Multiple sequence alignment - TraesCS4A01G278500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G278500 chr4A 100.000 7027 0 0 1 7027 586437984 586430958 0.000000e+00 12977.0
1 TraesCS4A01G278500 chr4A 86.393 463 53 2 186 647 586426848 586426395 1.360000e-136 497.0
2 TraesCS4A01G278500 chr4A 85.129 464 57 4 186 647 538169047 538169500 1.380000e-126 464.0
3 TraesCS4A01G278500 chr4A 95.420 262 11 1 4237 4497 212811753 212812014 3.920000e-112 416.0
4 TraesCS4A01G278500 chr4A 87.649 251 26 5 6183 6431 538487485 538487732 3.210000e-73 287.0
5 TraesCS4A01G278500 chr4A 88.485 165 18 1 6269 6432 585693617 585693453 1.550000e-46 198.0
6 TraesCS4A01G278500 chr4A 80.667 150 24 5 1462 1607 538169695 538169843 2.070000e-20 111.0
7 TraesCS4A01G278500 chr4A 95.588 68 1 2 6785 6851 586431145 586431079 2.680000e-19 108.0
8 TraesCS4A01G278500 chr4A 95.588 68 1 2 6840 6906 586431200 586431134 2.680000e-19 108.0
9 TraesCS4A01G278500 chr4B 92.927 3563 162 32 730 4243 25270486 25274007 0.000000e+00 5101.0
10 TraesCS4A01G278500 chr4B 92.713 988 55 7 5202 6186 25274559 25275532 0.000000e+00 1410.0
11 TraesCS4A01G278500 chr4B 91.519 1014 44 15 5202 6186 24834653 24833653 0.000000e+00 1358.0
12 TraesCS4A01G278500 chr4B 87.425 1161 88 27 1182 2327 24838567 24837450 0.000000e+00 1282.0
13 TraesCS4A01G278500 chr4B 89.659 822 53 17 3426 4240 24836111 24835315 0.000000e+00 1018.0
14 TraesCS4A01G278500 chr4B 90.859 733 31 5 1 728 25269732 25270433 0.000000e+00 950.0
15 TraesCS4A01G278500 chr4B 96.454 564 14 4 4493 5052 25273998 25274559 0.000000e+00 926.0
16 TraesCS4A01G278500 chr4B 91.800 561 37 4 4493 5047 24835320 24834763 0.000000e+00 773.0
17 TraesCS4A01G278500 chr4B 87.111 450 40 12 2641 3077 24836611 24836167 1.760000e-135 494.0
18 TraesCS4A01G278500 chr4B 89.161 286 26 3 1 283 24851354 24851071 1.120000e-92 351.0
19 TraesCS4A01G278500 chr4B 86.380 279 28 3 2333 2602 24836984 24836707 5.330000e-76 296.0
20 TraesCS4A01G278500 chr4B 97.403 154 4 0 281 434 24838750 24838597 5.410000e-66 263.0
21 TraesCS4A01G278500 chr4B 89.815 108 6 3 1053 1155 25987455 25987348 4.420000e-27 134.0
22 TraesCS4A01G278500 chr4B 89.815 108 6 3 1053 1155 26027768 26027661 4.420000e-27 134.0
23 TraesCS4A01G278500 chr4B 89.815 108 6 3 1053 1155 26079681 26079574 4.420000e-27 134.0
24 TraesCS4A01G278500 chr4B 89.815 108 6 3 1053 1155 26116057 26115950 4.420000e-27 134.0
25 TraesCS4A01G278500 chr4B 89.815 108 6 3 1053 1155 26207596 26207489 4.420000e-27 134.0
26 TraesCS4A01G278500 chr4B 89.815 108 6 3 1053 1155 26247461 26247354 4.420000e-27 134.0
27 TraesCS4A01G278500 chr4D 91.431 2124 131 27 730 2827 14991012 14993110 0.000000e+00 2867.0
28 TraesCS4A01G278500 chr4D 96.218 1428 32 5 2823 4240 14994797 14996212 0.000000e+00 2318.0
29 TraesCS4A01G278500 chr4D 87.355 1376 69 37 5202 6507 14996769 14998109 0.000000e+00 1480.0
30 TraesCS4A01G278500 chr4D 93.440 747 42 7 1 741 14990228 14990973 0.000000e+00 1101.0
31 TraesCS4A01G278500 chr4D 92.416 567 32 7 4493 5052 14996207 14996769 0.000000e+00 798.0
32 TraesCS4A01G278500 chr4D 85.913 575 62 10 177 741 14999536 15000101 4.690000e-166 595.0
33 TraesCS4A01G278500 chr4D 86.571 417 41 14 1903 2314 448186444 448186038 5.000000e-121 446.0
34 TraesCS4A01G278500 chr4D 87.050 278 21 5 2334 2602 448185381 448185110 4.120000e-77 300.0
35 TraesCS4A01G278500 chr4D 88.757 169 19 0 6269 6437 14398923 14399091 2.570000e-49 207.0
36 TraesCS4A01G278500 chr4D 87.640 178 19 2 1692 1869 448186620 448186446 3.320000e-48 204.0
37 TraesCS4A01G278500 chr4D 91.566 83 4 2 6523 6604 14998192 14998272 2.070000e-20 111.0
38 TraesCS4A01G278500 chr3B 88.520 1655 93 27 730 2327 452549097 452550711 0.000000e+00 1914.0
39 TraesCS4A01G278500 chr3B 92.300 987 54 9 5202 6183 452553994 452554963 0.000000e+00 1382.0
40 TraesCS4A01G278500 chr3B 93.382 680 40 3 3565 4240 452552759 452553437 0.000000e+00 1002.0
41 TraesCS4A01G278500 chr3B 91.906 593 38 4 1 585 452548365 452548955 0.000000e+00 821.0
42 TraesCS4A01G278500 chr3B 92.756 566 32 4 4493 5052 452553432 452553994 0.000000e+00 809.0
43 TraesCS4A01G278500 chr3B 85.021 701 73 19 2641 3316 452551939 452552632 0.000000e+00 684.0
44 TraesCS4A01G278500 chr3B 86.380 279 28 3 2333 2602 452551566 452551843 5.330000e-76 296.0
45 TraesCS4A01G278500 chr3B 100.000 46 0 0 603 648 452548954 452548999 1.260000e-12 86.1
46 TraesCS4A01G278500 chr1A 86.158 419 43 13 1903 2314 462127878 462128288 8.370000e-119 438.0
47 TraesCS4A01G278500 chr1A 86.466 266 20 7 2334 2590 462129012 462129270 1.930000e-70 278.0
48 TraesCS4A01G278500 chr1A 91.573 178 15 0 1692 1869 462127699 462127876 5.440000e-61 246.0
49 TraesCS4A01G278500 chr6A 96.198 263 9 1 4235 4496 586802509 586802247 5.040000e-116 429.0
50 TraesCS4A01G278500 chr6A 95.455 264 11 1 4236 4498 13387535 13387272 3.030000e-113 420.0
51 TraesCS4A01G278500 chr6B 85.919 419 38 17 1904 2314 88721210 88720805 1.810000e-115 427.0
52 TraesCS4A01G278500 chr6B 89.326 178 18 1 1692 1869 88721389 88721213 9.170000e-54 222.0
53 TraesCS4A01G278500 chr6B 88.095 126 14 1 2421 2546 88719806 88719682 1.580000e-31 148.0
54 TraesCS4A01G278500 chr6B 90.196 102 7 2 6504 6604 705934560 705934659 5.720000e-26 130.0
55 TraesCS4A01G278500 chr7A 95.833 264 9 2 4235 4497 559187101 559187363 6.510000e-115 425.0
56 TraesCS4A01G278500 chr7A 95.817 263 10 1 4235 4496 232743803 232744065 2.340000e-114 424.0
57 TraesCS4A01G278500 chr7A 95.437 263 11 1 4237 4498 669666357 669666619 1.090000e-112 418.0
58 TraesCS4A01G278500 chr7A 94.737 266 13 1 4232 4496 679063941 679064206 5.070000e-111 412.0
59 TraesCS4A01G278500 chr5A 95.833 264 10 1 4237 4499 30990356 30990093 6.510000e-115 425.0
60 TraesCS4A01G278500 chr5A 95.076 264 12 1 4237 4499 618310020 618310283 1.410000e-111 414.0
61 TraesCS4A01G278500 chr1B 86.957 276 25 8 2333 2600 326789075 326789347 4.120000e-77 300.0
62 TraesCS4A01G278500 chr2A 86.770 257 29 5 6183 6437 196126036 196125783 1.490000e-71 281.0
63 TraesCS4A01G278500 chr2A 89.222 167 16 1 1264 1430 701775373 701775209 2.570000e-49 207.0
64 TraesCS4A01G278500 chr2A 88.485 165 18 1 6269 6432 195824727 195824563 1.550000e-46 198.0
65 TraesCS4A01G278500 chr3A 97.222 36 1 0 6864 6899 740403282 740403247 2.120000e-05 62.1
66 TraesCS4A01G278500 chr3A 97.222 36 1 0 6809 6844 740403282 740403247 2.120000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G278500 chr4A 586430958 586437984 7026 True 12977.000000 12977 100.000000 1 7027 1 chr4A.!!$R3 7026
1 TraesCS4A01G278500 chr4A 538169047 538169843 796 False 287.500000 464 82.898000 186 1607 2 chr4A.!!$F3 1421
2 TraesCS4A01G278500 chr4B 25269732 25275532 5800 False 2096.750000 5101 93.238250 1 6186 4 chr4B.!!$F1 6185
3 TraesCS4A01G278500 chr4B 24833653 24838750 5097 True 783.428571 1358 90.185286 281 6186 7 chr4B.!!$R8 5905
4 TraesCS4A01G278500 chr4D 14990228 15000101 9873 False 1324.285714 2867 91.191286 1 6604 7 chr4D.!!$F2 6603
5 TraesCS4A01G278500 chr4D 448185110 448186620 1510 True 316.666667 446 87.087000 1692 2602 3 chr4D.!!$R1 910
6 TraesCS4A01G278500 chr3B 452548365 452554963 6598 False 874.262500 1914 91.283125 1 6183 8 chr3B.!!$F1 6182
7 TraesCS4A01G278500 chr1A 462127699 462129270 1571 False 320.666667 438 88.065667 1692 2590 3 chr1A.!!$F1 898
8 TraesCS4A01G278500 chr6B 88719682 88721389 1707 True 265.666667 427 87.780000 1692 2546 3 chr6B.!!$R1 854

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
514 529 0.103026 CATCGATTCTCTCACGGCCA 59.897 55.0 2.24 0.0 0.00 5.36 F
706 742 0.400213 CCTGTAACTGTCCCAGGCAA 59.600 55.0 11.36 0.0 39.36 4.52 F
2484 3933 0.606604 TGCTACCGAACCAGAGAACC 59.393 55.0 0.00 0.0 0.00 3.62 F
4246 7495 0.386113 GCTAGCAAGTACTCCCTCCG 59.614 60.0 10.63 0.0 0.00 4.63 F
4249 7498 1.349067 AGCAAGTACTCCCTCCGTTT 58.651 50.0 0.00 0.0 0.00 3.60 F
5149 8515 0.179034 GAGGAGGCAAGGCGATCAAT 60.179 55.0 0.00 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1330 1464 1.130938 GAGAGACGAGTTTCGAGGGTC 59.869 57.143 5.38 0.0 43.74 4.46 R
2563 4021 3.728845 TGTGCTTTCTAGGTGTCACTTC 58.271 45.455 2.35 0.0 0.00 3.01 R
4483 7732 0.706433 TGGGTAGTACTCCCTCCGTT 59.294 55.000 23.01 0.0 44.84 4.44 R
5130 8496 0.179034 ATTGATCGCCTTGCCTCCTC 60.179 55.000 0.00 0.0 0.00 3.71 R
6002 9410 1.005924 CCAGGTAGTTGGGGCTTCATT 59.994 52.381 0.00 0.0 34.46 2.57 R
6811 10807 0.033504 ACTGAAGCGTCGACCATGTT 59.966 50.000 10.58 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 112 5.585820 TGTGTACTCGCTATAACCATTCA 57.414 39.130 0.00 0.00 0.00 2.57
108 115 5.808540 GTGTACTCGCTATAACCATTCACAA 59.191 40.000 0.00 0.00 0.00 3.33
124 131 7.073265 CCATTCACAATTTTCTGAAACATTGC 58.927 34.615 22.98 0.00 30.32 3.56
136 143 3.803231 TGAAACATTGCATGTGTTCTTGC 59.197 39.130 15.68 8.56 44.07 4.01
184 191 5.760253 GGCTTATGCAGATCAGCTTAACTAA 59.240 40.000 11.68 1.83 41.91 2.24
375 390 2.833582 ATGGAGTCGACGCGGGAT 60.834 61.111 12.47 2.53 0.00 3.85
514 529 0.103026 CATCGATTCTCTCACGGCCA 59.897 55.000 2.24 0.00 0.00 5.36
706 742 0.400213 CCTGTAACTGTCCCAGGCAA 59.600 55.000 11.36 0.00 39.36 4.52
720 756 2.352651 CCAGGCAACACAATACAGATCG 59.647 50.000 0.00 0.00 41.41 3.69
728 764 6.183360 GCAACACAATACAGATCGACATGTTA 60.183 38.462 9.40 0.00 0.00 2.41
746 833 2.766970 TACTTTTGAAACACCTGCGC 57.233 45.000 0.00 0.00 0.00 6.09
1001 1104 1.989586 TGCCGTGCCCCCTATATAAAT 59.010 47.619 0.00 0.00 0.00 1.40
1037 1147 4.599241 AGGAAGTCAAAGAGGAAGGATCAA 59.401 41.667 0.00 0.00 0.00 2.57
1048 1158 1.200020 GAAGGATCAACAGCGGTTTGG 59.800 52.381 0.00 0.00 34.21 3.28
1051 1161 1.523154 GATCAACAGCGGTTTGGCCA 61.523 55.000 0.00 0.00 34.21 5.36
1066 1176 2.358957 TGGCCAAGTTCATCTTCATCG 58.641 47.619 0.61 0.00 33.63 3.84
1085 1195 3.395639 TCGTACAGGTGAATCCAACAAC 58.604 45.455 0.00 0.00 39.02 3.32
1143 1253 1.682854 TGTTCTTGCTCTGCTTTTGGG 59.317 47.619 0.00 0.00 0.00 4.12
1165 1275 3.555586 GCATGCCTGTTTCTCATTTGGTT 60.556 43.478 6.36 0.00 0.00 3.67
1172 1282 6.514947 CCTGTTTCTCATTTGGTTTTGATGA 58.485 36.000 0.00 0.00 0.00 2.92
1173 1283 7.156673 CCTGTTTCTCATTTGGTTTTGATGAT 58.843 34.615 0.00 0.00 0.00 2.45
1256 1390 6.265422 GGAAGGGGATAACATGGTATTTCAAG 59.735 42.308 4.39 0.00 0.00 3.02
1260 1394 5.827797 GGGATAACATGGTATTTCAAGCAGA 59.172 40.000 4.39 0.00 0.00 4.26
1315 1449 5.419155 AGGTGTTTCTAGTCTCGATTCATCA 59.581 40.000 0.00 0.00 0.00 3.07
1330 1464 1.012086 CATCAGTTCGGATGGCAGTG 58.988 55.000 0.00 0.00 40.75 3.66
1355 1489 2.739913 CTCGAAACTCGTCTCTCAGTCT 59.260 50.000 0.00 0.00 41.35 3.24
1395 1529 6.813152 CAGTTTGGTTGTCTTGTGATCTTTTT 59.187 34.615 0.00 0.00 0.00 1.94
1431 1565 4.817318 TTCTCTTTTGCCTGTTGGTTTT 57.183 36.364 0.00 0.00 35.27 2.43
1479 1626 6.825721 CCTAATCTTTCAGCTTGGTTAGTCAT 59.174 38.462 0.00 0.00 0.00 3.06
1480 1627 6.506500 AATCTTTCAGCTTGGTTAGTCATG 57.493 37.500 0.00 0.00 0.00 3.07
1502 1654 6.049955 TGACTGGTGTTTATCTTCTTAGGG 57.950 41.667 0.00 0.00 0.00 3.53
1514 1666 1.016415 TCTTAGGGTCTAGCTGGGGT 58.984 55.000 0.00 0.00 0.00 4.95
1515 1667 1.123928 CTTAGGGTCTAGCTGGGGTG 58.876 60.000 0.00 0.00 0.00 4.61
1522 1674 2.286045 TAGCTGGGGTGGGCATGA 60.286 61.111 0.00 0.00 0.00 3.07
1805 1964 0.871057 GCTGACTGTCACTGAAAGCC 59.129 55.000 6.36 0.00 37.60 4.35
1826 1985 4.021981 GCCTGGCTGGTATTGATTATTTCC 60.022 45.833 12.43 0.00 38.35 3.13
1863 2022 5.369833 TGTAGTTAGCACTGCCAAAGTTTA 58.630 37.500 0.00 0.00 36.83 2.01
1932 2091 3.688673 GCAAGAGAGTTTCCTCATCCAAG 59.311 47.826 0.00 0.00 40.40 3.61
2317 2622 3.612860 CCGAACAATGTTAGAGAAGTCCG 59.387 47.826 7.80 0.00 0.00 4.79
2484 3933 0.606604 TGCTACCGAACCAGAGAACC 59.393 55.000 0.00 0.00 0.00 3.62
2527 3976 2.173569 GGCAAGGTGAGATGGGATACTT 59.826 50.000 0.00 0.00 0.00 2.24
2563 4021 7.974482 TCTGATCTTGCCATATTTGTATCAG 57.026 36.000 0.00 0.00 40.13 2.90
2568 4029 7.558161 TCTTGCCATATTTGTATCAGAAGTG 57.442 36.000 0.00 0.00 0.00 3.16
2607 4068 4.138290 ACAAATTACAACACCACCATCGA 58.862 39.130 0.00 0.00 0.00 3.59
2617 4088 1.271325 ACCACCATCGATGACAAGCAA 60.271 47.619 26.86 0.00 0.00 3.91
2632 4103 5.623264 TGACAAGCAACGAAAATCATAAACG 59.377 36.000 0.00 0.00 0.00 3.60
2639 4158 7.754924 AGCAACGAAAATCATAAACGATCAAAT 59.245 29.630 0.00 0.00 0.00 2.32
2682 4203 9.921637 GGAGTTATCCTTAGATATTTCACTGAG 57.078 37.037 0.00 0.00 42.94 3.35
2721 4250 2.571202 TGATAGAACATGTGGCAGACCA 59.429 45.455 0.00 0.00 46.51 4.02
2818 4349 3.196254 AGGGGCTGATTTGCACAAATTAG 59.804 43.478 18.52 18.52 43.27 1.73
2983 6207 6.457392 GCATTGTCAGTCATACAGGTATGTTG 60.457 42.308 16.61 15.47 42.57 3.33
3318 6560 1.880027 GACCGCCAAAACTCAGTTGAT 59.120 47.619 0.00 0.00 0.00 2.57
3800 7046 7.253453 GCATTCTCTTTGAAGCGCTTATTTAAC 60.253 37.037 25.11 10.14 38.18 2.01
4193 7442 1.098050 GCTCATGTTTACAGGCCAGG 58.902 55.000 5.01 0.00 0.00 4.45
4240 7489 3.119101 TGCACTTAGGCTAGCAAGTACTC 60.119 47.826 18.24 10.86 33.29 2.59
4241 7490 3.738590 GCACTTAGGCTAGCAAGTACTCC 60.739 52.174 18.24 4.63 33.29 3.85
4242 7491 3.032459 ACTTAGGCTAGCAAGTACTCCC 58.968 50.000 18.24 0.00 33.29 4.30
4243 7492 3.301274 CTTAGGCTAGCAAGTACTCCCT 58.699 50.000 18.24 3.28 0.00 4.20
4244 7493 1.783071 AGGCTAGCAAGTACTCCCTC 58.217 55.000 18.24 0.00 0.00 4.30
4245 7494 0.753867 GGCTAGCAAGTACTCCCTCC 59.246 60.000 18.24 0.00 0.00 4.30
4246 7495 0.386113 GCTAGCAAGTACTCCCTCCG 59.614 60.000 10.63 0.00 0.00 4.63
4247 7496 1.765230 CTAGCAAGTACTCCCTCCGT 58.235 55.000 0.00 0.00 0.00 4.69
4248 7497 2.100989 CTAGCAAGTACTCCCTCCGTT 58.899 52.381 0.00 0.00 0.00 4.44
4249 7498 1.349067 AGCAAGTACTCCCTCCGTTT 58.651 50.000 0.00 0.00 0.00 3.60
4250 7499 1.697982 AGCAAGTACTCCCTCCGTTTT 59.302 47.619 0.00 0.00 0.00 2.43
4251 7500 2.105993 AGCAAGTACTCCCTCCGTTTTT 59.894 45.455 0.00 0.00 0.00 1.94
4252 7501 3.325716 AGCAAGTACTCCCTCCGTTTTTA 59.674 43.478 0.00 0.00 0.00 1.52
4253 7502 4.019591 AGCAAGTACTCCCTCCGTTTTTAT 60.020 41.667 0.00 0.00 0.00 1.40
4254 7503 4.698780 GCAAGTACTCCCTCCGTTTTTATT 59.301 41.667 0.00 0.00 0.00 1.40
4255 7504 5.182570 GCAAGTACTCCCTCCGTTTTTATTT 59.817 40.000 0.00 0.00 0.00 1.40
4256 7505 6.372381 GCAAGTACTCCCTCCGTTTTTATTTA 59.628 38.462 0.00 0.00 0.00 1.40
4257 7506 7.413767 GCAAGTACTCCCTCCGTTTTTATTTAG 60.414 40.741 0.00 0.00 0.00 1.85
4258 7507 7.250032 AGTACTCCCTCCGTTTTTATTTAGT 57.750 36.000 0.00 0.00 0.00 2.24
4259 7508 7.683578 AGTACTCCCTCCGTTTTTATTTAGTT 58.316 34.615 0.00 0.00 0.00 2.24
4260 7509 7.821359 AGTACTCCCTCCGTTTTTATTTAGTTC 59.179 37.037 0.00 0.00 0.00 3.01
4261 7510 5.640783 ACTCCCTCCGTTTTTATTTAGTTCG 59.359 40.000 0.00 0.00 0.00 3.95
4262 7511 4.392754 TCCCTCCGTTTTTATTTAGTTCGC 59.607 41.667 0.00 0.00 0.00 4.70
4263 7512 4.154556 CCCTCCGTTTTTATTTAGTTCGCA 59.845 41.667 0.00 0.00 0.00 5.10
4264 7513 5.163693 CCCTCCGTTTTTATTTAGTTCGCAT 60.164 40.000 0.00 0.00 0.00 4.73
4265 7514 6.037391 CCCTCCGTTTTTATTTAGTTCGCATA 59.963 38.462 0.00 0.00 0.00 3.14
4266 7515 7.255001 CCCTCCGTTTTTATTTAGTTCGCATAT 60.255 37.037 0.00 0.00 0.00 1.78
4267 7516 8.126700 CCTCCGTTTTTATTTAGTTCGCATATT 58.873 33.333 0.00 0.00 0.00 1.28
4270 7519 9.925268 CCGTTTTTATTTAGTTCGCATATTAGT 57.075 29.630 0.00 0.00 0.00 2.24
4278 7527 7.908827 TTAGTTCGCATATTAGTTTTGGTCA 57.091 32.000 0.00 0.00 0.00 4.02
4279 7528 6.811253 AGTTCGCATATTAGTTTTGGTCAA 57.189 33.333 0.00 0.00 0.00 3.18
4280 7529 7.209471 AGTTCGCATATTAGTTTTGGTCAAA 57.791 32.000 0.00 0.00 0.00 2.69
4281 7530 7.305474 AGTTCGCATATTAGTTTTGGTCAAAG 58.695 34.615 0.00 0.00 0.00 2.77
4282 7531 6.811253 TCGCATATTAGTTTTGGTCAAAGT 57.189 33.333 0.00 0.00 32.41 2.66
4283 7532 6.837992 TCGCATATTAGTTTTGGTCAAAGTC 58.162 36.000 0.00 0.00 30.16 3.01
4284 7533 6.428465 TCGCATATTAGTTTTGGTCAAAGTCA 59.572 34.615 0.00 0.00 30.16 3.41
4285 7534 7.041030 TCGCATATTAGTTTTGGTCAAAGTCAA 60.041 33.333 0.00 0.00 30.16 3.18
4286 7535 7.271223 CGCATATTAGTTTTGGTCAAAGTCAAG 59.729 37.037 0.00 0.00 30.16 3.02
4287 7536 7.062255 GCATATTAGTTTTGGTCAAAGTCAAGC 59.938 37.037 0.00 0.00 30.16 4.01
4288 7537 6.715347 ATTAGTTTTGGTCAAAGTCAAGCT 57.285 33.333 0.00 0.00 30.16 3.74
4289 7538 6.524101 TTAGTTTTGGTCAAAGTCAAGCTT 57.476 33.333 0.00 0.00 39.52 3.74
4302 7551 7.812309 AAAGTCAAGCTTTGTAAACTTTGAC 57.188 32.000 14.76 14.88 45.00 3.18
4303 7552 6.759497 AGTCAAGCTTTGTAAACTTTGACT 57.241 33.333 17.37 17.37 32.23 3.41
4304 7553 7.158099 AGTCAAGCTTTGTAAACTTTGACTT 57.842 32.000 17.37 8.79 32.71 3.01
4305 7554 8.276252 AGTCAAGCTTTGTAAACTTTGACTTA 57.724 30.769 17.37 0.00 32.71 2.24
4306 7555 8.398665 AGTCAAGCTTTGTAAACTTTGACTTAG 58.601 33.333 17.37 0.00 32.71 2.18
4307 7556 8.182227 GTCAAGCTTTGTAAACTTTGACTTAGT 58.818 33.333 0.00 0.00 0.00 2.24
4308 7557 8.736244 TCAAGCTTTGTAAACTTTGACTTAGTT 58.264 29.630 0.00 0.00 37.43 2.24
4309 7558 9.353999 CAAGCTTTGTAAACTTTGACTTAGTTT 57.646 29.630 0.00 0.00 45.19 2.66
4456 7705 5.391312 ACTTTGCAAAGTTTGACTTCAGT 57.609 34.783 33.85 12.06 46.52 3.41
4457 7706 5.402398 ACTTTGCAAAGTTTGACTTCAGTC 58.598 37.500 33.85 0.00 46.52 3.51
4471 7720 6.985188 GACTTCAGTCAAACCTAATATGCA 57.015 37.500 1.86 0.00 44.18 3.96
4472 7721 6.992063 ACTTCAGTCAAACCTAATATGCAG 57.008 37.500 0.00 0.00 0.00 4.41
4473 7722 6.711277 ACTTCAGTCAAACCTAATATGCAGA 58.289 36.000 0.00 0.00 0.00 4.26
4474 7723 6.595716 ACTTCAGTCAAACCTAATATGCAGAC 59.404 38.462 0.00 0.00 0.00 3.51
4475 7724 6.299805 TCAGTCAAACCTAATATGCAGACT 57.700 37.500 0.00 0.00 35.66 3.24
4476 7725 7.418337 TCAGTCAAACCTAATATGCAGACTA 57.582 36.000 0.00 0.00 33.72 2.59
4477 7726 7.847096 TCAGTCAAACCTAATATGCAGACTAA 58.153 34.615 0.00 0.00 33.72 2.24
4478 7727 8.318412 TCAGTCAAACCTAATATGCAGACTAAA 58.682 33.333 0.00 0.00 33.72 1.85
4479 7728 9.113838 CAGTCAAACCTAATATGCAGACTAAAT 57.886 33.333 0.00 0.00 33.72 1.40
4487 7736 9.878599 CCTAATATGCAGACTAAATAAAAACGG 57.121 33.333 0.00 0.00 0.00 4.44
4490 7739 5.873179 TGCAGACTAAATAAAAACGGAGG 57.127 39.130 0.00 0.00 0.00 4.30
4491 7740 4.698304 TGCAGACTAAATAAAAACGGAGGG 59.302 41.667 0.00 0.00 0.00 4.30
4492 7741 4.939439 GCAGACTAAATAAAAACGGAGGGA 59.061 41.667 0.00 0.00 0.00 4.20
4493 7742 5.064834 GCAGACTAAATAAAAACGGAGGGAG 59.935 44.000 0.00 0.00 0.00 4.30
4494 7743 6.171213 CAGACTAAATAAAAACGGAGGGAGT 58.829 40.000 0.00 0.00 0.00 3.85
4495 7744 7.325694 CAGACTAAATAAAAACGGAGGGAGTA 58.674 38.462 0.00 0.00 0.00 2.59
4496 7745 7.277319 CAGACTAAATAAAAACGGAGGGAGTAC 59.723 40.741 0.00 0.00 0.00 2.73
4497 7746 7.179872 AGACTAAATAAAAACGGAGGGAGTACT 59.820 37.037 0.00 0.00 0.00 2.73
4513 7762 4.384208 GGAGTACTACCCAAGTGATGCATT 60.384 45.833 0.00 0.00 39.39 3.56
4751 8006 6.104392 ACCTCCTTACAGGTAGTAGATATGGT 59.896 42.308 0.00 0.00 45.71 3.55
4752 8013 6.660094 CCTCCTTACAGGTAGTAGATATGGTC 59.340 46.154 0.00 0.00 36.53 4.02
4833 8094 1.480137 CTTGGGTTGTTTGGTGCTTCA 59.520 47.619 0.00 0.00 0.00 3.02
4838 8099 3.123050 GGTTGTTTGGTGCTTCAATGTC 58.877 45.455 0.00 0.00 0.00 3.06
4846 8107 3.758023 TGGTGCTTCAATGTCATTGTAGG 59.242 43.478 25.01 16.89 41.02 3.18
5012 8273 4.051237 GTTGCTTGACAAGGTTTCATTCC 58.949 43.478 16.80 0.00 39.50 3.01
5019 8280 4.103153 TGACAAGGTTTCATTCCTGTCTCT 59.897 41.667 0.00 0.00 35.84 3.10
5024 8285 4.290722 AGGTTTCATTCCTGTCTCTTGGAT 59.709 41.667 0.00 0.00 33.62 3.41
5025 8286 4.397417 GGTTTCATTCCTGTCTCTTGGATG 59.603 45.833 0.00 0.00 31.76 3.51
5038 8299 2.170166 CTTGGATGCCAGCCTTTGTTA 58.830 47.619 0.00 0.00 33.81 2.41
5051 8417 6.708949 CCAGCCTTTGTTAGAACTACTTGTTA 59.291 38.462 0.00 0.00 39.30 2.41
5052 8418 7.095187 CCAGCCTTTGTTAGAACTACTTGTTAG 60.095 40.741 0.00 0.00 39.30 2.34
5053 8419 7.441458 CAGCCTTTGTTAGAACTACTTGTTAGT 59.559 37.037 0.00 0.00 43.46 2.24
5085 8451 9.770097 ATTAGTCTTGAGTTGTGACCATATATG 57.230 33.333 5.68 5.68 0.00 1.78
5097 8463 3.887621 CCATATATGGTACCCACTCCG 57.112 52.381 21.85 0.00 43.05 4.63
5098 8464 3.437213 CCATATATGGTACCCACTCCGA 58.563 50.000 21.85 0.00 43.05 4.55
5099 8465 3.835978 CCATATATGGTACCCACTCCGAA 59.164 47.826 21.85 0.00 43.05 4.30
5100 8466 4.469945 CCATATATGGTACCCACTCCGAAT 59.530 45.833 21.85 0.00 43.05 3.34
5101 8467 5.659525 CCATATATGGTACCCACTCCGAATA 59.340 44.000 21.85 0.00 43.05 1.75
5102 8468 6.406624 CCATATATGGTACCCACTCCGAATAC 60.407 46.154 21.85 0.00 43.05 1.89
5103 8469 2.537633 TGGTACCCACTCCGAATACT 57.462 50.000 10.07 0.00 0.00 2.12
5104 8470 2.104967 TGGTACCCACTCCGAATACTG 58.895 52.381 10.07 0.00 0.00 2.74
5105 8471 2.291735 TGGTACCCACTCCGAATACTGA 60.292 50.000 10.07 0.00 0.00 3.41
5106 8472 2.963782 GGTACCCACTCCGAATACTGAT 59.036 50.000 0.00 0.00 0.00 2.90
5107 8473 3.005578 GGTACCCACTCCGAATACTGATC 59.994 52.174 0.00 0.00 0.00 2.92
5108 8474 2.747177 ACCCACTCCGAATACTGATCA 58.253 47.619 0.00 0.00 0.00 2.92
5109 8475 3.309296 ACCCACTCCGAATACTGATCAT 58.691 45.455 0.00 0.00 0.00 2.45
5110 8476 4.480115 ACCCACTCCGAATACTGATCATA 58.520 43.478 0.00 0.00 0.00 2.15
5111 8477 5.087323 ACCCACTCCGAATACTGATCATAT 58.913 41.667 0.00 0.00 0.00 1.78
5112 8478 5.544176 ACCCACTCCGAATACTGATCATATT 59.456 40.000 0.00 3.18 0.00 1.28
5113 8479 6.043243 ACCCACTCCGAATACTGATCATATTT 59.957 38.462 0.00 0.00 0.00 1.40
5114 8480 6.591834 CCCACTCCGAATACTGATCATATTTC 59.408 42.308 0.00 0.00 0.00 2.17
5115 8481 7.382110 CCACTCCGAATACTGATCATATTTCT 58.618 38.462 0.00 0.00 0.00 2.52
5116 8482 7.543868 CCACTCCGAATACTGATCATATTTCTC 59.456 40.741 0.00 0.00 0.00 2.87
5117 8483 8.084684 CACTCCGAATACTGATCATATTTCTCA 58.915 37.037 0.00 0.00 0.00 3.27
5118 8484 8.811017 ACTCCGAATACTGATCATATTTCTCAT 58.189 33.333 0.00 0.00 0.00 2.90
5137 8503 7.652524 TCTCATAAGTATATCATGAGGAGGC 57.347 40.000 15.56 0.00 43.78 4.70
5138 8504 7.184862 TCTCATAAGTATATCATGAGGAGGCA 58.815 38.462 15.56 0.00 43.78 4.75
5139 8505 7.675619 TCTCATAAGTATATCATGAGGAGGCAA 59.324 37.037 15.56 0.00 43.78 4.52
5140 8506 7.845037 TCATAAGTATATCATGAGGAGGCAAG 58.155 38.462 0.09 0.00 0.00 4.01
5141 8507 5.495926 AAGTATATCATGAGGAGGCAAGG 57.504 43.478 0.09 0.00 0.00 3.61
5142 8508 2.875094 ATATCATGAGGAGGCAAGGC 57.125 50.000 0.09 0.00 0.00 4.35
5143 8509 0.394192 TATCATGAGGAGGCAAGGCG 59.606 55.000 0.09 0.00 0.00 5.52
5144 8510 1.340399 ATCATGAGGAGGCAAGGCGA 61.340 55.000 0.09 0.00 0.00 5.54
5145 8511 1.147824 CATGAGGAGGCAAGGCGAT 59.852 57.895 0.00 0.00 0.00 4.58
5146 8512 0.883814 CATGAGGAGGCAAGGCGATC 60.884 60.000 0.00 0.00 0.00 3.69
5147 8513 1.340399 ATGAGGAGGCAAGGCGATCA 61.340 55.000 0.00 2.22 0.00 2.92
5148 8514 1.221840 GAGGAGGCAAGGCGATCAA 59.778 57.895 0.00 0.00 0.00 2.57
5149 8515 0.179034 GAGGAGGCAAGGCGATCAAT 60.179 55.000 0.00 0.00 0.00 2.57
5150 8516 1.070758 GAGGAGGCAAGGCGATCAATA 59.929 52.381 0.00 0.00 0.00 1.90
5151 8517 1.701847 AGGAGGCAAGGCGATCAATAT 59.298 47.619 0.00 0.00 0.00 1.28
5152 8518 2.906389 AGGAGGCAAGGCGATCAATATA 59.094 45.455 0.00 0.00 0.00 0.86
5153 8519 3.521126 AGGAGGCAAGGCGATCAATATAT 59.479 43.478 0.00 0.00 0.00 0.86
5154 8520 3.624861 GGAGGCAAGGCGATCAATATATG 59.375 47.826 0.00 0.00 0.00 1.78
5155 8521 4.256920 GAGGCAAGGCGATCAATATATGT 58.743 43.478 0.00 0.00 0.00 2.29
5156 8522 4.655963 AGGCAAGGCGATCAATATATGTT 58.344 39.130 0.00 0.00 0.00 2.71
5157 8523 4.697352 AGGCAAGGCGATCAATATATGTTC 59.303 41.667 0.00 0.00 0.00 3.18
5158 8524 4.697352 GGCAAGGCGATCAATATATGTTCT 59.303 41.667 0.00 0.00 0.00 3.01
5159 8525 5.182001 GGCAAGGCGATCAATATATGTTCTT 59.818 40.000 0.00 0.00 0.00 2.52
5160 8526 6.294176 GGCAAGGCGATCAATATATGTTCTTT 60.294 38.462 0.00 0.00 0.00 2.52
5161 8527 7.094805 GGCAAGGCGATCAATATATGTTCTTTA 60.095 37.037 0.00 0.00 0.00 1.85
5162 8528 7.746475 GCAAGGCGATCAATATATGTTCTTTAC 59.254 37.037 0.00 0.00 0.00 2.01
5163 8529 8.993121 CAAGGCGATCAATATATGTTCTTTACT 58.007 33.333 0.00 0.00 0.00 2.24
5164 8530 9.561069 AAGGCGATCAATATATGTTCTTTACTT 57.439 29.630 0.00 0.00 0.00 2.24
5165 8531 9.561069 AGGCGATCAATATATGTTCTTTACTTT 57.439 29.630 0.00 0.00 0.00 2.66
5166 8532 9.813080 GGCGATCAATATATGTTCTTTACTTTC 57.187 33.333 0.00 0.00 0.00 2.62
5184 8550 9.796120 TTTACTTTCAAGAATGTAACAAGTTGG 57.204 29.630 16.26 0.00 39.24 3.77
5185 8551 7.404671 ACTTTCAAGAATGTAACAAGTTGGT 57.595 32.000 7.96 2.53 0.00 3.67
5186 8552 7.480810 ACTTTCAAGAATGTAACAAGTTGGTC 58.519 34.615 7.96 0.00 0.00 4.02
5187 8553 7.339466 ACTTTCAAGAATGTAACAAGTTGGTCT 59.661 33.333 7.96 0.00 0.00 3.85
5188 8554 8.740123 TTTCAAGAATGTAACAAGTTGGTCTA 57.260 30.769 7.96 0.00 0.00 2.59
5189 8555 8.740123 TTCAAGAATGTAACAAGTTGGTCTAA 57.260 30.769 7.96 0.00 0.00 2.10
5190 8556 8.918202 TCAAGAATGTAACAAGTTGGTCTAAT 57.082 30.769 7.96 0.00 0.00 1.73
5196 8562 9.975218 AATGTAACAAGTTGGTCTAATATTCCT 57.025 29.630 7.96 0.00 0.00 3.36
5197 8563 9.614792 ATGTAACAAGTTGGTCTAATATTCCTC 57.385 33.333 7.96 0.00 0.00 3.71
5198 8564 8.598916 TGTAACAAGTTGGTCTAATATTCCTCA 58.401 33.333 7.96 0.00 0.00 3.86
5199 8565 9.444600 GTAACAAGTTGGTCTAATATTCCTCAA 57.555 33.333 7.96 0.00 0.00 3.02
5200 8566 8.934023 AACAAGTTGGTCTAATATTCCTCAAA 57.066 30.769 7.96 0.00 0.00 2.69
5513 8879 1.154338 GCGTCAGTGCTGCACATTC 60.154 57.895 31.90 19.64 36.74 2.67
5542 8930 8.842280 CCCTAATTTGTAAAGCATAATTCGGTA 58.158 33.333 0.00 0.00 29.38 4.02
5556 8944 7.441458 GCATAATTCGGTACTTTTGTATCCTCT 59.559 37.037 0.00 0.00 37.24 3.69
5610 8998 3.433343 TGATCCATTGGTGCAAAGACAT 58.567 40.909 1.86 0.00 0.00 3.06
5667 9055 3.279434 ACCGAAACTTTCTGCTGAAACT 58.721 40.909 14.07 3.86 37.27 2.66
5733 9125 3.152341 CCATTCTGTGAAACCTTGCTCT 58.848 45.455 0.00 0.00 34.36 4.09
6002 9410 4.019321 CAGGAGGTTCTTCTATTCCCAACA 60.019 45.833 0.00 0.00 0.00 3.33
6023 9431 0.770557 TGAAGCCCCAACTACCTGGT 60.771 55.000 4.05 4.05 34.33 4.00
6043 9451 4.568956 GGTTAGTAGGAAACCGCTGTTTA 58.431 43.478 6.21 0.00 44.57 2.01
6128 9540 2.546368 GCATGGTTTCACACGAGTGTTA 59.454 45.455 12.78 0.00 46.01 2.41
6258 9692 2.177394 TGTCCATGTTTAAGCGCAGA 57.823 45.000 11.47 0.00 0.00 4.26
6313 9747 0.834612 TCAAAGGACACCGGACTTGT 59.165 50.000 9.46 0.69 0.00 3.16
6328 9762 3.600388 GACTTGTAACACCCATCTCCAG 58.400 50.000 0.00 0.00 0.00 3.86
6364 9798 8.877864 AACTTTTCTTTATGTATGTGGGATCA 57.122 30.769 0.00 0.00 0.00 2.92
6365 9799 8.281212 ACTTTTCTTTATGTATGTGGGATCAC 57.719 34.615 0.00 0.00 43.87 3.06
6402 9836 1.869767 CTTTCTCACAGCCTGTCACAC 59.130 52.381 0.00 0.00 0.00 3.82
6460 9922 0.323908 CCAATTTCCCGGCTTACCCA 60.324 55.000 0.00 0.00 0.00 4.51
6473 9935 3.118223 GGCTTACCCAGATCAGCTTAACT 60.118 47.826 0.00 0.00 32.52 2.24
6516 10021 3.025287 ACCACAATTGCCGAAAACATC 57.975 42.857 5.05 0.00 0.00 3.06
6557 10086 7.986804 GTTTGCTGAAAACACTAAAAACAAC 57.013 32.000 6.37 0.00 46.30 3.32
6559 10088 5.462405 TGCTGAAAACACTAAAAACAACGT 58.538 33.333 0.00 0.00 0.00 3.99
6567 10096 5.956642 ACACTAAAAACAACGTTTGACCAT 58.043 33.333 0.00 0.00 0.00 3.55
6596 10125 0.754957 CAAAACTGACAGTGGGCCCA 60.755 55.000 24.45 24.45 0.00 5.36
6597 10126 0.188342 AAAACTGACAGTGGGCCCAT 59.812 50.000 31.45 13.20 0.00 4.00
6598 10127 0.251341 AAACTGACAGTGGGCCCATC 60.251 55.000 31.45 22.61 0.00 3.51
6600 10129 2.531428 TGACAGTGGGCCCATCCA 60.531 61.111 31.45 19.94 36.21 3.41
6601 10130 1.929860 CTGACAGTGGGCCCATCCAT 61.930 60.000 31.45 14.57 39.26 3.41
6602 10131 1.152881 GACAGTGGGCCCATCCATC 60.153 63.158 31.45 19.34 39.26 3.51
6603 10132 1.925285 GACAGTGGGCCCATCCATCA 61.925 60.000 31.45 0.00 39.26 3.07
6614 10143 0.184211 CATCCATCACATCAGGGCCA 59.816 55.000 6.18 0.00 0.00 5.36
6615 10144 0.184451 ATCCATCACATCAGGGCCAC 59.816 55.000 6.18 0.00 0.00 5.01
6620 10149 3.249189 ACATCAGGGCCACGTGGT 61.249 61.111 33.92 13.66 37.57 4.16
6622 10151 2.607750 ATCAGGGCCACGTGGTCT 60.608 61.111 36.07 27.99 40.38 3.85
6627 10156 2.722201 GGGCCACGTGGTCTAGGAG 61.722 68.421 36.07 9.45 40.38 3.69
6628 10157 2.722201 GGCCACGTGGTCTAGGAGG 61.722 68.421 33.92 7.46 36.72 4.30
6629 10158 2.893398 CCACGTGGTCTAGGAGGC 59.107 66.667 26.95 0.00 0.00 4.70
6630 10159 1.682684 CCACGTGGTCTAGGAGGCT 60.683 63.158 26.95 0.00 0.00 4.58
6631 10160 1.513158 CACGTGGTCTAGGAGGCTG 59.487 63.158 7.95 0.00 0.00 4.85
6632 10161 2.352032 ACGTGGTCTAGGAGGCTGC 61.352 63.158 0.00 0.00 0.00 5.25
6634 10163 0.752009 CGTGGTCTAGGAGGCTGCTA 60.752 60.000 15.33 15.33 0.00 3.49
6636 10165 0.631753 TGGTCTAGGAGGCTGCTAGT 59.368 55.000 33.27 7.19 39.16 2.57
6637 10166 1.850998 TGGTCTAGGAGGCTGCTAGTA 59.149 52.381 33.27 21.36 39.16 1.82
6638 10167 2.232399 GGTCTAGGAGGCTGCTAGTAC 58.768 57.143 33.27 28.07 39.16 2.73
6639 10168 2.232399 GTCTAGGAGGCTGCTAGTACC 58.768 57.143 33.27 21.88 39.16 3.34
6640 10169 1.850998 TCTAGGAGGCTGCTAGTACCA 59.149 52.381 33.27 17.74 39.16 3.25
6641 10170 2.243994 TCTAGGAGGCTGCTAGTACCAA 59.756 50.000 33.27 17.41 39.16 3.67
6642 10171 2.182516 AGGAGGCTGCTAGTACCAAT 57.817 50.000 6.79 0.00 0.00 3.16
6643 10172 2.043227 AGGAGGCTGCTAGTACCAATC 58.957 52.381 6.79 0.00 0.00 2.67
6644 10173 1.762957 GGAGGCTGCTAGTACCAATCA 59.237 52.381 0.00 0.00 0.00 2.57
6647 10176 1.933853 GGCTGCTAGTACCAATCAACG 59.066 52.381 0.00 0.00 0.00 4.10
6648 10177 1.327764 GCTGCTAGTACCAATCAACGC 59.672 52.381 0.00 0.00 0.00 4.84
6649 10178 1.588404 CTGCTAGTACCAATCAACGCG 59.412 52.381 3.53 3.53 0.00 6.01
6650 10179 0.928229 GCTAGTACCAATCAACGCGG 59.072 55.000 12.47 0.00 0.00 6.46
6651 10180 1.567504 CTAGTACCAATCAACGCGGG 58.432 55.000 12.47 2.56 0.00 6.13
6652 10181 1.135527 CTAGTACCAATCAACGCGGGA 59.864 52.381 12.47 8.34 0.00 5.14
6653 10182 0.322322 AGTACCAATCAACGCGGGAA 59.678 50.000 12.47 0.00 0.00 3.97
6654 10183 1.158434 GTACCAATCAACGCGGGAAA 58.842 50.000 12.47 0.00 0.00 3.13
6655 10184 1.741145 GTACCAATCAACGCGGGAAAT 59.259 47.619 12.47 0.00 0.00 2.17
6657 10186 0.808125 CCAATCAACGCGGGAAATCA 59.192 50.000 12.47 0.00 0.00 2.57
6659 10188 1.468520 CAATCAACGCGGGAAATCAGT 59.531 47.619 12.47 0.00 0.00 3.41
6661 10190 1.011968 TCAACGCGGGAAATCAGTCG 61.012 55.000 12.47 0.00 0.00 4.18
6662 10191 1.740296 AACGCGGGAAATCAGTCGG 60.740 57.895 12.47 0.00 0.00 4.79
6663 10192 2.890474 CGCGGGAAATCAGTCGGG 60.890 66.667 0.00 0.00 0.00 5.14
6665 10194 1.376812 GCGGGAAATCAGTCGGGTT 60.377 57.895 0.00 0.00 0.00 4.11
6667 10196 0.036765 CGGGAAATCAGTCGGGTTGA 60.037 55.000 0.00 0.00 0.00 3.18
6678 10207 4.629523 GGGTTGACGGCCGTCCAA 62.630 66.667 45.59 35.90 43.97 3.53
6679 10208 2.359478 GGTTGACGGCCGTCCAAT 60.359 61.111 45.59 20.73 43.97 3.16
6680 10209 2.396157 GGTTGACGGCCGTCCAATC 61.396 63.158 45.59 35.03 43.97 2.67
6681 10210 2.433491 TTGACGGCCGTCCAATCG 60.433 61.111 45.59 14.35 43.97 3.34
6688 10217 2.586079 CCGTCCAATCGCGCTGAT 60.586 61.111 5.56 7.42 39.67 2.90
6689 10218 2.589492 CCGTCCAATCGCGCTGATC 61.589 63.158 5.56 0.00 35.84 2.92
6690 10219 1.589993 CGTCCAATCGCGCTGATCT 60.590 57.895 5.56 0.00 35.84 2.75
6691 10220 1.815212 CGTCCAATCGCGCTGATCTG 61.815 60.000 5.56 10.52 35.84 2.90
6692 10221 1.227350 TCCAATCGCGCTGATCTGG 60.227 57.895 21.91 21.91 35.84 3.86
6695 10224 0.511653 CAATCGCGCTGATCTGGATG 59.488 55.000 5.56 1.50 35.84 3.51
6696 10225 0.390492 AATCGCGCTGATCTGGATGA 59.610 50.000 5.56 0.00 35.84 2.92
6698 10227 0.390492 TCGCGCTGATCTGGATGAAT 59.610 50.000 5.56 0.00 0.00 2.57
6699 10228 0.788995 CGCGCTGATCTGGATGAATC 59.211 55.000 5.56 0.00 0.00 2.52
6712 10241 4.931661 GGATGAATCCTGTGCATTGATT 57.068 40.909 1.86 7.72 43.73 2.57
6713 10242 5.272283 GGATGAATCCTGTGCATTGATTT 57.728 39.130 1.86 0.00 43.73 2.17
6714 10243 5.667466 GGATGAATCCTGTGCATTGATTTT 58.333 37.500 1.86 2.57 43.73 1.82
6715 10244 5.522460 GGATGAATCCTGTGCATTGATTTTG 59.478 40.000 1.86 0.00 43.73 2.44
6716 10245 4.823157 TGAATCCTGTGCATTGATTTTGG 58.177 39.130 8.96 0.00 0.00 3.28
6717 10246 4.283978 TGAATCCTGTGCATTGATTTTGGT 59.716 37.500 8.96 0.00 0.00 3.67
6719 10248 3.229293 TCCTGTGCATTGATTTTGGTCA 58.771 40.909 0.00 0.00 0.00 4.02
6720 10249 3.640498 TCCTGTGCATTGATTTTGGTCAA 59.360 39.130 0.00 0.00 41.88 3.18
6721 10250 4.283978 TCCTGTGCATTGATTTTGGTCAAT 59.716 37.500 0.00 0.00 46.77 2.57
6728 10257 4.669206 TTGATTTTGGTCAATGCACACT 57.331 36.364 0.00 0.00 33.41 3.55
6729 10258 3.979948 TGATTTTGGTCAATGCACACTG 58.020 40.909 0.00 0.00 0.00 3.66
6730 10259 3.635836 TGATTTTGGTCAATGCACACTGA 59.364 39.130 0.00 0.00 0.00 3.41
6731 10260 4.281435 TGATTTTGGTCAATGCACACTGAT 59.719 37.500 0.00 0.00 0.00 2.90
6733 10262 5.375417 TTTTGGTCAATGCACACTGATAG 57.625 39.130 0.00 0.00 0.00 2.08
6734 10263 3.979101 TGGTCAATGCACACTGATAGA 57.021 42.857 0.00 0.00 0.00 1.98
6736 10265 4.002982 TGGTCAATGCACACTGATAGAAC 58.997 43.478 0.00 0.00 0.00 3.01
6737 10266 3.375299 GGTCAATGCACACTGATAGAACC 59.625 47.826 0.00 0.00 0.00 3.62
6740 10269 1.656587 TGCACACTGATAGAACCCCT 58.343 50.000 0.00 0.00 0.00 4.79
6741 10270 1.278985 TGCACACTGATAGAACCCCTG 59.721 52.381 0.00 0.00 0.00 4.45
6742 10271 2.014068 GCACACTGATAGAACCCCTGC 61.014 57.143 0.00 0.00 0.00 4.85
6743 10272 1.556911 CACACTGATAGAACCCCTGCT 59.443 52.381 0.00 0.00 0.00 4.24
6744 10273 2.026822 CACACTGATAGAACCCCTGCTT 60.027 50.000 0.00 0.00 0.00 3.91
6746 10275 1.482593 ACTGATAGAACCCCTGCTTCG 59.517 52.381 0.00 0.00 0.00 3.79
6747 10276 1.482593 CTGATAGAACCCCTGCTTCGT 59.517 52.381 0.00 0.00 0.00 3.85
6748 10277 1.906574 TGATAGAACCCCTGCTTCGTT 59.093 47.619 0.00 0.00 0.00 3.85
6749 10278 2.093658 TGATAGAACCCCTGCTTCGTTC 60.094 50.000 0.00 0.00 36.88 3.95
6750 10279 1.640917 TAGAACCCCTGCTTCGTTCT 58.359 50.000 6.87 6.87 46.04 3.01
6751 10280 0.321996 AGAACCCCTGCTTCGTTCTC 59.678 55.000 0.00 0.00 41.82 2.87
6752 10281 0.321996 GAACCCCTGCTTCGTTCTCT 59.678 55.000 0.00 0.00 34.40 3.10
6754 10283 0.321996 ACCCCTGCTTCGTTCTCTTC 59.678 55.000 0.00 0.00 0.00 2.87
6755 10284 0.391793 CCCCTGCTTCGTTCTCTTCC 60.392 60.000 0.00 0.00 0.00 3.46
6756 10285 0.391793 CCCTGCTTCGTTCTCTTCCC 60.392 60.000 0.00 0.00 0.00 3.97
6758 10287 0.321671 CTGCTTCGTTCTCTTCCCCA 59.678 55.000 0.00 0.00 0.00 4.96
6759 10288 0.034896 TGCTTCGTTCTCTTCCCCAC 59.965 55.000 0.00 0.00 0.00 4.61
6760 10289 0.034896 GCTTCGTTCTCTTCCCCACA 59.965 55.000 0.00 0.00 0.00 4.17
6761 10290 1.797025 CTTCGTTCTCTTCCCCACAC 58.203 55.000 0.00 0.00 0.00 3.82
6762 10291 1.070134 CTTCGTTCTCTTCCCCACACA 59.930 52.381 0.00 0.00 0.00 3.72
6763 10292 0.391597 TCGTTCTCTTCCCCACACAC 59.608 55.000 0.00 0.00 0.00 3.82
6764 10293 0.105964 CGTTCTCTTCCCCACACACA 59.894 55.000 0.00 0.00 0.00 3.72
6765 10294 1.270839 CGTTCTCTTCCCCACACACAT 60.271 52.381 0.00 0.00 0.00 3.21
6766 10295 2.427506 GTTCTCTTCCCCACACACATC 58.572 52.381 0.00 0.00 0.00 3.06
6767 10296 0.608130 TCTCTTCCCCACACACATCG 59.392 55.000 0.00 0.00 0.00 3.84
6768 10297 1.003839 TCTTCCCCACACACATCGC 60.004 57.895 0.00 0.00 0.00 4.58
6769 10298 2.033448 TTCCCCACACACATCGCC 59.967 61.111 0.00 0.00 0.00 5.54
6770 10299 2.469465 CTTCCCCACACACATCGCCT 62.469 60.000 0.00 0.00 0.00 5.52
6771 10300 2.436646 CCCCACACACATCGCCTC 60.437 66.667 0.00 0.00 0.00 4.70
6774 10303 1.577328 CCCACACACATCGCCTCAAC 61.577 60.000 0.00 0.00 0.00 3.18
6775 10304 1.492873 CACACACATCGCCTCAACG 59.507 57.895 0.00 0.00 0.00 4.10
6776 10305 2.317609 ACACACATCGCCTCAACGC 61.318 57.895 0.00 0.00 0.00 4.84
6777 10306 2.030412 ACACATCGCCTCAACGCA 59.970 55.556 0.00 0.00 0.00 5.24
6778 10307 2.317609 ACACATCGCCTCAACGCAC 61.318 57.895 0.00 0.00 0.00 5.34
6780 10309 1.375908 ACATCGCCTCAACGCACAT 60.376 52.632 0.00 0.00 0.00 3.21
6782 10311 0.301687 CATCGCCTCAACGCACATAC 59.698 55.000 0.00 0.00 0.00 2.39
6783 10312 0.108377 ATCGCCTCAACGCACATACA 60.108 50.000 0.00 0.00 0.00 2.29
6784 10313 0.735978 TCGCCTCAACGCACATACAG 60.736 55.000 0.00 0.00 0.00 2.74
6785 10314 1.425428 GCCTCAACGCACATACAGC 59.575 57.895 0.00 0.00 0.00 4.40
6786 10315 1.982073 GCCTCAACGCACATACAGCC 61.982 60.000 0.00 0.00 0.00 4.85
6787 10316 0.673333 CCTCAACGCACATACAGCCA 60.673 55.000 0.00 0.00 0.00 4.75
6794 10790 3.402681 ACATACAGCCAGCGCCCT 61.403 61.111 2.29 0.00 34.57 5.19
6819 10815 4.101790 CCGCGGCACAACATGGTC 62.102 66.667 14.67 0.00 0.00 4.02
6820 10816 4.444024 CGCGGCACAACATGGTCG 62.444 66.667 0.00 0.00 0.00 4.79
6821 10817 3.047280 GCGGCACAACATGGTCGA 61.047 61.111 0.00 0.00 0.00 4.20
6822 10818 2.860293 CGGCACAACATGGTCGAC 59.140 61.111 7.13 7.13 0.00 4.20
6823 10819 2.860293 GGCACAACATGGTCGACG 59.140 61.111 9.92 0.00 0.00 5.12
6825 10821 2.317609 GCACAACATGGTCGACGCT 61.318 57.895 9.92 0.00 0.00 5.07
6828 10824 0.249699 ACAACATGGTCGACGCTTCA 60.250 50.000 9.92 1.71 0.00 3.02
6829 10825 0.439985 CAACATGGTCGACGCTTCAG 59.560 55.000 9.92 0.00 0.00 3.02
6830 10826 0.033504 AACATGGTCGACGCTTCAGT 59.966 50.000 9.92 0.00 0.00 3.41
6832 10828 1.738099 ATGGTCGACGCTTCAGTGC 60.738 57.895 9.92 0.00 0.00 4.40
6833 10829 2.355837 GGTCGACGCTTCAGTGCA 60.356 61.111 9.92 0.00 0.00 4.57
6835 10831 2.734723 TCGACGCTTCAGTGCAGC 60.735 61.111 4.51 4.51 0.00 5.25
6841 10837 3.782244 CTTCAGTGCAGCGTCGCC 61.782 66.667 14.86 0.00 0.00 5.54
6862 10858 3.522731 CCCTCCTCTCGCCGTCTG 61.523 72.222 0.00 0.00 0.00 3.51
6863 10859 4.200283 CCTCCTCTCGCCGTCTGC 62.200 72.222 0.00 0.00 0.00 4.26
6864 10860 3.443925 CTCCTCTCGCCGTCTGCA 61.444 66.667 0.00 0.00 41.33 4.41
6865 10861 3.691744 CTCCTCTCGCCGTCTGCAC 62.692 68.421 0.00 0.00 41.33 4.57
6867 10863 2.049156 CTCTCGCCGTCTGCACAA 60.049 61.111 0.00 0.00 41.33 3.33
6868 10864 2.355837 TCTCGCCGTCTGCACAAC 60.356 61.111 0.00 0.00 41.33 3.32
6869 10865 2.661537 CTCGCCGTCTGCACAACA 60.662 61.111 0.00 0.00 41.33 3.33
6870 10866 2.029288 CTCGCCGTCTGCACAACAT 61.029 57.895 0.00 0.00 41.33 2.71
6873 10869 2.260869 GCCGTCTGCACAACATGGT 61.261 57.895 0.00 0.00 40.77 3.55
6874 10870 1.868997 CCGTCTGCACAACATGGTC 59.131 57.895 0.00 0.00 0.00 4.02
6875 10871 1.492873 CGTCTGCACAACATGGTCG 59.507 57.895 0.00 0.00 0.00 4.79
6876 10872 0.943835 CGTCTGCACAACATGGTCGA 60.944 55.000 0.00 0.00 0.00 4.20
6880 10876 2.317609 GCACAACATGGTCGACGCT 61.318 57.895 9.92 0.00 0.00 5.07
6881 10877 1.841663 GCACAACATGGTCGACGCTT 61.842 55.000 9.92 0.00 0.00 4.68
6882 10878 0.163788 CACAACATGGTCGACGCTTC 59.836 55.000 9.92 0.00 0.00 3.86
6883 10879 0.249699 ACAACATGGTCGACGCTTCA 60.250 50.000 9.92 1.71 0.00 3.02
6885 10881 0.033504 AACATGGTCGACGCTTCAGT 59.966 50.000 9.92 0.00 0.00 3.41
6886 10882 0.667487 ACATGGTCGACGCTTCAGTG 60.667 55.000 9.92 5.26 0.00 3.66
6887 10883 1.738099 ATGGTCGACGCTTCAGTGC 60.738 57.895 9.92 0.00 0.00 4.40
6888 10884 2.355837 GGTCGACGCTTCAGTGCA 60.356 61.111 9.92 0.00 0.00 4.57
6889 10885 2.375766 GGTCGACGCTTCAGTGCAG 61.376 63.158 9.92 0.00 0.00 4.41
6895 10891 4.436448 GCTTCAGTGCAGCGTCGC 62.436 66.667 9.80 9.80 0.00 5.19
6938 10934 4.724697 CAACGCCGCGCTTCAGTG 62.725 66.667 13.88 0.34 0.00 3.66
6947 10943 1.280746 CGCTTCAGTGCAGTGTTGG 59.719 57.895 20.73 12.67 0.00 3.77
6948 10944 1.439353 CGCTTCAGTGCAGTGTTGGT 61.439 55.000 20.73 0.00 0.00 3.67
6949 10945 0.029834 GCTTCAGTGCAGTGTTGGTG 59.970 55.000 20.73 8.95 0.00 4.17
6950 10946 0.029834 CTTCAGTGCAGTGTTGGTGC 59.970 55.000 20.73 0.00 41.59 5.01
6951 10947 1.383456 TTCAGTGCAGTGTTGGTGCC 61.383 55.000 20.73 0.00 40.43 5.01
6952 10948 2.519302 AGTGCAGTGTTGGTGCCC 60.519 61.111 0.00 0.00 40.43 5.36
6953 10949 2.832661 GTGCAGTGTTGGTGCCCA 60.833 61.111 0.00 0.00 40.43 5.36
6955 10951 2.203337 GCAGTGTTGGTGCCCAGA 60.203 61.111 0.00 0.00 33.81 3.86
6956 10952 2.555547 GCAGTGTTGGTGCCCAGAC 61.556 63.158 0.00 0.00 33.81 3.51
6957 10953 1.149174 CAGTGTTGGTGCCCAGACT 59.851 57.895 0.00 0.00 33.81 3.24
6960 10956 2.426023 GTTGGTGCCCAGACTCGT 59.574 61.111 0.00 0.00 33.81 4.18
6962 10958 3.220999 TTGGTGCCCAGACTCGTCG 62.221 63.158 0.00 0.00 33.81 5.12
6968 10964 4.838486 CCAGACTCGTCGCGCCTC 62.838 72.222 0.00 0.00 34.09 4.70
6969 10965 4.838486 CAGACTCGTCGCGCCTCC 62.838 72.222 0.00 0.00 34.09 4.30
6981 10977 4.341783 GCCTCCCTGCAGCACTGT 62.342 66.667 8.66 0.00 0.00 3.55
6982 10978 2.046507 CCTCCCTGCAGCACTGTC 60.047 66.667 8.66 0.00 0.00 3.51
6983 10979 2.433838 CTCCCTGCAGCACTGTCG 60.434 66.667 8.66 0.00 0.00 4.35
6984 10980 3.231889 CTCCCTGCAGCACTGTCGT 62.232 63.158 8.66 0.00 0.00 4.34
6986 10982 3.108289 CCTGCAGCACTGTCGTCG 61.108 66.667 8.66 0.00 0.00 5.12
6987 10983 3.771491 CTGCAGCACTGTCGTCGC 61.771 66.667 0.00 0.00 0.00 5.19
7022 11018 3.644606 CCCTCCCTGCAGCACTGT 61.645 66.667 8.66 0.00 0.00 3.55
7023 11019 2.046507 CCTCCCTGCAGCACTGTC 60.047 66.667 8.66 0.00 0.00 3.51
7025 11021 2.917227 TCCCTGCAGCACTGTCGA 60.917 61.111 8.66 0.00 0.00 4.20
7026 11022 2.740055 CCCTGCAGCACTGTCGAC 60.740 66.667 8.66 9.11 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 9.915629 TGCGTACACATGTATAATGTATCATAA 57.084 29.630 0.00 0.00 31.79 1.90
82 84 5.459107 GTGAATGGTTATAGCGAGTACACAG 59.541 44.000 0.00 0.00 0.00 3.66
92 97 9.638239 TTTCAGAAAATTGTGAATGGTTATAGC 57.362 29.630 6.57 0.00 39.72 2.97
124 131 2.749621 GGGAGTTAGGCAAGAACACATG 59.250 50.000 0.00 0.00 0.00 3.21
136 143 6.603599 CCAGAAAATAGGAAAAGGGAGTTAGG 59.396 42.308 0.00 0.00 0.00 2.69
706 742 6.631016 AGTAACATGTCGATCTGTATTGTGT 58.369 36.000 0.00 0.00 0.00 3.72
720 756 5.458779 GCAGGTGTTTCAAAAGTAACATGTC 59.541 40.000 0.00 0.00 36.72 3.06
728 764 1.102978 AGCGCAGGTGTTTCAAAAGT 58.897 45.000 11.47 0.00 36.17 2.66
746 833 6.895782 TCCCAAGTAACAGTATTATTCCCAG 58.104 40.000 0.00 0.00 0.00 4.45
1037 1147 1.734388 GAACTTGGCCAAACCGCTGT 61.734 55.000 20.91 9.90 43.94 4.40
1048 1158 3.932710 TGTACGATGAAGATGAACTTGGC 59.067 43.478 0.00 0.00 39.13 4.52
1051 1161 5.047306 TCACCTGTACGATGAAGATGAACTT 60.047 40.000 0.00 0.00 42.03 2.66
1066 1176 4.084013 CGAAGTTGTTGGATTCACCTGTAC 60.084 45.833 0.00 0.00 39.86 2.90
1085 1195 3.114558 GAGCACCACTCACTCGAAG 57.885 57.895 0.00 0.00 45.49 3.79
1143 1253 2.028748 ACCAAATGAGAAACAGGCATGC 60.029 45.455 9.90 9.90 0.00 4.06
1165 1275 2.290450 TGTCTCCAGCTGCATCATCAAA 60.290 45.455 8.66 0.00 0.00 2.69
1172 1282 0.825410 CTCTCTGTCTCCAGCTGCAT 59.175 55.000 8.66 0.00 38.66 3.96
1173 1283 0.251519 TCTCTCTGTCTCCAGCTGCA 60.252 55.000 8.66 0.00 38.66 4.41
1260 1394 4.379302 AGAAAAGGGAGAAGTGCAGATT 57.621 40.909 0.00 0.00 0.00 2.40
1315 1449 1.296715 GGTCACTGCCATCCGAACT 59.703 57.895 0.00 0.00 0.00 3.01
1330 1464 1.130938 GAGAGACGAGTTTCGAGGGTC 59.869 57.143 5.38 0.00 43.74 4.46
1355 1489 7.562088 ACAACCAAACTGGAATTTCCTAGTAAA 59.438 33.333 16.25 0.00 40.96 2.01
1395 1529 7.040409 GGCAAAAGAGAAAATTCAGAGGAGTAA 60.040 37.037 0.00 0.00 0.00 2.24
1396 1530 6.431234 GGCAAAAGAGAAAATTCAGAGGAGTA 59.569 38.462 0.00 0.00 0.00 2.59
1431 1565 1.731709 CTAAGCGCATGCAGTACAACA 59.268 47.619 19.57 0.00 46.23 3.33
1479 1626 5.546499 ACCCTAAGAAGATAAACACCAGTCA 59.454 40.000 0.00 0.00 0.00 3.41
1480 1627 6.051179 ACCCTAAGAAGATAAACACCAGTC 57.949 41.667 0.00 0.00 0.00 3.51
1502 1654 2.378634 ATGCCCACCCCAGCTAGAC 61.379 63.158 0.00 0.00 0.00 2.59
1805 1964 6.266103 ACATGGAAATAATCAATACCAGCCAG 59.734 38.462 0.00 0.00 30.93 4.85
1826 1985 7.385205 AGTGCTAACTACAGTTACTTTCACATG 59.615 37.037 14.57 0.00 39.31 3.21
1863 2022 7.439056 CACAAACAAATAATTTCAGGAAGCAGT 59.561 33.333 0.00 0.00 0.00 4.40
1932 2091 6.090628 CGCCATAGAGATCATAAAAGAAGAGC 59.909 42.308 0.00 0.00 0.00 4.09
2317 2622 4.510038 AGGCATCAAGTGTCAATTTCAC 57.490 40.909 3.20 3.20 33.88 3.18
2539 3988 7.738847 TCTGATACAAATATGGCAAGATCAGA 58.261 34.615 14.07 14.07 43.43 3.27
2561 4019 3.743396 GTGCTTTCTAGGTGTCACTTCTG 59.257 47.826 2.35 0.00 0.00 3.02
2563 4021 3.728845 TGTGCTTTCTAGGTGTCACTTC 58.271 45.455 2.35 0.00 0.00 3.01
2568 4029 4.893424 TTTGTTGTGCTTTCTAGGTGTC 57.107 40.909 0.00 0.00 0.00 3.67
2607 4068 6.305399 CGTTTATGATTTTCGTTGCTTGTCAT 59.695 34.615 0.00 0.00 0.00 3.06
2656 4177 9.921637 CTCAGTGAAATATCTAAGGATAACTCC 57.078 37.037 0.00 0.00 42.43 3.85
2660 4181 8.928448 AGTGCTCAGTGAAATATCTAAGGATAA 58.072 33.333 0.00 0.00 37.87 1.75
2692 4213 5.651576 TGCCACATGTTCTATCATTAAAGCA 59.348 36.000 0.00 0.00 0.00 3.91
2773 4303 2.206750 GCCGACTTTATATTCACGCCA 58.793 47.619 0.00 0.00 0.00 5.69
2818 4349 2.774439 AATTCCGAAGTGTGCACAAC 57.226 45.000 23.59 15.68 0.00 3.32
2968 6192 6.406961 CCTTAGTGAGCAACATACCTGTATGA 60.407 42.308 20.95 0.00 44.22 2.15
2983 6207 4.333926 CCTCTTTTATGTGCCTTAGTGAGC 59.666 45.833 0.00 0.00 0.00 4.26
3020 6244 2.163818 TCAGGTAAAAGTGGACTGCG 57.836 50.000 0.00 0.00 0.00 5.18
3108 6333 8.173412 AGATGTCTAGGTAGAATATCATGGTCA 58.827 37.037 11.92 0.00 33.81 4.02
3146 6372 7.633789 ACATCTTGTATTGAAAGGGTGTATCT 58.366 34.615 0.00 0.00 0.00 1.98
3318 6560 8.551205 GCTCGAACACATCATTAAATTCTCATA 58.449 33.333 0.00 0.00 0.00 2.15
3560 6806 3.602390 AACATTCAAAACTGGTCGACG 57.398 42.857 9.92 0.00 0.00 5.12
3846 7092 3.882888 GTGTCTCAACCTGGAAAATGACA 59.117 43.478 0.00 5.54 0.00 3.58
4168 7417 2.162408 GCCTGTAAACATGAGCCAGAAC 59.838 50.000 0.00 0.00 0.00 3.01
4240 7489 4.154556 TGCGAACTAAATAAAAACGGAGGG 59.845 41.667 0.00 0.00 0.00 4.30
4241 7490 5.285798 TGCGAACTAAATAAAAACGGAGG 57.714 39.130 0.00 0.00 0.00 4.30
4244 7493 9.925268 ACTAATATGCGAACTAAATAAAAACGG 57.075 29.630 0.00 0.00 0.00 4.44
4252 7501 8.952278 TGACCAAAACTAATATGCGAACTAAAT 58.048 29.630 0.00 0.00 0.00 1.40
4253 7502 8.325421 TGACCAAAACTAATATGCGAACTAAA 57.675 30.769 0.00 0.00 0.00 1.85
4254 7503 7.908827 TGACCAAAACTAATATGCGAACTAA 57.091 32.000 0.00 0.00 0.00 2.24
4255 7504 7.908827 TTGACCAAAACTAATATGCGAACTA 57.091 32.000 0.00 0.00 0.00 2.24
4256 7505 6.811253 TTGACCAAAACTAATATGCGAACT 57.189 33.333 0.00 0.00 0.00 3.01
4257 7506 7.081976 ACTTTGACCAAAACTAATATGCGAAC 58.918 34.615 0.00 0.00 0.00 3.95
4258 7507 7.041030 TGACTTTGACCAAAACTAATATGCGAA 60.041 33.333 0.00 0.00 0.00 4.70
4259 7508 6.428465 TGACTTTGACCAAAACTAATATGCGA 59.572 34.615 0.00 0.00 0.00 5.10
4260 7509 6.607689 TGACTTTGACCAAAACTAATATGCG 58.392 36.000 0.00 0.00 0.00 4.73
4261 7510 7.062255 GCTTGACTTTGACCAAAACTAATATGC 59.938 37.037 0.00 0.00 0.00 3.14
4262 7511 8.299570 AGCTTGACTTTGACCAAAACTAATATG 58.700 33.333 0.00 0.00 0.00 1.78
4263 7512 8.409358 AGCTTGACTTTGACCAAAACTAATAT 57.591 30.769 0.00 0.00 0.00 1.28
4264 7513 7.817418 AGCTTGACTTTGACCAAAACTAATA 57.183 32.000 0.00 0.00 0.00 0.98
4265 7514 6.715347 AGCTTGACTTTGACCAAAACTAAT 57.285 33.333 0.00 0.00 0.00 1.73
4266 7515 6.524101 AAGCTTGACTTTGACCAAAACTAA 57.476 33.333 0.00 0.00 33.71 2.24
4267 7516 6.524101 AAAGCTTGACTTTGACCAAAACTA 57.476 33.333 0.00 0.00 47.00 2.24
4268 7517 5.405935 AAAGCTTGACTTTGACCAAAACT 57.594 34.783 0.00 0.00 47.00 2.66
4279 7528 7.158099 AGTCAAAGTTTACAAAGCTTGACTT 57.842 32.000 17.55 3.36 42.47 3.01
4280 7529 6.759497 AGTCAAAGTTTACAAAGCTTGACT 57.241 33.333 17.55 17.55 41.47 3.41
4281 7530 8.182227 ACTAAGTCAAAGTTTACAAAGCTTGAC 58.818 33.333 0.00 14.97 39.07 3.18
4282 7531 8.276252 ACTAAGTCAAAGTTTACAAAGCTTGA 57.724 30.769 0.00 0.00 0.00 3.02
4283 7532 8.911247 AACTAAGTCAAAGTTTACAAAGCTTG 57.089 30.769 0.00 0.00 33.39 4.01
4433 7682 5.863935 GACTGAAGTCAAACTTTGCAAAGTT 59.136 36.000 39.24 39.24 45.77 2.66
4434 7683 5.402398 GACTGAAGTCAAACTTTGCAAAGT 58.598 37.500 33.85 33.85 45.95 2.66
4435 7684 5.938883 GACTGAAGTCAAACTTTGCAAAG 57.061 39.130 32.53 32.53 44.18 2.77
4448 7697 6.818644 TCTGCATATTAGGTTTGACTGAAGTC 59.181 38.462 3.41 3.41 44.97 3.01
4449 7698 6.595716 GTCTGCATATTAGGTTTGACTGAAGT 59.404 38.462 0.00 0.00 0.00 3.01
4450 7699 6.820656 AGTCTGCATATTAGGTTTGACTGAAG 59.179 38.462 0.00 0.00 33.09 3.02
4451 7700 6.711277 AGTCTGCATATTAGGTTTGACTGAA 58.289 36.000 0.00 0.00 33.09 3.02
4452 7701 6.299805 AGTCTGCATATTAGGTTTGACTGA 57.700 37.500 0.00 0.00 33.09 3.41
4453 7702 8.492673 TTTAGTCTGCATATTAGGTTTGACTG 57.507 34.615 7.85 0.00 35.52 3.51
4461 7710 9.878599 CCGTTTTTATTTAGTCTGCATATTAGG 57.121 33.333 0.00 0.00 0.00 2.69
4464 7713 8.621286 CCTCCGTTTTTATTTAGTCTGCATATT 58.379 33.333 0.00 0.00 0.00 1.28
4465 7714 7.228706 CCCTCCGTTTTTATTTAGTCTGCATAT 59.771 37.037 0.00 0.00 0.00 1.78
4466 7715 6.540914 CCCTCCGTTTTTATTTAGTCTGCATA 59.459 38.462 0.00 0.00 0.00 3.14
4467 7716 5.357032 CCCTCCGTTTTTATTTAGTCTGCAT 59.643 40.000 0.00 0.00 0.00 3.96
4468 7717 4.698304 CCCTCCGTTTTTATTTAGTCTGCA 59.302 41.667 0.00 0.00 0.00 4.41
4469 7718 4.939439 TCCCTCCGTTTTTATTTAGTCTGC 59.061 41.667 0.00 0.00 0.00 4.26
4470 7719 6.171213 ACTCCCTCCGTTTTTATTTAGTCTG 58.829 40.000 0.00 0.00 0.00 3.51
4471 7720 6.370186 ACTCCCTCCGTTTTTATTTAGTCT 57.630 37.500 0.00 0.00 0.00 3.24
4472 7721 7.326454 AGTACTCCCTCCGTTTTTATTTAGTC 58.674 38.462 0.00 0.00 0.00 2.59
4473 7722 7.250032 AGTACTCCCTCCGTTTTTATTTAGT 57.750 36.000 0.00 0.00 0.00 2.24
4474 7723 7.708322 GGTAGTACTCCCTCCGTTTTTATTTAG 59.292 40.741 0.00 0.00 0.00 1.85
4475 7724 7.364673 GGGTAGTACTCCCTCCGTTTTTATTTA 60.365 40.741 18.19 0.00 41.58 1.40
4476 7725 6.409704 GGTAGTACTCCCTCCGTTTTTATTT 58.590 40.000 0.00 0.00 0.00 1.40
4477 7726 5.104776 GGGTAGTACTCCCTCCGTTTTTATT 60.105 44.000 18.19 0.00 41.58 1.40
4478 7727 4.406972 GGGTAGTACTCCCTCCGTTTTTAT 59.593 45.833 18.19 0.00 41.58 1.40
4479 7728 3.769300 GGGTAGTACTCCCTCCGTTTTTA 59.231 47.826 18.19 0.00 41.58 1.52
4480 7729 2.568956 GGGTAGTACTCCCTCCGTTTTT 59.431 50.000 18.19 0.00 41.58 1.94
4481 7730 2.182827 GGGTAGTACTCCCTCCGTTTT 58.817 52.381 18.19 0.00 41.58 2.43
4482 7731 1.077663 TGGGTAGTACTCCCTCCGTTT 59.922 52.381 23.01 0.00 44.84 3.60
4483 7732 0.706433 TGGGTAGTACTCCCTCCGTT 59.294 55.000 23.01 0.00 44.84 4.44
4484 7733 0.706433 TTGGGTAGTACTCCCTCCGT 59.294 55.000 23.01 0.00 44.84 4.69
4485 7734 1.341778 ACTTGGGTAGTACTCCCTCCG 60.342 57.143 23.01 15.97 44.84 4.63
4486 7735 2.108970 CACTTGGGTAGTACTCCCTCC 58.891 57.143 23.01 12.44 44.84 4.30
4487 7736 3.097342 TCACTTGGGTAGTACTCCCTC 57.903 52.381 23.01 8.25 44.84 4.30
4488 7737 3.375699 CATCACTTGGGTAGTACTCCCT 58.624 50.000 23.01 7.87 44.84 4.20
4489 7738 2.158943 GCATCACTTGGGTAGTACTCCC 60.159 54.545 18.49 18.49 44.81 4.30
4490 7739 2.500098 TGCATCACTTGGGTAGTACTCC 59.500 50.000 0.00 0.27 34.56 3.85
4491 7740 3.887621 TGCATCACTTGGGTAGTACTC 57.112 47.619 0.00 0.00 34.56 2.59
4492 7741 4.225042 TGAATGCATCACTTGGGTAGTACT 59.775 41.667 0.00 0.00 34.56 2.73
4493 7742 4.513442 TGAATGCATCACTTGGGTAGTAC 58.487 43.478 0.00 0.00 34.56 2.73
4494 7743 4.835284 TGAATGCATCACTTGGGTAGTA 57.165 40.909 0.00 0.00 34.56 1.82
4495 7744 3.719268 TGAATGCATCACTTGGGTAGT 57.281 42.857 0.00 0.00 37.68 2.73
4496 7745 3.317149 CCATGAATGCATCACTTGGGTAG 59.683 47.826 20.80 5.67 41.93 3.18
4497 7746 3.053768 TCCATGAATGCATCACTTGGGTA 60.054 43.478 24.54 13.04 41.93 3.69
4751 8006 3.593096 GTGCAGTCATGATGTTCAGAGA 58.407 45.455 0.00 0.00 0.00 3.10
4752 8013 2.676839 GGTGCAGTCATGATGTTCAGAG 59.323 50.000 0.00 0.00 0.00 3.35
4833 8094 9.552695 TCATATCTATCCTCCTACAATGACATT 57.447 33.333 0.00 0.00 0.00 2.71
4838 8099 7.789026 TGCATCATATCTATCCTCCTACAATG 58.211 38.462 0.00 0.00 0.00 2.82
4846 8107 6.154192 TCAGTTCCTGCATCATATCTATCCTC 59.846 42.308 0.00 0.00 0.00 3.71
5012 8273 0.747283 GGCTGGCATCCAAGAGACAG 60.747 60.000 1.71 0.00 30.80 3.51
5019 8280 2.170166 CTAACAAAGGCTGGCATCCAA 58.830 47.619 10.44 0.00 30.80 3.53
5024 8285 2.656947 AGTTCTAACAAAGGCTGGCA 57.343 45.000 3.38 0.00 0.00 4.92
5025 8286 3.676093 AGTAGTTCTAACAAAGGCTGGC 58.324 45.455 0.00 0.00 0.00 4.85
5059 8425 9.770097 CATATATGGTCACAACTCAAGACTAAT 57.230 33.333 4.68 0.00 32.98 1.73
5060 8426 8.204160 CCATATATGGTCACAACTCAAGACTAA 58.796 37.037 21.85 0.00 43.05 2.24
5061 8427 7.726216 CCATATATGGTCACAACTCAAGACTA 58.274 38.462 21.85 0.00 43.05 2.59
5062 8428 6.586344 CCATATATGGTCACAACTCAAGACT 58.414 40.000 21.85 0.00 43.05 3.24
5063 8429 6.851222 CCATATATGGTCACAACTCAAGAC 57.149 41.667 21.85 0.00 43.05 3.01
5086 8452 3.635373 TGATCAGTATTCGGAGTGGGTAC 59.365 47.826 0.00 0.00 0.00 3.34
5087 8453 3.905968 TGATCAGTATTCGGAGTGGGTA 58.094 45.455 0.00 0.00 0.00 3.69
5088 8454 2.747177 TGATCAGTATTCGGAGTGGGT 58.253 47.619 0.00 0.00 0.00 4.51
5089 8455 5.667539 ATATGATCAGTATTCGGAGTGGG 57.332 43.478 0.09 0.00 0.00 4.61
5090 8456 7.382110 AGAAATATGATCAGTATTCGGAGTGG 58.618 38.462 0.09 0.00 0.00 4.00
5091 8457 8.084684 TGAGAAATATGATCAGTATTCGGAGTG 58.915 37.037 0.09 0.00 0.00 3.51
5092 8458 8.183104 TGAGAAATATGATCAGTATTCGGAGT 57.817 34.615 0.09 0.00 0.00 3.85
5111 8477 8.535335 GCCTCCTCATGATATACTTATGAGAAA 58.465 37.037 17.72 9.17 46.71 2.52
5112 8478 7.675619 TGCCTCCTCATGATATACTTATGAGAA 59.324 37.037 17.72 3.94 46.71 2.87
5113 8479 7.184862 TGCCTCCTCATGATATACTTATGAGA 58.815 38.462 17.72 8.30 46.71 3.27
5114 8480 7.415592 TGCCTCCTCATGATATACTTATGAG 57.584 40.000 0.00 12.46 44.57 2.90
5115 8481 7.093156 CCTTGCCTCCTCATGATATACTTATGA 60.093 40.741 0.00 0.00 0.00 2.15
5116 8482 7.046652 CCTTGCCTCCTCATGATATACTTATG 58.953 42.308 0.00 0.00 0.00 1.90
5117 8483 6.352565 GCCTTGCCTCCTCATGATATACTTAT 60.353 42.308 0.00 0.00 0.00 1.73
5118 8484 5.046304 GCCTTGCCTCCTCATGATATACTTA 60.046 44.000 0.00 0.00 0.00 2.24
5119 8485 4.263243 GCCTTGCCTCCTCATGATATACTT 60.263 45.833 0.00 0.00 0.00 2.24
5120 8486 3.262915 GCCTTGCCTCCTCATGATATACT 59.737 47.826 0.00 0.00 0.00 2.12
5121 8487 3.604582 GCCTTGCCTCCTCATGATATAC 58.395 50.000 0.00 0.00 0.00 1.47
5122 8488 2.234661 CGCCTTGCCTCCTCATGATATA 59.765 50.000 0.00 0.00 0.00 0.86
5123 8489 1.002888 CGCCTTGCCTCCTCATGATAT 59.997 52.381 0.00 0.00 0.00 1.63
5124 8490 0.394192 CGCCTTGCCTCCTCATGATA 59.606 55.000 0.00 0.00 0.00 2.15
5125 8491 1.147824 CGCCTTGCCTCCTCATGAT 59.852 57.895 0.00 0.00 0.00 2.45
5126 8492 1.340399 ATCGCCTTGCCTCCTCATGA 61.340 55.000 0.00 0.00 0.00 3.07
5127 8493 0.883814 GATCGCCTTGCCTCCTCATG 60.884 60.000 0.00 0.00 0.00 3.07
5128 8494 1.340399 TGATCGCCTTGCCTCCTCAT 61.340 55.000 0.00 0.00 0.00 2.90
5129 8495 1.552799 TTGATCGCCTTGCCTCCTCA 61.553 55.000 0.00 0.00 0.00 3.86
5130 8496 0.179034 ATTGATCGCCTTGCCTCCTC 60.179 55.000 0.00 0.00 0.00 3.71
5131 8497 1.131638 TATTGATCGCCTTGCCTCCT 58.868 50.000 0.00 0.00 0.00 3.69
5132 8498 2.191128 ATATTGATCGCCTTGCCTCC 57.809 50.000 0.00 0.00 0.00 4.30
5133 8499 4.256920 ACATATATTGATCGCCTTGCCTC 58.743 43.478 0.00 0.00 0.00 4.70
5134 8500 4.292186 ACATATATTGATCGCCTTGCCT 57.708 40.909 0.00 0.00 0.00 4.75
5135 8501 4.697352 AGAACATATATTGATCGCCTTGCC 59.303 41.667 0.00 0.00 32.66 4.52
5136 8502 5.869753 AGAACATATATTGATCGCCTTGC 57.130 39.130 0.00 0.00 32.66 4.01
5137 8503 8.993121 AGTAAAGAACATATATTGATCGCCTTG 58.007 33.333 0.00 0.00 32.66 3.61
5138 8504 9.561069 AAGTAAAGAACATATATTGATCGCCTT 57.439 29.630 0.00 0.00 32.66 4.35
5139 8505 9.561069 AAAGTAAAGAACATATATTGATCGCCT 57.439 29.630 0.00 0.00 32.66 5.52
5140 8506 9.813080 GAAAGTAAAGAACATATATTGATCGCC 57.187 33.333 0.00 0.00 32.66 5.54
5158 8524 9.796120 CCAACTTGTTACATTCTTGAAAGTAAA 57.204 29.630 11.20 0.09 0.00 2.01
5159 8525 8.962679 ACCAACTTGTTACATTCTTGAAAGTAA 58.037 29.630 6.98 6.98 0.00 2.24
5160 8526 8.514330 ACCAACTTGTTACATTCTTGAAAGTA 57.486 30.769 0.00 0.00 0.00 2.24
5161 8527 7.339466 AGACCAACTTGTTACATTCTTGAAAGT 59.661 33.333 0.00 0.00 0.00 2.66
5162 8528 7.707104 AGACCAACTTGTTACATTCTTGAAAG 58.293 34.615 0.00 0.00 0.00 2.62
5163 8529 7.639113 AGACCAACTTGTTACATTCTTGAAA 57.361 32.000 0.00 0.00 0.00 2.69
5164 8530 8.740123 TTAGACCAACTTGTTACATTCTTGAA 57.260 30.769 0.00 0.00 0.00 2.69
5165 8531 8.918202 ATTAGACCAACTTGTTACATTCTTGA 57.082 30.769 0.00 0.00 0.00 3.02
5170 8536 9.975218 AGGAATATTAGACCAACTTGTTACATT 57.025 29.630 0.00 0.00 0.00 2.71
5171 8537 9.614792 GAGGAATATTAGACCAACTTGTTACAT 57.385 33.333 0.00 0.00 0.00 2.29
5172 8538 8.598916 TGAGGAATATTAGACCAACTTGTTACA 58.401 33.333 0.00 0.00 0.00 2.41
5173 8539 9.444600 TTGAGGAATATTAGACCAACTTGTTAC 57.555 33.333 0.00 0.00 0.00 2.50
5175 8541 8.934023 TTTGAGGAATATTAGACCAACTTGTT 57.066 30.769 0.00 0.00 0.00 2.83
5176 8542 8.934023 TTTTGAGGAATATTAGACCAACTTGT 57.066 30.769 0.00 0.00 0.00 3.16
5200 8566 9.884636 AAGATAAGTTAAACAAGCCAAGTTTTT 57.115 25.926 4.42 0.00 39.65 1.94
5275 8641 6.781138 TCAATAGACGTTATGGAATGTTTGC 58.219 36.000 0.00 0.00 34.83 3.68
5532 8920 9.326413 CAAGAGGATACAAAAGTACCGAATTAT 57.674 33.333 0.00 0.00 41.41 1.28
5542 8930 7.934120 GCATACCTATCAAGAGGATACAAAAGT 59.066 37.037 0.00 0.00 39.15 2.66
5556 8944 5.063204 GTGTAGGCATTGCATACCTATCAA 58.937 41.667 25.55 7.70 43.83 2.57
5610 8998 2.614779 CTCAGCTGCTCTTCAAATCGA 58.385 47.619 9.47 0.00 0.00 3.59
5667 9055 9.444600 AACGTGGCTCTAGAAATTTAATCTAAA 57.555 29.630 0.00 0.00 0.00 1.85
5733 9125 3.797353 GATTGCCGGCTCTGGGGA 61.797 66.667 29.70 1.01 0.00 4.81
5781 9174 1.373999 GAGAGCAGTGCAGAACGCT 60.374 57.895 19.20 4.18 43.06 5.07
5900 9293 5.609708 AGAAAAGAACTACAAAGAGGGGGTA 59.390 40.000 0.00 0.00 0.00 3.69
6002 9410 1.005924 CCAGGTAGTTGGGGCTTCATT 59.994 52.381 0.00 0.00 34.46 2.57
6023 9431 5.726980 TCTAAACAGCGGTTTCCTACTAA 57.273 39.130 18.38 0.00 43.60 2.24
6039 9447 6.877611 TTGTTGTCCCTCTTCAATCTAAAC 57.122 37.500 0.00 0.00 0.00 2.01
6043 9451 4.792068 TGTTTGTTGTCCCTCTTCAATCT 58.208 39.130 0.00 0.00 0.00 2.40
6097 9509 4.150980 GTGTGAAACCATGCATGTTTGATG 59.849 41.667 24.58 10.99 34.36 3.07
6098 9510 4.309099 GTGTGAAACCATGCATGTTTGAT 58.691 39.130 24.58 3.31 34.36 2.57
6099 9511 3.715495 GTGTGAAACCATGCATGTTTGA 58.285 40.909 24.58 15.58 34.36 2.69
6100 9512 2.472115 CGTGTGAAACCATGCATGTTTG 59.528 45.455 24.58 12.42 34.36 2.93
6128 9540 7.281774 CCAAGTAGCAGTCTTCAACAATGATAT 59.718 37.037 0.00 0.00 34.96 1.63
6258 9692 3.641434 ATGCAAGCTCATACTCTTGGT 57.359 42.857 0.00 0.00 39.87 3.67
6360 9794 1.333177 AGTAGGCCGAGGATGTGATC 58.667 55.000 0.00 0.00 0.00 2.92
6361 9795 1.794714 AAGTAGGCCGAGGATGTGAT 58.205 50.000 0.00 0.00 0.00 3.06
6362 9796 1.480954 GAAAGTAGGCCGAGGATGTGA 59.519 52.381 0.00 0.00 0.00 3.58
6363 9797 1.482593 AGAAAGTAGGCCGAGGATGTG 59.517 52.381 0.00 0.00 0.00 3.21
6364 9798 1.867363 AGAAAGTAGGCCGAGGATGT 58.133 50.000 0.00 0.00 0.00 3.06
6365 9799 2.990066 AAGAAAGTAGGCCGAGGATG 57.010 50.000 0.00 0.00 0.00 3.51
6371 9805 2.996621 CTGTGAGAAAGAAAGTAGGCCG 59.003 50.000 0.00 0.00 0.00 6.13
6432 9871 2.036604 GCCGGGAAATTGGAAACTTCAA 59.963 45.455 2.18 0.00 0.00 2.69
6433 9872 1.616374 GCCGGGAAATTGGAAACTTCA 59.384 47.619 2.18 0.00 0.00 3.02
6434 9873 1.893137 AGCCGGGAAATTGGAAACTTC 59.107 47.619 2.18 0.00 0.00 3.01
6443 9905 0.996583 TCTGGGTAAGCCGGGAAATT 59.003 50.000 2.18 0.00 34.97 1.82
6450 9912 0.179000 AAGCTGATCTGGGTAAGCCG 59.821 55.000 1.46 0.00 36.28 5.52
6460 9922 7.713073 GCAATTTACTCCTAGTTAAGCTGATCT 59.287 37.037 0.00 0.00 0.00 2.75
6495 9957 3.365465 CGATGTTTTCGGCAATTGTGGTA 60.365 43.478 7.40 0.00 44.28 3.25
6496 9958 2.606795 CGATGTTTTCGGCAATTGTGGT 60.607 45.455 7.40 0.00 44.28 4.16
6509 10014 9.541143 AACAAAATTACTCCAAATCGATGTTTT 57.459 25.926 0.00 0.00 0.00 2.43
6516 10021 6.640499 TCAGCAAACAAAATTACTCCAAATCG 59.360 34.615 0.00 0.00 0.00 3.34
6520 10025 7.969314 GTTTTCAGCAAACAAAATTACTCCAA 58.031 30.769 0.00 0.00 43.93 3.53
6533 10038 6.730177 CGTTGTTTTTAGTGTTTTCAGCAAAC 59.270 34.615 0.00 0.00 44.64 2.93
6557 10086 7.221838 AGTTTTGTGTCAAAATATGGTCAAACG 59.778 33.333 10.15 0.00 0.00 3.60
6559 10088 8.253810 TCAGTTTTGTGTCAAAATATGGTCAAA 58.746 29.630 10.15 0.00 0.00 2.69
6567 10096 6.405286 CCCACTGTCAGTTTTGTGTCAAAATA 60.405 38.462 1.67 0.00 0.00 1.40
6596 10125 0.184451 GTGGCCCTGATGTGATGGAT 59.816 55.000 0.00 0.00 0.00 3.41
6597 10126 1.609239 GTGGCCCTGATGTGATGGA 59.391 57.895 0.00 0.00 0.00 3.41
6598 10127 1.820906 CGTGGCCCTGATGTGATGG 60.821 63.158 0.00 0.00 0.00 3.51
6600 10129 1.078214 CACGTGGCCCTGATGTGAT 60.078 57.895 7.95 0.00 32.91 3.06
6601 10130 2.347114 CACGTGGCCCTGATGTGA 59.653 61.111 7.95 0.00 32.91 3.58
6602 10131 2.747460 CCACGTGGCCCTGATGTG 60.747 66.667 24.02 3.28 0.00 3.21
6603 10132 3.249189 ACCACGTGGCCCTGATGT 61.249 61.111 34.26 9.57 39.32 3.06
6614 10143 2.352032 GCAGCCTCCTAGACCACGT 61.352 63.158 0.00 0.00 0.00 4.49
6615 10144 0.752009 TAGCAGCCTCCTAGACCACG 60.752 60.000 0.00 0.00 0.00 4.94
6620 10149 1.850998 TGGTACTAGCAGCCTCCTAGA 59.149 52.381 0.00 0.00 36.60 2.43
6622 10151 2.840640 TTGGTACTAGCAGCCTCCTA 57.159 50.000 0.00 0.00 0.00 2.94
6627 10156 1.933853 CGTTGATTGGTACTAGCAGCC 59.066 52.381 0.00 0.00 0.00 4.85
6628 10157 1.327764 GCGTTGATTGGTACTAGCAGC 59.672 52.381 0.00 0.00 0.00 5.25
6629 10158 1.588404 CGCGTTGATTGGTACTAGCAG 59.412 52.381 0.00 0.00 0.00 4.24
6630 10159 1.635844 CGCGTTGATTGGTACTAGCA 58.364 50.000 0.00 0.00 0.00 3.49
6631 10160 0.928229 CCGCGTTGATTGGTACTAGC 59.072 55.000 4.92 0.00 0.00 3.42
6632 10161 1.135527 TCCCGCGTTGATTGGTACTAG 59.864 52.381 4.92 0.00 0.00 2.57
6634 10163 0.322322 TTCCCGCGTTGATTGGTACT 59.678 50.000 4.92 0.00 0.00 2.73
6636 10165 2.011222 GATTTCCCGCGTTGATTGGTA 58.989 47.619 4.92 0.00 0.00 3.25
6637 10166 0.808755 GATTTCCCGCGTTGATTGGT 59.191 50.000 4.92 0.00 0.00 3.67
6638 10167 0.808125 TGATTTCCCGCGTTGATTGG 59.192 50.000 4.92 0.00 0.00 3.16
6639 10168 1.468520 ACTGATTTCCCGCGTTGATTG 59.531 47.619 4.92 0.00 0.00 2.67
6640 10169 1.737793 GACTGATTTCCCGCGTTGATT 59.262 47.619 4.92 0.00 0.00 2.57
6641 10170 1.369625 GACTGATTTCCCGCGTTGAT 58.630 50.000 4.92 0.00 0.00 2.57
6642 10171 1.011968 CGACTGATTTCCCGCGTTGA 61.012 55.000 4.92 0.00 0.00 3.18
6643 10172 1.419922 CGACTGATTTCCCGCGTTG 59.580 57.895 4.92 0.00 0.00 4.10
6644 10173 1.740296 CCGACTGATTTCCCGCGTT 60.740 57.895 4.92 0.00 0.00 4.84
6647 10176 1.376812 AACCCGACTGATTTCCCGC 60.377 57.895 0.00 0.00 0.00 6.13
6648 10177 0.036765 TCAACCCGACTGATTTCCCG 60.037 55.000 0.00 0.00 0.00 5.14
6649 10178 1.450025 GTCAACCCGACTGATTTCCC 58.550 55.000 0.00 0.00 41.81 3.97
6650 10179 1.076332 CGTCAACCCGACTGATTTCC 58.924 55.000 0.00 0.00 42.98 3.13
6651 10180 1.076332 CCGTCAACCCGACTGATTTC 58.924 55.000 0.00 0.00 42.98 2.17
6652 10181 0.953960 GCCGTCAACCCGACTGATTT 60.954 55.000 0.00 0.00 42.98 2.17
6653 10182 1.375523 GCCGTCAACCCGACTGATT 60.376 57.895 0.00 0.00 42.98 2.57
6654 10183 2.264794 GCCGTCAACCCGACTGAT 59.735 61.111 0.00 0.00 42.98 2.90
6655 10184 3.998672 GGCCGTCAACCCGACTGA 61.999 66.667 0.00 0.00 42.98 3.41
6672 10201 1.589993 AGATCAGCGCGATTGGACG 60.590 57.895 12.10 0.00 33.17 4.79
6673 10202 1.493950 CCAGATCAGCGCGATTGGAC 61.494 60.000 12.10 5.39 35.75 4.02
6674 10203 1.227350 CCAGATCAGCGCGATTGGA 60.227 57.895 12.10 0.00 35.75 3.53
6676 10205 0.511653 CATCCAGATCAGCGCGATTG 59.488 55.000 12.10 7.63 33.17 2.67
6677 10206 0.390492 TCATCCAGATCAGCGCGATT 59.610 50.000 12.10 0.00 33.17 3.34
6678 10207 0.390492 TTCATCCAGATCAGCGCGAT 59.610 50.000 12.10 0.00 36.91 4.58
6679 10208 0.390492 ATTCATCCAGATCAGCGCGA 59.610 50.000 12.10 2.54 0.00 5.87
6680 10209 0.788995 GATTCATCCAGATCAGCGCG 59.211 55.000 0.00 0.00 0.00 6.86
6681 10210 1.155042 GGATTCATCCAGATCAGCGC 58.845 55.000 0.00 0.00 46.38 5.92
6692 10221 5.522460 CCAAAATCAATGCACAGGATTCATC 59.478 40.000 9.08 0.00 31.26 2.92
6695 10224 4.824289 ACCAAAATCAATGCACAGGATTC 58.176 39.130 9.08 0.00 31.26 2.52
6696 10225 4.283978 TGACCAAAATCAATGCACAGGATT 59.716 37.500 0.00 0.00 32.90 3.01
6698 10227 3.229293 TGACCAAAATCAATGCACAGGA 58.771 40.909 0.00 0.00 0.00 3.86
6699 10228 3.663995 TGACCAAAATCAATGCACAGG 57.336 42.857 0.00 0.00 0.00 4.00
6707 10236 4.099113 TCAGTGTGCATTGACCAAAATCAA 59.901 37.500 0.00 0.00 42.62 2.57
6708 10237 3.635836 TCAGTGTGCATTGACCAAAATCA 59.364 39.130 0.00 0.00 0.00 2.57
6709 10238 4.241590 TCAGTGTGCATTGACCAAAATC 57.758 40.909 0.00 0.00 0.00 2.17
6711 10240 5.069318 TCTATCAGTGTGCATTGACCAAAA 58.931 37.500 0.00 0.00 29.74 2.44
6712 10241 4.650734 TCTATCAGTGTGCATTGACCAAA 58.349 39.130 0.00 0.00 29.74 3.28
6713 10242 4.284829 TCTATCAGTGTGCATTGACCAA 57.715 40.909 0.00 0.00 29.74 3.67
6714 10243 3.979101 TCTATCAGTGTGCATTGACCA 57.021 42.857 0.00 0.00 29.74 4.02
6715 10244 3.375299 GGTTCTATCAGTGTGCATTGACC 59.625 47.826 0.00 0.00 29.74 4.02
6716 10245 3.375299 GGGTTCTATCAGTGTGCATTGAC 59.625 47.826 0.00 0.00 29.74 3.18
6717 10246 3.609853 GGGTTCTATCAGTGTGCATTGA 58.390 45.455 0.00 0.04 0.00 2.57
6719 10248 2.578021 AGGGGTTCTATCAGTGTGCATT 59.422 45.455 0.00 0.00 0.00 3.56
6720 10249 2.092753 CAGGGGTTCTATCAGTGTGCAT 60.093 50.000 0.00 0.00 0.00 3.96
6721 10250 1.278985 CAGGGGTTCTATCAGTGTGCA 59.721 52.381 0.00 0.00 0.00 4.57
6722 10251 2.014068 GCAGGGGTTCTATCAGTGTGC 61.014 57.143 0.00 0.00 0.00 4.57
6723 10252 1.556911 AGCAGGGGTTCTATCAGTGTG 59.443 52.381 0.00 0.00 0.00 3.82
6724 10253 1.958288 AGCAGGGGTTCTATCAGTGT 58.042 50.000 0.00 0.00 0.00 3.55
6726 10255 1.482593 CGAAGCAGGGGTTCTATCAGT 59.517 52.381 6.60 0.00 37.82 3.41
6728 10257 1.568504 ACGAAGCAGGGGTTCTATCA 58.431 50.000 6.60 0.00 37.82 2.15
6729 10258 2.168728 AGAACGAAGCAGGGGTTCTATC 59.831 50.000 9.72 4.83 46.15 2.08
6730 10259 2.188817 AGAACGAAGCAGGGGTTCTAT 58.811 47.619 9.72 0.00 46.15 1.98
6731 10260 1.640917 AGAACGAAGCAGGGGTTCTA 58.359 50.000 9.72 0.00 46.15 2.10
6733 10262 0.321996 AGAGAACGAAGCAGGGGTTC 59.678 55.000 0.00 0.00 40.17 3.62
6734 10263 0.765510 AAGAGAACGAAGCAGGGGTT 59.234 50.000 0.00 0.00 0.00 4.11
6736 10265 0.391793 GGAAGAGAACGAAGCAGGGG 60.392 60.000 0.00 0.00 0.00 4.79
6737 10266 0.391793 GGGAAGAGAACGAAGCAGGG 60.392 60.000 0.00 0.00 0.00 4.45
6740 10269 0.034896 GTGGGGAAGAGAACGAAGCA 59.965 55.000 0.00 0.00 0.00 3.91
6741 10270 0.034896 TGTGGGGAAGAGAACGAAGC 59.965 55.000 0.00 0.00 0.00 3.86
6742 10271 1.070134 TGTGTGGGGAAGAGAACGAAG 59.930 52.381 0.00 0.00 0.00 3.79
6743 10272 1.124780 TGTGTGGGGAAGAGAACGAA 58.875 50.000 0.00 0.00 0.00 3.85
6744 10273 0.391597 GTGTGTGGGGAAGAGAACGA 59.608 55.000 0.00 0.00 0.00 3.85
6746 10275 2.427506 GATGTGTGTGGGGAAGAGAAC 58.572 52.381 0.00 0.00 0.00 3.01
6747 10276 1.001974 CGATGTGTGTGGGGAAGAGAA 59.998 52.381 0.00 0.00 0.00 2.87
6748 10277 0.608130 CGATGTGTGTGGGGAAGAGA 59.392 55.000 0.00 0.00 0.00 3.10
6749 10278 1.021390 GCGATGTGTGTGGGGAAGAG 61.021 60.000 0.00 0.00 0.00 2.85
6750 10279 1.003839 GCGATGTGTGTGGGGAAGA 60.004 57.895 0.00 0.00 0.00 2.87
6751 10280 2.040544 GGCGATGTGTGTGGGGAAG 61.041 63.158 0.00 0.00 0.00 3.46
6752 10281 2.033448 GGCGATGTGTGTGGGGAA 59.967 61.111 0.00 0.00 0.00 3.97
6754 10283 2.436646 GAGGCGATGTGTGTGGGG 60.437 66.667 0.00 0.00 0.00 4.96
6755 10284 1.302431 TTGAGGCGATGTGTGTGGG 60.302 57.895 0.00 0.00 0.00 4.61
6756 10285 1.868997 GTTGAGGCGATGTGTGTGG 59.131 57.895 0.00 0.00 0.00 4.17
6758 10287 2.317609 GCGTTGAGGCGATGTGTGT 61.318 57.895 0.00 0.00 0.00 3.72
6759 10288 2.316867 TGCGTTGAGGCGATGTGTG 61.317 57.895 0.00 0.00 35.06 3.82
6760 10289 2.030412 TGCGTTGAGGCGATGTGT 59.970 55.556 0.00 0.00 35.06 3.72
6761 10290 1.638388 ATGTGCGTTGAGGCGATGTG 61.638 55.000 0.00 0.00 35.06 3.21
6762 10291 0.108377 TATGTGCGTTGAGGCGATGT 60.108 50.000 0.00 0.00 35.06 3.06
6763 10292 0.301687 GTATGTGCGTTGAGGCGATG 59.698 55.000 0.00 0.00 35.06 3.84
6764 10293 0.108377 TGTATGTGCGTTGAGGCGAT 60.108 50.000 0.00 0.00 35.06 4.58
6765 10294 0.735978 CTGTATGTGCGTTGAGGCGA 60.736 55.000 0.00 0.00 35.06 5.54
6766 10295 1.709760 CTGTATGTGCGTTGAGGCG 59.290 57.895 0.00 0.00 35.06 5.52
6767 10296 1.425428 GCTGTATGTGCGTTGAGGC 59.575 57.895 0.00 0.00 0.00 4.70
6768 10297 0.673333 TGGCTGTATGTGCGTTGAGG 60.673 55.000 0.00 0.00 0.00 3.86
6769 10298 0.723414 CTGGCTGTATGTGCGTTGAG 59.277 55.000 0.00 0.00 0.00 3.02
6770 10299 1.298157 GCTGGCTGTATGTGCGTTGA 61.298 55.000 0.00 0.00 0.00 3.18
6771 10300 1.135315 GCTGGCTGTATGTGCGTTG 59.865 57.895 0.00 0.00 0.00 4.10
6775 10304 3.880846 GGCGCTGGCTGTATGTGC 61.881 66.667 7.64 0.00 39.81 4.57
6776 10305 3.204827 GGGCGCTGGCTGTATGTG 61.205 66.667 7.64 0.00 39.81 3.21
6777 10306 3.391665 GAGGGCGCTGGCTGTATGT 62.392 63.158 8.56 0.00 39.81 2.29
6778 10307 2.590007 GAGGGCGCTGGCTGTATG 60.590 66.667 8.56 0.00 39.81 2.39
6802 10798 4.101790 GACCATGTTGTGCCGCGG 62.102 66.667 24.05 24.05 0.00 6.46
6805 10801 2.860293 GTCGACCATGTTGTGCCG 59.140 61.111 3.51 0.00 0.00 5.69
6811 10807 0.033504 ACTGAAGCGTCGACCATGTT 59.966 50.000 10.58 0.00 0.00 2.71
6812 10808 0.667487 CACTGAAGCGTCGACCATGT 60.667 55.000 10.58 0.00 0.00 3.21
6814 10810 1.738099 GCACTGAAGCGTCGACCAT 60.738 57.895 10.58 0.00 0.00 3.55
6823 10819 4.436448 GCGACGCTGCACTGAAGC 62.436 66.667 13.73 0.00 37.31 3.86
6845 10841 3.522731 CAGACGGCGAGAGGAGGG 61.523 72.222 16.62 0.00 0.00 4.30
6857 10853 0.943835 TCGACCATGTTGTGCAGACG 60.944 55.000 0.00 0.00 0.00 4.18
6858 10854 0.512952 GTCGACCATGTTGTGCAGAC 59.487 55.000 3.51 0.00 0.00 3.51
6860 10856 1.492873 CGTCGACCATGTTGTGCAG 59.507 57.895 10.58 0.00 0.00 4.41
6861 10857 2.603247 GCGTCGACCATGTTGTGCA 61.603 57.895 10.58 0.00 0.00 4.57
6862 10858 1.841663 AAGCGTCGACCATGTTGTGC 61.842 55.000 10.58 4.78 0.00 4.57
6863 10859 0.163788 GAAGCGTCGACCATGTTGTG 59.836 55.000 10.58 0.00 0.00 3.33
6864 10860 0.249699 TGAAGCGTCGACCATGTTGT 60.250 50.000 10.58 0.00 0.00 3.32
6865 10861 0.439985 CTGAAGCGTCGACCATGTTG 59.560 55.000 10.58 0.00 0.00 3.33
6867 10863 0.667487 CACTGAAGCGTCGACCATGT 60.667 55.000 10.58 0.00 0.00 3.21
6868 10864 1.959899 GCACTGAAGCGTCGACCATG 61.960 60.000 10.58 0.00 0.00 3.66
6869 10865 1.738099 GCACTGAAGCGTCGACCAT 60.738 57.895 10.58 0.00 0.00 3.55
6870 10866 2.355837 GCACTGAAGCGTCGACCA 60.356 61.111 10.58 0.65 0.00 4.02
6873 10869 2.734723 GCTGCACTGAAGCGTCGA 60.735 61.111 0.00 0.00 37.31 4.20
6926 10922 4.081030 CACTGCACTGAAGCGCGG 62.081 66.667 8.83 0.00 40.48 6.46
6927 10923 2.885676 AACACTGCACTGAAGCGCG 61.886 57.895 0.00 0.00 37.31 6.86
6928 10924 1.369689 CAACACTGCACTGAAGCGC 60.370 57.895 0.00 0.00 37.31 5.92
6929 10925 1.280746 CCAACACTGCACTGAAGCG 59.719 57.895 0.00 0.00 37.31 4.68
6932 10928 1.383456 GGCACCAACACTGCACTGAA 61.383 55.000 0.00 0.00 36.27 3.02
6933 10929 1.823470 GGCACCAACACTGCACTGA 60.823 57.895 0.00 0.00 36.27 3.41
6951 10947 4.838486 GAGGCGCGACGAGTCTGG 62.838 72.222 11.30 0.00 0.00 3.86
6952 10948 4.838486 GGAGGCGCGACGAGTCTG 62.838 72.222 11.30 0.00 0.00 3.51
6965 10961 2.046507 GACAGTGCTGCAGGGAGG 60.047 66.667 17.12 0.00 0.00 4.30
6966 10962 2.433838 CGACAGTGCTGCAGGGAG 60.434 66.667 17.12 0.00 0.00 4.30
6967 10963 3.226429 GACGACAGTGCTGCAGGGA 62.226 63.158 17.12 0.00 0.00 4.20
6968 10964 2.740055 GACGACAGTGCTGCAGGG 60.740 66.667 17.12 0.00 0.00 4.45
6969 10965 3.108289 CGACGACAGTGCTGCAGG 61.108 66.667 17.12 0.37 0.00 4.85
7005 11001 3.618780 GACAGTGCTGCAGGGAGGG 62.619 68.421 17.12 0.00 0.00 4.30
7006 11002 2.046507 GACAGTGCTGCAGGGAGG 60.047 66.667 17.12 0.00 0.00 4.30
7007 11003 2.433838 CGACAGTGCTGCAGGGAG 60.434 66.667 17.12 0.00 0.00 4.30
7008 11004 2.917227 TCGACAGTGCTGCAGGGA 60.917 61.111 17.12 0.00 0.00 4.20
7009 11005 2.740055 GTCGACAGTGCTGCAGGG 60.740 66.667 17.12 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.