Multiple sequence alignment - TraesCS4A01G277000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G277000 chr4A 100.000 4383 0 0 3799 8181 585057409 585061791 0.000000e+00 8094.0
1 TraesCS4A01G277000 chr4A 98.745 2948 37 0 3799 6746 743740870 743737923 0.000000e+00 5240.0
2 TraesCS4A01G277000 chr4A 98.577 2951 41 1 3799 6748 740622301 740625251 0.000000e+00 5216.0
3 TraesCS4A01G277000 chr4A 100.000 1951 0 0 1 1951 585053611 585055561 0.000000e+00 3603.0
4 TraesCS4A01G277000 chr4A 100.000 1446 0 0 2071 3516 585055681 585057126 0.000000e+00 2671.0
5 TraesCS4A01G277000 chr4A 99.239 1446 11 0 2071 3516 508010493 508011938 0.000000e+00 2610.0
6 TraesCS4A01G277000 chr4A 99.240 1447 10 1 2071 3516 724360177 724361623 0.000000e+00 2610.0
7 TraesCS4A01G277000 chr4A 98.760 484 6 0 7698 8181 585077462 585077945 0.000000e+00 861.0
8 TraesCS4A01G277000 chr4A 88.492 252 29 0 6747 6998 585054764 585055015 1.030000e-78 305.0
9 TraesCS4A01G277000 chr4A 88.492 252 29 0 1154 1405 585060357 585060608 1.030000e-78 305.0
10 TraesCS4A01G277000 chr7A 99.051 2949 27 1 3799 6746 701208438 701205490 0.000000e+00 5289.0
11 TraesCS4A01G277000 chr7A 99.170 1446 12 0 2071 3516 560869827 560871272 0.000000e+00 2604.0
12 TraesCS4A01G277000 chr6B 98.951 2956 30 1 3799 6754 205255803 205258757 0.000000e+00 5286.0
13 TraesCS4A01G277000 chr6B 98.677 2948 39 0 3799 6746 85719471 85716524 0.000000e+00 5228.0
14 TraesCS4A01G277000 chr6B 98.643 2948 40 0 3799 6746 276526366 276523419 0.000000e+00 5223.0
15 TraesCS4A01G277000 chr6B 99.308 1446 10 0 2071 3516 89070733 89072178 0.000000e+00 2615.0
16 TraesCS4A01G277000 chr6B 99.239 1446 11 0 2071 3516 174118104 174119549 0.000000e+00 2610.0
17 TraesCS4A01G277000 chr6B 97.552 531 12 1 1422 1951 205253388 205253918 0.000000e+00 907.0
18 TraesCS4A01G277000 chr6B 98.077 520 10 0 1432 1951 85721848 85721329 0.000000e+00 905.0
19 TraesCS4A01G277000 chr6B 97.897 523 11 0 1429 1951 89070313 89070835 0.000000e+00 905.0
20 TraesCS4A01G277000 chr6B 97.885 520 11 0 1432 1951 174117687 174118206 0.000000e+00 900.0
21 TraesCS4A01G277000 chr5A 98.711 2948 38 0 3799 6746 342348133 342345186 0.000000e+00 5234.0
22 TraesCS4A01G277000 chr5A 97.706 523 12 0 1429 1951 55267513 55268035 0.000000e+00 900.0
23 TraesCS4A01G277000 chr5A 97.159 528 15 0 1424 1951 641641801 641642328 0.000000e+00 893.0
24 TraesCS4A01G277000 chr3B 98.711 2948 36 2 3799 6746 187815257 187812312 0.000000e+00 5232.0
25 TraesCS4A01G277000 chr7B 98.611 2951 41 0 3799 6749 178395919 178392969 0.000000e+00 5223.0
26 TraesCS4A01G277000 chr7B 99.239 1446 11 0 2071 3516 677756376 677757821 0.000000e+00 2610.0
27 TraesCS4A01G277000 chr7B 97.885 520 11 0 1432 1951 745768485 745769004 0.000000e+00 900.0
28 TraesCS4A01G277000 chr7B 97.692 520 12 0 1432 1951 164979255 164979774 0.000000e+00 894.0
29 TraesCS4A01G277000 chrUn 99.171 1448 10 1 2071 3516 189212483 189211036 0.000000e+00 2606.0
30 TraesCS4A01G277000 chrUn 89.587 509 34 12 913 1405 382348230 382348735 5.390000e-176 628.0
31 TraesCS4A01G277000 chrUn 87.284 464 53 3 6749 7211 382348487 382348945 7.270000e-145 525.0
32 TraesCS4A01G277000 chrUn 80.812 714 58 28 7301 7968 382348987 382349667 3.430000e-133 486.0
33 TraesCS4A01G277000 chrUn 91.176 68 6 0 7111 7178 8091070 8091137 8.740000e-15 93.5
34 TraesCS4A01G277000 chr2B 99.170 1446 12 0 2071 3516 31451695 31450250 0.000000e+00 2604.0
35 TraesCS4A01G277000 chr2A 99.170 1446 12 0 2071 3516 655880899 655882344 0.000000e+00 2604.0
36 TraesCS4A01G277000 chr1B 97.697 521 12 0 1431 1951 15906542 15907062 0.000000e+00 896.0
37 TraesCS4A01G277000 chr4B 83.047 932 73 31 7301 8181 26017262 26016365 0.000000e+00 767.0
38 TraesCS4A01G277000 chr4B 82.940 932 74 31 7301 8181 26108264 26107367 0.000000e+00 761.0
39 TraesCS4A01G277000 chr4B 82.940 932 74 32 7301 8181 26238358 26237461 0.000000e+00 761.0
40 TraesCS4A01G277000 chr4B 82.814 931 76 31 7301 8181 26196886 26195990 0.000000e+00 756.0
41 TraesCS4A01G277000 chr4B 82.688 930 80 38 7301 8181 26277842 26276945 0.000000e+00 750.0
42 TraesCS4A01G277000 chr4B 82.618 932 76 32 7301 8181 25979399 25978503 0.000000e+00 745.0
43 TraesCS4A01G277000 chr4B 82.403 932 79 31 7301 8181 26154636 26153739 0.000000e+00 734.0
44 TraesCS4A01G277000 chr4B 81.867 932 76 34 7301 8181 26068510 26067621 0.000000e+00 699.0
45 TraesCS4A01G277000 chr4B 90.152 528 39 7 889 1405 26351961 26351436 0.000000e+00 675.0
46 TraesCS4A01G277000 chr4B 90.157 508 33 10 913 1405 26200512 26200007 0.000000e+00 645.0
47 TraesCS4A01G277000 chr4B 90.157 508 33 10 913 1405 26281699 26281194 0.000000e+00 645.0
48 TraesCS4A01G277000 chr4B 89.961 508 34 10 913 1405 26072433 26071928 2.490000e-179 640.0
49 TraesCS4A01G277000 chr4B 89.764 508 35 10 913 1405 26158455 26157950 1.160000e-177 634.0
50 TraesCS4A01G277000 chr4B 89.764 508 35 10 913 1405 26242211 26241706 1.160000e-177 634.0
51 TraesCS4A01G277000 chr4B 87.716 464 51 3 6749 7211 26072176 26071718 3.360000e-148 536.0
52 TraesCS4A01G277000 chr4B 87.288 472 52 5 6749 7217 26351684 26351218 4.350000e-147 532.0
53 TraesCS4A01G277000 chr4B 87.500 464 52 3 6749 7211 25983012 25982554 1.560000e-146 531.0
54 TraesCS4A01G277000 chr4B 84.914 464 49 8 6749 7211 26241954 26241511 4.500000e-122 449.0
55 TraesCS4A01G277000 chr4B 84.698 464 50 8 6749 7211 26158198 26157755 2.100000e-120 444.0
56 TraesCS4A01G277000 chr4B 89.071 366 23 11 913 1263 26108748 26108385 9.750000e-119 438.0
57 TraesCS4A01G277000 chr4B 93.902 246 15 0 1160 1405 25983009 25982764 1.000000e-98 372.0
58 TraesCS4A01G277000 chr4B 92.549 255 14 2 1 252 26353919 26353667 2.170000e-95 361.0
59 TraesCS4A01G277000 chr4B 87.697 317 25 11 245 559 26353627 26353323 2.810000e-94 357.0
60 TraesCS4A01G277000 chr4B 87.857 140 12 2 476 615 26109101 26108967 8.500000e-35 159.0
61 TraesCS4A01G277000 chr4B 87.857 140 12 2 476 615 26158808 26158674 8.500000e-35 159.0
62 TraesCS4A01G277000 chr4B 87.143 140 13 2 476 615 25983286 25983152 3.950000e-33 154.0
63 TraesCS4A01G277000 chr4B 86.429 140 14 3 476 615 26282052 26281918 1.840000e-31 148.0
64 TraesCS4A01G277000 chr4B 89.623 106 10 1 6749 6854 26108491 26108387 5.150000e-27 134.0
65 TraesCS4A01G277000 chr4B 95.312 64 3 0 552 615 26353237 26353174 1.450000e-17 102.0
66 TraesCS4A01G277000 chr4D 86.719 384 34 8 245 615 15534346 15533967 2.130000e-110 411.0
67 TraesCS4A01G277000 chr4D 94.118 204 9 1 1 201 15535836 15535633 2.870000e-79 307.0
68 TraesCS4A01G277000 chr4D 89.375 160 10 4 7065 7218 15533924 15533766 2.330000e-45 195.0
69 TraesCS4A01G277000 chr1D 85.047 107 10 3 7111 7214 460743635 460743738 4.040000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G277000 chr4A 585053611 585061791 8180 False 2995.600000 8094 95.396800 1 8181 5 chr4A.!!$F5 8180
1 TraesCS4A01G277000 chr4A 743737923 743740870 2947 True 5240.000000 5240 98.745000 3799 6746 1 chr4A.!!$R1 2947
2 TraesCS4A01G277000 chr4A 740622301 740625251 2950 False 5216.000000 5216 98.577000 3799 6748 1 chr4A.!!$F4 2949
3 TraesCS4A01G277000 chr4A 508010493 508011938 1445 False 2610.000000 2610 99.239000 2071 3516 1 chr4A.!!$F1 1445
4 TraesCS4A01G277000 chr4A 724360177 724361623 1446 False 2610.000000 2610 99.240000 2071 3516 1 chr4A.!!$F3 1445
5 TraesCS4A01G277000 chr7A 701205490 701208438 2948 True 5289.000000 5289 99.051000 3799 6746 1 chr7A.!!$R1 2947
6 TraesCS4A01G277000 chr7A 560869827 560871272 1445 False 2604.000000 2604 99.170000 2071 3516 1 chr7A.!!$F1 1445
7 TraesCS4A01G277000 chr6B 276523419 276526366 2947 True 5223.000000 5223 98.643000 3799 6746 1 chr6B.!!$R1 2947
8 TraesCS4A01G277000 chr6B 205253388 205258757 5369 False 3096.500000 5286 98.251500 1422 6754 2 chr6B.!!$F3 5332
9 TraesCS4A01G277000 chr6B 85716524 85721848 5324 True 3066.500000 5228 98.377000 1432 6746 2 chr6B.!!$R2 5314
10 TraesCS4A01G277000 chr6B 89070313 89072178 1865 False 1760.000000 2615 98.602500 1429 3516 2 chr6B.!!$F1 2087
11 TraesCS4A01G277000 chr6B 174117687 174119549 1862 False 1755.000000 2610 98.562000 1432 3516 2 chr6B.!!$F2 2084
12 TraesCS4A01G277000 chr5A 342345186 342348133 2947 True 5234.000000 5234 98.711000 3799 6746 1 chr5A.!!$R1 2947
13 TraesCS4A01G277000 chr5A 55267513 55268035 522 False 900.000000 900 97.706000 1429 1951 1 chr5A.!!$F1 522
14 TraesCS4A01G277000 chr5A 641641801 641642328 527 False 893.000000 893 97.159000 1424 1951 1 chr5A.!!$F2 527
15 TraesCS4A01G277000 chr3B 187812312 187815257 2945 True 5232.000000 5232 98.711000 3799 6746 1 chr3B.!!$R1 2947
16 TraesCS4A01G277000 chr7B 178392969 178395919 2950 True 5223.000000 5223 98.611000 3799 6749 1 chr7B.!!$R1 2950
17 TraesCS4A01G277000 chr7B 677756376 677757821 1445 False 2610.000000 2610 99.239000 2071 3516 1 chr7B.!!$F2 1445
18 TraesCS4A01G277000 chr7B 745768485 745769004 519 False 900.000000 900 97.885000 1432 1951 1 chr7B.!!$F3 519
19 TraesCS4A01G277000 chr7B 164979255 164979774 519 False 894.000000 894 97.692000 1432 1951 1 chr7B.!!$F1 519
20 TraesCS4A01G277000 chrUn 189211036 189212483 1447 True 2606.000000 2606 99.171000 2071 3516 1 chrUn.!!$R1 1445
21 TraesCS4A01G277000 chrUn 382348230 382349667 1437 False 546.333333 628 85.894333 913 7968 3 chrUn.!!$F2 7055
22 TraesCS4A01G277000 chr2B 31450250 31451695 1445 True 2604.000000 2604 99.170000 2071 3516 1 chr2B.!!$R1 1445
23 TraesCS4A01G277000 chr2A 655880899 655882344 1445 False 2604.000000 2604 99.170000 2071 3516 1 chr2A.!!$F1 1445
24 TraesCS4A01G277000 chr1B 15906542 15907062 520 False 896.000000 896 97.697000 1431 1951 1 chr1B.!!$F1 520
25 TraesCS4A01G277000 chr4B 26016365 26017262 897 True 767.000000 767 83.047000 7301 8181 1 chr4B.!!$R1 880
26 TraesCS4A01G277000 chr4B 26195990 26200512 4522 True 700.500000 756 86.485500 913 8181 2 chr4B.!!$R6 7268
27 TraesCS4A01G277000 chr4B 26067621 26072433 4812 True 625.000000 699 86.514667 913 8181 3 chr4B.!!$R3 7268
28 TraesCS4A01G277000 chr4B 26237461 26242211 4750 True 614.666667 761 85.872667 913 8181 3 chr4B.!!$R7 7268
29 TraesCS4A01G277000 chr4B 26276945 26282052 5107 True 514.333333 750 86.424667 476 8181 3 chr4B.!!$R8 7705
30 TraesCS4A01G277000 chr4B 26153739 26158808 5069 True 492.750000 734 86.180500 476 8181 4 chr4B.!!$R5 7705
31 TraesCS4A01G277000 chr4B 25978503 25983286 4783 True 450.500000 745 87.790750 476 8181 4 chr4B.!!$R2 7705
32 TraesCS4A01G277000 chr4B 26351218 26353919 2701 True 405.400000 675 90.599600 1 7217 5 chr4B.!!$R9 7216
33 TraesCS4A01G277000 chr4B 26107367 26109101 1734 True 373.000000 761 87.372750 476 8181 4 chr4B.!!$R4 7705
34 TraesCS4A01G277000 chr4D 15533766 15535836 2070 True 304.333333 411 90.070667 1 7218 3 chr4D.!!$R1 7217

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
736 3023 0.112606 ACACCGGAGAGAGGAACTGA 59.887 55.000 9.46 0.0 41.55 3.41 F
1009 3351 0.109597 GTGAGCAGCAATGGGTTTCG 60.110 55.000 0.00 0.0 0.00 3.46 F
1311 3665 0.966370 AAGACCCGACGAGGAAGGAG 60.966 60.000 9.04 0.0 45.00 3.69 F
2672 5248 1.345741 TGGAGAGTGTCAGAAGCTTGG 59.654 52.381 2.10 0.0 0.00 3.61 F
3981 6792 4.299586 TGGAATGATGCTTTCACCACTA 57.700 40.909 0.00 0.0 37.11 2.74 F
4285 7097 1.133513 TGCCAAACTTCCTGTGTCCAT 60.134 47.619 0.00 0.0 0.00 3.41 F
5184 7996 1.185618 TCTCGTTCCTCCACCACCAG 61.186 60.000 0.00 0.0 0.00 4.00 F
6763 9576 0.110509 CACAGAGCAACGACATGTGC 60.111 55.000 1.15 0.0 35.35 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2672 5248 0.952984 GAACTCAGTGGCAGTGGAGC 60.953 60.000 21.53 6.13 0.00 4.70 R
3015 5593 1.436336 CGGTAAGGTCGCAGTAGGG 59.564 63.158 0.00 0.00 0.00 3.53 R
3049 5628 1.066257 CACAAAGCTGGCACACACC 59.934 57.895 0.00 0.00 0.00 4.16 R
4285 7097 1.608025 GCAGAGATGGTGGTTCGACAA 60.608 52.381 0.00 0.00 0.00 3.18 R
5826 8638 1.607148 GCCCGCTCTTTGTAACAACTT 59.393 47.619 0.00 0.00 0.00 2.66 R
6323 9135 3.209410 CAACTCCTGAAGCAAAGACTGT 58.791 45.455 0.00 0.00 0.00 3.55 R
6767 9580 0.033601 TGGTGGTGTTGGCACTTCTT 60.034 50.000 0.00 0.00 44.65 2.52 R
7679 19903 0.171455 GTACAGTGGAGTCTCTGGCG 59.829 60.000 15.99 0.00 38.44 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 58 0.762418 TGTCCTCCTTTTCTCGCCAA 59.238 50.000 0.00 0.00 0.00 4.52
94 98 4.647611 TCTCGGAAATTGGTTTTAGCTCA 58.352 39.130 0.00 0.00 0.00 4.26
333 1584 8.067189 ACATGTGTGTTTGTTTTTGTCTTTTTC 58.933 29.630 0.00 0.00 34.01 2.29
382 1633 9.634163 AAATTTTAAAATTATCGGACTCCACAC 57.366 29.630 23.01 0.00 37.62 3.82
389 1640 3.311110 GGACTCCACACAGCCCGA 61.311 66.667 0.00 0.00 0.00 5.14
405 1656 1.065126 CCCGAGAGCCAAAAATCCTCT 60.065 52.381 0.00 0.00 38.58 3.69
480 1741 6.348540 CCCTCGTGTTCTCTTAAGAAAAATGG 60.349 42.308 6.63 2.33 43.04 3.16
550 1906 1.153449 CACTCAGCCGGCGGATTAA 60.153 57.895 33.44 13.48 0.00 1.40
615 1972 3.345808 CGTCCGTGGCAGGTGTTG 61.346 66.667 6.43 0.00 0.00 3.33
617 1974 4.263572 TCCGTGGCAGGTGTTGGG 62.264 66.667 6.43 0.00 0.00 4.12
619 1976 2.203280 CGTGGCAGGTGTTGGGAA 60.203 61.111 0.00 0.00 0.00 3.97
620 1977 2.551912 CGTGGCAGGTGTTGGGAAC 61.552 63.158 0.00 0.00 0.00 3.62
621 1978 1.454847 GTGGCAGGTGTTGGGAACA 60.455 57.895 0.00 0.00 39.52 3.18
629 2006 1.524961 TGTTGGGAACACGTCTGCT 59.475 52.632 0.00 0.00 42.67 4.24
636 2013 1.004918 AACACGTCTGCTAGGGCAC 60.005 57.895 0.00 0.00 44.28 5.01
638 2015 4.436998 ACGTCTGCTAGGGCACGC 62.437 66.667 0.00 0.00 44.28 5.34
654 2031 2.426183 CGCGACAGACCGACGAAAG 61.426 63.158 0.00 0.00 34.56 2.62
661 2038 1.080025 GACCGACGAAAGGGGACTG 60.080 63.158 0.00 0.00 42.68 3.51
679 2966 2.290323 ACTGCTCGTCCAAAATTAGCCT 60.290 45.455 0.00 0.00 32.14 4.58
693 2980 4.221422 GCCTCCAGCGCATCCGTA 62.221 66.667 11.47 0.00 36.67 4.02
715 3002 3.615849 GCATTAGAGCCAAAATCTCCG 57.384 47.619 0.00 0.00 0.00 4.63
716 3003 2.945668 GCATTAGAGCCAAAATCTCCGT 59.054 45.455 0.00 0.00 0.00 4.69
717 3004 4.127171 GCATTAGAGCCAAAATCTCCGTA 58.873 43.478 0.00 0.00 0.00 4.02
718 3005 4.024809 GCATTAGAGCCAAAATCTCCGTAC 60.025 45.833 0.00 0.00 0.00 3.67
719 3006 4.811969 TTAGAGCCAAAATCTCCGTACA 57.188 40.909 0.00 0.00 0.00 2.90
720 3007 2.973945 AGAGCCAAAATCTCCGTACAC 58.026 47.619 0.00 0.00 0.00 2.90
721 3008 2.007608 GAGCCAAAATCTCCGTACACC 58.992 52.381 0.00 0.00 0.00 4.16
722 3009 0.725117 GCCAAAATCTCCGTACACCG 59.275 55.000 0.00 0.00 0.00 4.94
731 3018 4.631773 CGTACACCGGAGAGAGGA 57.368 61.111 9.46 0.00 0.00 3.71
732 3019 2.864114 CGTACACCGGAGAGAGGAA 58.136 57.895 9.46 0.00 0.00 3.36
733 3020 0.450983 CGTACACCGGAGAGAGGAAC 59.549 60.000 9.46 0.00 0.00 3.62
735 3022 1.473278 GTACACCGGAGAGAGGAACTG 59.527 57.143 9.46 0.00 41.55 3.16
736 3023 0.112606 ACACCGGAGAGAGGAACTGA 59.887 55.000 9.46 0.00 41.55 3.41
737 3024 0.814457 CACCGGAGAGAGGAACTGAG 59.186 60.000 9.46 0.00 41.55 3.35
738 3025 0.968393 ACCGGAGAGAGGAACTGAGC 60.968 60.000 9.46 0.00 41.55 4.26
739 3026 1.431440 CGGAGAGAGGAACTGAGCG 59.569 63.158 0.00 0.00 41.55 5.03
740 3027 1.027255 CGGAGAGAGGAACTGAGCGA 61.027 60.000 0.00 0.00 41.55 4.93
741 3028 0.738389 GGAGAGAGGAACTGAGCGAG 59.262 60.000 0.00 0.00 41.55 5.03
742 3029 1.459450 GAGAGAGGAACTGAGCGAGT 58.541 55.000 0.00 0.00 41.55 4.18
743 3030 2.634600 GAGAGAGGAACTGAGCGAGTA 58.365 52.381 0.00 0.00 41.55 2.59
744 3031 2.353579 GAGAGAGGAACTGAGCGAGTAC 59.646 54.545 0.00 0.00 41.55 2.73
745 3032 2.026636 AGAGAGGAACTGAGCGAGTACT 60.027 50.000 0.00 0.00 41.55 2.73
746 3033 3.198200 AGAGAGGAACTGAGCGAGTACTA 59.802 47.826 0.00 0.00 41.55 1.82
747 3034 4.131596 GAGAGGAACTGAGCGAGTACTAT 58.868 47.826 0.00 0.00 41.55 2.12
748 3035 5.070714 AGAGAGGAACTGAGCGAGTACTATA 59.929 44.000 0.00 0.00 41.55 1.31
749 3036 5.302360 AGAGGAACTGAGCGAGTACTATAG 58.698 45.833 0.00 0.00 41.55 1.31
750 3037 5.070714 AGAGGAACTGAGCGAGTACTATAGA 59.929 44.000 6.78 0.00 41.55 1.98
751 3038 5.058490 AGGAACTGAGCGAGTACTATAGAC 58.942 45.833 6.78 0.59 37.18 2.59
769 3056 2.946329 AGACTATAGTGCTCCTCGTGTG 59.054 50.000 10.90 0.00 0.00 3.82
814 3101 1.283029 CCTCCACTCCACATGGTTCAT 59.717 52.381 0.00 0.00 38.47 2.57
815 3102 2.362736 CTCCACTCCACATGGTTCATG 58.637 52.381 6.37 6.37 46.18 3.07
816 3103 1.004628 TCCACTCCACATGGTTCATGG 59.995 52.381 11.85 0.00 45.16 3.66
820 3107 1.679680 CTCCACATGGTTCATGGCATC 59.320 52.381 11.85 0.00 45.16 3.91
821 3108 1.005687 TCCACATGGTTCATGGCATCA 59.994 47.619 11.85 0.00 45.16 3.07
822 3109 1.826096 CCACATGGTTCATGGCATCAA 59.174 47.619 11.85 0.00 45.16 2.57
823 3110 2.432874 CCACATGGTTCATGGCATCAAT 59.567 45.455 11.85 0.00 45.16 2.57
824 3111 3.637694 CCACATGGTTCATGGCATCAATA 59.362 43.478 11.85 0.00 45.16 1.90
826 3113 5.286438 CACATGGTTCATGGCATCAATAAG 58.714 41.667 11.85 0.00 45.16 1.73
827 3114 4.202182 ACATGGTTCATGGCATCAATAAGC 60.202 41.667 11.85 0.53 45.16 3.09
828 3115 3.363627 TGGTTCATGGCATCAATAAGCA 58.636 40.909 0.00 3.25 31.35 3.91
829 3116 3.382227 TGGTTCATGGCATCAATAAGCAG 59.618 43.478 0.00 0.00 30.76 4.24
830 3117 3.243636 GGTTCATGGCATCAATAAGCAGG 60.244 47.826 0.00 0.00 0.00 4.85
831 3118 2.589720 TCATGGCATCAATAAGCAGGG 58.410 47.619 0.00 0.00 0.00 4.45
833 3120 0.756442 TGGCATCAATAAGCAGGGGC 60.756 55.000 0.00 0.00 41.61 5.80
858 3165 2.125106 AACCTCGCGAAGATGCCC 60.125 61.111 12.53 0.00 0.00 5.36
865 3172 2.279784 CGAAGATGCCCGCCTCTC 60.280 66.667 0.00 0.00 0.00 3.20
877 3184 2.423898 GCCTCTCCCCGATCGTGAA 61.424 63.158 15.09 0.00 0.00 3.18
900 3207 0.389948 CCGGCCGGATAGATTACTGC 60.390 60.000 41.82 0.00 37.50 4.40
902 3209 0.601558 GGCCGGATAGATTACTGCGA 59.398 55.000 5.05 0.00 0.00 5.10
905 3212 3.489398 GGCCGGATAGATTACTGCGATAG 60.489 52.174 5.05 0.00 0.00 2.08
908 3215 5.163683 GCCGGATAGATTACTGCGATAGTTA 60.164 44.000 5.05 0.00 40.89 2.24
909 3216 6.459848 GCCGGATAGATTACTGCGATAGTTAT 60.460 42.308 5.05 0.00 40.89 1.89
910 3217 7.255035 GCCGGATAGATTACTGCGATAGTTATA 60.255 40.741 5.05 0.00 40.89 0.98
941 3282 2.803852 CGTGTGTATATAAAGGCCGGCA 60.804 50.000 30.85 7.96 0.00 5.69
973 3314 2.023695 AGTTCTCCCATCCATTGCCATT 60.024 45.455 0.00 0.00 0.00 3.16
974 3315 2.076207 TCTCCCATCCATTGCCATTG 57.924 50.000 0.00 0.00 0.00 2.82
975 3316 1.288633 TCTCCCATCCATTGCCATTGT 59.711 47.619 0.00 0.00 0.00 2.71
976 3317 1.684983 CTCCCATCCATTGCCATTGTC 59.315 52.381 0.00 0.00 0.00 3.18
977 3318 1.006878 TCCCATCCATTGCCATTGTCA 59.993 47.619 0.00 0.00 0.00 3.58
980 3321 2.036733 CCATCCATTGCCATTGTCATCC 59.963 50.000 0.00 0.00 0.00 3.51
987 3329 3.204306 TGCCATTGTCATCCATCTCTC 57.796 47.619 0.00 0.00 0.00 3.20
1005 3347 1.968017 CGTGTGAGCAGCAATGGGT 60.968 57.895 0.00 0.00 0.00 4.51
1009 3351 0.109597 GTGAGCAGCAATGGGTTTCG 60.110 55.000 0.00 0.00 0.00 3.46
1135 3486 1.755008 GAGGTGGAGGAGGAGGTCG 60.755 68.421 0.00 0.00 0.00 4.79
1137 3488 3.462678 GTGGAGGAGGAGGTCGGC 61.463 72.222 0.00 0.00 0.00 5.54
1157 3508 3.499737 GCGCGTTGATGGTCAGGG 61.500 66.667 8.43 0.00 0.00 4.45
1158 3509 3.499737 CGCGTTGATGGTCAGGGC 61.500 66.667 0.00 0.00 0.00 5.19
1174 3528 3.028019 GCAACGACTCGTGCGACA 61.028 61.111 4.50 0.00 39.99 4.35
1248 3602 1.524002 CCACAGTCGGGAGCATCAT 59.476 57.895 0.00 0.00 36.25 2.45
1286 3640 1.507174 GCGAGACGAAGTGTAGCCT 59.493 57.895 0.00 0.00 45.77 4.58
1311 3665 0.966370 AAGACCCGACGAGGAAGGAG 60.966 60.000 9.04 0.00 45.00 3.69
1388 3742 4.308458 CGTCAACGAGCACCCCCA 62.308 66.667 0.00 0.00 43.02 4.96
1389 3743 2.668550 GTCAACGAGCACCCCCAC 60.669 66.667 0.00 0.00 0.00 4.61
1390 3744 4.308458 TCAACGAGCACCCCCACG 62.308 66.667 0.00 0.00 0.00 4.94
1404 3758 3.465403 CACGCCCAGGAGGAGGAG 61.465 72.222 0.00 0.00 40.38 3.69
1410 3764 4.787280 CAGGAGGAGGAGCCCGGT 62.787 72.222 0.00 0.00 37.37 5.28
1411 3765 4.467107 AGGAGGAGGAGCCCGGTC 62.467 72.222 0.00 0.00 37.37 4.79
1869 4223 4.803426 GTCGTCCTGCCGCTCCTG 62.803 72.222 0.00 0.00 0.00 3.86
2457 5033 3.479269 GTAGACAGCGTGCACGGC 61.479 66.667 37.47 28.57 40.23 5.68
2672 5248 1.345741 TGGAGAGTGTCAGAAGCTTGG 59.654 52.381 2.10 0.00 0.00 3.61
3981 6792 4.299586 TGGAATGATGCTTTCACCACTA 57.700 40.909 0.00 0.00 37.11 2.74
4161 6973 8.938906 AGTTTCGTTCTAAGAAGTGTGTTTTTA 58.061 29.630 0.00 0.00 0.00 1.52
4285 7097 1.133513 TGCCAAACTTCCTGTGTCCAT 60.134 47.619 0.00 0.00 0.00 3.41
5004 7816 5.543790 AGTGGCATTTTCAAACCTAAGGAAT 59.456 36.000 0.00 0.00 0.00 3.01
5184 7996 1.185618 TCTCGTTCCTCCACCACCAG 61.186 60.000 0.00 0.00 0.00 4.00
5494 8306 5.492895 TCCTGATCGTCCTGACTATATCTC 58.507 45.833 0.00 0.00 0.00 2.75
5826 8638 2.891580 ACGCAGAAGAAGTACTCCTTGA 59.108 45.455 0.00 0.00 32.03 3.02
6323 9135 5.130311 TGCTACTGCAGAGATTATTTGGGTA 59.870 40.000 23.35 0.00 45.31 3.69
6406 9218 5.347620 AACATCGGTGCTACATACCTTTA 57.652 39.130 0.00 0.00 36.03 1.85
6447 9259 2.541999 GCCCGAACGAAACACATTGAAA 60.542 45.455 0.00 0.00 0.00 2.69
6544 9356 3.683365 TGCAGACATCTTCACTAAGCA 57.317 42.857 0.00 0.00 32.36 3.91
6749 9562 7.039363 CCCCCAAATTTTATTGTCTTACACAGA 60.039 37.037 0.00 0.00 35.97 3.41
6750 9563 8.028938 CCCCAAATTTTATTGTCTTACACAGAG 58.971 37.037 0.00 0.00 35.97 3.35
6751 9564 7.542130 CCCAAATTTTATTGTCTTACACAGAGC 59.458 37.037 0.00 0.00 35.97 4.09
6753 9566 9.462174 CAAATTTTATTGTCTTACACAGAGCAA 57.538 29.630 0.00 0.00 35.97 3.91
6754 9567 9.463443 AAATTTTATTGTCTTACACAGAGCAAC 57.537 29.630 0.00 0.00 35.97 4.17
6755 9568 5.839262 TTATTGTCTTACACAGAGCAACG 57.161 39.130 0.00 0.00 35.97 4.10
6756 9569 3.446310 TTGTCTTACACAGAGCAACGA 57.554 42.857 0.00 0.00 35.97 3.85
6757 9570 2.739292 TGTCTTACACAGAGCAACGAC 58.261 47.619 0.00 0.00 29.34 4.34
6758 9571 2.100087 TGTCTTACACAGAGCAACGACA 59.900 45.455 0.00 0.00 29.34 4.35
6759 9572 3.243737 TGTCTTACACAGAGCAACGACAT 60.244 43.478 0.00 0.00 29.34 3.06
6760 9573 3.121944 GTCTTACACAGAGCAACGACATG 59.878 47.826 0.00 0.00 29.34 3.21
6761 9574 2.812358 TACACAGAGCAACGACATGT 57.188 45.000 0.00 0.00 0.00 3.21
6762 9575 1.220529 ACACAGAGCAACGACATGTG 58.779 50.000 1.15 0.00 45.22 3.21
6763 9576 0.110509 CACAGAGCAACGACATGTGC 60.111 55.000 1.15 0.00 35.35 4.57
6764 9577 1.131218 CAGAGCAACGACATGTGCG 59.869 57.895 1.15 9.63 32.22 5.34
6765 9578 1.006220 AGAGCAACGACATGTGCGA 60.006 52.632 19.74 0.00 32.22 5.10
6766 9579 1.130613 GAGCAACGACATGTGCGAC 59.869 57.895 19.74 11.06 32.22 5.19
6767 9580 1.556591 GAGCAACGACATGTGCGACA 61.557 55.000 19.74 0.00 32.22 4.35
6768 9581 1.157257 AGCAACGACATGTGCGACAA 61.157 50.000 19.74 0.00 32.22 3.18
6769 9582 0.722469 GCAACGACATGTGCGACAAG 60.722 55.000 19.74 9.99 0.00 3.16
6770 9583 0.858583 CAACGACATGTGCGACAAGA 59.141 50.000 19.74 0.00 0.00 3.02
6771 9584 1.260297 CAACGACATGTGCGACAAGAA 59.740 47.619 19.74 0.00 0.00 2.52
6772 9585 1.139989 ACGACATGTGCGACAAGAAG 58.860 50.000 19.74 0.00 0.00 2.85
6773 9586 1.139989 CGACATGTGCGACAAGAAGT 58.860 50.000 1.15 0.00 0.00 3.01
6774 9587 1.136529 CGACATGTGCGACAAGAAGTG 60.137 52.381 1.15 0.00 0.00 3.16
6775 9588 0.588252 ACATGTGCGACAAGAAGTGC 59.412 50.000 0.00 0.00 0.00 4.40
6776 9589 0.110056 CATGTGCGACAAGAAGTGCC 60.110 55.000 0.00 0.00 0.00 5.01
6777 9590 0.534877 ATGTGCGACAAGAAGTGCCA 60.535 50.000 0.00 0.00 0.00 4.92
6778 9591 0.746204 TGTGCGACAAGAAGTGCCAA 60.746 50.000 0.00 0.00 0.00 4.52
6779 9592 0.317020 GTGCGACAAGAAGTGCCAAC 60.317 55.000 0.00 0.00 0.00 3.77
6780 9593 0.746204 TGCGACAAGAAGTGCCAACA 60.746 50.000 0.00 0.00 0.00 3.33
6789 9602 3.933515 GTGCCAACACCACCAAGT 58.066 55.556 0.00 0.00 41.21 3.16
6790 9603 2.198183 GTGCCAACACCACCAAGTT 58.802 52.632 0.00 0.00 41.21 2.66
6791 9604 0.102300 GTGCCAACACCACCAAGTTC 59.898 55.000 0.00 0.00 41.21 3.01
6792 9605 1.040339 TGCCAACACCACCAAGTTCC 61.040 55.000 0.00 0.00 0.00 3.62
6793 9606 2.029743 CCAACACCACCAAGTTCCG 58.970 57.895 0.00 0.00 0.00 4.30
6794 9607 1.452145 CCAACACCACCAAGTTCCGG 61.452 60.000 0.00 0.00 0.00 5.14
6795 9608 1.826487 AACACCACCAAGTTCCGGC 60.826 57.895 0.00 0.00 0.00 6.13
6796 9609 2.983592 CACCACCAAGTTCCGGCC 60.984 66.667 0.00 0.00 0.00 6.13
6797 9610 3.494254 ACCACCAAGTTCCGGCCA 61.494 61.111 2.24 0.00 0.00 5.36
6798 9611 2.672996 CCACCAAGTTCCGGCCAG 60.673 66.667 2.24 0.00 0.00 4.85
6799 9612 2.672996 CACCAAGTTCCGGCCAGG 60.673 66.667 2.24 5.27 42.97 4.45
6808 9621 2.964978 CCGGCCAGGAAAAAGCAG 59.035 61.111 2.24 0.00 45.00 4.24
6809 9622 1.903404 CCGGCCAGGAAAAAGCAGT 60.903 57.895 2.24 0.00 45.00 4.40
6810 9623 1.286880 CGGCCAGGAAAAAGCAGTG 59.713 57.895 2.24 0.00 0.00 3.66
6811 9624 1.005748 GGCCAGGAAAAAGCAGTGC 60.006 57.895 7.13 7.13 0.00 4.40
6812 9625 1.372128 GCCAGGAAAAAGCAGTGCG 60.372 57.895 10.00 0.00 0.00 5.34
6813 9626 2.032981 CCAGGAAAAAGCAGTGCGT 58.967 52.632 10.00 2.83 0.00 5.24
6814 9627 0.040067 CCAGGAAAAAGCAGTGCGTC 60.040 55.000 10.00 6.06 0.00 5.19
6815 9628 0.384725 CAGGAAAAAGCAGTGCGTCG 60.385 55.000 10.00 0.00 0.00 5.12
6816 9629 0.531974 AGGAAAAAGCAGTGCGTCGA 60.532 50.000 10.00 0.00 0.00 4.20
6817 9630 0.384353 GGAAAAAGCAGTGCGTCGAC 60.384 55.000 10.00 5.18 0.00 4.20
6818 9631 0.718220 GAAAAAGCAGTGCGTCGACG 60.718 55.000 32.57 32.57 43.27 5.12
6819 9632 1.149361 AAAAAGCAGTGCGTCGACGA 61.149 50.000 39.74 22.22 43.02 4.20
6820 9633 1.548973 AAAAGCAGTGCGTCGACGAG 61.549 55.000 39.74 24.96 43.02 4.18
6821 9634 2.679132 AAAGCAGTGCGTCGACGAGT 62.679 55.000 39.74 23.60 43.02 4.18
6822 9635 3.461982 GCAGTGCGTCGACGAGTG 61.462 66.667 39.74 31.72 43.02 3.51
6823 9636 3.461982 CAGTGCGTCGACGAGTGC 61.462 66.667 39.74 22.73 43.02 4.40
6824 9637 4.702081 AGTGCGTCGACGAGTGCC 62.702 66.667 39.74 22.25 43.02 5.01
6825 9638 4.994201 GTGCGTCGACGAGTGCCA 62.994 66.667 39.74 24.58 43.02 4.92
6826 9639 4.994201 TGCGTCGACGAGTGCCAC 62.994 66.667 39.74 20.80 43.02 5.01
6827 9640 4.994201 GCGTCGACGAGTGCCACA 62.994 66.667 39.74 0.00 43.02 4.17
6828 9641 2.801162 CGTCGACGAGTGCCACAG 60.801 66.667 33.35 0.00 43.02 3.66
6829 9642 3.106407 GTCGACGAGTGCCACAGC 61.106 66.667 0.00 0.00 40.48 4.40
6830 9643 4.357947 TCGACGAGTGCCACAGCC 62.358 66.667 0.00 0.00 38.69 4.85
6835 9648 4.767255 GAGTGCCACAGCCGGGAG 62.767 72.222 2.18 0.00 38.69 4.30
6849 9662 2.190578 GGAGCATCGTCCCCCAAG 59.809 66.667 0.00 0.00 34.37 3.61
6850 9663 2.514824 GAGCATCGTCCCCCAAGC 60.515 66.667 0.00 0.00 0.00 4.01
6851 9664 3.329542 GAGCATCGTCCCCCAAGCA 62.330 63.158 0.00 0.00 0.00 3.91
6852 9665 2.825836 GCATCGTCCCCCAAGCAG 60.826 66.667 0.00 0.00 0.00 4.24
6853 9666 2.989639 CATCGTCCCCCAAGCAGA 59.010 61.111 0.00 0.00 0.00 4.26
6854 9667 1.299648 CATCGTCCCCCAAGCAGAA 59.700 57.895 0.00 0.00 0.00 3.02
6855 9668 0.322456 CATCGTCCCCCAAGCAGAAA 60.322 55.000 0.00 0.00 0.00 2.52
6856 9669 0.035056 ATCGTCCCCCAAGCAGAAAG 60.035 55.000 0.00 0.00 0.00 2.62
6857 9670 1.073199 CGTCCCCCAAGCAGAAAGT 59.927 57.895 0.00 0.00 0.00 2.66
6858 9671 0.955919 CGTCCCCCAAGCAGAAAGTC 60.956 60.000 0.00 0.00 0.00 3.01
6859 9672 0.402121 GTCCCCCAAGCAGAAAGTCT 59.598 55.000 0.00 0.00 0.00 3.24
6860 9673 1.149101 TCCCCCAAGCAGAAAGTCTT 58.851 50.000 0.00 0.00 0.00 3.01
6861 9674 1.202927 TCCCCCAAGCAGAAAGTCTTG 60.203 52.381 0.00 0.00 39.38 3.02
6862 9675 0.600057 CCCCAAGCAGAAAGTCTTGC 59.400 55.000 0.00 0.00 38.59 4.01
6863 9676 0.239347 CCCAAGCAGAAAGTCTTGCG 59.761 55.000 0.00 0.00 38.59 4.85
6864 9677 1.229428 CCAAGCAGAAAGTCTTGCGA 58.771 50.000 0.00 0.00 38.59 5.10
6865 9678 1.196354 CCAAGCAGAAAGTCTTGCGAG 59.804 52.381 0.00 0.00 38.59 5.03
6866 9679 2.138320 CAAGCAGAAAGTCTTGCGAGA 58.862 47.619 0.00 0.00 34.12 4.04
6874 9687 3.290776 GTCTTGCGAGACCAAGTGT 57.709 52.632 21.79 0.00 45.34 3.55
6875 9688 2.433868 GTCTTGCGAGACCAAGTGTA 57.566 50.000 21.79 0.00 45.34 2.90
6876 9689 2.329379 GTCTTGCGAGACCAAGTGTAG 58.671 52.381 21.79 0.00 45.34 2.74
6877 9690 1.071605 CTTGCGAGACCAAGTGTAGC 58.928 55.000 0.00 0.00 37.89 3.58
6878 9691 0.320421 TTGCGAGACCAAGTGTAGCC 60.320 55.000 0.00 0.00 0.00 3.93
6879 9692 1.292223 GCGAGACCAAGTGTAGCCA 59.708 57.895 0.00 0.00 0.00 4.75
6880 9693 1.014564 GCGAGACCAAGTGTAGCCAC 61.015 60.000 0.00 0.00 42.17 5.01
6890 9703 0.535797 GTGTAGCCACTGGGTAGACC 59.464 60.000 19.36 5.20 41.90 3.85
6900 9713 4.326255 GGTAGACCCGACGAGGAA 57.674 61.111 9.04 0.00 45.00 3.36
6901 9714 2.105124 GGTAGACCCGACGAGGAAG 58.895 63.158 9.04 0.00 45.00 3.46
6902 9715 1.382692 GGTAGACCCGACGAGGAAGG 61.383 65.000 9.04 0.00 45.00 3.46
6903 9716 0.393537 GTAGACCCGACGAGGAAGGA 60.394 60.000 9.04 0.00 45.00 3.36
6904 9717 0.107312 TAGACCCGACGAGGAAGGAG 60.107 60.000 9.04 0.00 45.00 3.69
6905 9718 3.066233 GACCCGACGAGGAAGGAGC 62.066 68.421 9.04 0.00 45.00 4.70
6906 9719 3.068691 CCCGACGAGGAAGGAGCA 61.069 66.667 0.00 0.00 45.00 4.26
6907 9720 2.492090 CCGACGAGGAAGGAGCAG 59.508 66.667 0.00 0.00 45.00 4.24
6908 9721 2.344203 CCGACGAGGAAGGAGCAGT 61.344 63.158 0.00 0.00 45.00 4.40
6909 9722 1.153939 CGACGAGGAAGGAGCAGTG 60.154 63.158 0.00 0.00 0.00 3.66
6910 9723 1.446966 GACGAGGAAGGAGCAGTGC 60.447 63.158 7.13 7.13 0.00 4.40
6911 9724 2.507992 CGAGGAAGGAGCAGTGCG 60.508 66.667 10.00 0.00 0.00 5.34
6912 9725 2.659610 GAGGAAGGAGCAGTGCGT 59.340 61.111 10.00 0.00 0.00 5.24
6913 9726 1.739562 GAGGAAGGAGCAGTGCGTG 60.740 63.158 10.00 0.00 0.00 5.34
6932 9745 3.715839 CAATACTGCATGCGCTACG 57.284 52.632 14.09 0.00 39.64 3.51
6933 9746 0.233074 CAATACTGCATGCGCTACGG 59.767 55.000 14.09 5.51 39.64 4.02
6934 9747 1.498865 AATACTGCATGCGCTACGGC 61.499 55.000 14.09 7.61 39.64 5.68
6939 9752 2.963854 CATGCGCTACGGCCTCAG 60.964 66.667 9.73 0.00 34.44 3.35
6940 9753 4.899239 ATGCGCTACGGCCTCAGC 62.899 66.667 9.73 13.92 38.76 4.26
6950 9763 3.207669 GCCTCAGCCTCAATGCCG 61.208 66.667 0.00 0.00 0.00 5.69
6951 9764 2.515523 CCTCAGCCTCAATGCCGG 60.516 66.667 0.00 0.00 0.00 6.13
6952 9765 3.207669 CTCAGCCTCAATGCCGGC 61.208 66.667 22.73 22.73 46.65 6.13
7004 9817 2.364448 AAGAGGAGGAGGTCGCCC 60.364 66.667 0.00 0.00 35.80 6.13
7044 9857 4.767255 CCGCCTGTCCTGCCAGAC 62.767 72.222 0.00 0.00 34.23 3.51
7082 9895 0.036010 AGATCGGACCAAGCACCAAG 60.036 55.000 0.00 0.00 0.00 3.61
7181 9994 0.249615 CATCATCGAGGCGGTGTGAT 60.250 55.000 0.00 0.00 39.21 3.06
7212 10031 5.900339 CGTCACGCACCTAATAATAATGT 57.100 39.130 0.00 0.00 0.00 2.71
7213 10032 6.996562 CGTCACGCACCTAATAATAATGTA 57.003 37.500 0.00 0.00 0.00 2.29
7214 10033 7.576750 CGTCACGCACCTAATAATAATGTAT 57.423 36.000 0.00 0.00 0.00 2.29
7216 10035 9.131416 CGTCACGCACCTAATAATAATGTATAA 57.869 33.333 0.00 0.00 0.00 0.98
7218 10037 9.647797 TCACGCACCTAATAATAATGTATAAGG 57.352 33.333 0.00 0.00 0.00 2.69
7219 10038 8.879759 CACGCACCTAATAATAATGTATAAGGG 58.120 37.037 0.00 0.00 0.00 3.95
7220 10039 7.551617 ACGCACCTAATAATAATGTATAAGGGC 59.448 37.037 0.00 0.00 0.00 5.19
7221 10040 7.254319 CGCACCTAATAATAATGTATAAGGGCG 60.254 40.741 0.00 0.00 36.75 6.13
7222 10041 7.466860 GCACCTAATAATAATGTATAAGGGCGC 60.467 40.741 0.00 0.00 0.00 6.53
7223 10042 7.769044 CACCTAATAATAATGTATAAGGGCGCT 59.231 37.037 7.64 0.00 0.00 5.92
7224 10043 8.326529 ACCTAATAATAATGTATAAGGGCGCTT 58.673 33.333 20.68 20.68 0.00 4.68
7225 10044 8.827677 CCTAATAATAATGTATAAGGGCGCTTC 58.172 37.037 20.47 6.52 0.00 3.86
7226 10045 9.601217 CTAATAATAATGTATAAGGGCGCTTCT 57.399 33.333 20.47 12.94 0.00 2.85
7227 10046 7.849804 ATAATAATGTATAAGGGCGCTTCTG 57.150 36.000 20.47 0.00 0.00 3.02
7228 10047 1.884235 ATGTATAAGGGCGCTTCTGC 58.116 50.000 20.47 14.15 0.00 4.26
7259 16322 0.722848 CACGTTTTTATACGCCCGCT 59.277 50.000 0.00 0.00 45.06 5.52
7264 16327 4.209080 ACGTTTTTATACGCCCGCTTATAC 59.791 41.667 0.00 0.00 45.06 1.47
7267 16330 4.757799 TTTATACGCCCGCTTATACGTA 57.242 40.909 0.00 0.00 44.16 3.57
7268 16331 2.619013 ATACGCCCGCTTATACGTAC 57.381 50.000 0.00 0.00 43.01 3.67
7269 16332 0.234625 TACGCCCGCTTATACGTACG 59.765 55.000 15.01 15.01 39.78 3.67
7270 16333 1.009675 CGCCCGCTTATACGTACGT 60.010 57.895 25.98 25.98 0.00 3.57
7273 16336 1.268743 GCCCGCTTATACGTACGTCTT 60.269 52.381 26.53 16.12 0.00 3.01
7275 16338 1.777461 CCGCTTATACGTACGTCTTGC 59.223 52.381 26.53 21.63 0.00 4.01
7276 16339 2.540361 CCGCTTATACGTACGTCTTGCT 60.540 50.000 26.53 8.26 0.00 3.91
7278 16341 3.898946 CGCTTATACGTACGTCTTGCTAG 59.101 47.826 26.53 14.81 0.00 3.42
7279 16342 3.663105 GCTTATACGTACGTCTTGCTAGC 59.337 47.826 26.53 20.01 0.00 3.42
7280 16343 4.554330 GCTTATACGTACGTCTTGCTAGCT 60.554 45.833 26.53 0.00 0.00 3.32
7281 16344 5.333645 GCTTATACGTACGTCTTGCTAGCTA 60.334 44.000 26.53 7.59 0.00 3.32
7282 16345 6.620303 GCTTATACGTACGTCTTGCTAGCTAT 60.620 42.308 26.53 11.03 0.00 2.97
7284 16347 2.941064 ACGTACGTCTTGCTAGCTATGA 59.059 45.455 16.72 8.42 0.00 2.15
7285 16348 3.242673 ACGTACGTCTTGCTAGCTATGAC 60.243 47.826 16.72 18.04 0.00 3.06
7287 16350 1.759994 CGTCTTGCTAGCTATGACGG 58.240 55.000 30.67 20.30 44.29 4.79
7288 16351 1.492720 GTCTTGCTAGCTATGACGGC 58.507 55.000 17.23 0.00 0.00 5.68
7289 16352 0.030773 TCTTGCTAGCTATGACGGCG 59.969 55.000 17.23 4.80 34.52 6.46
7290 16353 0.030773 CTTGCTAGCTATGACGGCGA 59.969 55.000 16.62 0.00 34.52 5.54
7291 16354 0.458260 TTGCTAGCTATGACGGCGAA 59.542 50.000 16.62 0.57 34.52 4.70
7292 16355 0.030773 TGCTAGCTATGACGGCGAAG 59.969 55.000 16.62 6.42 34.52 3.79
7293 16356 0.664767 GCTAGCTATGACGGCGAAGG 60.665 60.000 16.62 0.00 34.52 3.46
7310 16373 4.436852 GCGAAGGCGTGATGAGAATAAAAA 60.437 41.667 0.00 0.00 40.36 1.94
7311 16374 5.258622 CGAAGGCGTGATGAGAATAAAAAG 58.741 41.667 0.00 0.00 0.00 2.27
7328 16391 3.124921 GCCAATAGCGTGCGGTGT 61.125 61.111 6.55 0.00 0.00 4.16
7337 16400 3.356267 GTGCGGTGTCTGCATGCA 61.356 61.111 21.29 21.29 45.34 3.96
7343 16406 2.046120 TGTCTGCATGCATGGCGA 60.046 55.556 27.34 12.29 0.00 5.54
7344 16407 1.452470 TGTCTGCATGCATGGCGAT 60.452 52.632 27.34 0.00 0.00 4.58
7356 16419 2.341911 GGCGATGCCTCTCCTAGC 59.658 66.667 0.00 0.00 46.69 3.42
7357 16420 2.206536 GGCGATGCCTCTCCTAGCT 61.207 63.158 0.00 0.00 46.69 3.32
7358 16421 1.006337 GCGATGCCTCTCCTAGCTG 60.006 63.158 0.00 0.00 0.00 4.24
7359 16422 1.459455 GCGATGCCTCTCCTAGCTGA 61.459 60.000 0.00 0.00 0.00 4.26
7360 16423 1.035923 CGATGCCTCTCCTAGCTGAA 58.964 55.000 0.00 0.00 0.00 3.02
7361 16424 1.000385 CGATGCCTCTCCTAGCTGAAG 60.000 57.143 0.00 0.00 0.00 3.02
7364 16427 1.286257 TGCCTCTCCTAGCTGAAGAGA 59.714 52.381 18.28 14.56 35.43 3.10
7367 16430 2.653726 CTCTCCTAGCTGAAGAGAGCA 58.346 52.381 20.04 0.08 45.10 4.26
7368 16431 2.620115 CTCTCCTAGCTGAAGAGAGCAG 59.380 54.545 20.04 5.25 45.10 4.24
7369 16432 2.025416 TCTCCTAGCTGAAGAGAGCAGT 60.025 50.000 0.00 0.00 41.83 4.40
7417 19607 1.661341 CAGGTTGGTCTGCTCATAGC 58.339 55.000 0.00 0.00 42.82 2.97
7419 19609 1.209019 AGGTTGGTCTGCTCATAGCTG 59.791 52.381 0.00 0.00 42.97 4.24
7421 19611 2.616510 GGTTGGTCTGCTCATAGCTGTT 60.617 50.000 0.00 0.00 42.97 3.16
7478 19676 8.169910 GCATGTTTATGTTTACGTGTATGTGTA 58.830 33.333 0.00 0.00 36.65 2.90
7484 19682 4.989168 TGTTTACGTGTATGTGTACATGCA 59.011 37.500 11.01 11.01 46.94 3.96
7491 19689 3.622612 TGTATGTGTACATGCATGTCAGC 59.377 43.478 34.54 24.24 42.56 4.26
7511 19709 2.926159 GCATGTGTAATGTGTTGCACCC 60.926 50.000 6.87 0.00 46.44 4.61
7513 19711 2.591923 TGTGTAATGTGTTGCACCCAT 58.408 42.857 6.87 0.00 46.44 4.00
7523 19721 5.295950 TGTGTTGCACCCATAAATGAAAAG 58.704 37.500 0.00 0.00 32.73 2.27
7538 19736 5.968387 ATGAAAAGCTACGTATCTTTCCG 57.032 39.130 21.09 0.00 31.91 4.30
7540 19738 2.220479 AAGCTACGTATCTTTCCGGC 57.780 50.000 5.86 0.00 0.00 6.13
7544 19742 2.913613 CTACGTATCTTTCCGGCTACG 58.086 52.381 0.00 7.63 41.89 3.51
7558 19756 1.073177 GCTACGCCGCTTTGTCTAAA 58.927 50.000 0.00 0.00 0.00 1.85
7559 19757 1.664151 GCTACGCCGCTTTGTCTAAAT 59.336 47.619 0.00 0.00 0.00 1.40
7560 19758 2.861935 GCTACGCCGCTTTGTCTAAATA 59.138 45.455 0.00 0.00 0.00 1.40
7634 19858 1.126079 ACGAAAGTAGCAACACGTCG 58.874 50.000 0.00 0.00 46.88 5.12
7637 19861 2.216940 CGAAAGTAGCAACACGTCGAAA 59.783 45.455 0.00 0.00 34.65 3.46
7639 19863 4.607557 CGAAAGTAGCAACACGTCGAAAAT 60.608 41.667 0.00 0.00 34.65 1.82
7659 19883 3.377346 TCAGCTAAGATCGCATCTTCC 57.623 47.619 12.69 7.55 46.17 3.46
7662 19886 2.298729 AGCTAAGATCGCATCTTCCCTC 59.701 50.000 12.69 4.30 46.17 4.30
7663 19887 2.298729 GCTAAGATCGCATCTTCCCTCT 59.701 50.000 12.69 0.00 46.17 3.69
7665 19889 4.021894 GCTAAGATCGCATCTTCCCTCTTA 60.022 45.833 12.69 0.00 46.17 2.10
7667 19891 5.559148 AAGATCGCATCTTCCCTCTTATT 57.441 39.130 5.80 0.00 46.17 1.40
7668 19892 6.672266 AAGATCGCATCTTCCCTCTTATTA 57.328 37.500 5.80 0.00 46.17 0.98
7669 19893 6.279513 AGATCGCATCTTCCCTCTTATTAG 57.720 41.667 0.00 0.00 35.76 1.73
7670 19894 5.777732 AGATCGCATCTTCCCTCTTATTAGT 59.222 40.000 0.00 0.00 35.76 2.24
7671 19895 6.948886 AGATCGCATCTTCCCTCTTATTAGTA 59.051 38.462 0.00 0.00 35.76 1.82
7672 19896 6.328641 TCGCATCTTCCCTCTTATTAGTAC 57.671 41.667 0.00 0.00 0.00 2.73
7673 19897 5.831525 TCGCATCTTCCCTCTTATTAGTACA 59.168 40.000 0.00 0.00 0.00 2.90
7674 19898 6.322969 TCGCATCTTCCCTCTTATTAGTACAA 59.677 38.462 0.00 0.00 0.00 2.41
7675 19899 6.421202 CGCATCTTCCCTCTTATTAGTACAAC 59.579 42.308 0.00 0.00 0.00 3.32
7676 19900 7.501844 GCATCTTCCCTCTTATTAGTACAACT 58.498 38.462 0.00 0.00 0.00 3.16
7677 19901 7.988028 GCATCTTCCCTCTTATTAGTACAACTT 59.012 37.037 0.00 0.00 0.00 2.66
7680 19904 8.680903 TCTTCCCTCTTATTAGTACAACTTACG 58.319 37.037 0.00 0.00 0.00 3.18
7681 19905 6.799512 TCCCTCTTATTAGTACAACTTACGC 58.200 40.000 0.00 0.00 0.00 4.42
7682 19906 5.981915 CCCTCTTATTAGTACAACTTACGCC 59.018 44.000 0.00 0.00 0.00 5.68
7683 19907 6.406177 CCCTCTTATTAGTACAACTTACGCCA 60.406 42.308 0.00 0.00 0.00 5.69
7684 19908 6.696148 CCTCTTATTAGTACAACTTACGCCAG 59.304 42.308 0.00 0.00 0.00 4.85
7691 19915 1.272769 ACAACTTACGCCAGAGACTCC 59.727 52.381 0.00 0.00 0.00 3.85
7701 19925 2.300437 GCCAGAGACTCCACTGTACTTT 59.700 50.000 0.00 0.00 32.93 2.66
7702 19926 3.244249 GCCAGAGACTCCACTGTACTTTT 60.244 47.826 0.00 0.00 32.93 2.27
7703 19927 4.021368 GCCAGAGACTCCACTGTACTTTTA 60.021 45.833 0.00 0.00 32.93 1.52
7704 19928 5.715070 CCAGAGACTCCACTGTACTTTTAG 58.285 45.833 0.00 0.00 32.93 1.85
7705 19929 5.244178 CCAGAGACTCCACTGTACTTTTAGT 59.756 44.000 0.00 0.00 32.93 2.24
7707 19931 6.642950 CAGAGACTCCACTGTACTTTTAGTTG 59.357 42.308 0.00 0.00 0.00 3.16
7708 19932 6.324254 AGAGACTCCACTGTACTTTTAGTTGT 59.676 38.462 0.00 0.00 0.00 3.32
7710 19934 7.432059 AGACTCCACTGTACTTTTAGTTGTAC 58.568 38.462 0.00 0.00 39.37 2.90
7711 19935 7.069085 AGACTCCACTGTACTTTTAGTTGTACA 59.931 37.037 0.00 0.00 44.32 2.90
7712 19936 7.558604 ACTCCACTGTACTTTTAGTTGTACAA 58.441 34.615 3.59 3.59 45.31 2.41
7713 19937 8.208903 ACTCCACTGTACTTTTAGTTGTACAAT 58.791 33.333 12.26 3.86 45.31 2.71
7714 19938 9.701098 CTCCACTGTACTTTTAGTTGTACAATA 57.299 33.333 12.26 2.90 45.31 1.90
7782 20006 7.250569 ACTAACGTTTTCTTAATCATGCATGG 58.749 34.615 25.97 10.04 0.00 3.66
7788 20012 6.795144 TTTCTTAATCATGCATGGGTCAAT 57.205 33.333 25.97 9.34 0.00 2.57
7789 20013 5.777850 TCTTAATCATGCATGGGTCAATG 57.222 39.130 25.97 10.84 0.00 2.82
7809 20033 4.991153 TGCTGGACTTCTAGACTATGTG 57.009 45.455 0.00 0.00 0.00 3.21
7830 20054 3.245229 TGGGGCACAACATTATGAGAACT 60.245 43.478 0.00 0.00 0.00 3.01
7831 20055 3.129287 GGGGCACAACATTATGAGAACTG 59.871 47.826 0.00 0.00 0.00 3.16
7839 20063 6.936335 ACAACATTATGAGAACTGACATGTGA 59.064 34.615 1.15 0.00 0.00 3.58
7847 20071 7.174107 TGAGAACTGACATGTGATTAGATGA 57.826 36.000 1.15 0.00 32.28 2.92
7848 20072 7.614494 TGAGAACTGACATGTGATTAGATGAA 58.386 34.615 1.15 0.00 32.28 2.57
7852 20076 9.755804 GAACTGACATGTGATTAGATGAATAGA 57.244 33.333 1.15 0.00 32.28 1.98
7873 20097 0.175073 GAGTAGTTGTACCCAGCCCG 59.825 60.000 0.00 0.00 0.00 6.13
7877 20101 1.198759 AGTTGTACCCAGCCCGTCAT 61.199 55.000 0.00 0.00 0.00 3.06
7878 20102 1.024579 GTTGTACCCAGCCCGTCATG 61.025 60.000 0.00 0.00 0.00 3.07
7897 20121 1.146774 TGGATCAAAAGCCCAGGTTGA 59.853 47.619 0.00 0.00 35.83 3.18
7900 20124 2.151502 TCAAAAGCCCAGGTTGACAA 57.848 45.000 0.00 0.00 0.00 3.18
7953 20177 0.817634 TGCCGAGAGTTTGGGTGTTG 60.818 55.000 0.00 0.00 0.00 3.33
7954 20178 1.949257 CCGAGAGTTTGGGTGTTGC 59.051 57.895 0.00 0.00 0.00 4.17
7955 20179 0.535102 CCGAGAGTTTGGGTGTTGCT 60.535 55.000 0.00 0.00 0.00 3.91
7956 20180 1.270625 CCGAGAGTTTGGGTGTTGCTA 60.271 52.381 0.00 0.00 0.00 3.49
8005 20230 1.002134 GCCCTTTGCAGAGTGCCTA 60.002 57.895 0.00 0.00 44.23 3.93
8016 20241 2.762887 CAGAGTGCCTAGAGGAACATCA 59.237 50.000 9.47 0.00 46.68 3.07
8030 20255 3.738282 GGAACATCATCGAGAAGGAATCG 59.262 47.826 0.00 0.00 41.50 3.34
8033 20258 2.498807 TCATCGAGAAGGAATCGCTG 57.501 50.000 0.00 0.00 39.98 5.18
8037 20262 2.607187 TCGAGAAGGAATCGCTGTTTC 58.393 47.619 0.00 0.00 39.98 2.78
8080 20308 5.382618 AGGCAAAGCAATCACTTCTTTAG 57.617 39.130 0.00 0.00 0.00 1.85
8117 20347 7.923414 AAAAATCTACACTCAAGATACACCC 57.077 36.000 0.00 0.00 33.32 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.737804 AAGCACACACAATTGCGTGA 59.262 45.000 28.44 0.00 43.87 4.35
54 58 8.897872 TTCCGAGAAAAACAAGACTAACTATT 57.102 30.769 0.00 0.00 0.00 1.73
365 1616 2.420129 GGCTGTGTGGAGTCCGATAATT 60.420 50.000 4.30 0.00 0.00 1.40
367 1618 0.535335 GGCTGTGTGGAGTCCGATAA 59.465 55.000 4.30 0.00 0.00 1.75
372 1623 3.302347 CTCGGGCTGTGTGGAGTCC 62.302 68.421 0.73 0.73 34.02 3.85
382 1633 0.453390 GATTTTTGGCTCTCGGGCTG 59.547 55.000 0.00 0.00 41.48 4.85
389 1640 5.707066 ACAGATAGAGGATTTTTGGCTCT 57.293 39.130 0.00 0.00 0.00 4.09
480 1741 1.539929 CCGGCAAGAGATCTCCATCAC 60.540 57.143 19.30 5.64 0.00 3.06
510 1771 4.711846 TGGCTGATGTTGTAGTACTGAGAT 59.288 41.667 5.39 0.00 0.00 2.75
513 1774 3.832490 AGTGGCTGATGTTGTAGTACTGA 59.168 43.478 5.39 0.00 0.00 3.41
517 1778 3.368427 GCTGAGTGGCTGATGTTGTAGTA 60.368 47.826 0.00 0.00 0.00 1.82
518 1779 2.613977 GCTGAGTGGCTGATGTTGTAGT 60.614 50.000 0.00 0.00 0.00 2.73
519 1780 2.005451 GCTGAGTGGCTGATGTTGTAG 58.995 52.381 0.00 0.00 0.00 2.74
615 1972 1.218316 CCCTAGCAGACGTGTTCCC 59.782 63.158 0.00 0.00 0.00 3.97
617 1974 1.292223 TGCCCTAGCAGACGTGTTC 59.708 57.895 0.00 0.00 46.52 3.18
629 2006 3.755628 GGTCTGTCGCGTGCCCTA 61.756 66.667 5.77 0.00 0.00 3.53
636 2013 2.426183 CTTTCGTCGGTCTGTCGCG 61.426 63.158 0.00 0.00 0.00 5.87
638 2015 1.443872 CCCTTTCGTCGGTCTGTCG 60.444 63.158 0.00 0.00 0.00 4.35
661 2038 1.671328 GGAGGCTAATTTTGGACGAGC 59.329 52.381 0.00 0.00 0.00 5.03
672 2959 1.072159 GGATGCGCTGGAGGCTAAT 59.928 57.895 9.73 0.00 39.13 1.73
679 2966 4.221422 GCCTACGGATGCGCTGGA 62.221 66.667 19.51 0.00 0.00 3.86
696 2983 5.006746 GTGTACGGAGATTTTGGCTCTAATG 59.993 44.000 0.00 0.00 32.98 1.90
702 2989 1.674817 CGGTGTACGGAGATTTTGGCT 60.675 52.381 0.00 0.00 39.42 4.75
703 2990 0.725117 CGGTGTACGGAGATTTTGGC 59.275 55.000 0.00 0.00 39.42 4.52
714 3001 0.450983 GTTCCTCTCTCCGGTGTACG 59.549 60.000 0.00 0.00 43.80 3.67
715 3002 1.473278 CAGTTCCTCTCTCCGGTGTAC 59.527 57.143 0.00 0.00 0.00 2.90
716 3003 1.353358 TCAGTTCCTCTCTCCGGTGTA 59.647 52.381 0.00 0.00 0.00 2.90
717 3004 0.112606 TCAGTTCCTCTCTCCGGTGT 59.887 55.000 0.00 0.00 0.00 4.16
718 3005 0.814457 CTCAGTTCCTCTCTCCGGTG 59.186 60.000 0.00 0.00 0.00 4.94
719 3006 0.968393 GCTCAGTTCCTCTCTCCGGT 60.968 60.000 0.00 0.00 0.00 5.28
720 3007 1.813192 GCTCAGTTCCTCTCTCCGG 59.187 63.158 0.00 0.00 0.00 5.14
721 3008 1.027255 TCGCTCAGTTCCTCTCTCCG 61.027 60.000 0.00 0.00 0.00 4.63
722 3009 0.738389 CTCGCTCAGTTCCTCTCTCC 59.262 60.000 0.00 0.00 0.00 3.71
723 3010 1.459450 ACTCGCTCAGTTCCTCTCTC 58.541 55.000 0.00 0.00 26.56 3.20
724 3011 2.026636 AGTACTCGCTCAGTTCCTCTCT 60.027 50.000 0.00 0.00 36.43 3.10
725 3012 2.361789 AGTACTCGCTCAGTTCCTCTC 58.638 52.381 0.00 0.00 36.43 3.20
726 3013 2.500392 AGTACTCGCTCAGTTCCTCT 57.500 50.000 0.00 0.00 36.43 3.69
727 3014 5.178067 GTCTATAGTACTCGCTCAGTTCCTC 59.822 48.000 0.00 0.00 36.43 3.71
728 3015 5.058490 GTCTATAGTACTCGCTCAGTTCCT 58.942 45.833 0.00 0.00 36.43 3.36
729 3016 5.058490 AGTCTATAGTACTCGCTCAGTTCC 58.942 45.833 0.00 0.00 36.43 3.62
730 3017 7.894376 ATAGTCTATAGTACTCGCTCAGTTC 57.106 40.000 0.00 0.00 36.43 3.01
731 3018 8.991243 CTATAGTCTATAGTACTCGCTCAGTT 57.009 38.462 16.08 0.00 34.73 3.16
744 3031 6.091577 CACACGAGGAGCACTATAGTCTATAG 59.908 46.154 20.87 20.87 42.97 1.31
745 3032 5.932883 CACACGAGGAGCACTATAGTCTATA 59.067 44.000 1.26 0.00 0.00 1.31
746 3033 4.757657 CACACGAGGAGCACTATAGTCTAT 59.242 45.833 1.26 0.00 0.00 1.98
747 3034 4.127907 CACACGAGGAGCACTATAGTCTA 58.872 47.826 1.26 0.00 0.00 2.59
748 3035 2.946329 CACACGAGGAGCACTATAGTCT 59.054 50.000 1.26 3.57 0.00 3.24
749 3036 2.541999 GCACACGAGGAGCACTATAGTC 60.542 54.545 1.26 0.00 0.00 2.59
750 3037 1.405821 GCACACGAGGAGCACTATAGT 59.594 52.381 0.00 0.00 0.00 2.12
751 3038 1.269309 GGCACACGAGGAGCACTATAG 60.269 57.143 0.00 0.00 0.00 1.31
788 3075 1.929860 ATGTGGAGTGGAGGCCATGG 61.930 60.000 7.63 7.63 35.28 3.66
791 3078 2.605607 CCATGTGGAGTGGAGGCCA 61.606 63.158 5.01 0.00 39.12 5.36
792 3079 2.142292 AACCATGTGGAGTGGAGGCC 62.142 60.000 5.96 0.00 39.12 5.19
794 3081 0.692476 TGAACCATGTGGAGTGGAGG 59.308 55.000 5.96 0.00 39.12 4.30
796 3083 1.004628 CCATGAACCATGTGGAGTGGA 59.995 52.381 5.96 0.00 39.94 4.02
797 3084 1.466856 CCATGAACCATGTGGAGTGG 58.533 55.000 5.96 4.54 39.94 4.00
798 3085 0.813184 GCCATGAACCATGTGGAGTG 59.187 55.000 5.96 0.00 39.94 3.51
799 3086 0.405198 TGCCATGAACCATGTGGAGT 59.595 50.000 5.96 0.00 39.94 3.85
814 3101 0.756442 GCCCCTGCTTATTGATGCCA 60.756 55.000 0.00 0.00 33.53 4.92
815 3102 1.799258 CGCCCCTGCTTATTGATGCC 61.799 60.000 0.00 0.00 34.43 4.40
816 3103 1.103398 ACGCCCCTGCTTATTGATGC 61.103 55.000 0.00 0.00 34.43 3.91
820 3107 0.663153 GCTTACGCCCCTGCTTATTG 59.337 55.000 0.00 0.00 34.43 1.90
821 3108 3.095922 GCTTACGCCCCTGCTTATT 57.904 52.632 0.00 0.00 34.43 1.40
822 3109 4.878878 GCTTACGCCCCTGCTTAT 57.121 55.556 0.00 0.00 34.43 1.73
833 3120 1.683790 CTTCGCGAGGTTGGCTTACG 61.684 60.000 9.59 0.00 0.00 3.18
834 3121 0.389426 TCTTCGCGAGGTTGGCTTAC 60.389 55.000 18.33 0.00 0.00 2.34
836 3123 1.021390 CATCTTCGCGAGGTTGGCTT 61.021 55.000 18.33 0.00 0.00 4.35
838 3125 3.093278 CATCTTCGCGAGGTTGGC 58.907 61.111 18.33 0.00 0.00 4.52
839 3126 2.464459 GGCATCTTCGCGAGGTTGG 61.464 63.158 24.87 14.33 0.00 3.77
840 3127 2.464459 GGGCATCTTCGCGAGGTTG 61.464 63.158 21.10 21.10 0.00 3.77
841 3128 2.125106 GGGCATCTTCGCGAGGTT 60.125 61.111 18.33 7.08 0.00 3.50
858 3165 4.271816 CACGATCGGGGAGAGGCG 62.272 72.222 20.98 0.00 36.87 5.52
860 3167 1.736586 CTTCACGATCGGGGAGAGG 59.263 63.158 21.73 8.21 0.00 3.69
865 3172 4.547367 GGCCCTTCACGATCGGGG 62.547 72.222 18.99 19.29 41.64 5.73
877 3184 2.741878 TAATCTATCCGGCCGGCCCT 62.742 60.000 39.89 26.64 34.68 5.19
898 3205 5.589050 ACGAGCCAGATATATAACTATCGCA 59.411 40.000 15.35 0.00 34.05 5.10
900 3207 6.907748 CACACGAGCCAGATATATAACTATCG 59.092 42.308 14.49 14.49 34.05 2.92
902 3209 7.704578 ACACACGAGCCAGATATATAACTAT 57.295 36.000 0.00 0.00 0.00 2.12
909 3216 8.683615 CCTTTATATACACACGAGCCAGATATA 58.316 37.037 0.00 0.00 0.00 0.86
910 3217 7.548097 CCTTTATATACACACGAGCCAGATAT 58.452 38.462 0.00 0.00 0.00 1.63
916 3257 3.064931 GGCCTTTATATACACACGAGCC 58.935 50.000 0.00 0.00 0.00 4.70
973 3314 2.424956 CTCACACGAGAGATGGATGACA 59.575 50.000 0.00 0.00 42.34 3.58
974 3315 2.797792 GCTCACACGAGAGATGGATGAC 60.798 54.545 8.13 0.00 42.34 3.06
975 3316 1.406898 GCTCACACGAGAGATGGATGA 59.593 52.381 8.13 0.00 42.34 2.92
976 3317 1.135721 TGCTCACACGAGAGATGGATG 59.864 52.381 8.13 0.00 42.34 3.51
977 3318 1.408340 CTGCTCACACGAGAGATGGAT 59.592 52.381 8.13 0.00 42.34 3.41
980 3321 0.108945 TGCTGCTCACACGAGAGATG 60.109 55.000 0.00 2.21 42.34 2.90
987 3329 1.518056 AACCCATTGCTGCTCACACG 61.518 55.000 0.00 0.00 0.00 4.49
1005 3347 0.466555 CCCCACCCTTGTGAACGAAA 60.467 55.000 0.00 0.00 45.76 3.46
1009 3351 0.750249 CAAACCCCACCCTTGTGAAC 59.250 55.000 0.00 0.00 45.76 3.18
1139 3490 3.499737 CCTGACCATCAACGCGCC 61.500 66.667 5.73 0.00 0.00 6.53
1146 3497 1.003839 GTCGTTGCCCTGACCATCA 60.004 57.895 0.00 0.00 0.00 3.07
1151 3502 2.022129 CACGAGTCGTTGCCCTGAC 61.022 63.158 17.16 0.00 38.32 3.51
1157 3508 2.267227 GATGTCGCACGAGTCGTTGC 62.267 60.000 17.16 20.37 38.32 4.17
1158 3509 1.001745 TGATGTCGCACGAGTCGTTG 61.002 55.000 17.16 11.88 38.32 4.10
1174 3528 0.106268 TGGTGGTGTTGGCACTTGAT 60.106 50.000 0.00 0.00 44.65 2.57
1236 3590 2.443394 GGGGTGATGATGCTCCCGA 61.443 63.158 0.00 0.00 41.46 5.14
1248 3602 3.695606 GACGCTCTGCTGGGGTGA 61.696 66.667 6.53 0.00 0.00 4.02
1286 3640 2.599281 TCGTCGGGTCTTGCCAGA 60.599 61.111 0.00 0.00 39.15 3.86
1363 3717 3.036084 CTCGTTGACGCCGTTGCT 61.036 61.111 0.00 0.00 39.60 3.91
1387 3741 3.465403 CTCCTCCTCCTGGGCGTG 61.465 72.222 0.00 0.00 34.39 5.34
1393 3747 4.787280 ACCGGGCTCCTCCTCCTG 62.787 72.222 6.32 0.00 34.39 3.86
1394 3748 4.467107 GACCGGGCTCCTCCTCCT 62.467 72.222 6.32 0.00 34.39 3.69
1416 3770 2.572095 TAACACTCTGGGCATCGGCG 62.572 60.000 0.00 0.00 42.47 6.46
1417 3771 0.811616 CTAACACTCTGGGCATCGGC 60.812 60.000 0.00 0.00 40.13 5.54
1418 3772 0.824109 TCTAACACTCTGGGCATCGG 59.176 55.000 0.00 0.00 0.00 4.18
1419 3773 1.478510 AGTCTAACACTCTGGGCATCG 59.521 52.381 0.00 0.00 0.00 3.84
1420 3774 4.100189 ACATAGTCTAACACTCTGGGCATC 59.900 45.833 0.00 0.00 34.22 3.91
1421 3775 4.033709 ACATAGTCTAACACTCTGGGCAT 58.966 43.478 0.00 0.00 34.22 4.40
1422 3776 3.441101 ACATAGTCTAACACTCTGGGCA 58.559 45.455 0.00 0.00 34.22 5.36
1429 3783 8.754991 ACAGAAGCTATACATAGTCTAACACT 57.245 34.615 0.00 0.00 39.41 3.55
1764 4118 2.185867 GGCGGCGTGGAATAGACA 59.814 61.111 9.37 0.00 0.00 3.41
1852 4206 4.803426 CAGGAGCGGCAGGACGAC 62.803 72.222 1.45 0.00 35.47 4.34
1864 4218 4.845580 ATCCGCTTGCGGCAGGAG 62.846 66.667 26.94 12.70 43.00 3.69
1865 4219 4.838152 GATCCGCTTGCGGCAGGA 62.838 66.667 26.94 13.86 43.53 3.86
1867 4221 3.869272 GTGATCCGCTTGCGGCAG 61.869 66.667 26.94 6.31 41.91 4.85
1868 4222 4.695993 TGTGATCCGCTTGCGGCA 62.696 61.111 26.94 17.86 41.91 5.69
1869 4223 4.166011 GTGTGATCCGCTTGCGGC 62.166 66.667 26.94 15.57 37.64 6.53
1870 4224 3.499737 GGTGTGATCCGCTTGCGG 61.500 66.667 26.01 26.01 0.00 5.69
1871 4225 3.853330 CGGTGTGATCCGCTTGCG 61.853 66.667 8.14 8.14 43.96 4.85
2672 5248 0.952984 GAACTCAGTGGCAGTGGAGC 60.953 60.000 21.53 6.13 0.00 4.70
3015 5593 1.436336 CGGTAAGGTCGCAGTAGGG 59.564 63.158 0.00 0.00 0.00 3.53
3049 5628 1.066257 CACAAAGCTGGCACACACC 59.934 57.895 0.00 0.00 0.00 4.16
3117 5696 2.827921 GTCATTGCCAAGACCAAGGAAT 59.172 45.455 0.00 0.00 35.17 3.01
3981 6792 2.783135 ACGGTTGATGAGAAAGCATGT 58.217 42.857 0.00 0.00 0.00 3.21
4161 6973 7.017056 ACCTTTATGAAGAGAGCTATAGCCAAT 59.983 37.037 21.17 7.37 37.06 3.16
4285 7097 1.608025 GCAGAGATGGTGGTTCGACAA 60.608 52.381 0.00 0.00 0.00 3.18
5004 7816 1.903860 AGCAACCGTACCATCCTTACA 59.096 47.619 0.00 0.00 0.00 2.41
5184 7996 7.763985 CCATTTTGAGTCAATAACATTTACCCC 59.236 37.037 6.36 0.00 0.00 4.95
5494 8306 3.791973 ATAGTGCTTTGGAGAGACGAG 57.208 47.619 0.00 0.00 0.00 4.18
5826 8638 1.607148 GCCCGCTCTTTGTAACAACTT 59.393 47.619 0.00 0.00 0.00 2.66
6323 9135 3.209410 CAACTCCTGAAGCAAAGACTGT 58.791 45.455 0.00 0.00 0.00 3.55
6406 9218 4.202284 GGGCATGAAATACTGGATTTGCAT 60.202 41.667 1.80 3.94 37.90 3.96
6447 9259 5.670792 TCCCGTACAAAGTGATAGTCAAT 57.329 39.130 0.00 0.00 0.00 2.57
6480 9292 5.489792 AACTTGATCTGGAGTTGCTTCTA 57.510 39.130 8.31 0.00 34.96 2.10
6544 9356 4.074970 CTCAAACTGTGGCAGAGGTAAAT 58.925 43.478 16.69 0.00 35.18 1.40
6749 9562 1.157257 TTGTCGCACATGTCGTTGCT 61.157 50.000 14.43 0.00 0.00 3.91
6750 9563 0.722469 CTTGTCGCACATGTCGTTGC 60.722 55.000 14.43 6.74 0.00 4.17
6751 9564 0.858583 TCTTGTCGCACATGTCGTTG 59.141 50.000 14.43 0.00 0.00 4.10
6753 9566 1.139989 CTTCTTGTCGCACATGTCGT 58.860 50.000 14.43 0.00 0.00 4.34
6754 9567 1.136529 CACTTCTTGTCGCACATGTCG 60.137 52.381 0.00 3.20 0.00 4.35
6755 9568 1.398960 GCACTTCTTGTCGCACATGTC 60.399 52.381 0.00 0.00 0.00 3.06
6756 9569 0.588252 GCACTTCTTGTCGCACATGT 59.412 50.000 0.00 0.00 0.00 3.21
6757 9570 0.110056 GGCACTTCTTGTCGCACATG 60.110 55.000 0.00 0.00 0.00 3.21
6758 9571 0.534877 TGGCACTTCTTGTCGCACAT 60.535 50.000 0.00 0.00 29.36 3.21
6759 9572 0.746204 TTGGCACTTCTTGTCGCACA 60.746 50.000 0.00 0.00 29.36 4.57
6760 9573 0.317020 GTTGGCACTTCTTGTCGCAC 60.317 55.000 0.00 0.00 29.36 5.34
6761 9574 0.746204 TGTTGGCACTTCTTGTCGCA 60.746 50.000 0.00 0.00 29.36 5.10
6762 9575 0.317020 GTGTTGGCACTTCTTGTCGC 60.317 55.000 0.00 0.00 42.13 5.19
6763 9576 0.307760 GGTGTTGGCACTTCTTGTCG 59.692 55.000 0.00 0.00 44.65 4.35
6764 9577 1.065551 GTGGTGTTGGCACTTCTTGTC 59.934 52.381 0.00 0.00 44.65 3.18
6765 9578 1.102978 GTGGTGTTGGCACTTCTTGT 58.897 50.000 0.00 0.00 44.65 3.16
6766 9579 0.385390 GGTGGTGTTGGCACTTCTTG 59.615 55.000 0.00 0.00 44.65 3.02
6767 9580 0.033601 TGGTGGTGTTGGCACTTCTT 60.034 50.000 0.00 0.00 44.65 2.52
6768 9581 0.033601 TTGGTGGTGTTGGCACTTCT 60.034 50.000 0.00 0.00 44.65 2.85
6769 9582 0.385390 CTTGGTGGTGTTGGCACTTC 59.615 55.000 0.00 0.00 44.65 3.01
6770 9583 0.324275 ACTTGGTGGTGTTGGCACTT 60.324 50.000 0.00 0.00 44.65 3.16
6771 9584 0.324275 AACTTGGTGGTGTTGGCACT 60.324 50.000 0.00 0.00 44.65 4.40
6772 9585 0.102300 GAACTTGGTGGTGTTGGCAC 59.898 55.000 0.00 0.00 44.53 5.01
6773 9586 1.040339 GGAACTTGGTGGTGTTGGCA 61.040 55.000 0.00 0.00 0.00 4.92
6774 9587 1.739667 GGAACTTGGTGGTGTTGGC 59.260 57.895 0.00 0.00 0.00 4.52
6775 9588 1.452145 CCGGAACTTGGTGGTGTTGG 61.452 60.000 0.00 0.00 0.00 3.77
6776 9589 2.029743 CCGGAACTTGGTGGTGTTG 58.970 57.895 0.00 0.00 0.00 3.33
6777 9590 1.826487 GCCGGAACTTGGTGGTGTT 60.826 57.895 5.05 0.00 0.00 3.32
6778 9591 2.203294 GCCGGAACTTGGTGGTGT 60.203 61.111 5.05 0.00 0.00 4.16
6779 9592 2.983592 GGCCGGAACTTGGTGGTG 60.984 66.667 5.05 0.00 0.00 4.17
6780 9593 3.491598 CTGGCCGGAACTTGGTGGT 62.492 63.158 5.28 0.00 0.00 4.16
6781 9594 2.672996 CTGGCCGGAACTTGGTGG 60.673 66.667 5.28 0.00 0.00 4.61
6782 9595 2.672996 CCTGGCCGGAACTTGGTG 60.673 66.667 15.09 0.00 33.16 4.17
6783 9596 2.457323 TTCCTGGCCGGAACTTGGT 61.457 57.895 20.66 0.00 46.80 3.67
6784 9597 2.434331 TTCCTGGCCGGAACTTGG 59.566 61.111 20.66 4.29 46.80 3.61
6790 9603 1.603455 CTGCTTTTTCCTGGCCGGA 60.603 57.895 15.09 13.06 41.06 5.14
6791 9604 1.903404 ACTGCTTTTTCCTGGCCGG 60.903 57.895 3.88 3.88 0.00 6.13
6792 9605 1.286880 CACTGCTTTTTCCTGGCCG 59.713 57.895 0.00 0.00 0.00 6.13
6793 9606 1.005748 GCACTGCTTTTTCCTGGCC 60.006 57.895 0.00 0.00 0.00 5.36
6794 9607 1.372128 CGCACTGCTTTTTCCTGGC 60.372 57.895 0.00 0.00 0.00 4.85
6795 9608 0.040067 GACGCACTGCTTTTTCCTGG 60.040 55.000 0.00 0.00 0.00 4.45
6796 9609 0.384725 CGACGCACTGCTTTTTCCTG 60.385 55.000 0.00 0.00 0.00 3.86
6797 9610 0.531974 TCGACGCACTGCTTTTTCCT 60.532 50.000 0.00 0.00 0.00 3.36
6798 9611 0.384353 GTCGACGCACTGCTTTTTCC 60.384 55.000 0.00 0.00 0.00 3.13
6799 9612 0.718220 CGTCGACGCACTGCTTTTTC 60.718 55.000 26.59 0.00 0.00 2.29
6800 9613 1.149361 TCGTCGACGCACTGCTTTTT 61.149 50.000 32.19 0.00 39.60 1.94
6801 9614 1.548973 CTCGTCGACGCACTGCTTTT 61.549 55.000 32.19 0.00 39.60 2.27
6802 9615 2.016704 CTCGTCGACGCACTGCTTT 61.017 57.895 32.19 0.00 39.60 3.51
6803 9616 2.429236 CTCGTCGACGCACTGCTT 60.429 61.111 32.19 0.00 39.60 3.91
6804 9617 3.661131 ACTCGTCGACGCACTGCT 61.661 61.111 32.19 7.94 39.60 4.24
6805 9618 3.461982 CACTCGTCGACGCACTGC 61.462 66.667 32.19 0.00 39.60 4.40
6806 9619 3.461982 GCACTCGTCGACGCACTG 61.462 66.667 32.19 24.45 39.60 3.66
6807 9620 4.702081 GGCACTCGTCGACGCACT 62.702 66.667 32.19 14.04 39.60 4.40
6808 9621 4.994201 TGGCACTCGTCGACGCAC 62.994 66.667 32.19 19.57 39.60 5.34
6809 9622 4.994201 GTGGCACTCGTCGACGCA 62.994 66.667 32.19 20.75 39.60 5.24
6810 9623 4.994201 TGTGGCACTCGTCGACGC 62.994 66.667 32.19 18.17 39.60 5.19
6811 9624 2.801162 CTGTGGCACTCGTCGACG 60.801 66.667 31.30 31.30 41.45 5.12
6812 9625 3.106407 GCTGTGGCACTCGTCGAC 61.106 66.667 19.83 5.18 38.54 4.20
6813 9626 4.357947 GGCTGTGGCACTCGTCGA 62.358 66.667 19.83 0.00 40.87 4.20
6818 9631 4.767255 CTCCCGGCTGTGGCACTC 62.767 72.222 19.83 10.35 40.87 3.51
6824 9637 4.457496 ACGATGCTCCCGGCTGTG 62.457 66.667 0.00 0.00 42.39 3.66
6825 9638 4.148825 GACGATGCTCCCGGCTGT 62.149 66.667 0.00 0.00 42.39 4.40
6826 9639 4.899239 GGACGATGCTCCCGGCTG 62.899 72.222 0.00 0.00 42.39 4.85
6832 9645 2.190578 CTTGGGGGACGATGCTCC 59.809 66.667 0.00 0.00 0.00 4.70
6833 9646 2.514824 GCTTGGGGGACGATGCTC 60.515 66.667 0.00 0.00 36.49 4.26
6834 9647 3.329889 TGCTTGGGGGACGATGCT 61.330 61.111 0.00 0.00 39.48 3.79
6835 9648 2.819984 TTCTGCTTGGGGGACGATGC 62.820 60.000 0.00 0.00 39.25 3.91
6836 9649 0.322456 TTTCTGCTTGGGGGACGATG 60.322 55.000 0.00 0.00 0.00 3.84
6837 9650 0.035056 CTTTCTGCTTGGGGGACGAT 60.035 55.000 0.00 0.00 0.00 3.73
6838 9651 1.374947 CTTTCTGCTTGGGGGACGA 59.625 57.895 0.00 0.00 0.00 4.20
6839 9652 0.955919 GACTTTCTGCTTGGGGGACG 60.956 60.000 0.00 0.00 0.00 4.79
6840 9653 0.402121 AGACTTTCTGCTTGGGGGAC 59.598 55.000 0.00 0.00 0.00 4.46
6841 9654 1.149101 AAGACTTTCTGCTTGGGGGA 58.851 50.000 0.00 0.00 0.00 4.81
6842 9655 1.251251 CAAGACTTTCTGCTTGGGGG 58.749 55.000 0.00 0.00 38.22 5.40
6843 9656 0.600057 GCAAGACTTTCTGCTTGGGG 59.400 55.000 0.00 0.00 41.29 4.96
6844 9657 0.239347 CGCAAGACTTTCTGCTTGGG 59.761 55.000 0.00 0.00 44.70 4.12
6845 9658 1.196354 CTCGCAAGACTTTCTGCTTGG 59.804 52.381 0.00 0.00 45.01 3.61
6846 9659 2.138320 TCTCGCAAGACTTTCTGCTTG 58.862 47.619 0.00 0.00 45.01 4.01
6847 9660 2.533266 TCTCGCAAGACTTTCTGCTT 57.467 45.000 0.00 0.00 45.01 3.91
6858 9671 1.071605 GCTACACTTGGTCTCGCAAG 58.928 55.000 0.00 0.00 34.79 4.01
6859 9672 0.320421 GGCTACACTTGGTCTCGCAA 60.320 55.000 0.00 0.00 0.00 4.85
6860 9673 1.292223 GGCTACACTTGGTCTCGCA 59.708 57.895 0.00 0.00 0.00 5.10
6861 9674 1.014564 GTGGCTACACTTGGTCTCGC 61.015 60.000 0.00 0.00 44.29 5.03
6862 9675 3.123674 GTGGCTACACTTGGTCTCG 57.876 57.895 0.00 0.00 44.29 4.04
6872 9685 2.986492 GGTCTACCCAGTGGCTACA 58.014 57.895 2.61 0.00 33.59 2.74
6883 9696 1.382692 CCTTCCTCGTCGGGTCTACC 61.383 65.000 0.00 0.00 0.00 3.18
6884 9697 0.393537 TCCTTCCTCGTCGGGTCTAC 60.394 60.000 0.00 0.00 0.00 2.59
6885 9698 0.107312 CTCCTTCCTCGTCGGGTCTA 60.107 60.000 0.00 0.00 0.00 2.59
6886 9699 1.378778 CTCCTTCCTCGTCGGGTCT 60.379 63.158 0.00 0.00 0.00 3.85
6887 9700 3.066233 GCTCCTTCCTCGTCGGGTC 62.066 68.421 0.00 0.00 0.00 4.46
6888 9701 3.069318 GCTCCTTCCTCGTCGGGT 61.069 66.667 0.00 0.00 0.00 5.28
6889 9702 3.068691 TGCTCCTTCCTCGTCGGG 61.069 66.667 0.00 0.00 0.00 5.14
6890 9703 2.344203 ACTGCTCCTTCCTCGTCGG 61.344 63.158 0.00 0.00 0.00 4.79
6891 9704 1.153939 CACTGCTCCTTCCTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
6892 9705 1.446966 GCACTGCTCCTTCCTCGTC 60.447 63.158 0.00 0.00 0.00 4.20
6893 9706 2.659610 GCACTGCTCCTTCCTCGT 59.340 61.111 0.00 0.00 0.00 4.18
6894 9707 2.507992 CGCACTGCTCCTTCCTCG 60.508 66.667 0.00 0.00 0.00 4.63
6895 9708 1.739562 CACGCACTGCTCCTTCCTC 60.740 63.158 0.00 0.00 0.00 3.71
6896 9709 2.345244 CACGCACTGCTCCTTCCT 59.655 61.111 0.00 0.00 0.00 3.36
6897 9710 3.426568 GCACGCACTGCTCCTTCC 61.427 66.667 0.00 0.00 43.33 3.46
6914 9727 0.233074 CCGTAGCGCATGCAGTATTG 59.767 55.000 19.57 0.51 46.23 1.90
6915 9728 1.498865 GCCGTAGCGCATGCAGTATT 61.499 55.000 19.57 0.02 46.23 1.89
6916 9729 1.956170 GCCGTAGCGCATGCAGTAT 60.956 57.895 19.57 2.22 46.23 2.12
6917 9730 2.584970 GCCGTAGCGCATGCAGTA 60.585 61.111 19.57 5.12 46.23 2.74
6922 9735 2.963854 CTGAGGCCGTAGCGCATG 60.964 66.667 11.47 0.61 41.24 4.06
6923 9736 4.899239 GCTGAGGCCGTAGCGCAT 62.899 66.667 16.72 0.00 41.24 4.73
6933 9746 3.207669 CGGCATTGAGGCTGAGGC 61.208 66.667 0.00 0.00 42.91 4.70
6934 9747 2.515523 CCGGCATTGAGGCTGAGG 60.516 66.667 0.00 0.00 42.91 3.86
6977 9790 4.101448 CTCCTCTTGGGCGTGGGG 62.101 72.222 0.00 0.00 34.39 4.96
6978 9791 4.101448 CCTCCTCTTGGGCGTGGG 62.101 72.222 0.00 0.00 34.39 4.61
7029 9842 3.240134 TTCGTCTGGCAGGACAGGC 62.240 63.158 15.73 0.00 39.65 4.85
7030 9843 1.079543 CTTCGTCTGGCAGGACAGG 60.080 63.158 15.73 1.13 38.98 4.00
7036 9849 3.560068 AGTTTTTACACTTCGTCTGGCAG 59.440 43.478 8.58 8.58 0.00 4.85
7042 9855 6.354039 TCTTTCCAGTTTTTACACTTCGTC 57.646 37.500 0.00 0.00 0.00 4.20
7044 9857 6.071463 CGATCTTTCCAGTTTTTACACTTCG 58.929 40.000 0.00 0.00 0.00 3.79
7052 9865 3.827722 TGGTCCGATCTTTCCAGTTTTT 58.172 40.909 0.00 0.00 0.00 1.94
7054 9867 3.412386 CTTGGTCCGATCTTTCCAGTTT 58.588 45.455 0.00 0.00 0.00 2.66
7055 9868 2.876079 GCTTGGTCCGATCTTTCCAGTT 60.876 50.000 0.00 0.00 0.00 3.16
7056 9869 1.339151 GCTTGGTCCGATCTTTCCAGT 60.339 52.381 0.00 0.00 0.00 4.00
7082 9895 4.064491 GCACTGTCGCACGCACTC 62.064 66.667 0.00 0.00 0.00 3.51
7119 9932 2.504244 GGAGTTGCTCGTCGACGG 60.504 66.667 35.05 25.93 40.29 4.79
7122 9935 4.753877 CGCGGAGTTGCTCGTCGA 62.754 66.667 0.00 0.00 31.30 4.20
7236 16299 2.665537 CGGGCGTATAAAAACGTGTACA 59.334 45.455 0.00 0.00 44.64 2.90
7239 16302 0.443478 GCGGGCGTATAAAAACGTGT 59.557 50.000 0.00 0.00 44.64 4.49
7244 16307 4.367450 ACGTATAAGCGGGCGTATAAAAA 58.633 39.130 7.69 0.00 35.71 1.94
7247 16310 3.424302 CGTACGTATAAGCGGGCGTATAA 60.424 47.826 7.22 0.00 40.98 0.98
7248 16311 2.093625 CGTACGTATAAGCGGGCGTATA 59.906 50.000 7.22 2.80 40.98 1.47
7259 16322 6.424812 TCATAGCTAGCAAGACGTACGTATAA 59.575 38.462 22.87 4.13 0.00 0.98
7264 16327 3.289911 GTCATAGCTAGCAAGACGTACG 58.710 50.000 18.83 15.01 0.00 3.67
7267 16330 2.476873 CGTCATAGCTAGCAAGACGT 57.523 50.000 31.12 11.50 44.87 4.34
7269 16332 1.492720 GCCGTCATAGCTAGCAAGAC 58.507 55.000 18.83 18.69 0.00 3.01
7270 16333 0.030773 CGCCGTCATAGCTAGCAAGA 59.969 55.000 18.83 8.59 0.00 3.02
7273 16336 0.030773 CTTCGCCGTCATAGCTAGCA 59.969 55.000 18.83 3.19 0.00 3.49
7275 16338 0.664767 GCCTTCGCCGTCATAGCTAG 60.665 60.000 0.00 0.00 0.00 3.42
7276 16339 1.362717 GCCTTCGCCGTCATAGCTA 59.637 57.895 0.00 0.00 0.00 3.32
7278 16341 3.330853 CGCCTTCGCCGTCATAGC 61.331 66.667 0.00 0.00 0.00 2.97
7279 16342 2.104331 ACGCCTTCGCCGTCATAG 59.896 61.111 0.00 0.00 39.84 2.23
7280 16343 2.011741 ATCACGCCTTCGCCGTCATA 62.012 55.000 0.00 0.00 39.84 2.15
7281 16344 3.371097 ATCACGCCTTCGCCGTCAT 62.371 57.895 0.00 0.00 39.84 3.06
7282 16345 4.063967 ATCACGCCTTCGCCGTCA 62.064 61.111 0.00 0.00 39.84 4.35
7284 16347 3.989698 CTCATCACGCCTTCGCCGT 62.990 63.158 0.00 0.00 39.84 5.68
7285 16348 3.257561 CTCATCACGCCTTCGCCG 61.258 66.667 0.00 0.00 39.84 6.46
7286 16349 0.811616 ATTCTCATCACGCCTTCGCC 60.812 55.000 0.00 0.00 39.84 5.54
7287 16350 1.852942 TATTCTCATCACGCCTTCGC 58.147 50.000 0.00 0.00 39.84 4.70
7288 16351 4.857871 TTTTATTCTCATCACGCCTTCG 57.142 40.909 0.00 0.00 42.43 3.79
7289 16352 5.030936 GCTTTTTATTCTCATCACGCCTTC 58.969 41.667 0.00 0.00 0.00 3.46
7290 16353 4.142381 GGCTTTTTATTCTCATCACGCCTT 60.142 41.667 0.00 0.00 0.00 4.35
7291 16354 3.378427 GGCTTTTTATTCTCATCACGCCT 59.622 43.478 0.00 0.00 0.00 5.52
7292 16355 3.128589 TGGCTTTTTATTCTCATCACGCC 59.871 43.478 0.00 0.00 0.00 5.68
7293 16356 4.355543 TGGCTTTTTATTCTCATCACGC 57.644 40.909 0.00 0.00 0.00 5.34
7294 16357 6.634436 GCTATTGGCTTTTTATTCTCATCACG 59.366 38.462 0.00 0.00 38.06 4.35
7295 16358 6.634436 CGCTATTGGCTTTTTATTCTCATCAC 59.366 38.462 0.00 0.00 39.13 3.06
7296 16359 6.318648 ACGCTATTGGCTTTTTATTCTCATCA 59.681 34.615 0.00 0.00 39.13 3.07
7297 16360 6.634436 CACGCTATTGGCTTTTTATTCTCATC 59.366 38.462 0.00 0.00 39.13 2.92
7298 16361 6.498304 CACGCTATTGGCTTTTTATTCTCAT 58.502 36.000 0.00 0.00 39.13 2.90
7299 16362 5.676079 GCACGCTATTGGCTTTTTATTCTCA 60.676 40.000 0.00 0.00 39.13 3.27
7310 16373 2.819595 CACCGCACGCTATTGGCT 60.820 61.111 0.00 0.00 39.13 4.75
7311 16374 3.095898 GACACCGCACGCTATTGGC 62.096 63.158 0.00 0.00 37.64 4.52
7327 16390 1.008881 CATCGCCATGCATGCAGAC 60.009 57.895 26.69 15.98 0.00 3.51
7328 16391 3.427670 CATCGCCATGCATGCAGA 58.572 55.556 26.69 20.55 0.00 4.26
7343 16406 2.091389 TCTCTTCAGCTAGGAGAGGCAT 60.091 50.000 16.73 0.00 33.04 4.40
7344 16407 1.286257 TCTCTTCAGCTAGGAGAGGCA 59.714 52.381 16.73 1.95 33.04 4.75
7348 16411 2.025416 ACTGCTCTCTTCAGCTAGGAGA 60.025 50.000 7.37 9.19 40.39 3.71
7349 16412 2.378038 ACTGCTCTCTTCAGCTAGGAG 58.622 52.381 0.00 0.00 40.39 3.69
7350 16413 2.523325 ACTGCTCTCTTCAGCTAGGA 57.477 50.000 0.00 0.00 40.39 2.94
7351 16414 3.005684 CCATACTGCTCTCTTCAGCTAGG 59.994 52.174 0.00 0.00 40.39 3.02
7352 16415 3.888323 TCCATACTGCTCTCTTCAGCTAG 59.112 47.826 0.00 0.00 40.39 3.42
7354 16417 2.744760 TCCATACTGCTCTCTTCAGCT 58.255 47.619 0.00 0.00 40.39 4.24
7355 16418 3.118811 AGTTCCATACTGCTCTCTTCAGC 60.119 47.826 0.00 0.00 40.13 4.26
7356 16419 4.402155 AGAGTTCCATACTGCTCTCTTCAG 59.598 45.833 0.00 0.00 37.17 3.02
7357 16420 4.159321 CAGAGTTCCATACTGCTCTCTTCA 59.841 45.833 0.00 0.00 37.17 3.02
7358 16421 4.159506 ACAGAGTTCCATACTGCTCTCTTC 59.840 45.833 0.00 0.00 37.17 2.87
7359 16422 4.093011 ACAGAGTTCCATACTGCTCTCTT 58.907 43.478 0.00 0.00 37.17 2.85
7360 16423 3.707316 ACAGAGTTCCATACTGCTCTCT 58.293 45.455 0.00 0.00 37.17 3.10
7361 16424 4.429108 GAACAGAGTTCCATACTGCTCTC 58.571 47.826 0.00 0.00 37.17 3.20
7364 16427 3.177228 AGGAACAGAGTTCCATACTGCT 58.823 45.455 25.72 5.46 41.00 4.24
7365 16428 3.618690 AGGAACAGAGTTCCATACTGC 57.381 47.619 25.72 2.65 41.00 4.40
7367 16430 5.310857 AGGAAAAGGAACAGAGTTCCATACT 59.689 40.000 25.72 16.26 40.23 2.12
7368 16431 5.561679 AGGAAAAGGAACAGAGTTCCATAC 58.438 41.667 25.72 14.65 40.23 2.39
7369 16432 5.843019 AGGAAAAGGAACAGAGTTCCATA 57.157 39.130 25.72 0.00 40.23 2.74
7416 19606 2.095372 GGTGTAAACATAGCCGAACAGC 59.905 50.000 0.00 0.00 0.00 4.40
7417 19607 3.331150 TGGTGTAAACATAGCCGAACAG 58.669 45.455 0.00 0.00 0.00 3.16
7419 19609 4.752661 TTTGGTGTAAACATAGCCGAAC 57.247 40.909 0.00 0.00 0.00 3.95
7449 19647 4.472286 ACACGTAAACATAAACATGCAGC 58.528 39.130 0.00 0.00 0.00 5.25
7457 19655 8.169910 GCATGTACACATACACGTAAACATAAA 58.830 33.333 0.00 0.00 44.11 1.40
7458 19656 7.331193 TGCATGTACACATACACGTAAACATAA 59.669 33.333 0.00 0.00 44.11 1.90
7484 19682 4.616604 GCAACACATTACACATGCTGACAT 60.617 41.667 0.00 0.00 36.79 3.06
7485 19683 3.304592 GCAACACATTACACATGCTGACA 60.305 43.478 0.00 0.00 0.00 3.58
7486 19684 3.236816 GCAACACATTACACATGCTGAC 58.763 45.455 0.00 0.00 0.00 3.51
7487 19685 2.883386 TGCAACACATTACACATGCTGA 59.117 40.909 0.00 0.00 34.97 4.26
7488 19686 2.981805 GTGCAACACATTACACATGCTG 59.018 45.455 0.00 0.00 32.99 4.41
7489 19687 2.030007 GGTGCAACACATTACACATGCT 60.030 45.455 0.00 0.00 39.98 3.79
7490 19688 2.327568 GGTGCAACACATTACACATGC 58.672 47.619 0.00 0.00 39.98 4.06
7491 19689 2.945278 GGGTGCAACACATTACACATG 58.055 47.619 3.06 0.00 42.56 3.21
7511 19709 9.651718 GGAAAGATACGTAGCTTTTCATTTATG 57.348 33.333 32.38 0.00 41.46 1.90
7513 19711 7.010738 CCGGAAAGATACGTAGCTTTTCATTTA 59.989 37.037 32.75 0.00 41.46 1.40
7523 19721 2.659387 GTAGCCGGAAAGATACGTAGC 58.341 52.381 5.05 1.72 0.00 3.58
7540 19738 6.615839 GCTTATATTTAGACAAAGCGGCGTAG 60.616 42.308 9.37 0.00 33.91 3.51
7544 19742 5.467063 AGAGCTTATATTTAGACAAAGCGGC 59.533 40.000 0.00 0.00 45.54 6.53
7579 19777 5.526846 ACGTTAGCGAACTTAGCTACTCTAT 59.473 40.000 5.81 0.00 45.64 1.98
7581 19779 3.688673 ACGTTAGCGAACTTAGCTACTCT 59.311 43.478 5.81 0.00 45.64 3.24
7582 19780 4.013582 ACGTTAGCGAACTTAGCTACTC 57.986 45.455 5.81 0.79 45.64 2.59
7584 19782 5.327891 ACTTACGTTAGCGAACTTAGCTAC 58.672 41.667 5.81 0.12 45.64 3.58
7615 19839 1.126079 CGACGTGTTGCTACTTTCGT 58.874 50.000 13.35 13.35 32.87 3.85
7634 19858 5.921004 AGATGCGATCTTAGCTGATTTTC 57.079 39.130 0.00 0.00 35.76 2.29
7659 19883 6.567050 TGGCGTAAGTTGTACTAATAAGAGG 58.433 40.000 0.00 0.00 41.68 3.69
7662 19886 7.431668 GTCTCTGGCGTAAGTTGTACTAATAAG 59.568 40.741 0.00 0.00 41.68 1.73
7663 19887 7.121759 AGTCTCTGGCGTAAGTTGTACTAATAA 59.878 37.037 0.00 0.00 41.68 1.40
7665 19889 5.418209 AGTCTCTGGCGTAAGTTGTACTAAT 59.582 40.000 0.00 0.00 41.68 1.73
7667 19891 4.330250 AGTCTCTGGCGTAAGTTGTACTA 58.670 43.478 0.00 0.00 41.68 1.82
7668 19892 3.155501 AGTCTCTGGCGTAAGTTGTACT 58.844 45.455 0.00 0.00 41.68 2.73
7669 19893 3.500014 GAGTCTCTGGCGTAAGTTGTAC 58.500 50.000 0.00 0.00 41.68 2.90
7670 19894 2.490903 GGAGTCTCTGGCGTAAGTTGTA 59.509 50.000 0.00 0.00 41.68 2.41
7671 19895 1.272769 GGAGTCTCTGGCGTAAGTTGT 59.727 52.381 0.00 0.00 41.68 3.32
7672 19896 1.272490 TGGAGTCTCTGGCGTAAGTTG 59.728 52.381 0.00 0.00 41.68 3.16
7673 19897 1.272769 GTGGAGTCTCTGGCGTAAGTT 59.727 52.381 0.00 0.00 41.68 2.66
7674 19898 0.889306 GTGGAGTCTCTGGCGTAAGT 59.111 55.000 0.00 0.00 41.68 2.24
7675 19899 1.135257 CAGTGGAGTCTCTGGCGTAAG 60.135 57.143 0.00 0.00 32.55 2.34
7676 19900 0.888619 CAGTGGAGTCTCTGGCGTAA 59.111 55.000 0.00 0.00 32.55 3.18
7677 19901 0.251209 ACAGTGGAGTCTCTGGCGTA 60.251 55.000 15.99 0.00 38.44 4.42
7678 19902 0.251209 TACAGTGGAGTCTCTGGCGT 60.251 55.000 15.99 0.00 38.44 5.68
7679 19903 0.171455 GTACAGTGGAGTCTCTGGCG 59.829 60.000 15.99 0.00 38.44 5.69
7680 19904 1.551452 AGTACAGTGGAGTCTCTGGC 58.449 55.000 15.99 10.41 38.44 4.85
7681 19905 4.608948 AAAAGTACAGTGGAGTCTCTGG 57.391 45.455 15.99 0.00 38.44 3.86
7682 19906 6.334102 ACTAAAAGTACAGTGGAGTCTCTG 57.666 41.667 12.05 12.05 39.59 3.35
7683 19907 6.324254 ACAACTAAAAGTACAGTGGAGTCTCT 59.676 38.462 0.00 0.00 0.00 3.10
7684 19908 6.514063 ACAACTAAAAGTACAGTGGAGTCTC 58.486 40.000 0.00 0.00 0.00 3.36
7755 19979 9.210426 CATGCATGATTAAGAAAACGTTAGTAC 57.790 33.333 22.59 0.00 0.00 2.73
7758 19982 6.692681 CCCATGCATGATTAAGAAAACGTTAG 59.307 38.462 28.31 4.56 0.00 2.34
7759 19983 6.151985 ACCCATGCATGATTAAGAAAACGTTA 59.848 34.615 28.31 0.00 0.00 3.18
7782 20006 3.196685 AGTCTAGAAGTCCAGCATTGACC 59.803 47.826 0.00 0.00 33.09 4.02
7788 20012 3.701542 CCACATAGTCTAGAAGTCCAGCA 59.298 47.826 0.00 0.00 0.00 4.41
7789 20013 3.068873 CCCACATAGTCTAGAAGTCCAGC 59.931 52.174 0.00 0.00 0.00 4.85
7790 20014 3.639094 CCCCACATAGTCTAGAAGTCCAG 59.361 52.174 0.00 0.00 0.00 3.86
7793 20017 3.031736 TGCCCCACATAGTCTAGAAGTC 58.968 50.000 0.00 0.00 0.00 3.01
7795 20019 2.766263 TGTGCCCCACATAGTCTAGAAG 59.234 50.000 0.00 0.00 39.62 2.85
7809 20033 3.129287 CAGTTCTCATAATGTTGTGCCCC 59.871 47.826 0.00 0.00 0.00 5.80
7822 20046 7.789026 TCATCTAATCACATGTCAGTTCTCAT 58.211 34.615 0.00 0.00 0.00 2.90
7824 20048 8.659925 ATTCATCTAATCACATGTCAGTTCTC 57.340 34.615 0.00 0.00 0.00 2.87
7830 20054 9.924650 CTCATCTATTCATCTAATCACATGTCA 57.075 33.333 0.00 0.00 0.00 3.58
7831 20055 9.926158 ACTCATCTATTCATCTAATCACATGTC 57.074 33.333 0.00 0.00 0.00 3.06
7847 20071 5.070580 GGCTGGGTACAACTACTCATCTATT 59.929 44.000 0.00 0.00 32.60 1.73
7848 20072 4.589374 GGCTGGGTACAACTACTCATCTAT 59.411 45.833 0.00 0.00 32.60 1.98
7852 20076 1.838077 GGGCTGGGTACAACTACTCAT 59.162 52.381 0.00 0.00 32.60 2.90
7853 20077 1.272807 GGGCTGGGTACAACTACTCA 58.727 55.000 0.00 0.00 32.06 3.41
7858 20082 1.198759 ATGACGGGCTGGGTACAACT 61.199 55.000 0.00 0.00 0.00 3.16
7873 20097 1.753073 CCTGGGCTTTTGATCCATGAC 59.247 52.381 0.00 0.00 0.00 3.06
7877 20101 1.146774 TCAACCTGGGCTTTTGATCCA 59.853 47.619 0.00 0.00 0.00 3.41
7878 20102 1.546029 GTCAACCTGGGCTTTTGATCC 59.454 52.381 0.00 0.00 32.10 3.36
7918 20142 3.691575 TCGGCAAAGACATATTTTCCCA 58.308 40.909 0.00 0.00 0.00 4.37
7953 20177 4.865365 AGTGCTCGATAAAAGACACTTAGC 59.135 41.667 0.00 0.00 34.89 3.09
7954 20178 6.693545 CCTAGTGCTCGATAAAAGACACTTAG 59.306 42.308 0.00 0.00 39.06 2.18
7955 20179 6.561614 CCTAGTGCTCGATAAAAGACACTTA 58.438 40.000 0.00 0.00 39.06 2.24
7956 20180 5.411781 CCTAGTGCTCGATAAAAGACACTT 58.588 41.667 0.00 0.00 39.06 3.16
7995 20220 2.762887 TGATGTTCCTCTAGGCACTCTG 59.237 50.000 0.56 0.00 41.75 3.35
8005 20230 3.636679 TCCTTCTCGATGATGTTCCTCT 58.363 45.455 0.00 0.00 0.00 3.69
8016 20241 2.969628 AACAGCGATTCCTTCTCGAT 57.030 45.000 0.00 0.00 38.38 3.59
8033 20258 7.596749 TCAAATCTTATCTGTTCCTCGAAAC 57.403 36.000 0.00 0.00 0.00 2.78
8037 20262 5.007136 GCCTTCAAATCTTATCTGTTCCTCG 59.993 44.000 0.00 0.00 0.00 4.63
8046 20274 7.009907 GTGATTGCTTTGCCTTCAAATCTTATC 59.990 37.037 0.00 0.00 40.97 1.75
8047 20275 6.815142 GTGATTGCTTTGCCTTCAAATCTTAT 59.185 34.615 0.00 0.00 40.97 1.73
8053 20281 4.099881 AGAAGTGATTGCTTTGCCTTCAAA 59.900 37.500 0.00 0.00 39.67 2.69
8070 20298 3.626028 AAGGCAAACGCTAAAGAAGTG 57.374 42.857 0.00 0.00 41.76 3.16
8071 20299 5.761165 TTTAAGGCAAACGCTAAAGAAGT 57.239 34.783 0.00 0.00 0.00 3.01
8149 20379 2.279935 ATGTAGCAAACGAACCCCAA 57.720 45.000 0.00 0.00 0.00 4.12
8150 20380 2.156098 GAATGTAGCAAACGAACCCCA 58.844 47.619 0.00 0.00 0.00 4.96
8156 20386 3.394674 TGGACTGAATGTAGCAAACGA 57.605 42.857 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.