Multiple sequence alignment - TraesCS4A01G281800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G281800 chr4A 100.000 3103 0 0 1 3103 589660425 589663527 0.000000e+00 5731
1 TraesCS4A01G281800 chr4A 90.760 855 32 23 1016 1829 589835041 589835889 0.000000e+00 1098
2 TraesCS4A01G281800 chr4A 88.066 662 48 14 928 1564 589812909 589813564 0.000000e+00 756
3 TraesCS4A01G281800 chr4A 93.763 481 27 2 1844 2324 589716526 589717003 0.000000e+00 719
4 TraesCS4A01G281800 chr4A 93.208 427 25 1 1723 2145 589813728 589814154 2.630000e-175 625
5 TraesCS4A01G281800 chr4A 87.179 507 50 11 274 776 589785324 589784829 2.090000e-156 562
6 TraesCS4A01G281800 chr4A 86.869 495 55 9 281 773 589800019 589800505 2.100000e-151 545
7 TraesCS4A01G281800 chr4A 93.286 283 18 1 1826 2108 589835934 589836215 1.720000e-112 416
8 TraesCS4A01G281800 chr4A 96.939 98 3 0 284 381 589651487 589651584 6.880000e-37 165
9 TraesCS4A01G281800 chr4D 87.718 1433 102 34 926 2324 12668625 12667233 0.000000e+00 1604
10 TraesCS4A01G281800 chr4D 91.555 521 30 7 986 1493 12713340 12713859 0.000000e+00 706
11 TraesCS4A01G281800 chr4D 93.667 300 19 0 2025 2324 12715239 12715538 1.700000e-122 449
12 TraesCS4A01G281800 chr4D 89.753 283 27 1 1826 2108 12714196 12714476 8.180000e-96 361
13 TraesCS4A01G281800 chr1A 99.093 772 5 2 2333 3103 61031838 61031068 0.000000e+00 1386
14 TraesCS4A01G281800 chr1B 94.560 772 38 3 2333 3103 9634176 9634944 0.000000e+00 1190
15 TraesCS4A01G281800 chr1B 86.447 546 40 5 2333 2864 13532855 13532330 4.490000e-158 568
16 TraesCS4A01G281800 chr1B 98.630 292 3 1 1 291 681023301 681023010 1.650000e-142 516
17 TraesCS4A01G281800 chr1B 98.611 288 4 0 1 288 603291576 603291863 7.680000e-141 510
18 TraesCS4A01G281800 chr1B 86.797 409 28 16 2487 2895 81755035 81755417 1.710000e-117 433
19 TraesCS4A01G281800 chr1B 92.946 241 12 2 2868 3103 13532244 13532004 2.290000e-91 346
20 TraesCS4A01G281800 chr6A 98.012 654 11 2 2333 2986 491036804 491036153 0.000000e+00 1134
21 TraesCS4A01G281800 chr6A 88.010 784 65 13 2333 3103 100052 99285 0.000000e+00 900
22 TraesCS4A01G281800 chr6A 98.611 288 3 1 1 287 590102380 590102093 2.760000e-140 508
23 TraesCS4A01G281800 chr4B 93.939 660 28 5 1677 2324 23415037 23415696 0.000000e+00 987
24 TraesCS4A01G281800 chr4B 88.873 701 57 16 927 1610 23393014 23392318 0.000000e+00 843
25 TraesCS4A01G281800 chr4B 89.267 559 28 14 1061 1588 23414479 23415036 0.000000e+00 671
26 TraesCS4A01G281800 chr4B 90.664 482 31 6 1638 2108 23392257 23391779 2.030000e-176 628
27 TraesCS4A01G281800 chr4B 83.729 295 19 6 2030 2322 23274367 23274100 5.140000e-63 252
28 TraesCS4A01G281800 chr4B 88.889 171 16 2 1010 1180 23382550 23382383 1.130000e-49 207
29 TraesCS4A01G281800 chr4B 88.824 170 15 2 1814 1979 23274541 23274372 4.060000e-49 206
30 TraesCS4A01G281800 chr4B 80.282 284 34 17 1683 1960 23382020 23381753 8.780000e-46 195
31 TraesCS4A01G281800 chr4B 85.549 173 18 7 281 450 23396126 23395958 1.140000e-39 174
32 TraesCS4A01G281800 chr4B 83.929 168 13 10 1508 1674 23382292 23382138 6.930000e-32 148
33 TraesCS4A01G281800 chr4B 88.462 104 9 2 2221 2324 23381694 23381594 4.200000e-24 122
34 TraesCS4A01G281800 chr4B 92.000 75 0 2 826 894 23414095 23414169 1.970000e-17 100
35 TraesCS4A01G281800 chr5A 99.002 401 3 1 2333 2733 650679494 650679893 0.000000e+00 717
36 TraesCS4A01G281800 chr5A 98.958 288 2 1 1 287 312240638 312240925 5.930000e-142 514
37 TraesCS4A01G281800 chr5A 94.065 337 5 2 2767 3103 650679892 650680213 5.980000e-137 497
38 TraesCS4A01G281800 chr5B 98.958 288 3 0 1 288 684783816 684784103 1.650000e-142 516
39 TraesCS4A01G281800 chr5B 90.491 326 26 4 1826 2150 697615553 697615874 2.860000e-115 425
40 TraesCS4A01G281800 chr7A 98.611 288 4 0 1 288 34449564 34449851 7.680000e-141 510
41 TraesCS4A01G281800 chr2B 98.282 291 5 0 1 291 632372793 632372503 7.680000e-141 510
42 TraesCS4A01G281800 chr2B 98.611 288 3 1 1 287 717926007 717926294 2.760000e-140 508
43 TraesCS4A01G281800 chr6B 98.611 288 3 1 1 287 704553513 704553226 2.760000e-140 508
44 TraesCS4A01G281800 chr3A 90.863 197 18 0 1270 1466 45125223 45125027 6.600000e-67 265
45 TraesCS4A01G281800 chr3D 89.899 198 18 2 1270 1466 32713200 32713004 1.430000e-63 254
46 TraesCS4A01G281800 chr3B 89.848 197 20 0 1270 1466 55366687 55366491 1.430000e-63 254
47 TraesCS4A01G281800 chrUn 85.870 184 25 1 2333 2516 461775365 461775547 8.780000e-46 195
48 TraesCS4A01G281800 chr7D 85.326 184 26 1 2333 2516 449466595 449466777 4.080000e-44 189
49 TraesCS4A01G281800 chr2D 85.326 184 26 1 2333 2516 23110015 23110197 4.080000e-44 189
50 TraesCS4A01G281800 chr2D 96.923 65 2 0 2931 2995 618707256 618707320 3.270000e-20 110
51 TraesCS4A01G281800 chr2A 73.970 461 90 21 2552 2995 749818485 749818932 3.200000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G281800 chr4A 589660425 589663527 3102 False 5731.000000 5731 100.000000 1 3103 1 chr4A.!!$F2 3102
1 TraesCS4A01G281800 chr4A 589835041 589836215 1174 False 757.000000 1098 92.023000 1016 2108 2 chr4A.!!$F6 1092
2 TraesCS4A01G281800 chr4A 589812909 589814154 1245 False 690.500000 756 90.637000 928 2145 2 chr4A.!!$F5 1217
3 TraesCS4A01G281800 chr4D 12667233 12668625 1392 True 1604.000000 1604 87.718000 926 2324 1 chr4D.!!$R1 1398
4 TraesCS4A01G281800 chr4D 12713340 12715538 2198 False 505.333333 706 91.658333 986 2324 3 chr4D.!!$F1 1338
5 TraesCS4A01G281800 chr1A 61031068 61031838 770 True 1386.000000 1386 99.093000 2333 3103 1 chr1A.!!$R1 770
6 TraesCS4A01G281800 chr1B 9634176 9634944 768 False 1190.000000 1190 94.560000 2333 3103 1 chr1B.!!$F1 770
7 TraesCS4A01G281800 chr1B 13532004 13532855 851 True 457.000000 568 89.696500 2333 3103 2 chr1B.!!$R2 770
8 TraesCS4A01G281800 chr6A 491036153 491036804 651 True 1134.000000 1134 98.012000 2333 2986 1 chr6A.!!$R2 653
9 TraesCS4A01G281800 chr6A 99285 100052 767 True 900.000000 900 88.010000 2333 3103 1 chr6A.!!$R1 770
10 TraesCS4A01G281800 chr4B 23414095 23415696 1601 False 586.000000 987 91.735333 826 2324 3 chr4B.!!$F1 1498
11 TraesCS4A01G281800 chr4B 23391779 23396126 4347 True 548.333333 843 88.362000 281 2108 3 chr4B.!!$R3 1827
12 TraesCS4A01G281800 chr5A 650679494 650680213 719 False 607.000000 717 96.533500 2333 3103 2 chr5A.!!$F2 770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
39 40 0.042581 TGGGACTACTGGAGGCATGA 59.957 55.0 0.0 0.0 33.03 3.07 F
559 3055 0.105194 TAAGGATGGGAGGCATCGGA 60.105 55.0 0.0 0.0 0.00 4.55 F
716 3212 0.238289 GGCGTTGTGTGAGTGGATTG 59.762 55.0 0.0 0.0 0.00 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1148 3793 2.363683 GTGGATGCAAGGGAGAAGAAG 58.636 52.381 0.00 0.0 0.00 2.85 R
1758 4701 2.650322 CGGGTTGTTTATACCAGCCAT 58.350 47.619 6.47 0.0 37.41 4.40 R
2330 6201 4.081322 ACTCCACAATCACCGTAAAACT 57.919 40.909 0.00 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.741985 TCGTGAGCATGTTGCCGG 60.742 61.111 0.00 0.00 46.52 6.13
18 19 4.465512 CGTGAGCATGTTGCCGGC 62.466 66.667 22.73 22.73 46.52 6.13
19 20 3.364441 GTGAGCATGTTGCCGGCA 61.364 61.111 29.03 29.03 46.52 5.69
20 21 2.361483 TGAGCATGTTGCCGGCAT 60.361 55.556 33.25 15.11 46.52 4.40
21 22 2.103538 GAGCATGTTGCCGGCATG 59.896 61.111 33.25 26.59 46.52 4.06
22 23 3.420214 GAGCATGTTGCCGGCATGG 62.420 63.158 33.25 20.32 46.52 3.66
23 24 4.517815 GCATGTTGCCGGCATGGG 62.518 66.667 33.25 20.68 42.72 4.00
24 25 2.755064 CATGTTGCCGGCATGGGA 60.755 61.111 33.25 13.29 39.82 4.37
25 26 2.755469 ATGTTGCCGGCATGGGAC 60.755 61.111 33.25 25.57 38.10 4.46
26 27 3.286694 ATGTTGCCGGCATGGGACT 62.287 57.895 33.25 12.10 38.10 3.85
27 28 1.920734 ATGTTGCCGGCATGGGACTA 61.921 55.000 33.25 10.98 38.10 2.59
28 29 2.112815 GTTGCCGGCATGGGACTAC 61.113 63.158 33.25 20.08 38.10 2.73
29 30 2.297895 TTGCCGGCATGGGACTACT 61.298 57.895 33.25 0.00 38.10 2.57
30 31 2.203070 GCCGGCATGGGACTACTG 60.203 66.667 24.80 0.00 38.63 2.74
31 32 2.505982 CCGGCATGGGACTACTGG 59.494 66.667 0.00 0.00 0.00 4.00
32 33 2.063979 CCGGCATGGGACTACTGGA 61.064 63.158 0.00 0.00 0.00 3.86
33 34 1.443407 CGGCATGGGACTACTGGAG 59.557 63.158 0.00 0.00 0.00 3.86
34 35 1.832912 GGCATGGGACTACTGGAGG 59.167 63.158 0.00 0.00 0.00 4.30
35 36 1.147153 GCATGGGACTACTGGAGGC 59.853 63.158 0.00 0.00 0.00 4.70
36 37 1.626356 GCATGGGACTACTGGAGGCA 61.626 60.000 0.00 0.00 33.03 4.75
37 38 1.135094 CATGGGACTACTGGAGGCAT 58.865 55.000 0.00 0.00 33.03 4.40
38 39 1.135094 ATGGGACTACTGGAGGCATG 58.865 55.000 0.00 0.00 33.03 4.06
39 40 0.042581 TGGGACTACTGGAGGCATGA 59.957 55.000 0.00 0.00 33.03 3.07
40 41 1.344393 TGGGACTACTGGAGGCATGAT 60.344 52.381 0.00 0.00 33.03 2.45
41 42 1.071385 GGGACTACTGGAGGCATGATG 59.929 57.143 0.00 0.00 33.03 3.07
42 43 2.042464 GGACTACTGGAGGCATGATGA 58.958 52.381 0.00 0.00 33.03 2.92
43 44 2.636893 GGACTACTGGAGGCATGATGAT 59.363 50.000 0.00 0.00 33.03 2.45
44 45 3.072184 GGACTACTGGAGGCATGATGATT 59.928 47.826 0.00 0.00 33.03 2.57
45 46 4.314121 GACTACTGGAGGCATGATGATTC 58.686 47.826 0.00 0.00 30.86 2.52
46 47 3.972638 ACTACTGGAGGCATGATGATTCT 59.027 43.478 0.00 0.00 0.00 2.40
47 48 3.210232 ACTGGAGGCATGATGATTCTG 57.790 47.619 0.00 0.00 0.00 3.02
48 49 2.158652 ACTGGAGGCATGATGATTCTGG 60.159 50.000 0.00 0.00 0.00 3.86
49 50 2.105993 CTGGAGGCATGATGATTCTGGA 59.894 50.000 0.00 0.00 0.00 3.86
50 51 2.510800 TGGAGGCATGATGATTCTGGAA 59.489 45.455 0.00 0.00 0.00 3.53
51 52 3.139584 TGGAGGCATGATGATTCTGGAAT 59.860 43.478 0.00 0.00 0.00 3.01
52 53 4.351704 TGGAGGCATGATGATTCTGGAATA 59.648 41.667 0.00 0.00 0.00 1.75
53 54 5.163066 TGGAGGCATGATGATTCTGGAATAA 60.163 40.000 0.00 0.00 0.00 1.40
54 55 5.415077 GGAGGCATGATGATTCTGGAATAAG 59.585 44.000 0.00 0.00 0.00 1.73
55 56 6.196918 AGGCATGATGATTCTGGAATAAGA 57.803 37.500 0.00 0.00 0.00 2.10
56 57 6.239396 AGGCATGATGATTCTGGAATAAGAG 58.761 40.000 0.00 0.00 0.00 2.85
57 58 5.415077 GGCATGATGATTCTGGAATAAGAGG 59.585 44.000 0.00 0.00 0.00 3.69
58 59 6.236409 GCATGATGATTCTGGAATAAGAGGA 58.764 40.000 0.00 0.00 0.00 3.71
59 60 6.149142 GCATGATGATTCTGGAATAAGAGGAC 59.851 42.308 0.00 0.00 0.00 3.85
60 61 6.179906 TGATGATTCTGGAATAAGAGGACC 57.820 41.667 0.00 0.00 0.00 4.46
61 62 5.667172 TGATGATTCTGGAATAAGAGGACCA 59.333 40.000 0.00 0.00 0.00 4.02
62 63 6.331042 TGATGATTCTGGAATAAGAGGACCAT 59.669 38.462 0.00 0.00 0.00 3.55
63 64 6.581388 TGATTCTGGAATAAGAGGACCATT 57.419 37.500 0.00 0.00 0.00 3.16
64 65 7.690454 TGATTCTGGAATAAGAGGACCATTA 57.310 36.000 0.00 0.00 0.00 1.90
65 66 8.101309 TGATTCTGGAATAAGAGGACCATTAA 57.899 34.615 0.00 0.00 0.00 1.40
66 67 8.556589 TGATTCTGGAATAAGAGGACCATTAAA 58.443 33.333 0.00 0.00 0.00 1.52
67 68 9.408648 GATTCTGGAATAAGAGGACCATTAAAA 57.591 33.333 0.00 0.00 0.00 1.52
68 69 9.942526 ATTCTGGAATAAGAGGACCATTAAAAT 57.057 29.630 0.00 0.00 0.00 1.82
76 77 9.990868 ATAAGAGGACCATTAAAATAAACCACT 57.009 29.630 0.00 0.00 0.00 4.00
77 78 7.939784 AGAGGACCATTAAAATAAACCACTC 57.060 36.000 0.00 0.00 0.00 3.51
78 79 6.890268 AGAGGACCATTAAAATAAACCACTCC 59.110 38.462 0.00 0.00 0.00 3.85
79 80 5.955959 AGGACCATTAAAATAAACCACTCCC 59.044 40.000 0.00 0.00 0.00 4.30
80 81 5.128171 GGACCATTAAAATAAACCACTCCCC 59.872 44.000 0.00 0.00 0.00 4.81
81 82 5.656420 ACCATTAAAATAAACCACTCCCCA 58.344 37.500 0.00 0.00 0.00 4.96
82 83 6.085416 ACCATTAAAATAAACCACTCCCCAA 58.915 36.000 0.00 0.00 0.00 4.12
83 84 6.733334 ACCATTAAAATAAACCACTCCCCAAT 59.267 34.615 0.00 0.00 0.00 3.16
84 85 7.238723 ACCATTAAAATAAACCACTCCCCAATT 59.761 33.333 0.00 0.00 0.00 2.32
85 86 8.763601 CCATTAAAATAAACCACTCCCCAATTA 58.236 33.333 0.00 0.00 0.00 1.40
86 87 9.816354 CATTAAAATAAACCACTCCCCAATTAG 57.184 33.333 0.00 0.00 0.00 1.73
87 88 8.959676 TTAAAATAAACCACTCCCCAATTAGT 57.040 30.769 0.00 0.00 0.00 2.24
89 90 8.959676 AAAATAAACCACTCCCCAATTAGTAA 57.040 30.769 0.00 0.00 0.00 2.24
90 91 8.959676 AAATAAACCACTCCCCAATTAGTAAA 57.040 30.769 0.00 0.00 0.00 2.01
91 92 8.959676 AATAAACCACTCCCCAATTAGTAAAA 57.040 30.769 0.00 0.00 0.00 1.52
92 93 9.555411 AATAAACCACTCCCCAATTAGTAAAAT 57.445 29.630 0.00 0.00 0.00 1.82
93 94 6.850752 AACCACTCCCCAATTAGTAAAATG 57.149 37.500 0.00 0.00 0.00 2.32
94 95 5.899278 ACCACTCCCCAATTAGTAAAATGT 58.101 37.500 0.00 0.00 0.00 2.71
95 96 6.319715 ACCACTCCCCAATTAGTAAAATGTT 58.680 36.000 0.00 0.00 0.00 2.71
96 97 6.785466 ACCACTCCCCAATTAGTAAAATGTTT 59.215 34.615 0.00 0.00 0.00 2.83
97 98 7.291416 ACCACTCCCCAATTAGTAAAATGTTTT 59.709 33.333 0.00 0.00 0.00 2.43
98 99 7.817478 CCACTCCCCAATTAGTAAAATGTTTTC 59.183 37.037 0.00 0.00 0.00 2.29
99 100 7.817478 CACTCCCCAATTAGTAAAATGTTTTCC 59.183 37.037 0.00 0.00 0.00 3.13
100 101 7.511028 ACTCCCCAATTAGTAAAATGTTTTCCA 59.489 33.333 0.00 0.00 0.00 3.53
101 102 8.442660 TCCCCAATTAGTAAAATGTTTTCCAT 57.557 30.769 0.00 0.00 34.36 3.41
102 103 8.885346 TCCCCAATTAGTAAAATGTTTTCCATT 58.115 29.630 0.00 0.00 45.81 3.16
114 115 4.728534 TGTTTTCCATTTCGAAATAGGCG 58.271 39.130 22.33 10.54 32.00 5.52
115 116 4.102649 GTTTTCCATTTCGAAATAGGCGG 58.897 43.478 22.33 18.46 32.00 6.13
116 117 1.961793 TCCATTTCGAAATAGGCGGG 58.038 50.000 22.33 18.12 0.00 6.13
117 118 1.210967 TCCATTTCGAAATAGGCGGGT 59.789 47.619 22.33 0.00 0.00 5.28
118 119 1.333619 CCATTTCGAAATAGGCGGGTG 59.666 52.381 22.33 9.64 0.00 4.61
119 120 2.014128 CATTTCGAAATAGGCGGGTGT 58.986 47.619 22.33 0.00 0.00 4.16
120 121 3.199677 CATTTCGAAATAGGCGGGTGTA 58.800 45.455 22.33 0.00 0.00 2.90
121 122 2.298411 TTCGAAATAGGCGGGTGTAC 57.702 50.000 0.00 0.00 0.00 2.90
122 123 1.477553 TCGAAATAGGCGGGTGTACT 58.522 50.000 0.00 0.00 0.00 2.73
123 124 2.653726 TCGAAATAGGCGGGTGTACTA 58.346 47.619 0.00 0.00 0.00 1.82
124 125 3.225104 TCGAAATAGGCGGGTGTACTAT 58.775 45.455 0.00 0.00 0.00 2.12
125 126 4.397420 TCGAAATAGGCGGGTGTACTATA 58.603 43.478 0.00 0.00 0.00 1.31
126 127 4.826733 TCGAAATAGGCGGGTGTACTATAA 59.173 41.667 0.00 0.00 0.00 0.98
127 128 5.048504 TCGAAATAGGCGGGTGTACTATAAG 60.049 44.000 0.00 0.00 0.00 1.73
128 129 5.278660 CGAAATAGGCGGGTGTACTATAAGT 60.279 44.000 0.00 0.00 0.00 2.24
129 130 5.464030 AATAGGCGGGTGTACTATAAGTG 57.536 43.478 0.00 0.00 0.00 3.16
130 131 2.743553 AGGCGGGTGTACTATAAGTGT 58.256 47.619 0.00 0.00 0.00 3.55
131 132 3.102204 AGGCGGGTGTACTATAAGTGTT 58.898 45.455 0.00 0.00 0.00 3.32
132 133 3.118884 AGGCGGGTGTACTATAAGTGTTG 60.119 47.826 0.00 0.00 0.00 3.33
133 134 3.119029 GGCGGGTGTACTATAAGTGTTGA 60.119 47.826 0.00 0.00 0.00 3.18
134 135 4.110482 GCGGGTGTACTATAAGTGTTGAG 58.890 47.826 0.00 0.00 0.00 3.02
135 136 4.679662 CGGGTGTACTATAAGTGTTGAGG 58.320 47.826 0.00 0.00 0.00 3.86
136 137 4.159135 CGGGTGTACTATAAGTGTTGAGGT 59.841 45.833 0.00 0.00 0.00 3.85
137 138 5.337009 CGGGTGTACTATAAGTGTTGAGGTT 60.337 44.000 0.00 0.00 0.00 3.50
138 139 6.104665 GGGTGTACTATAAGTGTTGAGGTTC 58.895 44.000 0.00 0.00 0.00 3.62
139 140 6.070938 GGGTGTACTATAAGTGTTGAGGTTCT 60.071 42.308 0.00 0.00 0.00 3.01
140 141 7.123247 GGGTGTACTATAAGTGTTGAGGTTCTA 59.877 40.741 0.00 0.00 0.00 2.10
141 142 8.693625 GGTGTACTATAAGTGTTGAGGTTCTAT 58.306 37.037 0.00 0.00 0.00 1.98
142 143 9.517609 GTGTACTATAAGTGTTGAGGTTCTATG 57.482 37.037 0.00 0.00 0.00 2.23
143 144 8.692710 TGTACTATAAGTGTTGAGGTTCTATGG 58.307 37.037 0.00 0.00 0.00 2.74
144 145 6.583562 ACTATAAGTGTTGAGGTTCTATGGC 58.416 40.000 0.00 0.00 0.00 4.40
145 146 2.386661 AGTGTTGAGGTTCTATGGCG 57.613 50.000 0.00 0.00 0.00 5.69
146 147 1.623811 AGTGTTGAGGTTCTATGGCGT 59.376 47.619 0.00 0.00 0.00 5.68
147 148 2.038557 AGTGTTGAGGTTCTATGGCGTT 59.961 45.455 0.00 0.00 0.00 4.84
148 149 2.812011 GTGTTGAGGTTCTATGGCGTTT 59.188 45.455 0.00 0.00 0.00 3.60
149 150 3.252458 GTGTTGAGGTTCTATGGCGTTTT 59.748 43.478 0.00 0.00 0.00 2.43
150 151 3.252215 TGTTGAGGTTCTATGGCGTTTTG 59.748 43.478 0.00 0.00 0.00 2.44
151 152 3.410631 TGAGGTTCTATGGCGTTTTGA 57.589 42.857 0.00 0.00 0.00 2.69
152 153 3.334691 TGAGGTTCTATGGCGTTTTGAG 58.665 45.455 0.00 0.00 0.00 3.02
153 154 2.084546 AGGTTCTATGGCGTTTTGAGC 58.915 47.619 0.00 0.00 0.00 4.26
154 155 2.084546 GGTTCTATGGCGTTTTGAGCT 58.915 47.619 0.00 0.00 34.52 4.09
155 156 2.159517 GGTTCTATGGCGTTTTGAGCTG 60.160 50.000 0.00 0.00 34.52 4.24
156 157 2.472695 TCTATGGCGTTTTGAGCTGT 57.527 45.000 0.00 0.00 34.52 4.40
157 158 2.778299 TCTATGGCGTTTTGAGCTGTT 58.222 42.857 0.00 0.00 34.52 3.16
158 159 2.483877 TCTATGGCGTTTTGAGCTGTTG 59.516 45.455 0.00 0.00 34.52 3.33
159 160 1.032014 ATGGCGTTTTGAGCTGTTGT 58.968 45.000 0.00 0.00 34.52 3.32
160 161 1.669604 TGGCGTTTTGAGCTGTTGTA 58.330 45.000 0.00 0.00 34.52 2.41
161 162 2.017782 TGGCGTTTTGAGCTGTTGTAA 58.982 42.857 0.00 0.00 34.52 2.41
162 163 2.223386 TGGCGTTTTGAGCTGTTGTAAC 60.223 45.455 0.00 0.00 34.52 2.50
163 164 2.223386 GGCGTTTTGAGCTGTTGTAACA 60.223 45.455 0.00 0.00 37.37 2.41
164 165 2.781646 GCGTTTTGAGCTGTTGTAACAC 59.218 45.455 0.00 0.00 34.70 3.32
165 166 3.359654 CGTTTTGAGCTGTTGTAACACC 58.640 45.455 0.00 0.00 34.70 4.16
166 167 3.064820 CGTTTTGAGCTGTTGTAACACCT 59.935 43.478 0.00 0.00 34.70 4.00
167 168 4.598062 GTTTTGAGCTGTTGTAACACCTC 58.402 43.478 11.37 11.37 40.42 3.85
168 169 3.552132 TTGAGCTGTTGTAACACCTCA 57.448 42.857 15.28 15.28 45.16 3.86
169 170 2.833794 TGAGCTGTTGTAACACCTCAC 58.166 47.619 15.28 0.00 43.19 3.51
170 171 2.434336 TGAGCTGTTGTAACACCTCACT 59.566 45.455 15.28 0.83 43.19 3.41
171 172 3.118408 TGAGCTGTTGTAACACCTCACTT 60.118 43.478 15.28 0.00 43.19 3.16
172 173 3.877508 GAGCTGTTGTAACACCTCACTTT 59.122 43.478 12.79 0.00 39.99 2.66
173 174 3.627577 AGCTGTTGTAACACCTCACTTTG 59.372 43.478 0.00 0.00 34.70 2.77
174 175 3.243068 GCTGTTGTAACACCTCACTTTGG 60.243 47.826 0.00 0.00 34.70 3.28
175 176 3.945285 CTGTTGTAACACCTCACTTTGGT 59.055 43.478 0.00 0.00 38.53 3.67
176 177 5.100344 TGTTGTAACACCTCACTTTGGTA 57.900 39.130 0.00 0.00 35.80 3.25
177 178 4.877251 TGTTGTAACACCTCACTTTGGTAC 59.123 41.667 0.00 0.00 36.59 3.34
178 179 4.757019 TGTAACACCTCACTTTGGTACA 57.243 40.909 0.00 0.00 42.36 2.90
179 180 5.298989 TGTAACACCTCACTTTGGTACAT 57.701 39.130 0.00 0.00 40.26 2.29
180 181 5.302360 TGTAACACCTCACTTTGGTACATC 58.698 41.667 0.00 0.00 40.26 3.06
181 182 4.431416 AACACCTCACTTTGGTACATCA 57.569 40.909 0.00 0.00 39.30 3.07
182 183 4.640771 ACACCTCACTTTGGTACATCAT 57.359 40.909 0.00 0.00 39.30 2.45
183 184 4.985538 ACACCTCACTTTGGTACATCATT 58.014 39.130 0.00 0.00 39.30 2.57
184 185 5.003804 ACACCTCACTTTGGTACATCATTC 58.996 41.667 0.00 0.00 39.30 2.67
185 186 4.396166 CACCTCACTTTGGTACATCATTCC 59.604 45.833 0.00 0.00 39.30 3.01
186 187 4.289672 ACCTCACTTTGGTACATCATTCCT 59.710 41.667 0.00 0.00 39.30 3.36
187 188 5.487488 ACCTCACTTTGGTACATCATTCCTA 59.513 40.000 0.00 0.00 39.30 2.94
188 189 6.158695 ACCTCACTTTGGTACATCATTCCTAT 59.841 38.462 0.00 0.00 39.30 2.57
189 190 6.484643 CCTCACTTTGGTACATCATTCCTATG 59.515 42.308 0.00 0.00 39.30 2.23
190 191 6.957631 TCACTTTGGTACATCATTCCTATGT 58.042 36.000 0.00 0.00 39.30 2.29
191 192 8.084985 TCACTTTGGTACATCATTCCTATGTA 57.915 34.615 0.00 0.00 39.30 2.29
192 193 8.204160 TCACTTTGGTACATCATTCCTATGTAG 58.796 37.037 0.00 0.00 39.76 2.74
193 194 8.204160 CACTTTGGTACATCATTCCTATGTAGA 58.796 37.037 0.00 0.00 39.76 2.59
194 195 8.768397 ACTTTGGTACATCATTCCTATGTAGAA 58.232 33.333 0.00 0.00 39.76 2.10
195 196 9.784531 CTTTGGTACATCATTCCTATGTAGAAT 57.215 33.333 0.00 0.00 39.76 2.40
197 198 7.679783 TGGTACATCATTCCTATGTAGAATGG 58.320 38.462 12.21 2.16 46.91 3.16
198 199 7.106239 GGTACATCATTCCTATGTAGAATGGG 58.894 42.308 12.21 8.39 46.91 4.00
199 200 5.564550 ACATCATTCCTATGTAGAATGGGC 58.435 41.667 12.21 0.00 46.91 5.36
200 201 4.271696 TCATTCCTATGTAGAATGGGCG 57.728 45.455 12.21 0.00 46.91 6.13
201 202 3.901222 TCATTCCTATGTAGAATGGGCGA 59.099 43.478 12.21 0.00 46.91 5.54
202 203 4.346709 TCATTCCTATGTAGAATGGGCGAA 59.653 41.667 12.21 0.00 46.91 4.70
203 204 4.974645 TTCCTATGTAGAATGGGCGAAT 57.025 40.909 0.00 0.00 0.00 3.34
204 205 4.271696 TCCTATGTAGAATGGGCGAATG 57.728 45.455 0.00 0.00 0.00 2.67
205 206 3.007940 TCCTATGTAGAATGGGCGAATGG 59.992 47.826 0.00 0.00 0.00 3.16
206 207 3.007940 CCTATGTAGAATGGGCGAATGGA 59.992 47.826 0.00 0.00 0.00 3.41
207 208 2.620251 TGTAGAATGGGCGAATGGAG 57.380 50.000 0.00 0.00 0.00 3.86
208 209 1.837439 TGTAGAATGGGCGAATGGAGT 59.163 47.619 0.00 0.00 0.00 3.85
209 210 2.238646 TGTAGAATGGGCGAATGGAGTT 59.761 45.455 0.00 0.00 0.00 3.01
210 211 3.452990 TGTAGAATGGGCGAATGGAGTTA 59.547 43.478 0.00 0.00 0.00 2.24
211 212 3.644966 AGAATGGGCGAATGGAGTTAA 57.355 42.857 0.00 0.00 0.00 2.01
212 213 3.545703 AGAATGGGCGAATGGAGTTAAG 58.454 45.455 0.00 0.00 0.00 1.85
213 214 1.680338 ATGGGCGAATGGAGTTAAGC 58.320 50.000 0.00 0.00 0.00 3.09
214 215 0.393808 TGGGCGAATGGAGTTAAGCC 60.394 55.000 0.00 0.00 40.80 4.35
215 216 0.107165 GGGCGAATGGAGTTAAGCCT 60.107 55.000 4.24 0.00 41.10 4.58
216 217 1.140252 GGGCGAATGGAGTTAAGCCTA 59.860 52.381 4.24 0.00 41.10 3.93
217 218 2.420967 GGGCGAATGGAGTTAAGCCTAA 60.421 50.000 4.24 0.00 41.10 2.69
218 219 2.612672 GGCGAATGGAGTTAAGCCTAAC 59.387 50.000 0.00 0.00 39.35 2.34
219 220 2.284417 GCGAATGGAGTTAAGCCTAACG 59.716 50.000 0.00 0.00 42.02 3.18
220 221 3.777478 CGAATGGAGTTAAGCCTAACGA 58.223 45.455 0.00 0.00 42.02 3.85
221 222 4.369182 CGAATGGAGTTAAGCCTAACGAT 58.631 43.478 0.00 0.00 42.02 3.73
222 223 4.444720 CGAATGGAGTTAAGCCTAACGATC 59.555 45.833 0.00 0.00 42.02 3.69
223 224 5.353394 AATGGAGTTAAGCCTAACGATCA 57.647 39.130 0.00 1.25 42.02 2.92
224 225 4.811969 TGGAGTTAAGCCTAACGATCAA 57.188 40.909 0.00 0.00 42.02 2.57
225 226 4.755411 TGGAGTTAAGCCTAACGATCAAG 58.245 43.478 0.00 0.00 42.02 3.02
226 227 4.120589 GGAGTTAAGCCTAACGATCAAGG 58.879 47.826 0.00 0.00 42.02 3.61
227 228 4.120589 GAGTTAAGCCTAACGATCAAGGG 58.879 47.826 7.63 0.00 42.02 3.95
228 229 3.118371 AGTTAAGCCTAACGATCAAGGGG 60.118 47.826 7.63 0.00 42.02 4.79
229 230 0.546598 AAGCCTAACGATCAAGGGGG 59.453 55.000 7.63 0.00 33.17 5.40
230 231 0.326238 AGCCTAACGATCAAGGGGGA 60.326 55.000 7.63 0.00 33.17 4.81
231 232 0.106894 GCCTAACGATCAAGGGGGAG 59.893 60.000 7.63 0.00 33.17 4.30
232 233 1.789523 CCTAACGATCAAGGGGGAGA 58.210 55.000 0.00 0.00 0.00 3.71
233 234 2.116238 CCTAACGATCAAGGGGGAGAA 58.884 52.381 0.00 0.00 0.00 2.87
234 235 2.706190 CCTAACGATCAAGGGGGAGAAT 59.294 50.000 0.00 0.00 0.00 2.40
235 236 2.717639 AACGATCAAGGGGGAGAATG 57.282 50.000 0.00 0.00 0.00 2.67
236 237 1.584724 ACGATCAAGGGGGAGAATGT 58.415 50.000 0.00 0.00 0.00 2.71
237 238 1.916181 ACGATCAAGGGGGAGAATGTT 59.084 47.619 0.00 0.00 0.00 2.71
238 239 2.292267 CGATCAAGGGGGAGAATGTTG 58.708 52.381 0.00 0.00 0.00 3.33
239 240 2.659428 GATCAAGGGGGAGAATGTTGG 58.341 52.381 0.00 0.00 0.00 3.77
240 241 1.455822 TCAAGGGGGAGAATGTTGGT 58.544 50.000 0.00 0.00 0.00 3.67
241 242 1.786441 TCAAGGGGGAGAATGTTGGTT 59.214 47.619 0.00 0.00 0.00 3.67
242 243 2.178984 TCAAGGGGGAGAATGTTGGTTT 59.821 45.455 0.00 0.00 0.00 3.27
243 244 2.972021 CAAGGGGGAGAATGTTGGTTTT 59.028 45.455 0.00 0.00 0.00 2.43
244 245 2.608623 AGGGGGAGAATGTTGGTTTTG 58.391 47.619 0.00 0.00 0.00 2.44
245 246 2.178984 AGGGGGAGAATGTTGGTTTTGA 59.821 45.455 0.00 0.00 0.00 2.69
246 247 3.173151 GGGGGAGAATGTTGGTTTTGAT 58.827 45.455 0.00 0.00 0.00 2.57
247 248 3.195610 GGGGGAGAATGTTGGTTTTGATC 59.804 47.826 0.00 0.00 0.00 2.92
248 249 4.089361 GGGGAGAATGTTGGTTTTGATCT 58.911 43.478 0.00 0.00 0.00 2.75
249 250 4.082026 GGGGAGAATGTTGGTTTTGATCTG 60.082 45.833 0.00 0.00 0.00 2.90
250 251 4.766891 GGGAGAATGTTGGTTTTGATCTGA 59.233 41.667 0.00 0.00 0.00 3.27
251 252 5.335976 GGGAGAATGTTGGTTTTGATCTGAC 60.336 44.000 0.00 0.00 0.00 3.51
252 253 5.362556 AGAATGTTGGTTTTGATCTGACG 57.637 39.130 0.00 0.00 0.00 4.35
253 254 4.216257 AGAATGTTGGTTTTGATCTGACGG 59.784 41.667 0.00 0.00 0.00 4.79
254 255 1.606668 TGTTGGTTTTGATCTGACGGC 59.393 47.619 0.00 0.00 0.00 5.68
255 256 1.880027 GTTGGTTTTGATCTGACGGCT 59.120 47.619 0.00 0.00 0.00 5.52
256 257 2.270352 TGGTTTTGATCTGACGGCTT 57.730 45.000 0.00 0.00 0.00 4.35
257 258 3.410631 TGGTTTTGATCTGACGGCTTA 57.589 42.857 0.00 0.00 0.00 3.09
258 259 3.745799 TGGTTTTGATCTGACGGCTTAA 58.254 40.909 0.00 0.00 0.00 1.85
259 260 4.138290 TGGTTTTGATCTGACGGCTTAAA 58.862 39.130 0.00 0.00 0.00 1.52
260 261 4.023536 TGGTTTTGATCTGACGGCTTAAAC 60.024 41.667 0.00 0.00 0.00 2.01
261 262 4.023536 GGTTTTGATCTGACGGCTTAAACA 60.024 41.667 0.00 0.00 0.00 2.83
262 263 5.147162 GTTTTGATCTGACGGCTTAAACAG 58.853 41.667 0.00 0.00 0.00 3.16
263 264 2.972625 TGATCTGACGGCTTAAACAGG 58.027 47.619 0.00 0.00 0.00 4.00
264 265 1.666189 GATCTGACGGCTTAAACAGGC 59.334 52.381 0.00 0.00 45.01 4.85
277 278 7.793927 GCTTAAACAGGCAGTTAGATCTATT 57.206 36.000 2.58 0.00 40.26 1.73
278 279 8.888579 GCTTAAACAGGCAGTTAGATCTATTA 57.111 34.615 2.58 0.00 40.26 0.98
279 280 8.983724 GCTTAAACAGGCAGTTAGATCTATTAG 58.016 37.037 2.58 0.00 40.26 1.73
282 283 7.906199 AACAGGCAGTTAGATCTATTAGTCT 57.094 36.000 2.58 0.43 39.09 3.24
283 284 8.998277 AACAGGCAGTTAGATCTATTAGTCTA 57.002 34.615 2.58 0.00 39.09 2.59
284 285 8.998277 ACAGGCAGTTAGATCTATTAGTCTAA 57.002 34.615 2.58 0.00 35.25 2.10
309 310 8.696043 ACAATAATACCACCTACTATGTACGA 57.304 34.615 0.00 0.00 0.00 3.43
312 313 6.630444 AATACCACCTACTATGTACGACTG 57.370 41.667 0.00 0.00 0.00 3.51
316 317 4.579340 CCACCTACTATGTACGACTGATGT 59.421 45.833 0.00 0.00 0.00 3.06
324 325 7.418408 ACTATGTACGACTGATGTCAATACAG 58.582 38.462 12.53 0.00 42.51 2.74
329 330 8.895737 TGTACGACTGATGTCAATACAGTATTA 58.104 33.333 5.44 0.00 43.49 0.98
342 343 4.355543 ACAGTATTAAATGCTTGGCACG 57.644 40.909 0.00 0.00 43.04 5.34
348 349 7.487829 CAGTATTAAATGCTTGGCACGTAATTT 59.512 33.333 11.87 10.14 43.04 1.82
349 350 6.885735 ATTAAATGCTTGGCACGTAATTTC 57.114 33.333 9.06 0.00 43.04 2.17
350 351 2.939460 ATGCTTGGCACGTAATTTCC 57.061 45.000 0.00 0.00 43.04 3.13
353 354 1.476488 GCTTGGCACGTAATTTCCCAT 59.524 47.619 0.00 0.00 0.00 4.00
385 387 6.669631 TGTCTATATATCCCCATCTTCGCTA 58.330 40.000 0.00 0.00 0.00 4.26
407 409 1.634757 TAACGCGTCCAAGCATGCAG 61.635 55.000 21.98 11.91 36.85 4.41
433 2928 7.588512 CACCAGAACAATAAGAAAAAGGAGAG 58.411 38.462 0.00 0.00 0.00 3.20
434 2929 6.717084 ACCAGAACAATAAGAAAAAGGAGAGG 59.283 38.462 0.00 0.00 0.00 3.69
493 2988 6.125327 TGATCACAATAAGAGAGACGAGAC 57.875 41.667 0.00 0.00 0.00 3.36
497 2992 5.122554 TCACAATAAGAGAGACGAGACTCAC 59.877 44.000 2.82 0.00 39.14 3.51
498 2993 5.004448 ACAATAAGAGAGACGAGACTCACA 58.996 41.667 2.82 0.00 39.14 3.58
504 2999 2.088423 GAGACGAGACTCACATCACCT 58.912 52.381 2.82 0.00 36.95 4.00
514 3009 4.253685 ACTCACATCACCTAATGTTTCCG 58.746 43.478 0.00 0.00 37.78 4.30
527 3023 6.801862 CCTAATGTTTCCGTTGTCTTCATTTC 59.198 38.462 0.00 0.00 0.00 2.17
533 3029 5.611796 TCCGTTGTCTTCATTTCTTCATG 57.388 39.130 0.00 0.00 0.00 3.07
534 3030 4.455533 TCCGTTGTCTTCATTTCTTCATGG 59.544 41.667 0.00 0.00 0.00 3.66
555 3051 1.527457 AGCTTAAGGATGGGAGGCAT 58.473 50.000 4.29 0.00 0.00 4.40
557 3053 1.879796 GCTTAAGGATGGGAGGCATCG 60.880 57.143 4.29 0.00 0.00 3.84
559 3055 0.105194 TAAGGATGGGAGGCATCGGA 60.105 55.000 0.00 0.00 0.00 4.55
564 3060 2.032860 ATGGGAGGCATCGGAGAACG 62.033 60.000 0.00 0.00 43.58 3.95
589 3085 2.763039 TCTCCACCATCATCCTAAGCA 58.237 47.619 0.00 0.00 0.00 3.91
590 3086 3.114606 TCTCCACCATCATCCTAAGCAA 58.885 45.455 0.00 0.00 0.00 3.91
599 3095 6.995091 ACCATCATCCTAAGCAAGACTAAATC 59.005 38.462 0.00 0.00 0.00 2.17
613 3109 5.805728 AGACTAAATCGTGGTTTCCTCATT 58.194 37.500 0.00 0.00 0.00 2.57
616 3112 6.001460 ACTAAATCGTGGTTTCCTCATTGAA 58.999 36.000 0.00 0.00 0.00 2.69
624 3120 5.714806 GTGGTTTCCTCATTGAATTCCCTAA 59.285 40.000 2.27 0.00 0.00 2.69
631 3127 5.247507 TCATTGAATTCCCTAACAATGCG 57.752 39.130 0.00 0.00 44.89 4.73
636 3132 2.279935 TTCCCTAACAATGCGGTGTT 57.720 45.000 9.48 9.48 43.95 3.32
642 3138 1.327303 AACAATGCGGTGTTGGTGAT 58.673 45.000 4.17 0.00 40.22 3.06
645 3141 0.251121 AATGCGGTGTTGGTGATGGA 60.251 50.000 0.00 0.00 0.00 3.41
656 3152 1.073763 TGGTGATGGAGTTGTTCCTGG 59.926 52.381 0.00 0.00 46.92 4.45
658 3154 1.073923 GTGATGGAGTTGTTCCTGGGT 59.926 52.381 0.00 0.00 46.92 4.51
662 3158 1.235281 GGAGTTGTTCCTGGGTTCGC 61.235 60.000 0.00 0.00 43.16 4.70
663 3159 0.250338 GAGTTGTTCCTGGGTTCGCT 60.250 55.000 0.00 0.00 0.00 4.93
664 3160 0.535102 AGTTGTTCCTGGGTTCGCTG 60.535 55.000 0.00 0.00 0.00 5.18
665 3161 1.228124 TTGTTCCTGGGTTCGCTGG 60.228 57.895 0.00 6.48 0.00 4.85
667 3163 3.565214 TTCCTGGGTTCGCTGGCA 61.565 61.111 7.66 0.00 0.00 4.92
668 3164 2.905996 TTCCTGGGTTCGCTGGCAT 61.906 57.895 7.66 0.00 0.00 4.40
669 3165 1.558167 TTCCTGGGTTCGCTGGCATA 61.558 55.000 7.66 0.00 0.00 3.14
671 3167 1.376609 CCTGGGTTCGCTGGCATAAC 61.377 60.000 0.00 0.00 0.00 1.89
672 3168 1.376609 CTGGGTTCGCTGGCATAACC 61.377 60.000 14.77 14.77 41.62 2.85
678 3174 1.037493 TCGCTGGCATAACCGAGTAT 58.963 50.000 0.00 0.00 43.94 2.12
679 3175 1.000607 TCGCTGGCATAACCGAGTATC 60.001 52.381 0.00 0.00 43.94 2.24
680 3176 1.269569 CGCTGGCATAACCGAGTATCA 60.270 52.381 0.00 0.00 43.94 2.15
681 3177 2.135933 GCTGGCATAACCGAGTATCAC 58.864 52.381 0.00 0.00 43.94 3.06
682 3178 2.224066 GCTGGCATAACCGAGTATCACT 60.224 50.000 0.00 0.00 43.94 3.41
683 3179 3.005472 GCTGGCATAACCGAGTATCACTA 59.995 47.826 0.00 0.00 43.94 2.74
684 3180 4.322049 GCTGGCATAACCGAGTATCACTAT 60.322 45.833 0.00 0.00 43.94 2.12
685 3181 5.105877 GCTGGCATAACCGAGTATCACTATA 60.106 44.000 0.00 0.00 43.94 1.31
686 3182 6.510879 TGGCATAACCGAGTATCACTATAG 57.489 41.667 0.00 0.00 43.94 1.31
687 3183 5.417894 TGGCATAACCGAGTATCACTATAGG 59.582 44.000 4.43 0.00 43.94 2.57
688 3184 5.418209 GGCATAACCGAGTATCACTATAGGT 59.582 44.000 4.43 0.00 33.82 3.08
689 3185 6.404513 GGCATAACCGAGTATCACTATAGGTC 60.405 46.154 4.43 0.00 32.08 3.85
690 3186 6.374894 GCATAACCGAGTATCACTATAGGTCT 59.625 42.308 4.43 0.00 32.08 3.85
716 3212 0.238289 GGCGTTGTGTGAGTGGATTG 59.762 55.000 0.00 0.00 0.00 2.67
725 3221 2.106338 TGTGAGTGGATTGGTGTGATGT 59.894 45.455 0.00 0.00 0.00 3.06
731 3227 2.884012 TGGATTGGTGTGATGTTGTGAC 59.116 45.455 0.00 0.00 0.00 3.67
732 3228 3.149196 GGATTGGTGTGATGTTGTGACT 58.851 45.455 0.00 0.00 0.00 3.41
733 3229 4.202409 TGGATTGGTGTGATGTTGTGACTA 60.202 41.667 0.00 0.00 0.00 2.59
734 3230 4.943705 GGATTGGTGTGATGTTGTGACTAT 59.056 41.667 0.00 0.00 0.00 2.12
738 3234 3.120199 GGTGTGATGTTGTGACTATGTGC 60.120 47.826 0.00 0.00 0.00 4.57
758 3254 2.471749 GCGTGCGTGTGTACTTGTATTC 60.472 50.000 0.00 0.00 0.00 1.75
769 3265 8.584600 GTGTGTACTTGTATTCGATGTTTCTAG 58.415 37.037 0.00 0.00 0.00 2.43
780 3276 7.775729 TTCGATGTTTCTAGAAAAATTTCGC 57.224 32.000 19.71 8.14 41.92 4.70
782 3278 5.274823 CGATGTTTCTAGAAAAATTTCGCGC 60.275 40.000 19.71 0.00 41.92 6.86
783 3279 4.849883 TGTTTCTAGAAAAATTTCGCGCA 58.150 34.783 19.30 7.29 41.92 6.09
786 3282 6.075099 TGTTTCTAGAAAAATTTCGCGCAAAG 60.075 34.615 19.30 0.00 41.92 2.77
787 3283 5.351233 TCTAGAAAAATTTCGCGCAAAGA 57.649 34.783 8.75 0.00 41.92 2.52
788 3284 5.753744 TCTAGAAAAATTTCGCGCAAAGAA 58.246 33.333 8.75 0.00 41.92 2.52
789 3285 6.202937 TCTAGAAAAATTTCGCGCAAAGAAA 58.797 32.000 8.75 9.92 41.92 2.52
791 3287 6.100792 AGAAAAATTTCGCGCAAAGAAAAA 57.899 29.167 8.75 0.00 40.44 1.94
792 3288 6.184706 AGAAAAATTTCGCGCAAAGAAAAAG 58.815 32.000 8.75 0.00 40.44 2.27
793 3289 4.451379 AAATTTCGCGCAAAGAAAAAGG 57.549 36.364 8.75 0.00 40.44 3.11
794 3290 1.846541 TTTCGCGCAAAGAAAAAGGG 58.153 45.000 8.75 0.00 35.00 3.95
795 3291 0.741915 TTCGCGCAAAGAAAAAGGGT 59.258 45.000 8.75 0.00 0.00 4.34
796 3292 0.309612 TCGCGCAAAGAAAAAGGGTC 59.690 50.000 8.75 0.00 0.00 4.46
797 3293 0.310854 CGCGCAAAGAAAAAGGGTCT 59.689 50.000 8.75 0.00 0.00 3.85
798 3294 1.770957 GCGCAAAGAAAAAGGGTCTG 58.229 50.000 0.30 0.00 0.00 3.51
799 3295 1.602920 GCGCAAAGAAAAAGGGTCTGG 60.603 52.381 0.30 0.00 0.00 3.86
800 3296 1.953686 CGCAAAGAAAAAGGGTCTGGA 59.046 47.619 0.00 0.00 0.00 3.86
801 3297 2.360801 CGCAAAGAAAAAGGGTCTGGAA 59.639 45.455 0.00 0.00 0.00 3.53
802 3298 3.181480 CGCAAAGAAAAAGGGTCTGGAAA 60.181 43.478 0.00 0.00 0.00 3.13
803 3299 4.679372 CGCAAAGAAAAAGGGTCTGGAAAA 60.679 41.667 0.00 0.00 0.00 2.29
804 3300 4.811024 GCAAAGAAAAAGGGTCTGGAAAAG 59.189 41.667 0.00 0.00 0.00 2.27
805 3301 5.395214 GCAAAGAAAAAGGGTCTGGAAAAGA 60.395 40.000 0.00 0.00 0.00 2.52
806 3302 6.686378 GCAAAGAAAAAGGGTCTGGAAAAGAT 60.686 38.462 0.00 0.00 37.23 2.40
807 3303 7.471399 GCAAAGAAAAAGGGTCTGGAAAAGATA 60.471 37.037 0.00 0.00 37.23 1.98
808 3304 8.421002 CAAAGAAAAAGGGTCTGGAAAAGATAA 58.579 33.333 0.00 0.00 37.23 1.75
809 3305 8.547481 AAGAAAAAGGGTCTGGAAAAGATAAA 57.453 30.769 0.00 0.00 37.23 1.40
810 3306 8.547481 AGAAAAAGGGTCTGGAAAAGATAAAA 57.453 30.769 0.00 0.00 37.23 1.52
811 3307 9.159254 AGAAAAAGGGTCTGGAAAAGATAAAAT 57.841 29.630 0.00 0.00 37.23 1.82
812 3308 9.778741 GAAAAAGGGTCTGGAAAAGATAAAATT 57.221 29.630 0.00 0.00 37.23 1.82
813 3309 9.778741 AAAAAGGGTCTGGAAAAGATAAAATTC 57.221 29.630 0.00 0.00 37.23 2.17
814 3310 8.727100 AAAGGGTCTGGAAAAGATAAAATTCT 57.273 30.769 0.00 0.00 37.23 2.40
815 3311 7.946381 AGGGTCTGGAAAAGATAAAATTCTC 57.054 36.000 0.00 0.00 37.23 2.87
816 3312 6.892456 AGGGTCTGGAAAAGATAAAATTCTCC 59.108 38.462 0.00 0.00 37.23 3.71
817 3313 6.663523 GGGTCTGGAAAAGATAAAATTCTCCA 59.336 38.462 0.00 0.00 37.23 3.86
818 3314 7.178451 GGGTCTGGAAAAGATAAAATTCTCCAA 59.822 37.037 0.00 0.00 37.23 3.53
819 3315 8.585018 GGTCTGGAAAAGATAAAATTCTCCAAA 58.415 33.333 0.00 0.00 37.23 3.28
820 3316 9.981114 GTCTGGAAAAGATAAAATTCTCCAAAA 57.019 29.630 0.00 0.00 37.23 2.44
885 3386 7.615757 AGCTAAACTTTCCAAAGGCTATACATT 59.384 33.333 4.13 0.00 40.31 2.71
913 3414 1.271652 TGCGAAACTCCAAAGGCCATA 60.272 47.619 5.01 0.00 0.00 2.74
920 3421 4.796110 ACTCCAAAGGCCATACATACAT 57.204 40.909 5.01 0.00 0.00 2.29
921 3422 5.904984 ACTCCAAAGGCCATACATACATA 57.095 39.130 5.01 0.00 0.00 2.29
922 3423 5.621193 ACTCCAAAGGCCATACATACATAC 58.379 41.667 5.01 0.00 0.00 2.39
923 3424 5.131977 ACTCCAAAGGCCATACATACATACA 59.868 40.000 5.01 0.00 0.00 2.29
924 3425 6.183361 ACTCCAAAGGCCATACATACATACAT 60.183 38.462 5.01 0.00 0.00 2.29
967 3499 1.599047 CATCCGCACCTGACCTTCT 59.401 57.895 0.00 0.00 0.00 2.85
1164 3809 1.283321 GTCCCTTCTTCTCCCTTGCAT 59.717 52.381 0.00 0.00 0.00 3.96
1170 3817 0.394899 CTTCTCCCTTGCATCCACCC 60.395 60.000 0.00 0.00 0.00 4.61
1758 4701 3.712016 TGGTAGGCAGAGCAATTAACA 57.288 42.857 0.00 0.00 0.00 2.41
1973 4995 0.693049 GGGAGGTGAAGCTCTGGAAA 59.307 55.000 9.22 0.00 0.00 3.13
2042 5064 2.480416 GGTCACGCTCCTCTGTAATCTG 60.480 54.545 0.00 0.00 0.00 2.90
2062 5930 1.300465 CGGTGCCGGATGAGATGAG 60.300 63.158 5.05 0.00 35.56 2.90
2289 6160 7.484641 GCAATTACTAATTTCGAATGTGCTTCA 59.515 33.333 0.00 0.00 33.10 3.02
2299 6170 7.795431 TTCGAATGTGCTTCAATTTTGTATC 57.205 32.000 0.00 0.00 33.10 2.24
2419 6298 9.165035 CCACCGTTGATTTAAACCTATTAAGTA 57.835 33.333 0.00 0.00 0.00 2.24
2819 6706 1.630878 CTCCCTCCCTGCTGTTAGTTT 59.369 52.381 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.703798 ATGCCGGCAACATGCTCAC 61.704 57.895 36.33 0.00 44.28 3.51
3 4 2.361483 ATGCCGGCAACATGCTCA 60.361 55.556 36.33 6.47 44.28 4.26
4 5 2.103538 CATGCCGGCAACATGCTC 59.896 61.111 36.33 0.00 44.28 4.26
5 6 3.454573 CCATGCCGGCAACATGCT 61.455 61.111 36.33 13.75 44.28 3.79
6 7 4.517815 CCCATGCCGGCAACATGC 62.518 66.667 36.33 0.84 42.89 4.06
7 8 2.755064 TCCCATGCCGGCAACATG 60.755 61.111 36.33 26.84 43.67 3.21
8 9 1.920734 TAGTCCCATGCCGGCAACAT 61.921 55.000 36.33 15.60 0.00 2.71
9 10 2.597818 TAGTCCCATGCCGGCAACA 61.598 57.895 36.33 14.81 0.00 3.33
10 11 2.112815 GTAGTCCCATGCCGGCAAC 61.113 63.158 36.33 26.73 0.00 4.17
11 12 2.270850 GTAGTCCCATGCCGGCAA 59.729 61.111 36.33 15.14 0.00 4.52
12 13 2.687200 AGTAGTCCCATGCCGGCA 60.687 61.111 34.80 34.80 0.00 5.69
13 14 2.203070 CAGTAGTCCCATGCCGGC 60.203 66.667 22.73 22.73 0.00 6.13
14 15 2.032860 CTCCAGTAGTCCCATGCCGG 62.033 65.000 0.00 0.00 0.00 6.13
15 16 1.443407 CTCCAGTAGTCCCATGCCG 59.557 63.158 0.00 0.00 0.00 5.69
16 17 1.832912 CCTCCAGTAGTCCCATGCC 59.167 63.158 0.00 0.00 0.00 4.40
17 18 1.147153 GCCTCCAGTAGTCCCATGC 59.853 63.158 0.00 0.00 0.00 4.06
18 19 1.135094 ATGCCTCCAGTAGTCCCATG 58.865 55.000 0.00 0.00 0.00 3.66
19 20 1.135094 CATGCCTCCAGTAGTCCCAT 58.865 55.000 0.00 0.00 0.00 4.00
20 21 0.042581 TCATGCCTCCAGTAGTCCCA 59.957 55.000 0.00 0.00 0.00 4.37
21 22 1.071385 CATCATGCCTCCAGTAGTCCC 59.929 57.143 0.00 0.00 0.00 4.46
22 23 2.042464 TCATCATGCCTCCAGTAGTCC 58.958 52.381 0.00 0.00 0.00 3.85
23 24 4.040217 AGAATCATCATGCCTCCAGTAGTC 59.960 45.833 0.00 0.00 0.00 2.59
24 25 3.972638 AGAATCATCATGCCTCCAGTAGT 59.027 43.478 0.00 0.00 0.00 2.73
25 26 4.316645 CAGAATCATCATGCCTCCAGTAG 58.683 47.826 0.00 0.00 0.00 2.57
26 27 3.072038 CCAGAATCATCATGCCTCCAGTA 59.928 47.826 0.00 0.00 0.00 2.74
27 28 2.158652 CCAGAATCATCATGCCTCCAGT 60.159 50.000 0.00 0.00 0.00 4.00
28 29 2.105993 TCCAGAATCATCATGCCTCCAG 59.894 50.000 0.00 0.00 0.00 3.86
29 30 2.129363 TCCAGAATCATCATGCCTCCA 58.871 47.619 0.00 0.00 0.00 3.86
30 31 2.945080 TCCAGAATCATCATGCCTCC 57.055 50.000 0.00 0.00 0.00 4.30
31 32 6.236409 TCTTATTCCAGAATCATCATGCCTC 58.764 40.000 0.00 0.00 32.50 4.70
32 33 6.196918 TCTTATTCCAGAATCATCATGCCT 57.803 37.500 0.00 0.00 32.50 4.75
33 34 5.415077 CCTCTTATTCCAGAATCATCATGCC 59.585 44.000 0.00 0.00 32.50 4.40
34 35 6.149142 GTCCTCTTATTCCAGAATCATCATGC 59.851 42.308 0.00 0.00 32.50 4.06
35 36 6.654161 GGTCCTCTTATTCCAGAATCATCATG 59.346 42.308 0.00 0.00 32.50 3.07
36 37 6.331042 TGGTCCTCTTATTCCAGAATCATCAT 59.669 38.462 0.00 0.00 32.50 2.45
37 38 5.667172 TGGTCCTCTTATTCCAGAATCATCA 59.333 40.000 0.00 0.00 32.50 3.07
38 39 6.179906 TGGTCCTCTTATTCCAGAATCATC 57.820 41.667 0.00 0.00 32.50 2.92
39 40 6.776887 ATGGTCCTCTTATTCCAGAATCAT 57.223 37.500 0.00 0.00 33.33 2.45
40 41 6.581388 AATGGTCCTCTTATTCCAGAATCA 57.419 37.500 0.00 0.00 33.33 2.57
41 42 8.980481 TTTAATGGTCCTCTTATTCCAGAATC 57.020 34.615 0.00 0.00 33.33 2.52
42 43 9.942526 ATTTTAATGGTCCTCTTATTCCAGAAT 57.057 29.630 0.00 0.00 33.33 2.40
50 51 9.990868 AGTGGTTTATTTTAATGGTCCTCTTAT 57.009 29.630 0.00 0.00 0.00 1.73
51 52 9.457436 GAGTGGTTTATTTTAATGGTCCTCTTA 57.543 33.333 0.00 0.00 0.00 2.10
52 53 7.396339 GGAGTGGTTTATTTTAATGGTCCTCTT 59.604 37.037 0.00 0.00 0.00 2.85
53 54 6.890268 GGAGTGGTTTATTTTAATGGTCCTCT 59.110 38.462 0.00 0.00 0.00 3.69
54 55 6.096423 GGGAGTGGTTTATTTTAATGGTCCTC 59.904 42.308 0.00 0.00 0.00 3.71
55 56 5.955959 GGGAGTGGTTTATTTTAATGGTCCT 59.044 40.000 0.00 0.00 0.00 3.85
56 57 5.128171 GGGGAGTGGTTTATTTTAATGGTCC 59.872 44.000 0.00 0.00 0.00 4.46
57 58 5.717654 TGGGGAGTGGTTTATTTTAATGGTC 59.282 40.000 0.00 0.00 0.00 4.02
58 59 5.656420 TGGGGAGTGGTTTATTTTAATGGT 58.344 37.500 0.00 0.00 0.00 3.55
59 60 6.613153 TTGGGGAGTGGTTTATTTTAATGG 57.387 37.500 0.00 0.00 0.00 3.16
60 61 9.816354 CTAATTGGGGAGTGGTTTATTTTAATG 57.184 33.333 0.00 0.00 0.00 1.90
61 62 9.555411 ACTAATTGGGGAGTGGTTTATTTTAAT 57.445 29.630 0.00 0.00 0.00 1.40
62 63 8.959676 ACTAATTGGGGAGTGGTTTATTTTAA 57.040 30.769 0.00 0.00 0.00 1.52
64 65 8.959676 TTACTAATTGGGGAGTGGTTTATTTT 57.040 30.769 0.00 0.00 0.00 1.82
65 66 8.959676 TTTACTAATTGGGGAGTGGTTTATTT 57.040 30.769 0.00 0.00 0.00 1.40
66 67 8.959676 TTTTACTAATTGGGGAGTGGTTTATT 57.040 30.769 0.00 0.00 0.00 1.40
67 68 8.977412 CATTTTACTAATTGGGGAGTGGTTTAT 58.023 33.333 0.00 0.00 0.00 1.40
68 69 7.951245 ACATTTTACTAATTGGGGAGTGGTTTA 59.049 33.333 0.00 0.00 0.00 2.01
69 70 6.785466 ACATTTTACTAATTGGGGAGTGGTTT 59.215 34.615 0.00 0.00 0.00 3.27
70 71 6.319715 ACATTTTACTAATTGGGGAGTGGTT 58.680 36.000 0.00 0.00 0.00 3.67
71 72 5.899278 ACATTTTACTAATTGGGGAGTGGT 58.101 37.500 0.00 0.00 0.00 4.16
72 73 6.850752 AACATTTTACTAATTGGGGAGTGG 57.149 37.500 0.00 0.00 0.00 4.00
73 74 7.817478 GGAAAACATTTTACTAATTGGGGAGTG 59.183 37.037 0.00 0.00 0.00 3.51
74 75 7.511028 TGGAAAACATTTTACTAATTGGGGAGT 59.489 33.333 1.19 0.00 32.16 3.85
75 76 7.902087 TGGAAAACATTTTACTAATTGGGGAG 58.098 34.615 1.19 0.00 32.16 4.30
76 77 7.857404 TGGAAAACATTTTACTAATTGGGGA 57.143 32.000 1.19 0.00 32.16 4.81
91 92 5.339990 CGCCTATTTCGAAATGGAAAACAT 58.660 37.500 29.38 7.79 43.07 2.71
92 93 4.380023 CCGCCTATTTCGAAATGGAAAACA 60.380 41.667 29.38 10.68 39.19 2.83
93 94 4.102649 CCGCCTATTTCGAAATGGAAAAC 58.897 43.478 29.38 16.83 39.19 2.43
94 95 3.129638 CCCGCCTATTTCGAAATGGAAAA 59.870 43.478 29.38 11.98 39.19 2.29
95 96 2.685897 CCCGCCTATTTCGAAATGGAAA 59.314 45.455 29.38 12.31 39.96 3.13
96 97 2.294074 CCCGCCTATTTCGAAATGGAA 58.706 47.619 29.38 12.64 0.00 3.53
97 98 1.210967 ACCCGCCTATTTCGAAATGGA 59.789 47.619 29.38 13.30 0.00 3.41
98 99 1.333619 CACCCGCCTATTTCGAAATGG 59.666 52.381 29.20 26.10 0.00 3.16
99 100 2.014128 ACACCCGCCTATTTCGAAATG 58.986 47.619 29.20 19.28 0.00 2.32
100 101 2.413310 ACACCCGCCTATTTCGAAAT 57.587 45.000 25.48 25.48 0.00 2.17
101 102 2.234414 AGTACACCCGCCTATTTCGAAA 59.766 45.455 13.91 13.91 0.00 3.46
102 103 1.826720 AGTACACCCGCCTATTTCGAA 59.173 47.619 0.00 0.00 0.00 3.71
103 104 1.477553 AGTACACCCGCCTATTTCGA 58.522 50.000 0.00 0.00 0.00 3.71
104 105 3.655276 ATAGTACACCCGCCTATTTCG 57.345 47.619 0.00 0.00 0.00 3.46
105 106 5.924825 CACTTATAGTACACCCGCCTATTTC 59.075 44.000 0.00 0.00 0.00 2.17
106 107 5.364735 ACACTTATAGTACACCCGCCTATTT 59.635 40.000 0.00 0.00 0.00 1.40
107 108 4.897670 ACACTTATAGTACACCCGCCTATT 59.102 41.667 0.00 0.00 0.00 1.73
108 109 4.477249 ACACTTATAGTACACCCGCCTAT 58.523 43.478 0.00 0.00 0.00 2.57
109 110 3.902218 ACACTTATAGTACACCCGCCTA 58.098 45.455 0.00 0.00 0.00 3.93
110 111 2.743553 ACACTTATAGTACACCCGCCT 58.256 47.619 0.00 0.00 0.00 5.52
111 112 3.119029 TCAACACTTATAGTACACCCGCC 60.119 47.826 0.00 0.00 0.00 6.13
112 113 4.110482 CTCAACACTTATAGTACACCCGC 58.890 47.826 0.00 0.00 0.00 6.13
113 114 4.159135 ACCTCAACACTTATAGTACACCCG 59.841 45.833 0.00 0.00 0.00 5.28
114 115 5.672421 ACCTCAACACTTATAGTACACCC 57.328 43.478 0.00 0.00 0.00 4.61
115 116 6.932947 AGAACCTCAACACTTATAGTACACC 58.067 40.000 0.00 0.00 0.00 4.16
116 117 9.517609 CATAGAACCTCAACACTTATAGTACAC 57.482 37.037 0.00 0.00 0.00 2.90
117 118 8.692710 CCATAGAACCTCAACACTTATAGTACA 58.307 37.037 0.00 0.00 0.00 2.90
118 119 7.652507 GCCATAGAACCTCAACACTTATAGTAC 59.347 40.741 0.00 0.00 0.00 2.73
119 120 7.469594 CGCCATAGAACCTCAACACTTATAGTA 60.470 40.741 0.00 0.00 0.00 1.82
120 121 6.583562 GCCATAGAACCTCAACACTTATAGT 58.416 40.000 0.00 0.00 0.00 2.12
121 122 5.692204 CGCCATAGAACCTCAACACTTATAG 59.308 44.000 0.00 0.00 0.00 1.31
122 123 5.128171 ACGCCATAGAACCTCAACACTTATA 59.872 40.000 0.00 0.00 0.00 0.98
123 124 4.081087 ACGCCATAGAACCTCAACACTTAT 60.081 41.667 0.00 0.00 0.00 1.73
124 125 3.259876 ACGCCATAGAACCTCAACACTTA 59.740 43.478 0.00 0.00 0.00 2.24
125 126 2.038557 ACGCCATAGAACCTCAACACTT 59.961 45.455 0.00 0.00 0.00 3.16
126 127 1.623811 ACGCCATAGAACCTCAACACT 59.376 47.619 0.00 0.00 0.00 3.55
127 128 2.094762 ACGCCATAGAACCTCAACAC 57.905 50.000 0.00 0.00 0.00 3.32
128 129 2.851263 AACGCCATAGAACCTCAACA 57.149 45.000 0.00 0.00 0.00 3.33
129 130 3.500680 TCAAAACGCCATAGAACCTCAAC 59.499 43.478 0.00 0.00 0.00 3.18
130 131 3.745799 TCAAAACGCCATAGAACCTCAA 58.254 40.909 0.00 0.00 0.00 3.02
131 132 3.334691 CTCAAAACGCCATAGAACCTCA 58.665 45.455 0.00 0.00 0.00 3.86
132 133 2.096013 GCTCAAAACGCCATAGAACCTC 59.904 50.000 0.00 0.00 0.00 3.85
133 134 2.084546 GCTCAAAACGCCATAGAACCT 58.915 47.619 0.00 0.00 0.00 3.50
134 135 2.084546 AGCTCAAAACGCCATAGAACC 58.915 47.619 0.00 0.00 0.00 3.62
135 136 2.484264 ACAGCTCAAAACGCCATAGAAC 59.516 45.455 0.00 0.00 0.00 3.01
136 137 2.778299 ACAGCTCAAAACGCCATAGAA 58.222 42.857 0.00 0.00 0.00 2.10
137 138 2.472695 ACAGCTCAAAACGCCATAGA 57.527 45.000 0.00 0.00 0.00 1.98
138 139 2.226437 ACAACAGCTCAAAACGCCATAG 59.774 45.455 0.00 0.00 0.00 2.23
139 140 2.226330 ACAACAGCTCAAAACGCCATA 58.774 42.857 0.00 0.00 0.00 2.74
140 141 1.032014 ACAACAGCTCAAAACGCCAT 58.968 45.000 0.00 0.00 0.00 4.40
141 142 1.669604 TACAACAGCTCAAAACGCCA 58.330 45.000 0.00 0.00 0.00 5.69
142 143 2.223386 TGTTACAACAGCTCAAAACGCC 60.223 45.455 0.00 0.00 34.30 5.68
143 144 2.781646 GTGTTACAACAGCTCAAAACGC 59.218 45.455 0.00 0.00 40.05 4.84
153 154 3.945285 ACCAAAGTGAGGTGTTACAACAG 59.055 43.478 2.36 0.00 40.05 3.16
154 155 3.958018 ACCAAAGTGAGGTGTTACAACA 58.042 40.909 2.36 0.00 38.13 3.33
155 156 4.877251 TGTACCAAAGTGAGGTGTTACAAC 59.123 41.667 0.00 0.00 40.26 3.32
156 157 5.100344 TGTACCAAAGTGAGGTGTTACAA 57.900 39.130 0.00 0.00 40.26 2.41
157 158 4.757019 TGTACCAAAGTGAGGTGTTACA 57.243 40.909 0.00 0.00 40.26 2.41
158 159 5.302360 TGATGTACCAAAGTGAGGTGTTAC 58.698 41.667 0.00 0.00 40.26 2.50
159 160 5.554437 TGATGTACCAAAGTGAGGTGTTA 57.446 39.130 0.00 0.00 40.26 2.41
160 161 4.431416 TGATGTACCAAAGTGAGGTGTT 57.569 40.909 0.00 0.00 40.26 3.32
161 162 4.640771 ATGATGTACCAAAGTGAGGTGT 57.359 40.909 0.00 0.00 40.26 4.16
162 163 4.396166 GGAATGATGTACCAAAGTGAGGTG 59.604 45.833 0.00 0.00 40.26 4.00
163 164 4.289672 AGGAATGATGTACCAAAGTGAGGT 59.710 41.667 0.00 0.00 43.14 3.85
164 165 4.848357 AGGAATGATGTACCAAAGTGAGG 58.152 43.478 0.00 0.00 0.00 3.86
165 166 7.050377 ACATAGGAATGATGTACCAAAGTGAG 58.950 38.462 0.00 0.00 35.75 3.51
166 167 6.957631 ACATAGGAATGATGTACCAAAGTGA 58.042 36.000 0.00 0.00 35.75 3.41
167 168 8.204160 TCTACATAGGAATGATGTACCAAAGTG 58.796 37.037 0.00 0.00 38.47 3.16
168 169 8.319057 TCTACATAGGAATGATGTACCAAAGT 57.681 34.615 0.00 0.00 38.47 2.66
169 170 9.784531 ATTCTACATAGGAATGATGTACCAAAG 57.215 33.333 0.00 0.00 38.47 2.77
180 181 4.271696 TCGCCCATTCTACATAGGAATG 57.728 45.455 8.83 8.83 45.45 2.67
181 182 4.974645 TTCGCCCATTCTACATAGGAAT 57.025 40.909 0.00 0.00 34.21 3.01
182 183 4.504864 CCATTCGCCCATTCTACATAGGAA 60.505 45.833 0.00 0.00 0.00 3.36
183 184 3.007940 CCATTCGCCCATTCTACATAGGA 59.992 47.826 0.00 0.00 0.00 2.94
184 185 3.007940 TCCATTCGCCCATTCTACATAGG 59.992 47.826 0.00 0.00 0.00 2.57
185 186 4.248859 CTCCATTCGCCCATTCTACATAG 58.751 47.826 0.00 0.00 0.00 2.23
186 187 3.646162 ACTCCATTCGCCCATTCTACATA 59.354 43.478 0.00 0.00 0.00 2.29
187 188 2.439507 ACTCCATTCGCCCATTCTACAT 59.560 45.455 0.00 0.00 0.00 2.29
188 189 1.837439 ACTCCATTCGCCCATTCTACA 59.163 47.619 0.00 0.00 0.00 2.74
189 190 2.622064 ACTCCATTCGCCCATTCTAC 57.378 50.000 0.00 0.00 0.00 2.59
190 191 4.703897 CTTAACTCCATTCGCCCATTCTA 58.296 43.478 0.00 0.00 0.00 2.10
191 192 3.545703 CTTAACTCCATTCGCCCATTCT 58.454 45.455 0.00 0.00 0.00 2.40
192 193 2.033424 GCTTAACTCCATTCGCCCATTC 59.967 50.000 0.00 0.00 0.00 2.67
193 194 2.024414 GCTTAACTCCATTCGCCCATT 58.976 47.619 0.00 0.00 0.00 3.16
194 195 1.680338 GCTTAACTCCATTCGCCCAT 58.320 50.000 0.00 0.00 0.00 4.00
195 196 0.393808 GGCTTAACTCCATTCGCCCA 60.394 55.000 0.00 0.00 33.11 5.36
196 197 0.107165 AGGCTTAACTCCATTCGCCC 60.107 55.000 0.00 0.00 37.60 6.13
197 198 2.612672 GTTAGGCTTAACTCCATTCGCC 59.387 50.000 11.24 0.00 36.93 5.54
198 199 2.284417 CGTTAGGCTTAACTCCATTCGC 59.716 50.000 15.76 0.00 37.58 4.70
199 200 3.777478 TCGTTAGGCTTAACTCCATTCG 58.223 45.455 15.76 2.23 37.58 3.34
200 201 5.357257 TGATCGTTAGGCTTAACTCCATTC 58.643 41.667 15.76 6.70 37.58 2.67
201 202 5.353394 TGATCGTTAGGCTTAACTCCATT 57.647 39.130 15.76 0.00 37.58 3.16
202 203 5.353394 TTGATCGTTAGGCTTAACTCCAT 57.647 39.130 15.76 5.93 37.58 3.41
203 204 4.382685 CCTTGATCGTTAGGCTTAACTCCA 60.383 45.833 15.76 8.34 37.58 3.86
204 205 4.120589 CCTTGATCGTTAGGCTTAACTCC 58.879 47.826 15.76 6.16 37.58 3.85
205 206 4.120589 CCCTTGATCGTTAGGCTTAACTC 58.879 47.826 15.76 8.67 37.58 3.01
206 207 3.118371 CCCCTTGATCGTTAGGCTTAACT 60.118 47.826 15.76 0.00 37.58 2.24
207 208 3.203716 CCCCTTGATCGTTAGGCTTAAC 58.796 50.000 8.61 8.61 36.60 2.01
208 209 2.171870 CCCCCTTGATCGTTAGGCTTAA 59.828 50.000 0.00 0.00 0.00 1.85
209 210 1.766496 CCCCCTTGATCGTTAGGCTTA 59.234 52.381 0.00 0.00 0.00 3.09
210 211 0.546598 CCCCCTTGATCGTTAGGCTT 59.453 55.000 0.00 0.00 0.00 4.35
211 212 0.326238 TCCCCCTTGATCGTTAGGCT 60.326 55.000 0.00 0.00 0.00 4.58
212 213 0.106894 CTCCCCCTTGATCGTTAGGC 59.893 60.000 3.45 0.00 0.00 3.93
213 214 1.789523 TCTCCCCCTTGATCGTTAGG 58.210 55.000 2.23 2.23 0.00 2.69
214 215 3.134804 ACATTCTCCCCCTTGATCGTTAG 59.865 47.826 0.00 0.00 0.00 2.34
215 216 3.112263 ACATTCTCCCCCTTGATCGTTA 58.888 45.455 0.00 0.00 0.00 3.18
216 217 1.916181 ACATTCTCCCCCTTGATCGTT 59.084 47.619 0.00 0.00 0.00 3.85
217 218 1.584724 ACATTCTCCCCCTTGATCGT 58.415 50.000 0.00 0.00 0.00 3.73
218 219 2.292267 CAACATTCTCCCCCTTGATCG 58.708 52.381 0.00 0.00 0.00 3.69
219 220 2.024941 ACCAACATTCTCCCCCTTGATC 60.025 50.000 0.00 0.00 0.00 2.92
220 221 2.003072 ACCAACATTCTCCCCCTTGAT 58.997 47.619 0.00 0.00 0.00 2.57
221 222 1.455822 ACCAACATTCTCCCCCTTGA 58.544 50.000 0.00 0.00 0.00 3.02
222 223 2.309136 AACCAACATTCTCCCCCTTG 57.691 50.000 0.00 0.00 0.00 3.61
223 224 2.972021 CAAAACCAACATTCTCCCCCTT 59.028 45.455 0.00 0.00 0.00 3.95
224 225 2.178984 TCAAAACCAACATTCTCCCCCT 59.821 45.455 0.00 0.00 0.00 4.79
225 226 2.604139 TCAAAACCAACATTCTCCCCC 58.396 47.619 0.00 0.00 0.00 5.40
226 227 4.082026 CAGATCAAAACCAACATTCTCCCC 60.082 45.833 0.00 0.00 0.00 4.81
227 228 4.766891 TCAGATCAAAACCAACATTCTCCC 59.233 41.667 0.00 0.00 0.00 4.30
228 229 5.617751 CGTCAGATCAAAACCAACATTCTCC 60.618 44.000 0.00 0.00 0.00 3.71
229 230 5.385617 CGTCAGATCAAAACCAACATTCTC 58.614 41.667 0.00 0.00 0.00 2.87
230 231 4.216257 CCGTCAGATCAAAACCAACATTCT 59.784 41.667 0.00 0.00 0.00 2.40
231 232 4.475944 CCGTCAGATCAAAACCAACATTC 58.524 43.478 0.00 0.00 0.00 2.67
232 233 3.305335 GCCGTCAGATCAAAACCAACATT 60.305 43.478 0.00 0.00 0.00 2.71
233 234 2.228822 GCCGTCAGATCAAAACCAACAT 59.771 45.455 0.00 0.00 0.00 2.71
234 235 1.606668 GCCGTCAGATCAAAACCAACA 59.393 47.619 0.00 0.00 0.00 3.33
235 236 1.880027 AGCCGTCAGATCAAAACCAAC 59.120 47.619 0.00 0.00 0.00 3.77
236 237 2.270352 AGCCGTCAGATCAAAACCAA 57.730 45.000 0.00 0.00 0.00 3.67
237 238 2.270352 AAGCCGTCAGATCAAAACCA 57.730 45.000 0.00 0.00 0.00 3.67
238 239 4.023536 TGTTTAAGCCGTCAGATCAAAACC 60.024 41.667 0.00 0.00 0.00 3.27
239 240 5.103290 TGTTTAAGCCGTCAGATCAAAAC 57.897 39.130 0.00 0.00 0.00 2.43
240 241 4.215399 CCTGTTTAAGCCGTCAGATCAAAA 59.785 41.667 0.00 0.00 0.00 2.44
241 242 3.751175 CCTGTTTAAGCCGTCAGATCAAA 59.249 43.478 0.00 0.00 0.00 2.69
242 243 3.334691 CCTGTTTAAGCCGTCAGATCAA 58.665 45.455 0.00 0.00 0.00 2.57
243 244 2.935238 GCCTGTTTAAGCCGTCAGATCA 60.935 50.000 0.00 0.00 0.00 2.92
244 245 1.666189 GCCTGTTTAAGCCGTCAGATC 59.334 52.381 0.00 0.00 0.00 2.75
245 246 1.003118 TGCCTGTTTAAGCCGTCAGAT 59.997 47.619 0.00 0.00 0.00 2.90
246 247 0.394938 TGCCTGTTTAAGCCGTCAGA 59.605 50.000 0.00 0.00 0.00 3.27
247 248 0.798776 CTGCCTGTTTAAGCCGTCAG 59.201 55.000 0.00 0.00 0.00 3.51
248 249 0.107831 ACTGCCTGTTTAAGCCGTCA 59.892 50.000 0.00 0.00 0.00 4.35
249 250 1.235724 AACTGCCTGTTTAAGCCGTC 58.764 50.000 0.00 0.00 34.84 4.79
250 251 2.038033 TCTAACTGCCTGTTTAAGCCGT 59.962 45.455 0.00 0.00 39.89 5.68
251 252 2.695359 TCTAACTGCCTGTTTAAGCCG 58.305 47.619 0.00 0.00 39.89 5.52
252 253 4.518249 AGATCTAACTGCCTGTTTAAGCC 58.482 43.478 0.00 0.00 39.89 4.35
253 254 7.793927 AATAGATCTAACTGCCTGTTTAAGC 57.206 36.000 6.52 0.00 39.89 3.09
256 257 9.422681 AGACTAATAGATCTAACTGCCTGTTTA 57.577 33.333 6.52 0.00 39.89 2.01
257 258 8.312669 AGACTAATAGATCTAACTGCCTGTTT 57.687 34.615 6.52 0.00 39.89 2.83
258 259 7.906199 AGACTAATAGATCTAACTGCCTGTT 57.094 36.000 6.52 0.00 42.31 3.16
259 260 8.998277 TTAGACTAATAGATCTAACTGCCTGT 57.002 34.615 6.52 0.00 33.47 4.00
283 284 9.135189 TCGTACATAGTAGGTGGTATTATTGTT 57.865 33.333 0.00 0.00 0.00 2.83
284 285 8.571336 GTCGTACATAGTAGGTGGTATTATTGT 58.429 37.037 0.00 0.00 0.00 2.71
285 286 8.790718 AGTCGTACATAGTAGGTGGTATTATTG 58.209 37.037 0.00 0.00 0.00 1.90
309 310 9.618890 AGCATTTAATACTGTATTGACATCAGT 57.381 29.630 20.42 11.31 43.46 3.41
312 313 9.669353 CCAAGCATTTAATACTGTATTGACATC 57.331 33.333 20.42 8.80 34.24 3.06
316 317 7.479980 GTGCCAAGCATTTAATACTGTATTGA 58.520 34.615 20.42 11.43 41.91 2.57
324 325 7.043656 GGAAATTACGTGCCAAGCATTTAATAC 60.044 37.037 0.00 0.00 41.91 1.89
329 330 3.584834 GGAAATTACGTGCCAAGCATTT 58.415 40.909 0.00 0.00 41.91 2.32
331 332 1.476488 GGGAAATTACGTGCCAAGCAT 59.524 47.619 0.00 0.00 41.91 3.79
348 349 9.225682 GGGATATATAGACATAGGAAAATGGGA 57.774 37.037 0.00 0.00 0.00 4.37
349 350 8.440771 GGGGATATATAGACATAGGAAAATGGG 58.559 40.741 0.00 0.00 0.00 4.00
350 351 9.003145 TGGGGATATATAGACATAGGAAAATGG 57.997 37.037 0.00 0.00 0.00 3.16
385 387 1.531149 GCATGCTTGGACGCGTTATAT 59.469 47.619 15.53 0.00 0.00 0.86
391 393 4.824166 GCTGCATGCTTGGACGCG 62.824 66.667 20.33 3.53 38.95 6.01
400 402 0.245539 ATTGTTCTGGTGCTGCATGC 59.754 50.000 11.82 11.82 43.25 4.06
407 409 6.016276 TCTCCTTTTTCTTATTGTTCTGGTGC 60.016 38.462 0.00 0.00 0.00 5.01
410 412 6.942576 TCCTCTCCTTTTTCTTATTGTTCTGG 59.057 38.462 0.00 0.00 0.00 3.86
412 414 7.978925 TCTCCTCTCCTTTTTCTTATTGTTCT 58.021 34.615 0.00 0.00 0.00 3.01
413 415 8.622948 TTCTCCTCTCCTTTTTCTTATTGTTC 57.377 34.615 0.00 0.00 0.00 3.18
433 2928 8.608844 TTTCTCTAATTGTGTTTCTCTTCTCC 57.391 34.615 0.00 0.00 0.00 3.71
464 2959 8.200120 TCGTCTCTCTTATTGTGATCATCAAAT 58.800 33.333 12.60 9.53 0.00 2.32
465 2960 7.547227 TCGTCTCTCTTATTGTGATCATCAAA 58.453 34.615 12.60 3.58 0.00 2.69
466 2961 7.067494 TCTCGTCTCTCTTATTGTGATCATCAA 59.933 37.037 0.00 5.95 0.00 2.57
467 2962 6.543831 TCTCGTCTCTCTTATTGTGATCATCA 59.456 38.462 0.00 0.00 0.00 3.07
468 2963 6.855914 GTCTCGTCTCTCTTATTGTGATCATC 59.144 42.308 0.00 0.00 0.00 2.92
469 2964 6.545666 AGTCTCGTCTCTCTTATTGTGATCAT 59.454 38.462 0.00 0.00 0.00 2.45
470 2965 5.883115 AGTCTCGTCTCTCTTATTGTGATCA 59.117 40.000 0.00 0.00 0.00 2.92
471 2966 6.037720 TGAGTCTCGTCTCTCTTATTGTGATC 59.962 42.308 0.00 0.00 35.68 2.92
472 2967 5.883115 TGAGTCTCGTCTCTCTTATTGTGAT 59.117 40.000 0.00 0.00 35.68 3.06
473 2968 5.122554 GTGAGTCTCGTCTCTCTTATTGTGA 59.877 44.000 0.00 0.00 35.68 3.58
476 2971 5.553290 TGTGAGTCTCGTCTCTCTTATTG 57.447 43.478 0.00 0.00 35.68 1.90
477 2972 5.883115 TGATGTGAGTCTCGTCTCTCTTATT 59.117 40.000 13.93 0.00 35.68 1.40
478 2973 5.295787 GTGATGTGAGTCTCGTCTCTCTTAT 59.704 44.000 13.93 0.00 35.68 1.73
479 2974 4.632251 GTGATGTGAGTCTCGTCTCTCTTA 59.368 45.833 13.93 0.00 35.68 2.10
480 2975 3.438781 GTGATGTGAGTCTCGTCTCTCTT 59.561 47.826 13.93 0.00 35.68 2.85
493 2988 4.253685 ACGGAAACATTAGGTGATGTGAG 58.746 43.478 0.00 0.00 40.03 3.51
497 2992 4.695455 AGACAACGGAAACATTAGGTGATG 59.305 41.667 0.00 0.00 0.00 3.07
498 2993 4.906618 AGACAACGGAAACATTAGGTGAT 58.093 39.130 0.00 0.00 0.00 3.06
504 2999 7.504924 AGAAATGAAGACAACGGAAACATTA 57.495 32.000 0.00 0.00 0.00 1.90
514 3009 6.150140 AGCTACCATGAAGAAATGAAGACAAC 59.850 38.462 0.00 0.00 0.00 3.32
527 3023 4.103153 TCCCATCCTTAAGCTACCATGAAG 59.897 45.833 0.00 0.00 0.00 3.02
533 3029 1.072489 GCCTCCCATCCTTAAGCTACC 59.928 57.143 0.00 0.00 0.00 3.18
534 3030 1.768870 TGCCTCCCATCCTTAAGCTAC 59.231 52.381 0.00 0.00 0.00 3.58
564 3060 3.872459 AGGATGATGGTGGAGAAATCC 57.128 47.619 0.00 0.00 34.94 3.01
589 3085 5.223449 TGAGGAAACCACGATTTAGTCTT 57.777 39.130 0.00 0.00 0.00 3.01
590 3086 4.884668 TGAGGAAACCACGATTTAGTCT 57.115 40.909 0.00 0.00 0.00 3.24
599 3095 3.119495 GGGAATTCAATGAGGAAACCACG 60.119 47.826 7.93 0.00 32.62 4.94
607 3103 5.594926 GCATTGTTAGGGAATTCAATGAGG 58.405 41.667 15.65 0.00 45.40 3.86
613 3109 2.752354 CACCGCATTGTTAGGGAATTCA 59.248 45.455 7.93 0.00 0.00 2.57
616 3112 2.491693 CAACACCGCATTGTTAGGGAAT 59.508 45.455 0.00 0.00 37.62 3.01
624 3120 0.597568 CATCACCAACACCGCATTGT 59.402 50.000 0.00 0.00 0.00 2.71
631 3127 1.981256 ACAACTCCATCACCAACACC 58.019 50.000 0.00 0.00 0.00 4.16
645 3141 0.535102 CAGCGAACCCAGGAACAACT 60.535 55.000 0.00 0.00 0.00 3.16
656 3152 1.429148 CTCGGTTATGCCAGCGAACC 61.429 60.000 13.59 13.59 45.44 3.62
658 3154 0.818938 TACTCGGTTATGCCAGCGAA 59.181 50.000 3.92 0.00 45.44 4.70
662 3158 3.735237 AGTGATACTCGGTTATGCCAG 57.265 47.619 0.00 0.00 36.97 4.85
663 3159 5.417894 CCTATAGTGATACTCGGTTATGCCA 59.582 44.000 0.00 0.00 36.97 4.92
664 3160 5.418209 ACCTATAGTGATACTCGGTTATGCC 59.582 44.000 0.00 0.00 0.00 4.40
665 3161 6.374894 AGACCTATAGTGATACTCGGTTATGC 59.625 42.308 0.00 0.00 0.00 3.14
667 3163 8.162085 TGAAGACCTATAGTGATACTCGGTTAT 58.838 37.037 0.00 0.00 0.00 1.89
668 3164 7.443575 GTGAAGACCTATAGTGATACTCGGTTA 59.556 40.741 0.00 0.00 0.00 2.85
669 3165 6.262720 GTGAAGACCTATAGTGATACTCGGTT 59.737 42.308 0.00 0.00 0.00 4.44
671 3167 5.998981 AGTGAAGACCTATAGTGATACTCGG 59.001 44.000 0.00 0.00 0.00 4.63
672 3168 7.332430 CCTAGTGAAGACCTATAGTGATACTCG 59.668 44.444 0.00 0.00 0.00 4.18
678 3174 4.135306 CGCCTAGTGAAGACCTATAGTGA 58.865 47.826 0.00 0.00 0.00 3.41
679 3175 3.884091 ACGCCTAGTGAAGACCTATAGTG 59.116 47.826 0.00 0.00 0.00 2.74
680 3176 4.167652 ACGCCTAGTGAAGACCTATAGT 57.832 45.455 0.00 0.00 0.00 2.12
681 3177 4.338682 ACAACGCCTAGTGAAGACCTATAG 59.661 45.833 0.00 0.00 0.00 1.31
682 3178 4.097437 CACAACGCCTAGTGAAGACCTATA 59.903 45.833 0.00 0.00 37.97 1.31
683 3179 3.097614 ACAACGCCTAGTGAAGACCTAT 58.902 45.455 0.00 0.00 0.00 2.57
684 3180 2.230508 CACAACGCCTAGTGAAGACCTA 59.769 50.000 0.00 0.00 37.97 3.08
685 3181 1.000955 CACAACGCCTAGTGAAGACCT 59.999 52.381 0.00 0.00 37.97 3.85
686 3182 1.270147 ACACAACGCCTAGTGAAGACC 60.270 52.381 0.00 0.00 39.03 3.85
687 3183 1.792949 CACACAACGCCTAGTGAAGAC 59.207 52.381 0.00 0.00 39.03 3.01
688 3184 1.684450 TCACACAACGCCTAGTGAAGA 59.316 47.619 0.00 0.00 37.99 2.87
689 3185 2.061773 CTCACACAACGCCTAGTGAAG 58.938 52.381 0.00 0.00 40.14 3.02
690 3186 1.411246 ACTCACACAACGCCTAGTGAA 59.589 47.619 0.00 0.00 40.14 3.18
716 3212 3.120199 GCACATAGTCACAACATCACACC 60.120 47.826 0.00 0.00 0.00 4.16
725 3221 0.598942 ACGCACGCACATAGTCACAA 60.599 50.000 0.00 0.00 0.00 3.33
731 3227 0.365523 GTACACACGCACGCACATAG 59.634 55.000 0.00 0.00 0.00 2.23
732 3228 0.038983 AGTACACACGCACGCACATA 60.039 50.000 0.00 0.00 0.00 2.29
733 3229 0.878523 AAGTACACACGCACGCACAT 60.879 50.000 0.00 0.00 0.00 3.21
734 3230 1.519676 AAGTACACACGCACGCACA 60.520 52.632 0.00 0.00 0.00 4.57
738 3234 2.222202 CGAATACAAGTACACACGCACG 60.222 50.000 0.00 0.00 0.00 5.34
758 3254 5.274823 GCGCGAAATTTTTCTAGAAACATCG 60.275 40.000 17.51 21.25 35.13 3.84
769 3265 5.392297 CCTTTTTCTTTGCGCGAAATTTTTC 59.608 36.000 12.10 0.00 31.17 2.29
775 3271 1.135333 ACCCTTTTTCTTTGCGCGAAA 59.865 42.857 12.10 0.74 0.00 3.46
777 3273 0.309612 GACCCTTTTTCTTTGCGCGA 59.690 50.000 12.10 0.00 0.00 5.87
778 3274 0.310854 AGACCCTTTTTCTTTGCGCG 59.689 50.000 0.00 0.00 0.00 6.86
779 3275 1.602920 CCAGACCCTTTTTCTTTGCGC 60.603 52.381 0.00 0.00 0.00 6.09
780 3276 1.953686 TCCAGACCCTTTTTCTTTGCG 59.046 47.619 0.00 0.00 0.00 4.85
782 3278 6.220726 TCTTTTCCAGACCCTTTTTCTTTG 57.779 37.500 0.00 0.00 0.00 2.77
783 3279 8.547481 TTATCTTTTCCAGACCCTTTTTCTTT 57.453 30.769 0.00 0.00 32.83 2.52
786 3282 9.778741 AATTTTATCTTTTCCAGACCCTTTTTC 57.221 29.630 0.00 0.00 32.83 2.29
787 3283 9.778741 GAATTTTATCTTTTCCAGACCCTTTTT 57.221 29.630 0.00 0.00 32.83 1.94
788 3284 9.159254 AGAATTTTATCTTTTCCAGACCCTTTT 57.841 29.630 0.00 0.00 32.83 2.27
789 3285 8.727100 AGAATTTTATCTTTTCCAGACCCTTT 57.273 30.769 0.00 0.00 32.83 3.11
791 3287 6.892456 GGAGAATTTTATCTTTTCCAGACCCT 59.108 38.462 0.00 0.00 32.83 4.34
792 3288 6.663523 TGGAGAATTTTATCTTTTCCAGACCC 59.336 38.462 0.00 0.00 32.83 4.46
793 3289 7.703058 TGGAGAATTTTATCTTTTCCAGACC 57.297 36.000 0.00 0.00 32.83 3.85
794 3290 9.981114 TTTTGGAGAATTTTATCTTTTCCAGAC 57.019 29.630 0.00 0.00 32.83 3.51
808 3304 9.435688 CGGGAGAATTTTATTTTTGGAGAATTT 57.564 29.630 0.00 0.00 0.00 1.82
809 3305 8.040727 CCGGGAGAATTTTATTTTTGGAGAATT 58.959 33.333 0.00 0.00 0.00 2.17
810 3306 7.180229 ACCGGGAGAATTTTATTTTTGGAGAAT 59.820 33.333 6.32 0.00 0.00 2.40
811 3307 6.495526 ACCGGGAGAATTTTATTTTTGGAGAA 59.504 34.615 6.32 0.00 0.00 2.87
812 3308 6.014012 ACCGGGAGAATTTTATTTTTGGAGA 58.986 36.000 6.32 0.00 0.00 3.71
813 3309 6.152831 AGACCGGGAGAATTTTATTTTTGGAG 59.847 38.462 6.32 0.00 0.00 3.86
814 3310 6.014012 AGACCGGGAGAATTTTATTTTTGGA 58.986 36.000 6.32 0.00 0.00 3.53
815 3311 6.280855 AGACCGGGAGAATTTTATTTTTGG 57.719 37.500 6.32 0.00 0.00 3.28
816 3312 7.375053 TCAAGACCGGGAGAATTTTATTTTTG 58.625 34.615 6.32 0.00 0.00 2.44
817 3313 7.533289 TCAAGACCGGGAGAATTTTATTTTT 57.467 32.000 6.32 0.00 0.00 1.94
818 3314 7.396055 TGATCAAGACCGGGAGAATTTTATTTT 59.604 33.333 6.32 0.00 0.00 1.82
819 3315 6.889722 TGATCAAGACCGGGAGAATTTTATTT 59.110 34.615 6.32 0.00 0.00 1.40
820 3316 6.423182 TGATCAAGACCGGGAGAATTTTATT 58.577 36.000 6.32 0.00 0.00 1.40
821 3317 6.001449 TGATCAAGACCGGGAGAATTTTAT 57.999 37.500 6.32 0.00 0.00 1.40
822 3318 5.429681 TGATCAAGACCGGGAGAATTTTA 57.570 39.130 6.32 0.00 0.00 1.52
823 3319 4.301072 TGATCAAGACCGGGAGAATTTT 57.699 40.909 6.32 0.00 0.00 1.82
824 3320 4.202441 CATGATCAAGACCGGGAGAATTT 58.798 43.478 6.32 0.00 0.00 1.82
894 3395 1.132453 GTATGGCCTTTGGAGTTTCGC 59.868 52.381 3.32 0.00 0.00 4.70
895 3396 2.432444 TGTATGGCCTTTGGAGTTTCG 58.568 47.619 3.32 0.00 0.00 3.46
896 3397 4.947388 TGTATGTATGGCCTTTGGAGTTTC 59.053 41.667 3.32 0.00 0.00 2.78
897 3398 4.929479 TGTATGTATGGCCTTTGGAGTTT 58.071 39.130 3.32 0.00 0.00 2.66
898 3399 4.584638 TGTATGTATGGCCTTTGGAGTT 57.415 40.909 3.32 0.00 0.00 3.01
899 3400 4.796110 ATGTATGTATGGCCTTTGGAGT 57.204 40.909 3.32 0.00 0.00 3.85
900 3401 5.620206 TGTATGTATGTATGGCCTTTGGAG 58.380 41.667 3.32 0.00 0.00 3.86
913 3414 2.792674 GTGCGCGTGTATGTATGTATGT 59.207 45.455 8.43 0.00 0.00 2.29
920 3421 2.126424 TGCGTGCGCGTGTATGTA 60.126 55.556 22.18 0.24 45.51 2.29
921 3422 3.773630 GTGCGTGCGCGTGTATGT 61.774 61.111 22.18 0.00 45.51 2.29
922 3423 3.772560 TGTGCGTGCGCGTGTATG 61.773 61.111 22.18 1.51 45.51 2.39
923 3424 3.773630 GTGTGCGTGCGCGTGTAT 61.774 61.111 22.18 0.00 45.51 2.29
951 3483 2.283529 GGAGAAGGTCAGGTGCGGA 61.284 63.158 0.00 0.00 0.00 5.54
960 3492 2.783288 CGCGGTAGGGGAGAAGGTC 61.783 68.421 0.00 0.00 0.00 3.85
961 3493 2.758737 CGCGGTAGGGGAGAAGGT 60.759 66.667 0.00 0.00 0.00 3.50
1148 3793 2.363683 GTGGATGCAAGGGAGAAGAAG 58.636 52.381 0.00 0.00 0.00 2.85
1164 3809 2.608368 CGGGGTTAGGTGGGTGGA 60.608 66.667 0.00 0.00 0.00 4.02
1170 3817 4.419921 GGTGGCCGGGGTTAGGTG 62.420 72.222 2.18 0.00 0.00 4.00
1217 3885 4.518217 CTTCTTTCAGTACACACGCAAAG 58.482 43.478 0.00 0.00 0.00 2.77
1758 4701 2.650322 CGGGTTGTTTATACCAGCCAT 58.350 47.619 6.47 0.00 37.41 4.40
2324 6195 7.332557 TCCACAATCACCGTAAAACTACATAT 58.667 34.615 0.00 0.00 0.00 1.78
2325 6196 6.699366 TCCACAATCACCGTAAAACTACATA 58.301 36.000 0.00 0.00 0.00 2.29
2326 6197 5.553123 TCCACAATCACCGTAAAACTACAT 58.447 37.500 0.00 0.00 0.00 2.29
2327 6198 4.958509 TCCACAATCACCGTAAAACTACA 58.041 39.130 0.00 0.00 0.00 2.74
2328 6199 4.992951 ACTCCACAATCACCGTAAAACTAC 59.007 41.667 0.00 0.00 0.00 2.73
2329 6200 5.217978 ACTCCACAATCACCGTAAAACTA 57.782 39.130 0.00 0.00 0.00 2.24
2330 6201 4.081322 ACTCCACAATCACCGTAAAACT 57.919 40.909 0.00 0.00 0.00 2.66
2331 6202 4.823790 AACTCCACAATCACCGTAAAAC 57.176 40.909 0.00 0.00 0.00 2.43
3027 7014 1.067821 CATCCTAGCCAAGACTCCGAC 59.932 57.143 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.