTTATGGCGCAACATCA 58.543 45.455 10.83 0.00 32.39 3.07
3679 4883 2.158900 AGCTCTACTTATGGCGCAACAT 60.159 45.455 10.83 7.10 34.90 2.71
3680 4884 1.207089 AGCTCTACTTATGGCGCAACA 59.793 47.619 10.83 0.00 0.00 3.33
3685 5070 2.159099 TGTTCCAGCTCTACTTATGGCG 60.159 50.000 0.00 0.00 32.63 5.69
3996 5413 9.503427 CCGTTATATTCCTTTTTCAGTCATTTC 57.497 33.333 0.00 0.00 0.00 2.17
3999 5416 9.675464 TTACCGTTATATTCCTTTTTCAGTCAT 57.325 29.630 0.00 0.00 0.00 3.06
4000 5417 8.938906 GTTACCGTTATATTCCTTTTTCAGTCA 58.061 33.333 0.00 0.00 0.00 3.41
4001 5418 8.938906 TGTTACCGTTATATTCCTTTTTCAGTC 58.061 33.333 0.00 0.00 0.00 3.51
4010 5427 9.457436 AAGAACAAATGTTACCGTTATATTCCT 57.543 29.630 0.00 0.00 38.56 3.36
4020 5450 4.854399 TGAGCAAAGAACAAATGTTACCG 58.146 39.130 0.00 0.00 38.56 4.02
4168 5598 0.390866 CACTCCTCGCTGCATCTGTT 60.391 55.000 0.00 0.00 0.00 3.16
4196 5626 1.549170 ACCAGGTTCCGTGAGTATGAC 59.451 52.381 0.00 0.00 0.00 3.06
4199 5629 2.233305 AGACCAGGTTCCGTGAGTAT 57.767 50.000 0.00 0.00 0.00 2.12
4207 5637 3.515901 AGATCACACTTAGACCAGGTTCC 59.484 47.826 0.00 0.00 0.00 3.62
4229 5659 4.038282 TCGACTTGTAAGGACAGCACTAAA 59.962 41.667 0.00 0.00 36.76 1.85
4246 5676 2.031157 CCGTTGGAAAATTGCTCGACTT 60.031 45.455 0.00 0.00 0.00 3.01
4264 5694 5.185249 ACATACAGTGTAGTTCTTCATCCGT 59.815 40.000 9.25 0.00 39.91 4.69
4295 5725 6.966534 AGAAAAATCTCATCCACTGTGTTT 57.033 33.333 7.08 0.00 0.00 2.83
4299 5729 6.310149 AGGAAAGAAAAATCTCATCCACTGT 58.690 36.000 11.11 0.00 31.72 3.55
4321 5753 8.345565 CGAATAACTCTTCAAATAAATGGGAGG 58.654 37.037 0.00 0.00 0.00 4.30
4323 5755 8.673711 CACGAATAACTCTTCAAATAAATGGGA 58.326 33.333 0.00 0.00 0.00 4.37
4363 5798 6.409005 GGTGATTAGCATATGGGCTAGATGAT 60.409 42.308 9.82 5.50 46.25 2.45
4368 5803 3.264193 TGGGTGATTAGCATATGGGCTAG 59.736 47.826 4.56 0.00 46.25 3.42
4386 5829 3.159213 TCTGCAAACATGAATCTGGGT 57.841 42.857 0.00 0.00 0.00 4.51
4391 5834 5.145059 CGCATAGATCTGCAAACATGAATC 58.855 41.667 5.18 0.00 42.40 2.52
4455 5913 6.097356 TCGGCAAACTTGTAGTCATAGTAAG 58.903 40.000 0.00 0.00 0.00 2.34
4460 5918 4.688879 CACTTCGGCAAACTTGTAGTCATA 59.311 41.667 0.00 0.00 0.00 2.15
4463 5921 2.349532 GCACTTCGGCAAACTTGTAGTC 60.350 50.000 0.00 0.00 0.00 2.59
4522 5999 6.127083 CCTGCAAAATATTCCCAAACACCTAT 60.127 38.462 0.00 0.00 0.00 2.57
4528 6005 5.146010 TGACCTGCAAAATATTCCCAAAC 57.854 39.130 0.00 0.00 0.00 2.93
4529 6006 5.815233 TTGACCTGCAAAATATTCCCAAA 57.185 34.783 0.00 0.00 32.46 3.28
4530 6007 6.171921 CAATTGACCTGCAAAATATTCCCAA 58.828 36.000 0.00 0.00 40.48 4.12
4531 6008 5.248020 ACAATTGACCTGCAAAATATTCCCA 59.752 36.000 13.59 0.00 40.48 4.37
4532 6009 5.733676 ACAATTGACCTGCAAAATATTCCC 58.266 37.500 13.59 0.00 40.48 3.97
4533 6010 8.034804 AGTTACAATTGACCTGCAAAATATTCC 58.965 33.333 13.59 0.00 40.48 3.01
4534 6011 8.986477 AGTTACAATTGACCTGCAAAATATTC 57.014 30.769 13.59 0.00 40.48 1.75
4538 6015 8.584157 TGAATAGTTACAATTGACCTGCAAAAT 58.416 29.630 13.59 0.00 40.48 1.82
4539 6016 7.946207 TGAATAGTTACAATTGACCTGCAAAA 58.054 30.769 13.59 0.00 40.48 2.44
4540 6017 7.517614 TGAATAGTTACAATTGACCTGCAAA 57.482 32.000 13.59 0.00 40.48 3.68
4541 6018 7.701539 ATGAATAGTTACAATTGACCTGCAA 57.298 32.000 13.59 0.00 41.53 4.08
4542 6019 7.701539 AATGAATAGTTACAATTGACCTGCA 57.298 32.000 13.59 5.63 0.00 4.41
4578 6055 9.308000 TGGAACATCAGTTTTATTAACAGGATT 57.692 29.630 0.00 0.00 38.30 3.01
4579 6056 8.739972 GTGGAACATCAGTTTTATTAACAGGAT 58.260 33.333 0.00 0.00 44.52 3.24
4655 6133 8.453320 CAGATGCATACTCACACAATAAAGAAA 58.547 33.333 0.00 0.00 0.00 2.52
4658 6136 7.279536 AGTCAGATGCATACTCACACAATAAAG 59.720 37.037 0.00 0.00 0.00 1.85
4665 6145 3.131933 AGGAGTCAGATGCATACTCACAC 59.868 47.826 23.17 10.85 41.15 3.82
4671 6151 5.293560 GGTAAAGAGGAGTCAGATGCATAC 58.706 45.833 0.00 0.00 0.00 2.39
4683 6163 1.340114 GCTGTTGGGGGTAAAGAGGAG 60.340 57.143 0.00 0.00 0.00 3.69
4856 6346 5.757850 AATGGTTGAGAGTGAAAACTGTC 57.242 39.130 0.00 0.00 0.00 3.51
4858 6348 6.254157 CACAAAATGGTTGAGAGTGAAAACTG 59.746 38.462 0.00 0.00 0.00 3.16
4943 6441 0.588252 CAACCAACTTCCAGCTGTCG 59.412 55.000 13.81 2.73 0.00 4.35
4960 6458 4.383552 CCACCCCAGTTGTGAAAATTTCAA 60.384 41.667 10.27 0.00 42.15 2.69
5043 6541 2.587522 ACTCCTTGCAGGGAAAAAGTC 58.412 47.619 19.32 0.00 35.59 3.01
5056 6554 8.190784 AGTTTGTTTTCATTTCAGTACTCCTTG 58.809 33.333 0.00 0.00 0.00 3.61
5158 6662 8.873144 AGATCCTCTGAAAATTCCATTGAAAAA 58.127 29.630 0.00 0.00 33.32 1.94
5159 6663 8.426569 AGATCCTCTGAAAATTCCATTGAAAA 57.573 30.769 0.00 0.00 33.32 2.29
5161 6665 8.426569 AAAGATCCTCTGAAAATTCCATTGAA 57.573 30.769 0.00 0.00 34.33 2.69
5163 6667 7.833786 TGAAAGATCCTCTGAAAATTCCATTG 58.166 34.615 0.00 0.00 0.00 2.82
5165 6669 7.618512 ACATGAAAGATCCTCTGAAAATTCCAT 59.381 33.333 0.00 0.00 0.00 3.41
5166 6670 6.950041 ACATGAAAGATCCTCTGAAAATTCCA 59.050 34.615 0.00 0.00 0.00 3.53
5210 7288 3.428589 GCATTTGGAAGTCATCTTGAGCC 60.429 47.826 0.00 0.00 33.64 4.70
5297 7375 2.717809 GACGAACGACCAGCTTCGC 61.718 63.158 7.71 0.00 42.45 4.70
5325 7403 1.694696 AGCGAAGACCAGGAGAAAGTT 59.305 47.619 0.00 0.00 0.00 2.66
5326 7404 1.343069 AGCGAAGACCAGGAGAAAGT 58.657 50.000 0.00 0.00 0.00 2.66
5431 7611 1.334869 GTGGTGAAACTTGCTCACTGG 59.665 52.381 3.40 0.00 42.38 4.00
5432 7612 1.334869 GGTGGTGAAACTTGCTCACTG 59.665 52.381 3.40 0.00 42.38 3.66
5433 7613 1.680338 GGTGGTGAAACTTGCTCACT 58.320 50.000 3.40 0.00 42.38 3.41
5434 7614 0.668535 GGGTGGTGAAACTTGCTCAC 59.331 55.000 0.00 0.00 42.08 3.51
5475 7660 1.781429 GCGTATACAGCGATCAGTGTG 59.219 52.381 3.32 0.00 0.00 3.82
5549 7734 0.108756 GACGAGGTTGTAGAGCCACC 60.109 60.000 0.00 0.00 0.00 4.61
5613 7798 3.515286 CATGCTTGCCCGCTGAGG 61.515 66.667 0.00 0.00 40.63 3.86
5623 7808 3.697542 TCAATGACAAGATCCCATGCTTG 59.302 43.478 8.68 8.68 45.27 4.01
5646 7831 4.091424 GTGCGATGTGAAATACTCTTTGC 58.909 43.478 0.00 0.00 0.00 3.68
5656 7841 2.481289 TATGGTGGTGCGATGTGAAA 57.519 45.000 0.00 0.00 0.00 2.69
5661 7850 2.034558 GGGAAATTATGGTGGTGCGATG 59.965 50.000 0.00 0.00 0.00 3.84
5664 7853 1.468985 TGGGAAATTATGGTGGTGCG 58.531 50.000 0.00 0.00 0.00 5.34
5683 7872 5.163713 GGCTCTCGATAGCTGAAAACAAAAT 60.164 40.000 20.57 0.00 42.37 1.82
5687 7876 2.418746 GGGCTCTCGATAGCTGAAAACA 60.419 50.000 20.57 0.00 42.37 2.83
5688 7877 2.205911 GGGCTCTCGATAGCTGAAAAC 58.794 52.381 20.57 4.63 42.37 2.43
5693 7882 1.268352 GTAGTGGGCTCTCGATAGCTG 59.732 57.143 20.57 0.00 42.37 4.24
5700 7889 2.215907 CAGAATGTAGTGGGCTCTCG 57.784 55.000 0.00 0.00 0.00 4.04
5718 7907 2.964464 ACCATCAGTTCCAAAATGCACA 59.036 40.909 0.00 0.00 0.00 4.57
5748 7937 8.784994 TGTAAACGCAATCTACAAAGGATAAAA 58.215 29.630 0.00 0.00 0.00 1.52
5749 7938 8.325421 TGTAAACGCAATCTACAAAGGATAAA 57.675 30.769 0.00 0.00 0.00 1.40
5754 8018 5.180492 TCCTTGTAAACGCAATCTACAAAGG 59.820 40.000 0.00 0.00 35.66 3.11
5759 8023 6.476243 TTCTTCCTTGTAAACGCAATCTAC 57.524 37.500 0.00 0.00 0.00 2.59
5765 8029 2.566913 TGCTTCTTCCTTGTAAACGCA 58.433 42.857 0.00 0.00 0.00 5.24
5786 8050 0.324091 CCCTCTCTTGCTGGCCAAAT 60.324 55.000 7.01 0.00 31.94 2.32
5793 8057 0.612229 TTGAGCTCCCTCTCTTGCTG 59.388 55.000 12.15 0.00 38.93 4.41
5796 8060 1.065636 TGCATTGAGCTCCCTCTCTTG 60.066 52.381 12.15 0.00 45.94 3.02
5818 8091 2.187946 GCCCATGGAGTGTCCTCG 59.812 66.667 15.22 0.00 38.70 4.63
5844 8117 2.486966 GAACAGCTTGGCATCCGC 59.513 61.111 0.00 0.00 37.44 5.54
5924 8197 4.771114 AGTGGCTACATACCTTGCAATA 57.229 40.909 0.00 0.00 0.00 1.90
5970 8243 9.245962 CAAGAAATATGAAAGATCATGGAAAGC 57.754 33.333 0.00 0.00 45.82 3.51
6030 8355 1.909302 CCCCTTGAGAGTGTGTACCAT 59.091 52.381 0.00 0.00 0.00 3.55
6061 8404 2.342279 CCTTCGGCTTCACGACCA 59.658 61.111 0.00 0.00 43.37 4.02
6073 8416 2.278857 CGATGTCGAGGCCCTTCG 60.279 66.667 8.05 8.05 43.02 3.79
6121 8464 6.127619 CCCACTTTCAAAGATATCCCAAACTC 60.128 42.308 3.49 0.00 0.00 3.01
6211 8564 2.143925 GTCGGCAGCTTTAAGTCAACT 58.856 47.619 0.00 0.00 0.00 3.16
6230 8583 6.150474 CCCTTCAAATATTGAACTGGTAACGT 59.850 38.462 1.57 0.00 44.21 3.99
6248 8601 6.381498 TGATAGTACATCAAACCCCTTCAA 57.619 37.500 0.00 0.00 0.00 2.69
6313 8667 9.158233 CATCCAAATTTTATTCATGTCTTTGCT 57.842 29.630 0.00 0.00 0.00 3.91
6316 8670 9.729281 AAGCATCCAAATTTTATTCATGTCTTT 57.271 25.926 0.00 0.00 0.00 2.52
6340 8694 3.617263 GGTACCATGTTTCAGTAGCGAAG 59.383 47.826 7.15 0.00 0.00 3.79
6412 9053 1.879372 GCACAATGCACTGGAGAGACA 60.879 52.381 0.00 0.00 44.26 3.41
6525 9173 0.034616 AGCTCTTTTCTGCAGCGACT 59.965 50.000 9.47 0.00 38.26 4.18
6528 9176 1.500844 CCAGCTCTTTTCTGCAGCG 59.499 57.895 9.47 0.00 38.26 5.18
6537 9185 1.484038 TGCAACAAACCCAGCTCTTT 58.516 45.000 0.00 0.00 0.00 2.52
6557 9205 1.972872 CTTTGCACAACTCCCTCTGT 58.027 50.000 0.00 0.00 0.00 3.41
6570 9218 0.819259 GTGGAGGACAGTGCTTTGCA 60.819 55.000 0.00 0.00 35.60 4.08
6575 9223 2.238084 TCATAGTGGAGGACAGTGCT 57.762 50.000 0.00 0.00 33.87 4.40
6576 9224 3.550437 AATCATAGTGGAGGACAGTGC 57.450 47.619 0.00 0.00 33.87 4.40
6577 9225 8.642432 TCTAATAAATCATAGTGGAGGACAGTG 58.358 37.037 0.00 0.00 33.87 3.66
6578 9226 8.783660 TCTAATAAATCATAGTGGAGGACAGT 57.216 34.615 0.00 0.00 36.50 3.55
6580 9228 9.379770 TCATCTAATAAATCATAGTGGAGGACA 57.620 33.333 0.00 0.00 0.00 4.02
6604 9256 3.570125 TGGTACGCACAATGGAAATTTCA 59.430 39.130 19.49 6.65 0.00 2.69
6605 9257 4.165779 CTGGTACGCACAATGGAAATTTC 58.834 43.478 9.83 9.83 0.00 2.17
6609 9265 0.878416 GCTGGTACGCACAATGGAAA 59.122 50.000 0.00 0.00 0.00 3.13
6694 9351 3.257393 CTGCTCAGTTTCATTAGCGTCT 58.743 45.455 0.00 0.00 37.80 4.18
6741 9398 2.437359 GCGGATGCTTCAGTGGCT 60.437 61.111 1.64 0.00 38.39 4.75
6776 9433 3.829886 TTTTGCAGGAGAAAGCATACG 57.170 42.857 0.00 0.00 40.94 3.06
6805 9462 9.349713 TGTGAAACTATGAGGTAAAATCTTTGT 57.650 29.630 0.00 0.00 38.04 2.83
6813 9470 9.268268 CACTTAACTGTGAAACTATGAGGTAAA 57.732 33.333 0.00 0.00 40.12 2.01
6830 9487 8.964476 ATCCCATATGTAAACTCACTTAACTG 57.036 34.615 1.24 0.00 0.00 3.16
6832 9489 9.826574 TGTATCCCATATGTAAACTCACTTAAC 57.173 33.333 1.24 0.00 0.00 2.01
6850 9507 9.565090 CATGAGAAGATTCTTTTATGTATCCCA 57.435 33.333 0.00 0.00 37.73 4.37
6851 9508 9.566432 ACATGAGAAGATTCTTTTATGTATCCC 57.434 33.333 16.10 0.00 37.73 3.85
6861 9518 9.258826 CGATCATTAGACATGAGAAGATTCTTT 57.741 33.333 0.00 0.00 37.73 2.52
6862 9519 7.384660 GCGATCATTAGACATGAGAAGATTCTT 59.615 37.037 0.00 0.00 37.73 2.52
6863 9520 6.867816 GCGATCATTAGACATGAGAAGATTCT 59.132 38.462 0.00 0.00 41.00 2.40
6864 9521 6.644181 TGCGATCATTAGACATGAGAAGATTC 59.356 38.462 0.00 0.00 0.00 2.52
6865 9522 6.519382 TGCGATCATTAGACATGAGAAGATT 58.481 36.000 0.00 0.00 0.00 2.40
6866 9523 6.094193 TGCGATCATTAGACATGAGAAGAT 57.906 37.500 0.00 0.00 0.00 2.40
6867 9524 5.520376 TGCGATCATTAGACATGAGAAGA 57.480 39.130 0.00 0.00 0.00 2.87
6868 9525 5.752472 AGTTGCGATCATTAGACATGAGAAG 59.248 40.000 0.00 0.00 0.00 2.85
6869 9526 5.664457 AGTTGCGATCATTAGACATGAGAA 58.336 37.500 0.00 0.00 0.00 2.87
6870 9527 5.268118 AGTTGCGATCATTAGACATGAGA 57.732 39.130 0.00 0.00 0.00 3.27
6871 9528 5.980698 AAGTTGCGATCATTAGACATGAG 57.019 39.130 0.00 0.00 0.00 2.90
6872 9529 7.010460 CACTTAAGTTGCGATCATTAGACATGA 59.990 37.037 5.07 0.00 0.00 3.07
6873 9530 7.010460 TCACTTAAGTTGCGATCATTAGACATG 59.990 37.037 5.07 0.00 0.00 3.21
6874 9531 7.041721 TCACTTAAGTTGCGATCATTAGACAT 58.958 34.615 5.07 0.00 0.00 3.06
6875 9532 6.394809 TCACTTAAGTTGCGATCATTAGACA 58.605 36.000 5.07 0.00 0.00 3.41
6876 9533 6.531948 ACTCACTTAAGTTGCGATCATTAGAC 59.468 38.462 5.07 0.00 0.00 2.59
6877 9534 6.631016 ACTCACTTAAGTTGCGATCATTAGA 58.369 36.000 5.07 0.00 0.00 2.10
6878 9535 6.754209 AGACTCACTTAAGTTGCGATCATTAG 59.246 38.462 5.07 0.00 0.00 1.73
6879 9536 6.631016 AGACTCACTTAAGTTGCGATCATTA 58.369 36.000 5.07 0.00 0.00 1.90
6880 9537 5.482908 AGACTCACTTAAGTTGCGATCATT 58.517 37.500 5.07 0.00 0.00 2.57
6881 9538 5.078411 AGACTCACTTAAGTTGCGATCAT 57.922 39.130 5.07 0.00 0.00 2.45
6882 9539 4.521130 AGACTCACTTAAGTTGCGATCA 57.479 40.909 5.07 0.00 0.00 2.92
6883 9540 7.640852 TCTATAGACTCACTTAAGTTGCGATC 58.359 38.462 5.07 0.06 0.00 3.69
6884 9541 7.569639 TCTATAGACTCACTTAAGTTGCGAT 57.430 36.000 5.07 0.82 0.00 4.58
6885 9542 6.458478 GCTCTATAGACTCACTTAAGTTGCGA 60.458 42.308 5.07 0.00 0.00 5.10
6886 9543 5.683743 GCTCTATAGACTCACTTAAGTTGCG 59.316 44.000 5.07 0.00 0.00 4.85
6887 9544 6.695278 CAGCTCTATAGACTCACTTAAGTTGC 59.305 42.308 5.07 0.00 0.00 4.17
6888 9545 6.695278 GCAGCTCTATAGACTCACTTAAGTTG 59.305 42.308 5.07 4.65 0.00 3.16
6889 9546 6.605594 AGCAGCTCTATAGACTCACTTAAGTT 59.394 38.462 5.07 0.00 0.00 2.66
6890 9547 6.126409 AGCAGCTCTATAGACTCACTTAAGT 58.874 40.000 1.12 1.12 0.00 2.24
6891 9548 6.633500 AGCAGCTCTATAGACTCACTTAAG 57.367 41.667 0.00 0.00 0.00 1.85
6892 9549 9.794719 TTATAGCAGCTCTATAGACTCACTTAA 57.205 33.333 0.00 2.56 40.34 1.85
6893 9550 9.967451 ATTATAGCAGCTCTATAGACTCACTTA 57.033 33.333 0.00 0.00 40.34 2.24
6894 9551 8.877864 ATTATAGCAGCTCTATAGACTCACTT 57.122 34.615 0.00 0.00 40.34 3.16
6895 9552 8.328758 AGATTATAGCAGCTCTATAGACTCACT 58.671 37.037 0.00 4.56 40.34 3.41
6896 9553 8.506168 AGATTATAGCAGCTCTATAGACTCAC 57.494 38.462 0.00 0.00 40.34 3.51
6897 9554 9.527157 AAAGATTATAGCAGCTCTATAGACTCA 57.473 33.333 0.00 1.29 40.34 3.41
6899 9556 9.527157 TGAAAGATTATAGCAGCTCTATAGACT 57.473 33.333 0.00 0.00 40.34 3.24
6905 9562 9.836864 TGAAAATGAAAGATTATAGCAGCTCTA 57.163 29.630 0.00 0.00 0.00 2.43
6906 9563 8.743085 TGAAAATGAAAGATTATAGCAGCTCT 57.257 30.769 0.00 0.00 0.00 4.09
6907 9564 9.793252 TTTGAAAATGAAAGATTATAGCAGCTC 57.207 29.630 0.00 0.00 0.00 4.09
6917 9574 9.631257 AACATCCCTTTTTGAAAATGAAAGATT 57.369 25.926 5.25 0.00 33.35 2.40
6923 9580 9.927668 GATCTTAACATCCCTTTTTGAAAATGA 57.072 29.630 5.25 0.00 0.00 2.57
6924 9581 9.709495 TGATCTTAACATCCCTTTTTGAAAATG 57.291 29.630 0.00 0.00 0.00 2.32
6933 9590 9.326413 CGTAGTTAATGATCTTAACATCCCTTT 57.674 33.333 20.33 8.38 37.35 3.11
6934 9591 8.701895 TCGTAGTTAATGATCTTAACATCCCTT 58.298 33.333 20.33 8.82 37.35 3.95
6935 9592 8.246430 TCGTAGTTAATGATCTTAACATCCCT 57.754 34.615 20.33 9.27 37.35 4.20
6936 9593 7.599245 CCTCGTAGTTAATGATCTTAACATCCC 59.401 40.741 20.33 10.24 37.35 3.85
6937 9594 7.599245 CCCTCGTAGTTAATGATCTTAACATCC 59.401 40.741 20.33 11.72 37.35 3.51
6938 9595 7.116519 GCCCTCGTAGTTAATGATCTTAACATC 59.883 40.741 20.33 14.50 37.35 3.06
6939 9596 6.929606 GCCCTCGTAGTTAATGATCTTAACAT 59.070 38.462 20.33 12.70 37.35 2.71
6940 9597 6.127281 TGCCCTCGTAGTTAATGATCTTAACA 60.127 38.462 20.33 10.36 37.35 2.41
6941 9598 6.278363 TGCCCTCGTAGTTAATGATCTTAAC 58.722 40.000 14.75 14.75 35.66 2.01
6942 9599 6.474140 TGCCCTCGTAGTTAATGATCTTAA 57.526 37.500 0.00 0.00 0.00 1.85
6943 9600 6.097839 AGTTGCCCTCGTAGTTAATGATCTTA 59.902 38.462 0.00 0.00 0.00 2.10
6944 9601 5.104900 AGTTGCCCTCGTAGTTAATGATCTT 60.105 40.000 0.00 0.00 0.00 2.40
6945 9602 4.406003 AGTTGCCCTCGTAGTTAATGATCT 59.594 41.667 0.00 0.00 0.00 2.75
6946 9603 4.694339 AGTTGCCCTCGTAGTTAATGATC 58.306 43.478 0.00 0.00 0.00 2.92
6947 9604 4.755266 AGTTGCCCTCGTAGTTAATGAT 57.245 40.909 0.00 0.00 0.00 2.45
6948 9605 4.439153 CGTAGTTGCCCTCGTAGTTAATGA 60.439 45.833 0.00 0.00 0.00 2.57
6949 9606 3.795101 CGTAGTTGCCCTCGTAGTTAATG 59.205 47.826 0.00 0.00 0.00 1.90
6950 9607 3.445096 ACGTAGTTGCCCTCGTAGTTAAT 59.555 43.478 0.00 0.00 37.78 1.40
6951 9608 2.819608 ACGTAGTTGCCCTCGTAGTTAA 59.180 45.455 0.00 0.00 37.78 2.01
6952 9609 2.436417 ACGTAGTTGCCCTCGTAGTTA 58.564 47.619 0.00 0.00 37.78 2.24
6953 9610 1.251251 ACGTAGTTGCCCTCGTAGTT 58.749 50.000 0.00 0.00 37.78 2.24
6954 9611 2.952714 ACGTAGTTGCCCTCGTAGT 58.047 52.632 0.00 0.00 37.78 2.73
6967 9624 4.301628 ACCAGTTCCTTTTACGAACGTAG 58.698 43.478 7.12 0.00 43.55 3.51
6968 9625 4.320608 ACCAGTTCCTTTTACGAACGTA 57.679 40.909 2.89 2.89 43.55 3.57
6969 9626 3.183793 ACCAGTTCCTTTTACGAACGT 57.816 42.857 5.03 5.03 43.55 3.99
6970 9627 4.925054 TCATACCAGTTCCTTTTACGAACG 59.075 41.667 0.00 0.00 43.55 3.95
6971 9628 5.930569 AGTCATACCAGTTCCTTTTACGAAC 59.069 40.000 0.00 0.00 39.96 3.95
6972 9629 5.929992 CAGTCATACCAGTTCCTTTTACGAA 59.070 40.000 0.00 0.00 0.00 3.85
6973 9630 5.475719 CAGTCATACCAGTTCCTTTTACGA 58.524 41.667 0.00 0.00 0.00 3.43
6974 9631 4.630069 CCAGTCATACCAGTTCCTTTTACG 59.370 45.833 0.00 0.00 0.00 3.18
6975 9632 5.801380 TCCAGTCATACCAGTTCCTTTTAC 58.199 41.667 0.00 0.00 0.00 2.01
6976 9633 6.636454 ATCCAGTCATACCAGTTCCTTTTA 57.364 37.500 0.00 0.00 0.00 1.52
6977 9634 4.993705 TCCAGTCATACCAGTTCCTTTT 57.006 40.909 0.00 0.00 0.00 2.27
6978 9635 6.636454 TTATCCAGTCATACCAGTTCCTTT 57.364 37.500 0.00 0.00 0.00 3.11
6979 9636 6.831664 ATTATCCAGTCATACCAGTTCCTT 57.168 37.500 0.00 0.00 0.00 3.36
6980 9637 6.831664 AATTATCCAGTCATACCAGTTCCT 57.168 37.500 0.00 0.00 0.00 3.36
6981 9638 7.736893 AGTAATTATCCAGTCATACCAGTTCC 58.263 38.462 0.00 0.00 0.00 3.62
6982 9639 9.915629 CTAGTAATTATCCAGTCATACCAGTTC 57.084 37.037 0.00 0.00 0.00 3.01
6983 9640 8.368668 GCTAGTAATTATCCAGTCATACCAGTT 58.631 37.037 0.00 0.00 0.00 3.16
6984 9641 7.509318 TGCTAGTAATTATCCAGTCATACCAGT 59.491 37.037 0.00 0.00 0.00 4.00
6985 9642 7.896811 TGCTAGTAATTATCCAGTCATACCAG 58.103 38.462 0.00 0.00 0.00 4.00
6986 9643 7.849322 TGCTAGTAATTATCCAGTCATACCA 57.151 36.000 0.00 0.00 0.00 3.25
6987 9644 7.702772 CGATGCTAGTAATTATCCAGTCATACC 59.297 40.741 0.00 0.00 0.00 2.73
6988 9645 8.459635 TCGATGCTAGTAATTATCCAGTCATAC 58.540 37.037 0.00 0.00 0.00 2.39
6989 9646 8.459635 GTCGATGCTAGTAATTATCCAGTCATA 58.540 37.037 0.00 0.00 0.00 2.15
6990 9647 7.039714 TGTCGATGCTAGTAATTATCCAGTCAT 60.040 37.037 0.00 0.00 0.00 3.06
6991 9648 6.264518 TGTCGATGCTAGTAATTATCCAGTCA 59.735 38.462 0.00 0.00 0.00 3.41
6992 9649 6.678878 TGTCGATGCTAGTAATTATCCAGTC 58.321 40.000 0.00 0.00 0.00 3.51
6993 9650 6.650427 TGTCGATGCTAGTAATTATCCAGT 57.350 37.500 0.00 0.00 0.00 4.00
6994 9651 6.923508 TGTTGTCGATGCTAGTAATTATCCAG 59.076 38.462 0.00 0.00 0.00 3.86
6995 9652 6.811954 TGTTGTCGATGCTAGTAATTATCCA 58.188 36.000 0.00 0.00 0.00 3.41
6996 9653 7.598869 TGATGTTGTCGATGCTAGTAATTATCC 59.401 37.037 0.00 0.00 0.00 2.59
6997 9654 8.520835 TGATGTTGTCGATGCTAGTAATTATC 57.479 34.615 0.00 0.00 0.00 1.75
6998 9655 9.494271 AATGATGTTGTCGATGCTAGTAATTAT 57.506 29.630 0.00 0.00 0.00 1.28
6999 9656 8.887036 AATGATGTTGTCGATGCTAGTAATTA 57.113 30.769 0.00 0.00 0.00 1.40
7000 9657 7.792374 AATGATGTTGTCGATGCTAGTAATT 57.208 32.000 0.00 0.00 0.00 1.40
7001 9658 8.887036 TTAATGATGTTGTCGATGCTAGTAAT 57.113 30.769 0.00 0.00 0.00 1.89
7002 9659 8.764287 CATTAATGATGTTGTCGATGCTAGTAA 58.236 33.333 10.04 0.00 0.00 2.24
7003 9660 7.926018 ACATTAATGATGTTGTCGATGCTAGTA 59.074 33.333 22.16 0.00 46.80 1.82
7004 9661 6.763135 ACATTAATGATGTTGTCGATGCTAGT 59.237 34.615 22.16 0.00 46.80 2.57
7005 9662 7.182361 ACATTAATGATGTTGTCGATGCTAG 57.818 36.000 22.16 0.00 46.80 3.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.