Multiple sequence alignment - TraesCS4A01G272600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G272600 chr4A 100.000 5510 0 0 1 5510 583905671 583911180 0.000000e+00 10176.0
1 TraesCS4A01G272600 chr4A 81.373 102 11 5 1852 1947 742280797 742280698 5.920000e-10 76.8
2 TraesCS4A01G272600 chr4A 97.059 34 1 0 5256 5289 153665612 153665645 2.140000e-04 58.4
3 TraesCS4A01G272600 chr4D 93.670 2496 137 13 2392 4883 16652435 16649957 0.000000e+00 3714.0
4 TraesCS4A01G272600 chr4D 84.240 882 63 31 1024 1882 16653948 16653120 0.000000e+00 789.0
5 TraesCS4A01G272600 chr4D 91.255 526 27 13 1881 2394 16653033 16652515 0.000000e+00 699.0
6 TraesCS4A01G272600 chr4D 86.486 222 12 6 303 511 16654785 16654569 1.540000e-55 228.0
7 TraesCS4A01G272600 chr4D 78.166 229 24 18 798 1024 16654179 16653975 7.500000e-24 122.0
8 TraesCS4A01G272600 chr4D 96.970 33 1 0 5205 5237 57080752 57080720 7.710000e-04 56.5
9 TraesCS4A01G272600 chr4B 92.454 2001 109 26 2392 4357 28617924 28615931 0.000000e+00 2820.0
10 TraesCS4A01G272600 chr4B 90.698 731 47 7 4344 5073 28615868 28615158 0.000000e+00 953.0
11 TraesCS4A01G272600 chr4B 87.573 684 57 12 1217 1882 28619261 28618588 0.000000e+00 767.0
12 TraesCS4A01G272600 chr4B 91.856 528 24 7 1881 2394 28618493 28617971 0.000000e+00 719.0
13 TraesCS4A01G272600 chr4B 84.553 369 23 21 5085 5451 28615110 28614774 8.840000e-88 335.0
14 TraesCS4A01G272600 chr4B 81.143 350 30 13 163 495 28620423 28620093 1.190000e-61 248.0
15 TraesCS4A01G272600 chr4B 90.141 71 5 2 4953 5022 396452824 396452893 2.110000e-14 91.6
16 TraesCS4A01G272600 chr4B 87.179 78 7 2 681 758 28619829 28619755 9.830000e-13 86.1
17 TraesCS4A01G272600 chr4B 100.000 29 0 0 483 511 28620091 28620063 3.000000e-03 54.7
18 TraesCS4A01G272600 chr1A 88.000 125 10 3 5073 5194 299485941 299485819 5.750000e-30 143.0
19 TraesCS4A01G272600 chr1A 93.878 49 1 2 1874 1922 155075302 155075256 7.660000e-09 73.1
20 TraesCS4A01G272600 chr1A 100.000 29 0 0 5205 5233 355622805 355622777 3.000000e-03 54.7
21 TraesCS4A01G272600 chr7D 81.818 176 19 5 5026 5190 18812992 18813165 9.630000e-28 135.0
22 TraesCS4A01G272600 chr7D 94.737 38 2 0 1842 1879 117208950 117208913 5.960000e-05 60.2
23 TraesCS4A01G272600 chr5A 91.837 98 7 1 5075 5172 671305205 671305301 9.630000e-28 135.0
24 TraesCS4A01G272600 chr5A 83.544 79 9 3 1868 1944 475527292 475527368 2.750000e-08 71.3
25 TraesCS4A01G272600 chr5D 81.461 178 19 6 5026 5190 281024727 281024551 3.460000e-27 134.0
26 TraesCS4A01G272600 chr5D 86.364 110 13 2 5081 5190 293168800 293168907 9.700000e-23 119.0
27 TraesCS4A01G272600 chr5D 95.385 65 2 1 4891 4954 298464389 298464453 9.760000e-18 102.0
28 TraesCS4A01G272600 chr5D 88.889 72 8 0 4957 5028 125988949 125988878 7.600000e-14 89.8
29 TraesCS4A01G272600 chr6D 91.781 73 6 0 4954 5026 51782214 51782142 9.760000e-18 102.0
30 TraesCS4A01G272600 chr6D 96.970 33 1 0 5205 5237 413046310 413046278 7.710000e-04 56.5
31 TraesCS4A01G272600 chr1B 92.857 70 5 0 4886 4955 447165776 447165845 9.760000e-18 102.0
32 TraesCS4A01G272600 chr1B 96.970 33 1 0 5205 5237 357924824 357924792 7.710000e-04 56.5
33 TraesCS4A01G272600 chr1B 100.000 29 0 0 5205 5233 622367253 622367281 3.000000e-03 54.7
34 TraesCS4A01G272600 chr6A 89.474 76 7 1 4954 5029 53880034 53880108 1.630000e-15 95.3
35 TraesCS4A01G272600 chr6A 97.297 37 1 0 5256 5292 147301967 147301931 4.610000e-06 63.9
36 TraesCS4A01G272600 chr5B 88.312 77 5 4 4953 5027 533980076 533980150 7.600000e-14 89.8
37 TraesCS4A01G272600 chr5B 95.455 44 2 0 1839 1882 584094544 584094501 2.750000e-08 71.3
38 TraesCS4A01G272600 chr7B 86.585 82 8 1 1839 1917 85134786 85134867 2.730000e-13 87.9
39 TraesCS4A01G272600 chr7B 86.420 81 8 2 4948 5027 700180749 700180671 9.830000e-13 86.1
40 TraesCS4A01G272600 chr3D 87.179 78 8 2 4954 5029 68054796 68054873 2.730000e-13 87.9
41 TraesCS4A01G272600 chr3D 91.667 60 5 0 4890 4949 20756269 20756328 3.540000e-12 84.2
42 TraesCS4A01G272600 chr3D 87.143 70 9 0 4885 4954 54221531 54221462 4.580000e-11 80.5
43 TraesCS4A01G272600 chr3D 95.833 48 1 1 1875 1922 67480814 67480768 5.920000e-10 76.8
44 TraesCS4A01G272600 chr3D 100.000 33 0 0 5257 5289 476564504 476564536 1.660000e-05 62.1
45 TraesCS4A01G272600 chr2B 86.747 83 5 5 4960 5040 461514703 461514781 2.730000e-13 87.9
46 TraesCS4A01G272600 chr3A 88.571 70 8 0 4886 4955 671657946 671657877 9.830000e-13 86.1
47 TraesCS4A01G272600 chr3A 91.667 48 2 2 1868 1915 63189426 63189471 1.280000e-06 65.8
48 TraesCS4A01G272600 chr6B 85.507 69 9 1 4886 4954 678207775 678207842 2.750000e-08 71.3
49 TraesCS4A01G272600 chr6B 100.000 29 0 0 5205 5233 225522101 225522073 3.000000e-03 54.7
50 TraesCS4A01G272600 chr7A 97.500 40 1 0 1842 1881 577447974 577447935 9.900000e-08 69.4
51 TraesCS4A01G272600 chr7A 94.595 37 2 0 5256 5292 700101970 700101934 2.140000e-04 58.4
52 TraesCS4A01G272600 chr3B 88.889 54 5 1 1840 1892 578816176 578816229 1.280000e-06 65.8
53 TraesCS4A01G272600 chr2D 95.238 42 1 1 1878 1919 73403011 73403051 1.280000e-06 65.8
54 TraesCS4A01G272600 chr2D 100.000 29 0 0 5205 5233 53545330 53545358 3.000000e-03 54.7
55 TraesCS4A01G272600 chr2D 100.000 28 0 0 1853 1880 372976216 372976243 1.000000e-02 52.8
56 TraesCS4A01G272600 chr1D 87.500 56 7 0 4886 4941 95561644 95561589 1.280000e-06 65.8
57 TraesCS4A01G272600 chr1D 91.489 47 2 1 5256 5300 52692432 52692478 4.610000e-06 63.9
58 TraesCS4A01G272600 chrUn 97.059 34 1 0 5256 5289 87950549 87950582 2.140000e-04 58.4
59 TraesCS4A01G272600 chr2A 96.970 33 0 1 5380 5411 2692295 2692263 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G272600 chr4A 583905671 583911180 5509 False 10176.00 10176 100.0000 1 5510 1 chr4A.!!$F2 5509
1 TraesCS4A01G272600 chr4D 16649957 16654785 4828 True 1110.40 3714 86.7634 303 4883 5 chr4D.!!$R2 4580
2 TraesCS4A01G272600 chr4B 28614774 28620423 5649 True 747.85 2820 89.4320 163 5451 8 chr4B.!!$R1 5288

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.036732 TTCTTCAGGGCGCATTCTGT 59.963 50.000 10.83 0.0 33.13 3.41 F
901 1082 0.108992 CACCGCCGAAGCAACTAGTA 60.109 55.000 0.00 0.0 39.83 1.82 F
1136 1383 0.672401 CCTTCGCCTTCGCCAACTAA 60.672 55.000 0.00 0.0 35.26 2.24 F
3085 3637 0.302890 GCATGTGCATACGCTCACTC 59.697 55.000 0.00 0.0 43.87 3.51 F
3699 4251 1.205893 CCCAAAGAGAAGTCGCTAGCT 59.794 52.381 13.93 0.0 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1527 1821 0.171903 ACGGTAAATCAGACGTCCCG 59.828 55.000 20.72 20.72 39.75 5.14 R
2521 3066 2.754552 TGAACAGTTGGCTCCATAATGC 59.245 45.455 0.00 0.00 0.00 3.56 R
3097 3649 0.583438 CGTTTAGCTGCATCATCCCG 59.417 55.000 1.02 0.00 0.00 5.14 R
4137 4716 0.237235 GTTCGTCGGATTTGCAAGCA 59.763 50.000 0.00 0.00 0.00 3.91 R
5490 6186 0.761802 GGATGCGGGAGGAAGAAGAT 59.238 55.000 0.00 0.00 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.401058 ACCATTGATCTTATTAGGTTTCTTCAG 57.599 33.333 0.00 0.00 0.00 3.02
29 30 8.844244 CCATTGATCTTATTAGGTTTCTTCAGG 58.156 37.037 0.00 0.00 0.00 3.86
30 31 8.844244 CATTGATCTTATTAGGTTTCTTCAGGG 58.156 37.037 0.00 0.00 0.00 4.45
31 32 6.357367 TGATCTTATTAGGTTTCTTCAGGGC 58.643 40.000 0.00 0.00 0.00 5.19
32 33 4.766375 TCTTATTAGGTTTCTTCAGGGCG 58.234 43.478 0.00 0.00 0.00 6.13
33 34 1.751437 ATTAGGTTTCTTCAGGGCGC 58.249 50.000 0.00 0.00 0.00 6.53
34 35 0.398696 TTAGGTTTCTTCAGGGCGCA 59.601 50.000 10.83 0.00 0.00 6.09
35 36 0.618458 TAGGTTTCTTCAGGGCGCAT 59.382 50.000 10.83 0.00 0.00 4.73
36 37 0.251341 AGGTTTCTTCAGGGCGCATT 60.251 50.000 10.83 0.00 0.00 3.56
37 38 0.171231 GGTTTCTTCAGGGCGCATTC 59.829 55.000 10.83 0.00 0.00 2.67
38 39 1.168714 GTTTCTTCAGGGCGCATTCT 58.831 50.000 10.83 0.00 0.00 2.40
39 40 1.135575 GTTTCTTCAGGGCGCATTCTG 60.136 52.381 10.83 13.81 0.00 3.02
40 41 0.036732 TTCTTCAGGGCGCATTCTGT 59.963 50.000 10.83 0.00 33.13 3.41
41 42 0.036732 TCTTCAGGGCGCATTCTGTT 59.963 50.000 10.83 0.00 33.13 3.16
42 43 0.883833 CTTCAGGGCGCATTCTGTTT 59.116 50.000 10.83 0.00 33.13 2.83
43 44 0.597568 TTCAGGGCGCATTCTGTTTG 59.402 50.000 10.83 0.00 33.13 2.93
44 45 1.444895 CAGGGCGCATTCTGTTTGC 60.445 57.895 10.83 0.00 36.74 3.68
45 46 1.604593 AGGGCGCATTCTGTTTGCT 60.605 52.632 10.83 0.00 37.96 3.91
46 47 1.444895 GGGCGCATTCTGTTTGCTG 60.445 57.895 10.83 0.00 37.96 4.41
47 48 1.580942 GGCGCATTCTGTTTGCTGA 59.419 52.632 10.83 0.00 37.96 4.26
48 49 0.730494 GGCGCATTCTGTTTGCTGAC 60.730 55.000 10.83 0.00 37.96 3.51
49 50 0.730494 GCGCATTCTGTTTGCTGACC 60.730 55.000 0.30 0.00 37.96 4.02
50 51 0.877071 CGCATTCTGTTTGCTGACCT 59.123 50.000 0.00 0.00 37.96 3.85
51 52 1.400629 CGCATTCTGTTTGCTGACCTG 60.401 52.381 0.00 0.00 37.96 4.00
52 53 1.881973 GCATTCTGTTTGCTGACCTGA 59.118 47.619 0.00 0.00 37.14 3.86
53 54 2.490903 GCATTCTGTTTGCTGACCTGAT 59.509 45.455 0.00 0.00 37.14 2.90
54 55 3.427233 GCATTCTGTTTGCTGACCTGATC 60.427 47.826 0.00 0.00 37.14 2.92
55 56 3.490439 TTCTGTTTGCTGACCTGATCA 57.510 42.857 0.00 0.00 35.45 2.92
56 57 3.708403 TCTGTTTGCTGACCTGATCAT 57.292 42.857 0.00 0.00 36.48 2.45
57 58 3.603532 TCTGTTTGCTGACCTGATCATC 58.396 45.455 0.00 0.00 36.48 2.92
58 59 3.008266 TCTGTTTGCTGACCTGATCATCA 59.992 43.478 0.00 0.00 36.48 3.07
59 60 3.753815 TGTTTGCTGACCTGATCATCAA 58.246 40.909 0.00 0.00 40.76 2.57
60 61 4.143543 TGTTTGCTGACCTGATCATCAAA 58.856 39.130 0.00 0.00 46.25 2.69
62 63 4.976224 TTGCTGACCTGATCATCAAATG 57.024 40.909 0.00 0.00 39.81 2.32
63 64 4.224991 TGCTGACCTGATCATCAAATGA 57.775 40.909 0.00 0.00 44.55 2.57
64 65 4.591929 TGCTGACCTGATCATCAAATGAA 58.408 39.130 0.00 0.00 43.50 2.57
65 66 5.011586 TGCTGACCTGATCATCAAATGAAA 58.988 37.500 0.00 0.00 43.50 2.69
66 67 5.655090 TGCTGACCTGATCATCAAATGAAAT 59.345 36.000 0.00 0.00 43.50 2.17
67 68 5.977725 GCTGACCTGATCATCAAATGAAATG 59.022 40.000 0.00 0.00 43.50 2.32
68 69 5.898174 TGACCTGATCATCAAATGAAATGC 58.102 37.500 0.00 0.00 43.50 3.56
69 70 5.163488 TGACCTGATCATCAAATGAAATGCC 60.163 40.000 0.00 0.00 43.50 4.40
70 71 4.712829 ACCTGATCATCAAATGAAATGCCA 59.287 37.500 0.00 0.00 43.50 4.92
71 72 5.188163 ACCTGATCATCAAATGAAATGCCAA 59.812 36.000 0.00 0.00 43.50 4.52
72 73 5.522460 CCTGATCATCAAATGAAATGCCAAC 59.478 40.000 0.00 0.00 43.50 3.77
73 74 6.288941 TGATCATCAAATGAAATGCCAACT 57.711 33.333 0.00 0.00 43.50 3.16
74 75 6.103330 TGATCATCAAATGAAATGCCAACTG 58.897 36.000 0.00 0.00 43.50 3.16
75 76 4.823157 TCATCAAATGAAATGCCAACTGG 58.177 39.130 0.00 0.00 36.11 4.00
76 77 4.527427 TCATCAAATGAAATGCCAACTGGA 59.473 37.500 0.00 0.00 36.11 3.86
77 78 5.188163 TCATCAAATGAAATGCCAACTGGAT 59.812 36.000 0.00 0.00 36.11 3.41
78 79 5.486735 TCAAATGAAATGCCAACTGGATT 57.513 34.783 0.00 0.00 37.39 3.01
79 80 6.602410 TCAAATGAAATGCCAACTGGATTA 57.398 33.333 0.00 0.00 37.39 1.75
80 81 6.397272 TCAAATGAAATGCCAACTGGATTAC 58.603 36.000 0.00 0.00 37.39 1.89
81 82 5.343307 AATGAAATGCCAACTGGATTACC 57.657 39.130 0.00 0.00 37.39 2.85
82 83 4.046286 TGAAATGCCAACTGGATTACCT 57.954 40.909 0.00 0.00 37.39 3.08
83 84 3.763360 TGAAATGCCAACTGGATTACCTG 59.237 43.478 0.00 0.00 40.30 4.00
84 85 1.767759 ATGCCAACTGGATTACCTGC 58.232 50.000 0.00 0.00 38.45 4.85
85 86 0.323360 TGCCAACTGGATTACCTGCC 60.323 55.000 0.00 0.00 38.45 4.85
86 87 1.037579 GCCAACTGGATTACCTGCCC 61.038 60.000 0.00 0.00 38.45 5.36
87 88 0.625849 CCAACTGGATTACCTGCCCT 59.374 55.000 0.00 0.00 38.45 5.19
88 89 1.683011 CCAACTGGATTACCTGCCCTG 60.683 57.143 0.00 0.00 38.45 4.45
89 90 1.281867 CAACTGGATTACCTGCCCTGA 59.718 52.381 0.00 0.00 38.45 3.86
90 91 1.668826 ACTGGATTACCTGCCCTGAA 58.331 50.000 0.00 0.00 38.45 3.02
91 92 1.992557 ACTGGATTACCTGCCCTGAAA 59.007 47.619 0.00 0.00 38.45 2.69
92 93 2.378547 ACTGGATTACCTGCCCTGAAAA 59.621 45.455 0.00 0.00 38.45 2.29
93 94 2.755103 CTGGATTACCTGCCCTGAAAAC 59.245 50.000 0.00 0.00 37.04 2.43
94 95 2.378547 TGGATTACCTGCCCTGAAAACT 59.621 45.455 0.00 0.00 37.04 2.66
95 96 2.755103 GGATTACCTGCCCTGAAAACTG 59.245 50.000 0.00 0.00 0.00 3.16
96 97 2.286365 TTACCTGCCCTGAAAACTGG 57.714 50.000 0.00 0.00 0.00 4.00
97 98 1.440618 TACCTGCCCTGAAAACTGGA 58.559 50.000 0.00 0.00 0.00 3.86
98 99 0.555769 ACCTGCCCTGAAAACTGGAA 59.444 50.000 0.00 0.00 0.00 3.53
99 100 1.147817 ACCTGCCCTGAAAACTGGAAT 59.852 47.619 0.00 0.00 0.00 3.01
100 101 1.547372 CCTGCCCTGAAAACTGGAATG 59.453 52.381 0.00 0.00 0.00 2.67
101 102 2.517959 CTGCCCTGAAAACTGGAATGA 58.482 47.619 0.00 0.00 0.00 2.57
102 103 2.490903 CTGCCCTGAAAACTGGAATGAG 59.509 50.000 0.00 0.00 0.00 2.90
103 104 2.108075 TGCCCTGAAAACTGGAATGAGA 59.892 45.455 0.00 0.00 0.00 3.27
104 105 3.245371 TGCCCTGAAAACTGGAATGAGAT 60.245 43.478 0.00 0.00 0.00 2.75
105 106 3.766051 GCCCTGAAAACTGGAATGAGATT 59.234 43.478 0.00 0.00 0.00 2.40
106 107 4.221482 GCCCTGAAAACTGGAATGAGATTT 59.779 41.667 0.00 0.00 0.00 2.17
107 108 5.418840 GCCCTGAAAACTGGAATGAGATTTA 59.581 40.000 0.00 0.00 0.00 1.40
108 109 6.071391 GCCCTGAAAACTGGAATGAGATTTAA 60.071 38.462 0.00 0.00 0.00 1.52
109 110 7.542025 CCCTGAAAACTGGAATGAGATTTAAG 58.458 38.462 0.00 0.00 0.00 1.85
110 111 7.363268 CCCTGAAAACTGGAATGAGATTTAAGG 60.363 40.741 0.00 0.00 36.63 2.69
111 112 7.177392 CCTGAAAACTGGAATGAGATTTAAGGT 59.823 37.037 0.00 0.00 34.05 3.50
112 113 8.110860 TGAAAACTGGAATGAGATTTAAGGTC 57.889 34.615 0.00 0.00 0.00 3.85
113 114 7.176690 TGAAAACTGGAATGAGATTTAAGGTCC 59.823 37.037 0.00 0.00 0.00 4.46
114 115 5.117406 ACTGGAATGAGATTTAAGGTCCC 57.883 43.478 0.00 0.00 0.00 4.46
115 116 4.130118 CTGGAATGAGATTTAAGGTCCCG 58.870 47.826 0.00 0.00 0.00 5.14
116 117 3.521937 TGGAATGAGATTTAAGGTCCCGT 59.478 43.478 0.00 0.00 0.00 5.28
117 118 3.877508 GGAATGAGATTTAAGGTCCCGTG 59.122 47.826 0.00 0.00 0.00 4.94
118 119 4.514401 GAATGAGATTTAAGGTCCCGTGT 58.486 43.478 0.00 0.00 0.00 4.49
119 120 3.328382 TGAGATTTAAGGTCCCGTGTG 57.672 47.619 0.00 0.00 0.00 3.82
120 121 2.901192 TGAGATTTAAGGTCCCGTGTGA 59.099 45.455 0.00 0.00 0.00 3.58
121 122 3.517901 TGAGATTTAAGGTCCCGTGTGAT 59.482 43.478 0.00 0.00 0.00 3.06
122 123 4.019681 TGAGATTTAAGGTCCCGTGTGATT 60.020 41.667 0.00 0.00 0.00 2.57
123 124 4.918588 AGATTTAAGGTCCCGTGTGATTT 58.081 39.130 0.00 0.00 0.00 2.17
124 125 6.057321 AGATTTAAGGTCCCGTGTGATTTA 57.943 37.500 0.00 0.00 0.00 1.40
125 126 5.878669 AGATTTAAGGTCCCGTGTGATTTAC 59.121 40.000 0.00 0.00 0.00 2.01
126 127 4.895668 TTAAGGTCCCGTGTGATTTACT 57.104 40.909 0.00 0.00 0.00 2.24
127 128 5.999205 TTAAGGTCCCGTGTGATTTACTA 57.001 39.130 0.00 0.00 0.00 1.82
128 129 6.549433 TTAAGGTCCCGTGTGATTTACTAT 57.451 37.500 0.00 0.00 0.00 2.12
129 130 4.402056 AGGTCCCGTGTGATTTACTATG 57.598 45.455 0.00 0.00 0.00 2.23
130 131 4.028131 AGGTCCCGTGTGATTTACTATGA 58.972 43.478 0.00 0.00 0.00 2.15
131 132 4.654262 AGGTCCCGTGTGATTTACTATGAT 59.346 41.667 0.00 0.00 0.00 2.45
132 133 4.989168 GGTCCCGTGTGATTTACTATGATC 59.011 45.833 0.00 0.00 0.00 2.92
133 134 5.452776 GGTCCCGTGTGATTTACTATGATCA 60.453 44.000 0.00 0.00 0.00 2.92
134 135 6.046593 GTCCCGTGTGATTTACTATGATCAA 58.953 40.000 0.00 0.00 34.34 2.57
135 136 6.018994 GTCCCGTGTGATTTACTATGATCAAC 60.019 42.308 0.00 0.00 34.34 3.18
136 137 6.049149 CCCGTGTGATTTACTATGATCAACT 58.951 40.000 0.00 0.00 34.34 3.16
137 138 6.538742 CCCGTGTGATTTACTATGATCAACTT 59.461 38.462 0.00 0.00 34.34 2.66
138 139 7.401860 CCGTGTGATTTACTATGATCAACTTG 58.598 38.462 0.00 0.00 34.34 3.16
139 140 6.901887 CGTGTGATTTACTATGATCAACTTGC 59.098 38.462 0.00 0.00 34.34 4.01
140 141 7.412891 CGTGTGATTTACTATGATCAACTTGCA 60.413 37.037 0.00 0.00 34.34 4.08
141 142 7.907045 GTGTGATTTACTATGATCAACTTGCAG 59.093 37.037 0.00 0.00 34.34 4.41
142 143 7.823799 TGTGATTTACTATGATCAACTTGCAGA 59.176 33.333 0.00 0.00 34.34 4.26
143 144 8.834465 GTGATTTACTATGATCAACTTGCAGAT 58.166 33.333 0.00 0.00 34.34 2.90
144 145 9.399797 TGATTTACTATGATCAACTTGCAGATT 57.600 29.630 0.00 0.00 29.82 2.40
149 150 8.218338 ACTATGATCAACTTGCAGATTTAAGG 57.782 34.615 0.00 0.00 0.00 2.69
150 151 7.831193 ACTATGATCAACTTGCAGATTTAAGGT 59.169 33.333 0.00 0.00 0.00 3.50
151 152 6.500684 TGATCAACTTGCAGATTTAAGGTC 57.499 37.500 0.00 0.00 0.00 3.85
152 153 5.415701 TGATCAACTTGCAGATTTAAGGTCC 59.584 40.000 0.00 0.00 0.00 4.46
153 154 4.079253 TCAACTTGCAGATTTAAGGTCCC 58.921 43.478 0.00 0.00 0.00 4.46
154 155 2.711542 ACTTGCAGATTTAAGGTCCCG 58.288 47.619 0.00 0.00 0.00 5.14
155 156 2.039879 ACTTGCAGATTTAAGGTCCCGT 59.960 45.455 0.00 0.00 0.00 5.28
156 157 2.107950 TGCAGATTTAAGGTCCCGTG 57.892 50.000 0.00 0.00 0.00 4.94
157 158 1.349688 TGCAGATTTAAGGTCCCGTGT 59.650 47.619 0.00 0.00 0.00 4.49
158 159 2.007608 GCAGATTTAAGGTCCCGTGTC 58.992 52.381 0.00 0.00 0.00 3.67
159 160 2.614481 GCAGATTTAAGGTCCCGTGTCA 60.614 50.000 0.00 0.00 0.00 3.58
160 161 3.670625 CAGATTTAAGGTCCCGTGTCAA 58.329 45.455 0.00 0.00 0.00 3.18
161 162 4.261801 CAGATTTAAGGTCCCGTGTCAAT 58.738 43.478 0.00 0.00 0.00 2.57
180 181 6.604396 TGTCAATTCCTTCCGTATGTAGAGTA 59.396 38.462 0.00 0.00 0.00 2.59
192 193 6.432162 CCGTATGTAGAGTATGCTTTACCCTA 59.568 42.308 8.68 0.00 32.98 3.53
197 198 4.884247 AGAGTATGCTTTACCCTATTCGC 58.116 43.478 0.00 0.00 0.00 4.70
214 218 6.587990 CCTATTCGCTGAATATTGTGGAGTAG 59.412 42.308 10.13 0.00 34.57 2.57
216 220 5.188327 TCGCTGAATATTGTGGAGTAGAG 57.812 43.478 0.00 0.00 0.00 2.43
221 225 6.818644 GCTGAATATTGTGGAGTAGAGTTTGA 59.181 38.462 0.00 0.00 0.00 2.69
222 226 7.497249 GCTGAATATTGTGGAGTAGAGTTTGAT 59.503 37.037 0.00 0.00 0.00 2.57
225 229 8.511604 AATATTGTGGAGTAGAGTTTGATTGG 57.488 34.615 0.00 0.00 0.00 3.16
269 273 6.396459 GTACGACACGAAGTAGTAGTAAGT 57.604 41.667 0.00 0.00 41.61 2.24
270 274 5.931441 ACGACACGAAGTAGTAGTAAGTT 57.069 39.130 0.00 0.00 41.61 2.66
271 275 7.950236 GTACGACACGAAGTAGTAGTAAGTTA 58.050 38.462 0.00 0.00 41.61 2.24
273 277 6.647067 ACGACACGAAGTAGTAGTAAGTTAGT 59.353 38.462 0.00 0.00 41.61 2.24
276 280 9.748100 GACACGAAGTAGTAGTAAGTTAGTAAC 57.252 37.037 4.78 4.78 41.61 2.50
278 282 9.535270 CACGAAGTAGTAGTAAGTTAGTAACAC 57.465 37.037 15.28 5.69 41.61 3.32
279 283 8.436200 ACGAAGTAGTAGTAAGTTAGTAACACG 58.564 37.037 15.28 7.80 41.94 4.49
280 284 7.900352 CGAAGTAGTAGTAAGTTAGTAACACGG 59.100 40.741 15.28 0.00 0.00 4.94
281 285 8.622948 AAGTAGTAGTAAGTTAGTAACACGGT 57.377 34.615 15.28 0.30 0.00 4.83
282 286 9.720769 AAGTAGTAGTAAGTTAGTAACACGGTA 57.279 33.333 15.28 0.00 0.00 4.02
283 287 9.152595 AGTAGTAGTAAGTTAGTAACACGGTAC 57.847 37.037 15.28 10.49 0.00 3.34
284 288 7.979444 AGTAGTAAGTTAGTAACACGGTACA 57.021 36.000 15.28 1.89 0.00 2.90
285 289 7.807680 AGTAGTAAGTTAGTAACACGGTACAC 58.192 38.462 15.28 10.84 0.00 2.90
318 325 6.521527 AATACTAATCCCAATGAAGGCTCT 57.478 37.500 0.00 0.00 0.00 4.09
320 327 3.782523 ACTAATCCCAATGAAGGCTCTCA 59.217 43.478 0.00 0.00 0.00 3.27
321 328 3.967467 AATCCCAATGAAGGCTCTCAT 57.033 42.857 6.42 6.42 37.66 2.90
327 334 2.943690 CAATGAAGGCTCTCATCACCAG 59.056 50.000 11.01 0.00 34.90 4.00
343 358 2.227388 CACCAGTGGATTTCAGCTGTTC 59.773 50.000 18.40 9.33 0.00 3.18
359 374 2.693762 TTCCCGCACGTACTCGAGG 61.694 63.158 18.41 1.00 40.62 4.63
385 400 2.444706 AGCCAGGCTATCTGCGGA 60.445 61.111 14.18 0.00 44.05 5.54
396 411 1.870055 ATCTGCGGACGTACGTGGTT 61.870 55.000 28.16 0.00 35.98 3.67
412 427 3.310774 CGTGGTTGAGATGGATAAGCAAG 59.689 47.826 0.00 0.00 34.15 4.01
413 428 3.065925 GTGGTTGAGATGGATAAGCAAGC 59.934 47.826 0.00 0.00 37.44 4.01
414 429 3.282021 GGTTGAGATGGATAAGCAAGCA 58.718 45.455 0.00 0.00 37.05 3.91
458 473 2.421314 CTGCACCACAGGACACGA 59.579 61.111 0.00 0.00 43.19 4.35
461 476 1.110518 TGCACCACAGGACACGAGTA 61.111 55.000 0.00 0.00 0.00 2.59
462 477 0.246635 GCACCACAGGACACGAGTAT 59.753 55.000 0.00 0.00 0.00 2.12
464 479 1.272490 CACCACAGGACACGAGTATGT 59.728 52.381 0.00 0.00 34.78 2.29
465 480 1.272490 ACCACAGGACACGAGTATGTG 59.728 52.381 18.06 18.06 45.41 3.21
527 582 2.359792 CATACGATACGGATGGCGC 58.640 57.895 0.00 0.00 43.64 6.53
548 647 3.680786 GGTTTTGTCCCGCCTGCC 61.681 66.667 0.00 0.00 0.00 4.85
560 659 2.813908 CCTGCCCGTGTAAGTCGC 60.814 66.667 0.00 0.00 0.00 5.19
561 660 2.813908 CTGCCCGTGTAAGTCGCC 60.814 66.667 0.00 0.00 0.00 5.54
562 661 4.728102 TGCCCGTGTAAGTCGCCG 62.728 66.667 0.00 0.00 0.00 6.46
563 662 4.729856 GCCCGTGTAAGTCGCCGT 62.730 66.667 0.00 0.00 0.00 5.68
567 666 1.513586 CGTGTAAGTCGCCGTCTCC 60.514 63.158 0.00 0.00 0.00 3.71
569 668 0.179169 GTGTAAGTCGCCGTCTCCTC 60.179 60.000 0.00 0.00 0.00 3.71
570 669 1.310933 TGTAAGTCGCCGTCTCCTCC 61.311 60.000 0.00 0.00 0.00 4.30
571 670 2.110967 TAAGTCGCCGTCTCCTCCG 61.111 63.158 0.00 0.00 0.00 4.63
572 671 2.809861 TAAGTCGCCGTCTCCTCCGT 62.810 60.000 0.00 0.00 0.00 4.69
579 678 2.438795 GTCTCCTCCGTCGAGCCT 60.439 66.667 0.00 0.00 34.49 4.58
619 726 4.778143 AGCGCCGCTAAACCCCAG 62.778 66.667 11.29 0.00 36.99 4.45
671 780 2.047179 AAAACCTCCTCTCGGCGC 60.047 61.111 0.00 0.00 0.00 6.53
697 823 4.873810 TGCACACACGCCTGGCTT 62.874 61.111 17.92 4.00 0.00 4.35
706 832 3.066814 GCCTGGCTTTGGCTCTGG 61.067 66.667 12.43 0.00 46.38 3.86
707 833 3.066814 CCTGGCTTTGGCTCTGGC 61.067 66.667 0.00 0.00 38.73 4.85
708 834 2.035312 CTGGCTTTGGCTCTGGCT 59.965 61.111 0.00 0.00 38.73 4.75
709 835 2.282674 TGGCTTTGGCTCTGGCTG 60.283 61.111 0.00 0.00 38.73 4.85
745 871 3.264897 CGAGCGAAATCCCAGCGG 61.265 66.667 0.00 0.00 35.78 5.52
746 872 2.125106 GAGCGAAATCCCAGCGGT 60.125 61.111 0.00 0.00 38.56 5.68
747 873 2.436646 AGCGAAATCCCAGCGGTG 60.437 61.111 7.86 7.86 34.21 4.94
748 874 3.508840 GCGAAATCCCAGCGGTGG 61.509 66.667 26.78 26.78 44.56 4.61
783 909 4.166011 GCGCGCAGGGATGTCAAC 62.166 66.667 29.10 0.00 46.37 3.18
793 919 2.108952 AGGGATGTCAACAGAAAAGGCT 59.891 45.455 0.00 0.00 0.00 4.58
794 920 2.489722 GGGATGTCAACAGAAAAGGCTC 59.510 50.000 0.00 0.00 0.00 4.70
795 921 3.416156 GGATGTCAACAGAAAAGGCTCT 58.584 45.455 0.00 0.00 0.00 4.09
796 922 3.190118 GGATGTCAACAGAAAAGGCTCTG 59.810 47.826 1.06 1.06 46.94 3.35
813 994 3.279875 GGCTTATTCCGGCGCAGG 61.280 66.667 21.57 21.57 0.00 4.85
814 995 2.203015 GCTTATTCCGGCGCAGGA 60.203 61.111 26.07 26.07 38.79 3.86
868 1049 3.410628 ACCCGCCCTGCATCATCA 61.411 61.111 0.00 0.00 0.00 3.07
869 1050 2.593725 CCCGCCCTGCATCATCAG 60.594 66.667 0.00 0.00 0.00 2.90
872 1053 2.515523 GCCCTGCATCATCAGCGT 60.516 61.111 0.00 0.00 32.87 5.07
883 1064 2.882677 ATCAGCGTGCACTCCACCA 61.883 57.895 16.19 0.00 41.53 4.17
896 1077 4.025401 CACCACCGCCGAAGCAAC 62.025 66.667 0.00 0.00 39.83 4.17
897 1078 4.250305 ACCACCGCCGAAGCAACT 62.250 61.111 0.00 0.00 39.83 3.16
899 1080 2.100631 CCACCGCCGAAGCAACTAG 61.101 63.158 0.00 0.00 39.83 2.57
900 1081 1.374252 CACCGCCGAAGCAACTAGT 60.374 57.895 0.00 0.00 39.83 2.57
901 1082 0.108992 CACCGCCGAAGCAACTAGTA 60.109 55.000 0.00 0.00 39.83 1.82
913 1104 1.134670 CAACTAGTAGCAGCCAGACCC 60.135 57.143 0.00 0.00 0.00 4.46
914 1105 1.038130 ACTAGTAGCAGCCAGACCCG 61.038 60.000 0.00 0.00 0.00 5.28
916 1107 4.162690 GTAGCAGCCAGACCCGGG 62.163 72.222 22.25 22.25 0.00 5.73
1128 1375 1.866925 GAAACCACCTTCGCCTTCG 59.133 57.895 0.00 0.00 0.00 3.79
1131 1378 4.697756 CCACCTTCGCCTTCGCCA 62.698 66.667 0.00 0.00 35.26 5.69
1136 1383 0.672401 CCTTCGCCTTCGCCAACTAA 60.672 55.000 0.00 0.00 35.26 2.24
1142 1389 2.223044 CGCCTTCGCCAACTAAGATTTC 60.223 50.000 0.00 0.00 0.00 2.17
1143 1390 2.747446 GCCTTCGCCAACTAAGATTTCA 59.253 45.455 0.00 0.00 0.00 2.69
1144 1391 3.378427 GCCTTCGCCAACTAAGATTTCAT 59.622 43.478 0.00 0.00 0.00 2.57
1145 1392 4.496507 GCCTTCGCCAACTAAGATTTCATC 60.497 45.833 0.00 0.00 0.00 2.92
1146 1393 4.878397 CCTTCGCCAACTAAGATTTCATCT 59.122 41.667 0.00 0.00 42.61 2.90
1147 1394 6.049149 CCTTCGCCAACTAAGATTTCATCTA 58.951 40.000 0.00 0.00 39.08 1.98
1148 1395 6.201806 CCTTCGCCAACTAAGATTTCATCTAG 59.798 42.308 0.00 0.00 39.08 2.43
1149 1396 5.601662 TCGCCAACTAAGATTTCATCTAGG 58.398 41.667 0.00 0.00 39.08 3.02
1150 1397 5.362717 TCGCCAACTAAGATTTCATCTAGGA 59.637 40.000 0.00 0.00 39.08 2.94
1151 1398 5.694006 CGCCAACTAAGATTTCATCTAGGAG 59.306 44.000 0.00 0.00 39.08 3.69
1152 1399 6.587273 GCCAACTAAGATTTCATCTAGGAGT 58.413 40.000 0.00 0.00 39.08 3.85
1153 1400 7.470147 CGCCAACTAAGATTTCATCTAGGAGTA 60.470 40.741 0.00 0.00 39.08 2.59
1154 1401 7.870445 GCCAACTAAGATTTCATCTAGGAGTAG 59.130 40.741 0.00 0.00 39.08 2.57
1187 1456 3.537206 AACAGTGAGCGTGAGGCCC 62.537 63.158 0.00 0.00 45.17 5.80
1314 1590 1.515736 GCTCTGCTCGCCAATTTGC 60.516 57.895 0.00 0.00 0.00 3.68
1315 1591 1.930908 GCTCTGCTCGCCAATTTGCT 61.931 55.000 0.00 0.00 0.00 3.91
1324 1600 2.504681 CAATTTGCTGCCGCCGAC 60.505 61.111 0.00 0.00 34.43 4.79
1351 1640 2.009755 GCGCGTACGGTATGCTCTC 61.010 63.158 25.11 13.23 40.57 3.20
1358 1647 1.442857 CGGTATGCTCTCGCGATCC 60.443 63.158 10.36 1.01 39.65 3.36
1380 1671 1.091771 CGCGCCAGATGTTCAGGATT 61.092 55.000 0.00 0.00 0.00 3.01
1381 1672 1.806247 CGCGCCAGATGTTCAGGATTA 60.806 52.381 0.00 0.00 0.00 1.75
1383 1674 2.487934 CGCCAGATGTTCAGGATTAGG 58.512 52.381 0.00 0.00 0.00 2.69
1384 1675 2.103094 CGCCAGATGTTCAGGATTAGGA 59.897 50.000 0.00 0.00 0.00 2.94
1385 1676 3.244353 CGCCAGATGTTCAGGATTAGGAT 60.244 47.826 0.00 0.00 0.00 3.24
1408 1699 2.885644 CTGATTCGACGGCGTGGG 60.886 66.667 21.19 9.65 38.98 4.61
1445 1736 3.436704 TCGAGCTGTTTTGCCAAGATAAG 59.563 43.478 0.00 0.00 0.00 1.73
1501 1795 1.346062 AGAGACGGATGGATGGATGG 58.654 55.000 0.00 0.00 0.00 3.51
1502 1796 1.133041 AGAGACGGATGGATGGATGGA 60.133 52.381 0.00 0.00 0.00 3.41
1503 1797 1.905215 GAGACGGATGGATGGATGGAT 59.095 52.381 0.00 0.00 0.00 3.41
1504 1798 1.627329 AGACGGATGGATGGATGGATG 59.373 52.381 0.00 0.00 0.00 3.51
1512 1806 1.228063 ATGGATGGATGCGGTGCTC 60.228 57.895 0.00 0.00 0.00 4.26
1527 1821 2.639286 CTCGCCAACCACTGCAAC 59.361 61.111 0.00 0.00 0.00 4.17
1600 1894 2.046313 GCACAGCAAATTTGTGTCTCG 58.954 47.619 19.03 10.99 45.89 4.04
1631 1925 2.351157 GGTTGAGCTGTGCATTCTGTTC 60.351 50.000 0.00 0.00 0.00 3.18
1640 1934 5.748152 GCTGTGCATTCTGTTCAACTTTTTA 59.252 36.000 0.00 0.00 0.00 1.52
1669 1968 8.893219 TCTTCATAGGATTATGTGTCAACATC 57.107 34.615 0.00 0.00 43.85 3.06
1690 1989 7.033791 ACATCGGATAAAACTGTACTGTACTG 58.966 38.462 19.36 19.36 0.00 2.74
1691 1990 5.404946 TCGGATAAAACTGTACTGTACTGC 58.595 41.667 20.46 6.94 0.00 4.40
1692 1991 5.184479 TCGGATAAAACTGTACTGTACTGCT 59.816 40.000 20.46 9.29 0.00 4.24
1709 2008 3.194062 CTGCTAGCTAACTTCTTCTGCC 58.806 50.000 17.23 0.00 0.00 4.85
1722 2021 5.479375 ACTTCTTCTGCCATGAATGTCAATT 59.521 36.000 0.00 0.00 0.00 2.32
1908 2304 8.959705 AAAAGGACTTATATTTAGGAACGGAG 57.040 34.615 0.00 0.00 0.00 4.63
1920 2316 6.460103 TTAGGAACGGAGGGAGTAGTATAT 57.540 41.667 0.00 0.00 0.00 0.86
1954 2352 6.811170 AGTTCTTCATTCTGTTTTCGCAAAAA 59.189 30.769 0.00 0.00 31.13 1.94
2061 2465 8.378172 TGTCCTGTACTGAAAATACTTTTCTG 57.622 34.615 14.06 14.06 47.00 3.02
2099 2503 2.814336 CCTCTGCACTAACCACCTTTTC 59.186 50.000 0.00 0.00 0.00 2.29
2100 2504 2.480419 CTCTGCACTAACCACCTTTTCG 59.520 50.000 0.00 0.00 0.00 3.46
2106 2518 4.504858 CACTAACCACCTTTTCGCTATCT 58.495 43.478 0.00 0.00 0.00 1.98
2187 2600 2.223618 GCCTTTGTGTTGACGCCTTTTA 60.224 45.455 0.00 0.00 0.00 1.52
2188 2601 3.552068 GCCTTTGTGTTGACGCCTTTTAT 60.552 43.478 0.00 0.00 0.00 1.40
2189 2602 4.616953 CCTTTGTGTTGACGCCTTTTATT 58.383 39.130 0.00 0.00 0.00 1.40
2190 2603 5.047188 CCTTTGTGTTGACGCCTTTTATTT 58.953 37.500 0.00 0.00 0.00 1.40
2416 2961 8.356657 TGTAGGTTTTTGTATGAATTTCCAGTG 58.643 33.333 0.00 0.00 0.00 3.66
2420 2965 7.148590 GGTTTTTGTATGAATTTCCAGTGATGC 60.149 37.037 0.00 0.00 0.00 3.91
2427 2972 3.880047 ATTTCCAGTGATGCAATGTGG 57.120 42.857 0.00 0.00 0.00 4.17
2434 2979 4.218200 CCAGTGATGCAATGTGGAACTAAA 59.782 41.667 0.00 0.00 38.04 1.85
2444 2989 6.071952 GCAATGTGGAACTAAAAGATCTTGGA 60.072 38.462 9.17 0.00 38.04 3.53
2454 2999 5.640189 AAAAGATCTTGGATTGCAGTGAG 57.360 39.130 9.17 0.00 0.00 3.51
2456 3001 5.426689 AAGATCTTGGATTGCAGTGAGTA 57.573 39.130 7.30 0.00 0.00 2.59
2461 3006 8.874156 AGATCTTGGATTGCAGTGAGTAATATA 58.126 33.333 0.00 0.00 32.33 0.86
2470 3015 8.648557 TTGCAGTGAGTAATATACTTTAGCTG 57.351 34.615 0.00 0.00 39.59 4.24
2513 3058 1.611977 GGTTCTTTACAAGTGTGGGCC 59.388 52.381 0.00 0.00 0.00 5.80
2521 3066 1.003580 ACAAGTGTGGGCCTATGTCTG 59.996 52.381 4.53 0.00 0.00 3.51
2528 3073 2.816087 GTGGGCCTATGTCTGCATTATG 59.184 50.000 4.53 0.00 36.58 1.90
2846 3396 8.120140 AGTAGACTCGTTTCTAAAGGTATTGT 57.880 34.615 0.00 0.00 29.70 2.71
3058 3610 4.210537 GTGGTCGAGAAAAGAAATGTTCGA 59.789 41.667 0.00 0.00 35.05 3.71
3085 3637 0.302890 GCATGTGCATACGCTCACTC 59.697 55.000 0.00 0.00 43.87 3.51
3097 3649 2.003301 CGCTCACTCTCTAAAAAGGCC 58.997 52.381 0.00 0.00 0.00 5.19
3171 3723 4.812626 ACAATGCCTTTCTTTCTGCAAAAG 59.187 37.500 12.43 12.43 37.27 2.27
3172 3724 4.677673 ATGCCTTTCTTTCTGCAAAAGT 57.322 36.364 16.01 0.00 37.27 2.66
3177 3729 6.534793 TGCCTTTCTTTCTGCAAAAGTAAAAG 59.465 34.615 16.01 16.73 0.00 2.27
3178 3730 6.756542 GCCTTTCTTTCTGCAAAAGTAAAAGA 59.243 34.615 21.19 13.34 34.94 2.52
3179 3731 7.043125 GCCTTTCTTTCTGCAAAAGTAAAAGAG 60.043 37.037 21.19 16.40 37.29 2.85
3180 3732 8.190784 CCTTTCTTTCTGCAAAAGTAAAAGAGA 58.809 33.333 21.19 11.56 37.29 3.10
3181 3733 9.741647 CTTTCTTTCTGCAAAAGTAAAAGAGAT 57.258 29.630 18.24 0.00 37.29 2.75
3187 3739 8.450578 TCTGCAAAAGTAAAAGAGATCTTTCA 57.549 30.769 8.22 0.00 44.69 2.69
3274 3826 3.642848 AGGTGCCTGATTTTGATGTTGTT 59.357 39.130 0.00 0.00 0.00 2.83
3420 3972 2.290641 AGCTGGCAAACTCTTTGTAACG 59.709 45.455 0.00 0.00 42.56 3.18
3425 3977 3.668656 GGCAAACTCTTTGTAACGATTGC 59.331 43.478 0.00 0.00 42.56 3.56
3434 3986 6.198687 TCTTTGTAACGATTGCTTCAGTTTG 58.801 36.000 0.00 0.00 0.00 2.93
3437 3989 2.977405 ACGATTGCTTCAGTTTGCTC 57.023 45.000 0.00 0.00 0.00 4.26
3449 4001 4.388485 TCAGTTTGCTCTGCATGTTCTTA 58.612 39.130 0.00 0.00 38.76 2.10
3457 4009 2.002586 CTGCATGTTCTTACCGACTGG 58.997 52.381 0.00 0.00 42.84 4.00
3519 4071 6.018098 GCATATTTGAAGGACAGAGTGATGAG 60.018 42.308 0.00 0.00 0.00 2.90
3609 4161 5.601662 TCTCTTGATGACGACAAACTTTCT 58.398 37.500 0.00 0.00 0.00 2.52
3699 4251 1.205893 CCCAAAGAGAAGTCGCTAGCT 59.794 52.381 13.93 0.00 0.00 3.32
3720 4272 2.171237 TGAATCAGCGGGATCACTTGAT 59.829 45.455 6.12 6.12 34.28 2.57
3734 4286 2.424601 CACTTGATGCTGGTGTTATGGG 59.575 50.000 0.00 0.00 0.00 4.00
3809 4361 5.119279 CAGATCGGTGTTCAACAACTAGAAG 59.881 44.000 3.56 0.00 32.52 2.85
3864 4416 7.491372 TCAGACTCCATAAACAGTTATTTAGCG 59.509 37.037 0.00 0.00 0.00 4.26
3866 4418 7.277981 AGACTCCATAAACAGTTATTTAGCGTG 59.722 37.037 0.00 0.00 0.00 5.34
3874 4426 3.855379 CAGTTATTTAGCGTGCGACAGTA 59.145 43.478 0.00 0.00 0.00 2.74
3886 4438 2.931969 TGCGACAGTAGCAAGAATGATG 59.068 45.455 5.78 0.00 42.18 3.07
3890 4442 3.614092 ACAGTAGCAAGAATGATGTGGG 58.386 45.455 0.00 0.00 0.00 4.61
3912 4464 1.249407 GTCCTCCTGTCGAAGTGTCT 58.751 55.000 0.00 0.00 0.00 3.41
3999 4551 6.808008 TTCACTGATCATCCAGAAAAAGAC 57.192 37.500 0.00 0.00 37.59 3.01
4030 4606 5.360591 CAAGGACTAAGGATCACATGGTAC 58.639 45.833 0.00 0.00 0.00 3.34
4040 4616 6.087456 AGGATCACATGGTACTTCCTGATAT 58.913 40.000 0.00 0.00 31.53 1.63
4041 4617 6.013898 AGGATCACATGGTACTTCCTGATATG 60.014 42.308 0.00 0.00 31.53 1.78
4042 4618 4.960938 TCACATGGTACTTCCTGATATGC 58.039 43.478 0.00 0.00 37.07 3.14
4137 4716 3.782523 TCTTGCCTTCACTAATCCAGGAT 59.217 43.478 0.00 0.00 0.00 3.24
4163 4742 2.933906 GCAAATCCGACGAACTGGATAA 59.066 45.455 0.00 0.00 44.16 1.75
4179 4758 7.639113 ACTGGATAAAACTGAAAACAACAGA 57.361 32.000 0.00 0.00 38.55 3.41
4275 4854 2.813908 ATCGGCGCGGTGTTCTTC 60.814 61.111 15.06 0.00 0.00 2.87
4296 4875 3.149981 CGTAGCTCATCTCAGGTATGGA 58.850 50.000 0.00 0.00 32.07 3.41
4314 4893 6.072286 GGTATGGAATCATTGTGAGCATTAGG 60.072 42.308 0.00 0.00 34.96 2.69
4342 4921 2.688507 CTGACGTGCAGGACATTACTT 58.311 47.619 14.38 0.00 41.07 2.24
4351 4930 6.341316 GTGCAGGACATTACTTGATCTTCTA 58.659 40.000 0.00 0.00 0.00 2.10
4458 5113 3.247006 GACTCAAGGGCGAAGAATGTA 57.753 47.619 0.00 0.00 0.00 2.29
4583 5240 9.908152 TGATGTAAATTCATATCTACCGTACTG 57.092 33.333 0.00 0.00 0.00 2.74
4592 5249 1.065926 TCTACCGTACTGAAGGAGCGA 60.066 52.381 0.00 0.00 0.00 4.93
4604 5261 4.086457 TGAAGGAGCGATATATACCAGCA 58.914 43.478 8.14 0.00 0.00 4.41
4610 5267 5.425577 AGCGATATATACCAGCAGTATCG 57.574 43.478 8.29 8.29 44.03 2.92
4630 5287 8.639761 AGTATCGTAATTTGGTTATAGAGCTGT 58.360 33.333 0.00 0.00 0.00 4.40
4656 5313 7.554835 TGTCAAGTGACCTAAAGTTAAATGTGT 59.445 33.333 8.91 0.00 44.15 3.72
4776 5433 3.963129 TGGAGGTGAAATATGTCCAACC 58.037 45.455 0.00 0.00 34.30 3.77
4795 5453 5.351458 CAACCTTTTGAACTAGCTTTTGCT 58.649 37.500 0.00 0.00 46.46 3.91
4884 5542 4.272504 GGTTTTGTCAATTCTGAGTCGTCA 59.727 41.667 0.00 0.00 30.14 4.35
4897 5555 0.955919 GTCGTCAAGGCCTCCTTTGG 60.956 60.000 5.23 0.00 41.69 3.28
4905 5563 3.303351 AGGCCTCCTTTGGTTCATATG 57.697 47.619 0.00 0.00 0.00 1.78
4910 5568 4.718961 CCTCCTTTGGTTCATATGGTAGG 58.281 47.826 2.13 1.85 0.00 3.18
4935 5593 8.951243 GGAATATCATAGGAATAGGAAACTTGC 58.049 37.037 0.00 0.00 43.67 4.01
4937 5595 9.512588 AATATCATAGGAATAGGAAACTTGCAG 57.487 33.333 0.00 0.00 43.67 4.41
4938 5596 5.684704 TCATAGGAATAGGAAACTTGCAGG 58.315 41.667 0.00 0.00 43.67 4.85
4943 5601 5.420104 AGGAATAGGAAACTTGCAGGAAATG 59.580 40.000 1.40 0.00 43.67 2.32
4955 5613 3.943381 TGCAGGAAATGAGATGTCATGTC 59.057 43.478 13.50 13.50 43.04 3.06
4969 5627 4.180817 TGTCATGTCGTGTTGTATGGATC 58.819 43.478 0.00 0.00 0.00 3.36
4974 5632 4.807443 TGTCGTGTTGTATGGATCGTTTA 58.193 39.130 0.00 0.00 0.00 2.01
4980 5638 6.402766 CGTGTTGTATGGATCGTTTATTTGGT 60.403 38.462 0.00 0.00 0.00 3.67
4984 5642 5.587043 TGTATGGATCGTTTATTTGGTGGTC 59.413 40.000 0.00 0.00 0.00 4.02
5034 5692 4.536765 AGCCTTTTTCGATAATGGGATGT 58.463 39.130 17.98 0.23 0.00 3.06
5048 5706 9.288576 GATAATGGGATGTCATGTATCTCAAAA 57.711 33.333 15.69 9.53 38.44 2.44
5054 5712 8.375506 GGGATGTCATGTATCTCAAAACCTATA 58.624 37.037 10.86 0.00 0.00 1.31
5079 5748 7.757242 AATAGGAATAGGAAAGAGGTTCACT 57.243 36.000 0.00 0.00 38.06 3.41
5189 5883 5.010012 AGCATTCAACTCCTACAAACCAAAG 59.990 40.000 0.00 0.00 0.00 2.77
5190 5884 5.772521 CATTCAACTCCTACAAACCAAAGG 58.227 41.667 0.00 0.00 0.00 3.11
5196 5890 4.412528 ACTCCTACAAACCAAAGGACTCTT 59.587 41.667 0.00 0.00 34.46 2.85
5197 5891 5.104067 ACTCCTACAAACCAAAGGACTCTTT 60.104 40.000 0.00 0.00 43.41 2.52
5198 5892 5.762279 TCCTACAAACCAAAGGACTCTTTT 58.238 37.500 0.00 0.00 40.92 2.27
5200 5894 4.123497 ACAAACCAAAGGACTCTTTTGC 57.877 40.909 7.89 0.00 40.92 3.68
5201 5895 3.769300 ACAAACCAAAGGACTCTTTTGCT 59.231 39.130 7.89 0.00 40.92 3.91
5202 5896 4.953579 ACAAACCAAAGGACTCTTTTGCTA 59.046 37.500 7.89 0.00 40.92 3.49
5204 5898 6.775629 ACAAACCAAAGGACTCTTTTGCTATA 59.224 34.615 7.89 0.00 40.92 1.31
5205 5899 7.286775 ACAAACCAAAGGACTCTTTTGCTATAA 59.713 33.333 7.89 0.00 40.92 0.98
5206 5900 7.833285 AACCAAAGGACTCTTTTGCTATAAA 57.167 32.000 7.89 0.00 40.92 1.40
5207 5901 7.833285 ACCAAAGGACTCTTTTGCTATAAAA 57.167 32.000 7.89 0.00 40.92 1.52
5208 5902 7.886338 ACCAAAGGACTCTTTTGCTATAAAAG 58.114 34.615 7.89 5.93 40.92 2.27
5209 5903 7.724061 ACCAAAGGACTCTTTTGCTATAAAAGA 59.276 33.333 12.59 12.59 40.92 2.52
5219 5913 9.520515 TCTTTTGCTATAAAAGAGATGTCCTTT 57.479 29.630 9.95 0.00 40.25 3.11
5220 5914 9.565213 CTTTTGCTATAAAAGAGATGTCCTTTG 57.435 33.333 6.33 0.00 39.04 2.77
5221 5915 8.862325 TTTGCTATAAAAGAGATGTCCTTTGA 57.138 30.769 0.00 0.00 34.42 2.69
5222 5916 9.466497 TTTGCTATAAAAGAGATGTCCTTTGAT 57.534 29.630 0.00 0.00 34.42 2.57
5223 5917 9.466497 TTGCTATAAAAGAGATGTCCTTTGATT 57.534 29.630 0.00 0.00 34.42 2.57
5224 5918 9.113838 TGCTATAAAAGAGATGTCCTTTGATTC 57.886 33.333 0.00 0.00 34.42 2.52
5225 5919 9.113838 GCTATAAAAGAGATGTCCTTTGATTCA 57.886 33.333 0.00 0.00 34.42 2.57
5227 5921 8.868522 ATAAAAGAGATGTCCTTTGATTCACA 57.131 30.769 0.00 0.00 34.42 3.58
5228 5922 7.771927 AAAAGAGATGTCCTTTGATTCACAT 57.228 32.000 0.00 0.00 34.42 3.21
5229 5923 6.998968 AAGAGATGTCCTTTGATTCACATC 57.001 37.500 3.21 3.21 43.70 3.06
5230 5924 6.058553 AGAGATGTCCTTTGATTCACATCA 57.941 37.500 12.21 0.00 45.13 3.07
5231 5925 6.660800 AGAGATGTCCTTTGATTCACATCAT 58.339 36.000 12.21 3.95 45.13 2.45
5232 5926 7.799081 AGAGATGTCCTTTGATTCACATCATA 58.201 34.615 12.21 0.00 45.13 2.15
5233 5927 8.438373 AGAGATGTCCTTTGATTCACATCATAT 58.562 33.333 12.21 2.09 45.13 1.78
5234 5928 8.392372 AGATGTCCTTTGATTCACATCATATG 57.608 34.615 12.21 0.00 45.13 1.78
5235 5929 8.215736 AGATGTCCTTTGATTCACATCATATGA 58.784 33.333 8.10 8.10 45.13 2.15
5236 5930 8.935614 ATGTCCTTTGATTCACATCATATGAT 57.064 30.769 12.62 12.62 39.28 2.45
5238 5932 9.498176 TGTCCTTTGATTCACATCATATGATAG 57.502 33.333 17.77 13.23 39.28 2.08
5239 5933 8.944029 GTCCTTTGATTCACATCATATGATAGG 58.056 37.037 17.77 16.17 39.28 2.57
5240 5934 8.883302 TCCTTTGATTCACATCATATGATAGGA 58.117 33.333 17.77 17.96 39.28 2.94
5241 5935 9.511272 CCTTTGATTCACATCATATGATAGGAA 57.489 33.333 23.03 23.03 39.28 3.36
5292 5986 6.054941 ACAAAATTCCTCCAAACCAAATGAC 58.945 36.000 0.00 0.00 0.00 3.06
5293 5987 4.890158 AATTCCTCCAAACCAAATGACC 57.110 40.909 0.00 0.00 0.00 4.02
5294 5988 3.611025 TTCCTCCAAACCAAATGACCT 57.389 42.857 0.00 0.00 0.00 3.85
5339 6035 3.597255 ACATCTTGAGCTGTCTGATGTG 58.403 45.455 15.76 0.00 41.55 3.21
5348 6044 2.061773 CTGTCTGATGTGTCGGTGTTC 58.938 52.381 0.00 0.00 32.33 3.18
5356 6052 4.212425 TGATGTGTCGGTGTTCATTTGTAC 59.788 41.667 0.00 0.00 0.00 2.90
5358 6054 3.558006 TGTGTCGGTGTTCATTTGTACAG 59.442 43.478 0.00 0.00 0.00 2.74
5360 6056 4.055360 TGTCGGTGTTCATTTGTACAGAG 58.945 43.478 0.00 0.00 0.00 3.35
5429 6125 8.289440 TGTATTATATGTTAAGTAGCACACGC 57.711 34.615 0.00 0.00 38.99 5.34
5435 6131 2.660189 TAAGTAGCACACGCCCTTAC 57.340 50.000 0.00 0.00 39.83 2.34
5441 6137 0.385098 GCACACGCCCTTACGAAAAC 60.385 55.000 0.00 0.00 36.70 2.43
5444 6140 0.236449 CACGCCCTTACGAAAACACC 59.764 55.000 0.00 0.00 36.70 4.16
5451 6147 5.220529 CGCCCTTACGAAAACACCTTTATAG 60.221 44.000 0.00 0.00 34.06 1.31
5452 6148 5.876460 GCCCTTACGAAAACACCTTTATAGA 59.124 40.000 0.00 0.00 0.00 1.98
5453 6149 6.372381 GCCCTTACGAAAACACCTTTATAGAA 59.628 38.462 0.00 0.00 0.00 2.10
5454 6150 7.094677 GCCCTTACGAAAACACCTTTATAGAAA 60.095 37.037 0.00 0.00 0.00 2.52
5455 6151 8.953313 CCCTTACGAAAACACCTTTATAGAAAT 58.047 33.333 0.00 0.00 0.00 2.17
5476 6172 9.997172 AGAAATTGAAAAATACCTCCTAATCCT 57.003 29.630 0.00 0.00 0.00 3.24
5487 6183 2.135664 CCTAATCCTTAGGCGTGTCG 57.864 55.000 0.00 0.00 45.72 4.35
5488 6184 1.679680 CCTAATCCTTAGGCGTGTCGA 59.320 52.381 0.00 0.00 45.72 4.20
5489 6185 2.100252 CCTAATCCTTAGGCGTGTCGAA 59.900 50.000 0.00 0.00 45.72 3.71
5490 6186 2.754946 AATCCTTAGGCGTGTCGAAA 57.245 45.000 0.00 0.00 0.00 3.46
5491 6187 2.981859 ATCCTTAGGCGTGTCGAAAT 57.018 45.000 0.00 0.00 0.00 2.17
5492 6188 2.288961 TCCTTAGGCGTGTCGAAATC 57.711 50.000 0.00 0.00 0.00 2.17
5493 6189 1.822990 TCCTTAGGCGTGTCGAAATCT 59.177 47.619 0.00 0.00 0.00 2.40
5494 6190 2.232941 TCCTTAGGCGTGTCGAAATCTT 59.767 45.455 0.00 0.00 0.00 2.40
5495 6191 2.603560 CCTTAGGCGTGTCGAAATCTTC 59.396 50.000 0.00 0.00 0.00 2.87
5496 6192 3.512680 CTTAGGCGTGTCGAAATCTTCT 58.487 45.455 0.00 0.00 0.00 2.85
5497 6193 2.457366 AGGCGTGTCGAAATCTTCTT 57.543 45.000 0.00 0.00 0.00 2.52
5498 6194 2.338500 AGGCGTGTCGAAATCTTCTTC 58.662 47.619 0.00 0.00 0.00 2.87
5499 6195 1.393883 GGCGTGTCGAAATCTTCTTCC 59.606 52.381 0.00 0.00 0.00 3.46
5500 6196 2.338500 GCGTGTCGAAATCTTCTTCCT 58.662 47.619 0.00 0.00 0.00 3.36
5501 6197 2.345942 GCGTGTCGAAATCTTCTTCCTC 59.654 50.000 0.00 0.00 0.00 3.71
5502 6198 2.924290 CGTGTCGAAATCTTCTTCCTCC 59.076 50.000 0.00 0.00 0.00 4.30
5503 6199 3.263261 GTGTCGAAATCTTCTTCCTCCC 58.737 50.000 0.00 0.00 0.00 4.30
5504 6200 2.094182 TGTCGAAATCTTCTTCCTCCCG 60.094 50.000 0.00 0.00 0.00 5.14
5505 6201 1.134788 TCGAAATCTTCTTCCTCCCGC 60.135 52.381 0.00 0.00 0.00 6.13
5506 6202 1.405526 CGAAATCTTCTTCCTCCCGCA 60.406 52.381 0.00 0.00 0.00 5.69
5507 6203 2.743183 CGAAATCTTCTTCCTCCCGCAT 60.743 50.000 0.00 0.00 0.00 4.73
5508 6204 2.629336 AATCTTCTTCCTCCCGCATC 57.371 50.000 0.00 0.00 0.00 3.91
5509 6205 0.761802 ATCTTCTTCCTCCCGCATCC 59.238 55.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.401058 CTGAAGAAACCTAATAAGATCAATGGT 57.599 33.333 0.00 0.00 0.00 3.55
3 4 8.844244 CCTGAAGAAACCTAATAAGATCAATGG 58.156 37.037 0.00 0.00 0.00 3.16
4 5 8.844244 CCCTGAAGAAACCTAATAAGATCAATG 58.156 37.037 0.00 0.00 0.00 2.82
5 6 7.503902 GCCCTGAAGAAACCTAATAAGATCAAT 59.496 37.037 0.00 0.00 0.00 2.57
6 7 6.828785 GCCCTGAAGAAACCTAATAAGATCAA 59.171 38.462 0.00 0.00 0.00 2.57
7 8 6.357367 GCCCTGAAGAAACCTAATAAGATCA 58.643 40.000 0.00 0.00 0.00 2.92
8 9 5.467063 CGCCCTGAAGAAACCTAATAAGATC 59.533 44.000 0.00 0.00 0.00 2.75
9 10 5.368989 CGCCCTGAAGAAACCTAATAAGAT 58.631 41.667 0.00 0.00 0.00 2.40
10 11 4.766375 CGCCCTGAAGAAACCTAATAAGA 58.234 43.478 0.00 0.00 0.00 2.10
11 12 3.312697 GCGCCCTGAAGAAACCTAATAAG 59.687 47.826 0.00 0.00 0.00 1.73
12 13 3.275999 GCGCCCTGAAGAAACCTAATAA 58.724 45.455 0.00 0.00 0.00 1.40
13 14 2.237643 TGCGCCCTGAAGAAACCTAATA 59.762 45.455 4.18 0.00 0.00 0.98
14 15 1.004277 TGCGCCCTGAAGAAACCTAAT 59.996 47.619 4.18 0.00 0.00 1.73
15 16 0.398696 TGCGCCCTGAAGAAACCTAA 59.601 50.000 4.18 0.00 0.00 2.69
16 17 0.618458 ATGCGCCCTGAAGAAACCTA 59.382 50.000 4.18 0.00 0.00 3.08
17 18 0.251341 AATGCGCCCTGAAGAAACCT 60.251 50.000 4.18 0.00 0.00 3.50
18 19 0.171231 GAATGCGCCCTGAAGAAACC 59.829 55.000 4.18 0.00 0.00 3.27
19 20 1.135575 CAGAATGCGCCCTGAAGAAAC 60.136 52.381 4.18 0.00 32.37 2.78
20 21 1.167851 CAGAATGCGCCCTGAAGAAA 58.832 50.000 4.18 0.00 32.37 2.52
21 22 0.036732 ACAGAATGCGCCCTGAAGAA 59.963 50.000 22.60 0.00 42.53 2.52
22 23 0.036732 AACAGAATGCGCCCTGAAGA 59.963 50.000 22.60 0.00 42.53 2.87
23 24 0.883833 AAACAGAATGCGCCCTGAAG 59.116 50.000 22.60 5.17 42.53 3.02
24 25 0.597568 CAAACAGAATGCGCCCTGAA 59.402 50.000 22.60 0.00 42.53 3.02
25 26 1.865788 GCAAACAGAATGCGCCCTGA 61.866 55.000 22.60 0.00 42.53 3.86
26 27 1.444895 GCAAACAGAATGCGCCCTG 60.445 57.895 16.61 16.61 42.53 4.45
27 28 2.964978 GCAAACAGAATGCGCCCT 59.035 55.556 4.18 0.00 42.53 5.19
32 33 1.881973 TCAGGTCAGCAAACAGAATGC 59.118 47.619 0.00 0.00 42.53 3.56
33 34 3.754850 TGATCAGGTCAGCAAACAGAATG 59.245 43.478 0.00 0.00 35.42 2.67
34 35 4.025040 TGATCAGGTCAGCAAACAGAAT 57.975 40.909 0.00 0.00 31.80 2.40
35 36 3.490439 TGATCAGGTCAGCAAACAGAA 57.510 42.857 0.00 0.00 31.80 3.02
36 37 3.603532 GATGATCAGGTCAGCAAACAGA 58.396 45.455 0.09 0.00 42.75 3.41
43 44 5.571784 TTTCATTTGATGATCAGGTCAGC 57.428 39.130 0.09 0.00 43.51 4.26
44 45 5.977725 GCATTTCATTTGATGATCAGGTCAG 59.022 40.000 0.09 0.00 40.92 3.51
45 46 5.163488 GGCATTTCATTTGATGATCAGGTCA 60.163 40.000 0.09 0.00 39.39 4.02
46 47 5.163488 TGGCATTTCATTTGATGATCAGGTC 60.163 40.000 0.09 0.00 39.39 3.85
47 48 4.712829 TGGCATTTCATTTGATGATCAGGT 59.287 37.500 0.09 0.00 39.39 4.00
48 49 5.270893 TGGCATTTCATTTGATGATCAGG 57.729 39.130 0.09 0.00 39.39 3.86
49 50 6.255670 CAGTTGGCATTTCATTTGATGATCAG 59.744 38.462 0.09 0.00 39.39 2.90
50 51 6.103330 CAGTTGGCATTTCATTTGATGATCA 58.897 36.000 0.00 0.00 39.39 2.92
51 52 5.522460 CCAGTTGGCATTTCATTTGATGATC 59.478 40.000 0.00 0.00 39.39 2.92
52 53 5.188163 TCCAGTTGGCATTTCATTTGATGAT 59.812 36.000 0.00 0.00 35.51 2.45
53 54 4.527427 TCCAGTTGGCATTTCATTTGATGA 59.473 37.500 0.00 0.00 34.38 2.92
54 55 4.823157 TCCAGTTGGCATTTCATTTGATG 58.177 39.130 0.00 0.00 34.44 3.07
55 56 5.687166 ATCCAGTTGGCATTTCATTTGAT 57.313 34.783 0.00 0.00 34.44 2.57
56 57 5.486735 AATCCAGTTGGCATTTCATTTGA 57.513 34.783 0.00 0.00 34.44 2.69
57 58 5.581874 GGTAATCCAGTTGGCATTTCATTTG 59.418 40.000 0.00 0.00 34.44 2.32
58 59 5.484998 AGGTAATCCAGTTGGCATTTCATTT 59.515 36.000 0.00 0.00 35.89 2.32
59 60 5.025453 AGGTAATCCAGTTGGCATTTCATT 58.975 37.500 0.00 0.00 35.89 2.57
60 61 4.403432 CAGGTAATCCAGTTGGCATTTCAT 59.597 41.667 0.00 0.00 35.89 2.57
61 62 3.763360 CAGGTAATCCAGTTGGCATTTCA 59.237 43.478 0.00 0.00 35.89 2.69
62 63 3.429410 GCAGGTAATCCAGTTGGCATTTC 60.429 47.826 0.00 0.00 35.89 2.17
63 64 2.497273 GCAGGTAATCCAGTTGGCATTT 59.503 45.455 0.00 0.00 35.89 2.32
64 65 2.102578 GCAGGTAATCCAGTTGGCATT 58.897 47.619 0.00 0.00 35.89 3.56
65 66 1.686115 GGCAGGTAATCCAGTTGGCAT 60.686 52.381 0.00 0.00 33.99 4.40
66 67 0.323360 GGCAGGTAATCCAGTTGGCA 60.323 55.000 0.00 0.00 33.99 4.92
67 68 1.037579 GGGCAGGTAATCCAGTTGGC 61.038 60.000 0.00 0.00 35.89 4.52
68 69 0.625849 AGGGCAGGTAATCCAGTTGG 59.374 55.000 0.00 0.00 35.89 3.77
69 70 1.281867 TCAGGGCAGGTAATCCAGTTG 59.718 52.381 0.00 0.00 35.89 3.16
70 71 1.668826 TCAGGGCAGGTAATCCAGTT 58.331 50.000 0.00 0.00 35.89 3.16
71 72 1.668826 TTCAGGGCAGGTAATCCAGT 58.331 50.000 0.00 0.00 35.89 4.00
72 73 2.755103 GTTTTCAGGGCAGGTAATCCAG 59.245 50.000 0.00 0.00 35.89 3.86
73 74 2.378547 AGTTTTCAGGGCAGGTAATCCA 59.621 45.455 0.00 0.00 35.89 3.41
74 75 2.755103 CAGTTTTCAGGGCAGGTAATCC 59.245 50.000 0.00 0.00 0.00 3.01
75 76 2.755103 CCAGTTTTCAGGGCAGGTAATC 59.245 50.000 0.00 0.00 0.00 1.75
76 77 2.378547 TCCAGTTTTCAGGGCAGGTAAT 59.621 45.455 0.00 0.00 0.00 1.89
77 78 1.777878 TCCAGTTTTCAGGGCAGGTAA 59.222 47.619 0.00 0.00 0.00 2.85
78 79 1.440618 TCCAGTTTTCAGGGCAGGTA 58.559 50.000 0.00 0.00 0.00 3.08
79 80 0.555769 TTCCAGTTTTCAGGGCAGGT 59.444 50.000 0.00 0.00 0.00 4.00
80 81 1.547372 CATTCCAGTTTTCAGGGCAGG 59.453 52.381 0.00 0.00 0.00 4.85
81 82 2.490903 CTCATTCCAGTTTTCAGGGCAG 59.509 50.000 0.00 0.00 0.00 4.85
82 83 2.108075 TCTCATTCCAGTTTTCAGGGCA 59.892 45.455 0.00 0.00 0.00 5.36
83 84 2.795329 TCTCATTCCAGTTTTCAGGGC 58.205 47.619 0.00 0.00 0.00 5.19
84 85 5.990120 AAATCTCATTCCAGTTTTCAGGG 57.010 39.130 0.00 0.00 0.00 4.45
85 86 7.177392 ACCTTAAATCTCATTCCAGTTTTCAGG 59.823 37.037 0.00 0.00 34.91 3.86
86 87 8.115490 ACCTTAAATCTCATTCCAGTTTTCAG 57.885 34.615 0.00 0.00 0.00 3.02
87 88 7.176690 GGACCTTAAATCTCATTCCAGTTTTCA 59.823 37.037 0.00 0.00 0.00 2.69
88 89 7.363007 GGGACCTTAAATCTCATTCCAGTTTTC 60.363 40.741 0.00 0.00 0.00 2.29
89 90 6.437477 GGGACCTTAAATCTCATTCCAGTTTT 59.563 38.462 0.00 0.00 0.00 2.43
90 91 5.952347 GGGACCTTAAATCTCATTCCAGTTT 59.048 40.000 0.00 0.00 0.00 2.66
91 92 5.510430 GGGACCTTAAATCTCATTCCAGTT 58.490 41.667 0.00 0.00 0.00 3.16
92 93 4.384208 CGGGACCTTAAATCTCATTCCAGT 60.384 45.833 0.00 0.00 0.00 4.00
93 94 4.130118 CGGGACCTTAAATCTCATTCCAG 58.870 47.826 0.00 0.00 0.00 3.86
94 95 3.521937 ACGGGACCTTAAATCTCATTCCA 59.478 43.478 0.00 0.00 0.00 3.53
95 96 3.877508 CACGGGACCTTAAATCTCATTCC 59.122 47.826 0.00 0.00 0.00 3.01
96 97 4.332819 CACACGGGACCTTAAATCTCATTC 59.667 45.833 0.00 0.00 0.00 2.67
97 98 4.019681 TCACACGGGACCTTAAATCTCATT 60.020 41.667 0.00 0.00 0.00 2.57
98 99 3.517901 TCACACGGGACCTTAAATCTCAT 59.482 43.478 0.00 0.00 0.00 2.90
99 100 2.901192 TCACACGGGACCTTAAATCTCA 59.099 45.455 0.00 0.00 0.00 3.27
100 101 3.604875 TCACACGGGACCTTAAATCTC 57.395 47.619 0.00 0.00 0.00 2.75
101 102 4.569719 AATCACACGGGACCTTAAATCT 57.430 40.909 0.00 0.00 0.00 2.40
102 103 5.878669 AGTAAATCACACGGGACCTTAAATC 59.121 40.000 0.00 0.00 0.00 2.17
103 104 5.812286 AGTAAATCACACGGGACCTTAAAT 58.188 37.500 0.00 0.00 0.00 1.40
104 105 5.231702 AGTAAATCACACGGGACCTTAAA 57.768 39.130 0.00 0.00 0.00 1.52
105 106 4.895668 AGTAAATCACACGGGACCTTAA 57.104 40.909 0.00 0.00 0.00 1.85
106 107 5.657745 TCATAGTAAATCACACGGGACCTTA 59.342 40.000 0.00 0.00 0.00 2.69
107 108 4.468510 TCATAGTAAATCACACGGGACCTT 59.531 41.667 0.00 0.00 0.00 3.50
108 109 4.028131 TCATAGTAAATCACACGGGACCT 58.972 43.478 0.00 0.00 0.00 3.85
109 110 4.395959 TCATAGTAAATCACACGGGACC 57.604 45.455 0.00 0.00 0.00 4.46
110 111 5.597806 TGATCATAGTAAATCACACGGGAC 58.402 41.667 0.00 0.00 0.00 4.46
111 112 5.862678 TGATCATAGTAAATCACACGGGA 57.137 39.130 0.00 0.00 0.00 5.14
112 113 6.049149 AGTTGATCATAGTAAATCACACGGG 58.951 40.000 0.00 0.00 31.83 5.28
113 114 7.401860 CAAGTTGATCATAGTAAATCACACGG 58.598 38.462 0.00 0.00 31.83 4.94
114 115 6.901887 GCAAGTTGATCATAGTAAATCACACG 59.098 38.462 7.16 0.00 31.83 4.49
115 116 7.751732 TGCAAGTTGATCATAGTAAATCACAC 58.248 34.615 7.16 0.00 31.83 3.82
116 117 7.823799 TCTGCAAGTTGATCATAGTAAATCACA 59.176 33.333 7.16 0.00 31.83 3.58
117 118 8.201554 TCTGCAAGTTGATCATAGTAAATCAC 57.798 34.615 7.16 0.00 31.83 3.06
118 119 8.969260 ATCTGCAAGTTGATCATAGTAAATCA 57.031 30.769 7.16 0.00 33.76 2.57
123 124 9.330063 CCTTAAATCTGCAAGTTGATCATAGTA 57.670 33.333 7.16 0.00 33.76 1.82
124 125 7.831193 ACCTTAAATCTGCAAGTTGATCATAGT 59.169 33.333 7.16 0.00 33.76 2.12
125 126 8.218338 ACCTTAAATCTGCAAGTTGATCATAG 57.782 34.615 7.16 0.00 33.76 2.23
126 127 7.283127 GGACCTTAAATCTGCAAGTTGATCATA 59.717 37.037 7.16 0.00 33.76 2.15
127 128 6.096001 GGACCTTAAATCTGCAAGTTGATCAT 59.904 38.462 7.16 0.00 33.76 2.45
128 129 5.415701 GGACCTTAAATCTGCAAGTTGATCA 59.584 40.000 7.16 0.00 33.76 2.92
129 130 5.163612 GGGACCTTAAATCTGCAAGTTGATC 60.164 44.000 7.16 0.00 33.76 2.92
130 131 4.706962 GGGACCTTAAATCTGCAAGTTGAT 59.293 41.667 7.16 0.00 33.76 2.57
131 132 4.079253 GGGACCTTAAATCTGCAAGTTGA 58.921 43.478 7.16 0.00 33.76 3.18
132 133 3.119849 CGGGACCTTAAATCTGCAAGTTG 60.120 47.826 0.00 0.00 33.76 3.16
133 134 3.081804 CGGGACCTTAAATCTGCAAGTT 58.918 45.455 0.00 0.00 33.76 2.66
134 135 2.039879 ACGGGACCTTAAATCTGCAAGT 59.960 45.455 0.00 0.00 33.76 3.16
135 136 2.420022 CACGGGACCTTAAATCTGCAAG 59.580 50.000 0.00 0.00 0.00 4.01
136 137 2.224670 ACACGGGACCTTAAATCTGCAA 60.225 45.455 0.00 0.00 0.00 4.08
137 138 1.349688 ACACGGGACCTTAAATCTGCA 59.650 47.619 0.00 0.00 0.00 4.41
138 139 2.007608 GACACGGGACCTTAAATCTGC 58.992 52.381 0.00 0.00 0.00 4.26
139 140 3.328382 TGACACGGGACCTTAAATCTG 57.672 47.619 0.00 0.00 0.00 2.90
140 141 4.569719 ATTGACACGGGACCTTAAATCT 57.430 40.909 0.00 0.00 0.00 2.40
141 142 4.095932 GGAATTGACACGGGACCTTAAATC 59.904 45.833 0.00 0.00 0.00 2.17
142 143 4.014406 GGAATTGACACGGGACCTTAAAT 58.986 43.478 0.00 0.00 0.00 1.40
143 144 3.073356 AGGAATTGACACGGGACCTTAAA 59.927 43.478 0.00 0.00 0.00 1.52
144 145 2.640826 AGGAATTGACACGGGACCTTAA 59.359 45.455 0.00 0.00 0.00 1.85
145 146 2.262637 AGGAATTGACACGGGACCTTA 58.737 47.619 0.00 0.00 0.00 2.69
146 147 1.064825 AGGAATTGACACGGGACCTT 58.935 50.000 0.00 0.00 0.00 3.50
147 148 1.003233 GAAGGAATTGACACGGGACCT 59.997 52.381 0.00 0.00 0.00 3.85
148 149 1.450025 GAAGGAATTGACACGGGACC 58.550 55.000 0.00 0.00 0.00 4.46
149 150 1.450025 GGAAGGAATTGACACGGGAC 58.550 55.000 0.00 0.00 0.00 4.46
150 151 0.036765 CGGAAGGAATTGACACGGGA 60.037 55.000 0.00 0.00 0.00 5.14
151 152 0.321298 ACGGAAGGAATTGACACGGG 60.321 55.000 0.00 0.00 0.00 5.28
152 153 2.373540 TACGGAAGGAATTGACACGG 57.626 50.000 0.00 0.00 0.00 4.94
153 154 3.259064 ACATACGGAAGGAATTGACACG 58.741 45.455 0.00 0.00 0.00 4.49
154 155 5.657474 TCTACATACGGAAGGAATTGACAC 58.343 41.667 0.00 0.00 0.00 3.67
155 156 5.421056 ACTCTACATACGGAAGGAATTGACA 59.579 40.000 0.00 0.00 0.00 3.58
156 157 5.903810 ACTCTACATACGGAAGGAATTGAC 58.096 41.667 0.00 0.00 0.00 3.18
157 158 7.658261 CATACTCTACATACGGAAGGAATTGA 58.342 38.462 0.00 0.00 0.00 2.57
158 159 6.366332 GCATACTCTACATACGGAAGGAATTG 59.634 42.308 0.00 0.00 0.00 2.32
159 160 6.267928 AGCATACTCTACATACGGAAGGAATT 59.732 38.462 0.00 0.00 0.00 2.17
160 161 5.775701 AGCATACTCTACATACGGAAGGAAT 59.224 40.000 0.00 0.00 0.00 3.01
161 162 5.138276 AGCATACTCTACATACGGAAGGAA 58.862 41.667 0.00 0.00 0.00 3.36
180 181 3.838244 TCAGCGAATAGGGTAAAGCAT 57.162 42.857 0.00 0.00 0.00 3.79
192 193 6.161855 TCTACTCCACAATATTCAGCGAAT 57.838 37.500 8.46 8.46 36.20 3.34
197 198 8.954950 ATCAAACTCTACTCCACAATATTCAG 57.045 34.615 0.00 0.00 0.00 3.02
214 218 6.579491 GCAATTAGCATTCCAATCAAACTC 57.421 37.500 0.00 0.00 44.79 3.01
268 272 2.595386 CCCGTGTACCGTGTTACTAAC 58.405 52.381 0.00 0.00 33.66 2.34
269 273 1.543802 CCCCGTGTACCGTGTTACTAA 59.456 52.381 0.00 0.00 33.66 2.24
270 274 1.173043 CCCCGTGTACCGTGTTACTA 58.827 55.000 0.00 0.00 33.66 1.82
271 275 0.539438 TCCCCGTGTACCGTGTTACT 60.539 55.000 0.00 0.00 33.66 2.24
273 277 0.825425 TGTCCCCGTGTACCGTGTTA 60.825 55.000 0.00 0.00 33.66 2.41
276 280 2.048877 GTGTCCCCGTGTACCGTG 60.049 66.667 0.00 0.00 33.66 4.94
278 282 0.320946 ATTTGTGTCCCCGTGTACCG 60.321 55.000 0.00 0.00 0.00 4.02
279 283 2.027837 AGTATTTGTGTCCCCGTGTACC 60.028 50.000 0.00 0.00 0.00 3.34
280 284 3.323751 AGTATTTGTGTCCCCGTGTAC 57.676 47.619 0.00 0.00 0.00 2.90
281 285 5.395546 GGATTAGTATTTGTGTCCCCGTGTA 60.396 44.000 0.00 0.00 0.00 2.90
282 286 4.510571 GATTAGTATTTGTGTCCCCGTGT 58.489 43.478 0.00 0.00 0.00 4.49
283 287 3.875134 GGATTAGTATTTGTGTCCCCGTG 59.125 47.826 0.00 0.00 0.00 4.94
284 288 3.118149 GGGATTAGTATTTGTGTCCCCGT 60.118 47.826 0.00 0.00 39.49 5.28
285 289 3.118186 TGGGATTAGTATTTGTGTCCCCG 60.118 47.826 5.84 0.00 43.72 5.73
286 290 4.513406 TGGGATTAGTATTTGTGTCCCC 57.487 45.455 5.84 0.00 43.72 4.81
287 291 6.126409 TCATTGGGATTAGTATTTGTGTCCC 58.874 40.000 1.32 1.32 44.43 4.46
288 292 7.201821 CCTTCATTGGGATTAGTATTTGTGTCC 60.202 40.741 0.00 0.00 0.00 4.02
289 293 7.682021 GCCTTCATTGGGATTAGTATTTGTGTC 60.682 40.741 0.00 0.00 0.00 3.67
290 294 6.096846 GCCTTCATTGGGATTAGTATTTGTGT 59.903 38.462 0.00 0.00 0.00 3.72
291 295 6.322201 AGCCTTCATTGGGATTAGTATTTGTG 59.678 38.462 0.00 0.00 0.00 3.33
292 296 6.435164 AGCCTTCATTGGGATTAGTATTTGT 58.565 36.000 0.00 0.00 0.00 2.83
293 297 6.774656 AGAGCCTTCATTGGGATTAGTATTTG 59.225 38.462 0.00 0.00 0.00 2.32
318 325 2.306805 AGCTGAAATCCACTGGTGATGA 59.693 45.455 1.93 0.00 0.00 2.92
320 327 2.040813 ACAGCTGAAATCCACTGGTGAT 59.959 45.455 23.35 0.00 37.83 3.06
321 328 1.421268 ACAGCTGAAATCCACTGGTGA 59.579 47.619 23.35 0.00 37.83 4.02
327 334 0.804989 CGGGAACAGCTGAAATCCAC 59.195 55.000 27.12 19.25 33.48 4.02
343 358 4.849329 GCCTCGAGTACGTGCGGG 62.849 72.222 12.31 0.00 40.69 6.13
385 400 1.250328 TCCATCTCAACCACGTACGT 58.750 50.000 16.72 16.72 0.00 3.57
396 411 2.569059 GCTGCTTGCTTATCCATCTCA 58.431 47.619 0.00 0.00 38.95 3.27
412 427 1.521616 CTCTGGGAGAAGAGGCTGC 59.478 63.158 0.00 0.00 40.11 5.25
458 473 4.098654 GCAGACTGGTAGATGACACATACT 59.901 45.833 4.26 0.00 0.00 2.12
461 476 2.833943 TGCAGACTGGTAGATGACACAT 59.166 45.455 4.26 0.00 0.00 3.21
462 477 2.029020 GTGCAGACTGGTAGATGACACA 60.029 50.000 4.26 0.00 0.00 3.72
464 479 2.493675 GAGTGCAGACTGGTAGATGACA 59.506 50.000 4.26 0.00 30.16 3.58
465 480 2.757868 AGAGTGCAGACTGGTAGATGAC 59.242 50.000 4.26 0.00 30.16 3.06
466 481 2.757314 CAGAGTGCAGACTGGTAGATGA 59.243 50.000 4.26 0.00 30.16 2.92
468 483 2.106566 CCAGAGTGCAGACTGGTAGAT 58.893 52.381 23.27 0.00 45.82 1.98
527 582 1.528309 AGGCGGGACAAAACCAGTG 60.528 57.895 0.00 0.00 0.00 3.66
548 647 1.513586 GAGACGGCGACTTACACGG 60.514 63.158 16.62 0.00 0.00 4.94
560 659 3.878519 GCTCGACGGAGGAGACGG 61.879 72.222 0.00 0.00 40.80 4.79
561 660 3.878519 GGCTCGACGGAGGAGACG 61.879 72.222 0.00 0.00 40.80 4.18
562 661 2.438795 AGGCTCGACGGAGGAGAC 60.439 66.667 0.00 1.07 40.80 3.36
563 662 2.438614 CAGGCTCGACGGAGGAGA 60.439 66.667 0.00 0.00 40.80 3.71
567 666 4.504916 CTGGCAGGCTCGACGGAG 62.505 72.222 6.61 0.00 43.46 4.63
643 750 1.182667 GGAGGTTTTGATTTCCGGGG 58.817 55.000 0.00 0.00 0.00 5.73
671 780 4.605967 GTGTGTGCAACGTGCCGG 62.606 66.667 0.00 0.00 44.23 6.13
772 898 2.108952 AGCCTTTTCTGTTGACATCCCT 59.891 45.455 0.00 0.00 0.00 4.20
778 904 1.268079 GCCAGAGCCTTTTCTGTTGAC 59.732 52.381 2.73 0.00 42.41 3.18
779 905 1.143684 AGCCAGAGCCTTTTCTGTTGA 59.856 47.619 2.73 0.00 42.41 3.18
783 909 3.379688 GGAATAAGCCAGAGCCTTTTCTG 59.620 47.826 0.00 0.00 43.35 3.02
793 919 2.203015 GCGCCGGAATAAGCCAGA 60.203 61.111 5.05 0.00 0.00 3.86
794 920 2.513666 TGCGCCGGAATAAGCCAG 60.514 61.111 5.05 0.00 0.00 4.85
795 921 2.513666 CTGCGCCGGAATAAGCCA 60.514 61.111 5.05 0.00 0.00 4.75
796 922 3.279875 CCTGCGCCGGAATAAGCC 61.280 66.667 13.28 0.00 0.00 4.35
849 1030 3.704231 GATGATGCAGGGCGGGTGT 62.704 63.158 0.00 0.00 0.00 4.16
859 1040 1.363885 GAGTGCACGCTGATGATGCA 61.364 55.000 13.84 0.00 46.73 3.96
860 1041 1.351012 GAGTGCACGCTGATGATGC 59.649 57.895 13.84 0.00 39.88 3.91
862 1043 0.742281 GTGGAGTGCACGCTGATGAT 60.742 55.000 20.23 0.00 0.00 2.45
863 1044 1.374631 GTGGAGTGCACGCTGATGA 60.375 57.895 20.23 0.00 0.00 2.92
868 1049 4.626081 GGTGGTGGAGTGCACGCT 62.626 66.667 20.23 0.00 0.00 5.07
883 1064 0.172803 CTACTAGTTGCTTCGGCGGT 59.827 55.000 7.21 0.00 45.37 5.68
888 1069 1.281899 GGCTGCTACTAGTTGCTTCG 58.718 55.000 25.89 16.49 32.65 3.79
896 1077 1.736586 CGGGTCTGGCTGCTACTAG 59.263 63.158 0.00 0.00 0.00 2.57
897 1078 1.756950 CCGGGTCTGGCTGCTACTA 60.757 63.158 0.00 0.00 0.00 1.82
899 1080 4.162690 CCCGGGTCTGGCTGCTAC 62.163 72.222 14.18 0.00 0.00 3.58
1142 1389 0.238817 GCGGCGACTACTCCTAGATG 59.761 60.000 12.98 0.00 0.00 2.90
1143 1390 0.890090 GGCGGCGACTACTCCTAGAT 60.890 60.000 12.98 0.00 0.00 1.98
1144 1391 1.525535 GGCGGCGACTACTCCTAGA 60.526 63.158 12.98 0.00 0.00 2.43
1145 1392 2.553727 GGGCGGCGACTACTCCTAG 61.554 68.421 14.66 0.00 0.00 3.02
1146 1393 2.517875 GGGCGGCGACTACTCCTA 60.518 66.667 14.66 0.00 0.00 2.94
1147 1394 4.753662 TGGGCGGCGACTACTCCT 62.754 66.667 14.66 0.00 0.00 3.69
1148 1395 3.090219 ATTGGGCGGCGACTACTCC 62.090 63.158 14.66 0.59 0.00 3.85
1149 1396 1.883084 CATTGGGCGGCGACTACTC 60.883 63.158 14.66 0.00 0.00 2.59
1150 1397 2.186903 CATTGGGCGGCGACTACT 59.813 61.111 14.66 0.00 0.00 2.57
1151 1398 2.862674 TTCCATTGGGCGGCGACTAC 62.863 60.000 14.66 0.00 0.00 2.73
1152 1399 2.661066 TTCCATTGGGCGGCGACTA 61.661 57.895 14.66 2.22 0.00 2.59
1153 1400 4.028490 TTCCATTGGGCGGCGACT 62.028 61.111 14.66 0.00 0.00 4.18
1154 1401 3.810896 GTTCCATTGGGCGGCGAC 61.811 66.667 12.98 8.16 0.00 5.19
1380 1671 3.440522 CCGTCGAATCAGAGCATATCCTA 59.559 47.826 0.00 0.00 0.00 2.94
1381 1672 2.230025 CCGTCGAATCAGAGCATATCCT 59.770 50.000 0.00 0.00 0.00 3.24
1383 1674 1.989165 GCCGTCGAATCAGAGCATATC 59.011 52.381 0.00 0.00 0.00 1.63
1384 1675 1.667177 CGCCGTCGAATCAGAGCATAT 60.667 52.381 0.00 0.00 38.10 1.78
1385 1676 0.317854 CGCCGTCGAATCAGAGCATA 60.318 55.000 0.00 0.00 38.10 3.14
1408 1699 4.191485 CGAACATGCGCGTCGTCC 62.191 66.667 8.43 0.00 0.00 4.79
1414 1705 2.498761 AAACAGCTCGAACATGCGCG 62.499 55.000 0.00 0.00 0.00 6.86
1445 1736 2.279937 GATCGACACTTCGGCGTTGC 62.280 60.000 6.85 0.00 45.90 4.17
1466 1757 0.994995 CTCTTTCGAGTGCACGGATG 59.005 55.000 12.01 9.13 32.47 3.51
1487 1778 1.022982 CGCATCCATCCATCCATCCG 61.023 60.000 0.00 0.00 0.00 4.18
1512 1806 4.326766 CCGTTGCAGTGGTTGGCG 62.327 66.667 0.00 0.00 0.00 5.69
1527 1821 0.171903 ACGGTAAATCAGACGTCCCG 59.828 55.000 20.72 20.72 39.75 5.14
1536 1830 8.500773 GTCTTGACAAATTTCTACGGTAAATCA 58.499 33.333 0.00 0.00 0.00 2.57
1544 1838 5.969741 TCAACGTCTTGACAAATTTCTACG 58.030 37.500 0.00 0.00 31.00 3.51
1545 1839 7.321271 CACATCAACGTCTTGACAAATTTCTAC 59.679 37.037 0.00 0.00 39.28 2.59
1600 1894 2.221055 CACAGCTCAACCTCGTGTTTAC 59.779 50.000 0.00 0.00 34.00 2.01
1652 1951 7.490962 TTTATCCGATGTTGACACATAATCC 57.509 36.000 0.00 0.00 44.22 3.01
1653 1952 8.612619 AGTTTTATCCGATGTTGACACATAATC 58.387 33.333 0.00 0.00 44.22 1.75
1669 1968 5.408356 AGCAGTACAGTACAGTTTTATCCG 58.592 41.667 13.37 0.00 0.00 4.18
1690 1989 3.252974 TGGCAGAAGAAGTTAGCTAGC 57.747 47.619 6.62 6.62 0.00 3.42
1691 1990 5.016051 TCATGGCAGAAGAAGTTAGCTAG 57.984 43.478 0.00 0.00 0.00 3.42
1692 1991 5.420725 TTCATGGCAGAAGAAGTTAGCTA 57.579 39.130 0.00 0.00 0.00 3.32
1709 2008 5.038683 AGCGCAATACAATTGACATTCATG 58.961 37.500 13.59 2.20 0.00 3.07
1722 2021 6.508777 TCTGTTGTATATACAGCGCAATACA 58.491 36.000 20.55 15.95 42.12 2.29
1887 2283 5.541484 TCCCTCCGTTCCTAAATATAAGTCC 59.459 44.000 0.00 0.00 0.00 3.85
1904 2300 5.106237 GCACTACAATATACTACTCCCTCCG 60.106 48.000 0.00 0.00 0.00 4.63
1908 2304 6.651975 ACTGCACTACAATATACTACTCCC 57.348 41.667 0.00 0.00 0.00 4.30
1920 2316 5.368145 ACAGAATGAAGAACTGCACTACAA 58.632 37.500 0.00 0.00 39.69 2.41
2061 2465 6.649557 GTGCAGAGGTATATGTATAACCAACC 59.350 42.308 0.00 0.00 0.00 3.77
2099 2503 4.363138 TGATGTACAGAAGCAAGATAGCG 58.637 43.478 0.33 0.00 40.15 4.26
2416 2961 7.093322 AGATCTTTTAGTTCCACATTGCATC 57.907 36.000 0.00 0.00 0.00 3.91
2420 2965 7.452880 TCCAAGATCTTTTAGTTCCACATTG 57.547 36.000 4.86 0.00 0.00 2.82
2427 2972 7.025963 CACTGCAATCCAAGATCTTTTAGTTC 58.974 38.462 4.86 0.00 0.00 3.01
2434 2979 4.298103 ACTCACTGCAATCCAAGATCTT 57.702 40.909 0.88 0.88 0.00 2.40
2444 2989 9.265901 CAGCTAAAGTATATTACTCACTGCAAT 57.734 33.333 0.00 0.00 38.26 3.56
2513 3058 4.011966 TGGCTCCATAATGCAGACATAG 57.988 45.455 0.00 0.00 34.62 2.23
2521 3066 2.754552 TGAACAGTTGGCTCCATAATGC 59.245 45.455 0.00 0.00 0.00 3.56
2528 3073 4.590850 ATTTTTCTGAACAGTTGGCTCC 57.409 40.909 0.00 0.00 0.00 4.70
2667 3213 4.009675 TCTGTCGGCATAAAAAGCAGAAT 58.990 39.130 0.00 0.00 37.90 2.40
2866 3416 9.840427 ATAAAGATAACGACTTGACAAAATTGG 57.160 29.630 0.00 0.00 0.00 3.16
2873 3423 9.268268 ACTGAAAATAAAGATAACGACTTGACA 57.732 29.630 0.00 0.00 0.00 3.58
3085 3637 2.710096 TCATCCCGGCCTTTTTAGAG 57.290 50.000 0.00 0.00 0.00 2.43
3097 3649 0.583438 CGTTTAGCTGCATCATCCCG 59.417 55.000 1.02 0.00 0.00 5.14
3135 3687 5.806654 AAGGCATTGTTGAAATAGGTTGT 57.193 34.783 0.00 0.00 0.00 3.32
3177 3729 9.956720 TCAAAGAAAATTTGACTGAAAGATCTC 57.043 29.630 0.00 0.00 37.43 2.75
3274 3826 1.409521 GGCATGGCTATTGTGTGGGTA 60.410 52.381 12.86 0.00 0.00 3.69
3420 3972 2.030540 TGCAGAGCAAACTGAAGCAATC 60.031 45.455 9.20 0.00 39.94 2.67
3425 3977 3.252701 AGAACATGCAGAGCAAACTGAAG 59.747 43.478 9.20 1.99 43.62 3.02
3434 3986 1.661112 GTCGGTAAGAACATGCAGAGC 59.339 52.381 0.00 0.00 0.00 4.09
3437 3989 2.002586 CCAGTCGGTAAGAACATGCAG 58.997 52.381 0.00 0.00 0.00 4.41
3467 4019 6.502138 TGTGGAAAATAGGGATTGAAAGGAT 58.498 36.000 0.00 0.00 0.00 3.24
3519 4071 1.663643 TCATAATGTCGGTCGCTTTGC 59.336 47.619 0.00 0.00 0.00 3.68
3609 4161 0.746063 CACCCAACTGCAAAAGCTCA 59.254 50.000 0.00 0.00 0.00 4.26
3669 4221 4.410099 ACTTCTCTTTGGGCATTTCATGA 58.590 39.130 0.00 0.00 0.00 3.07
3682 4234 3.944055 TTCAGCTAGCGACTTCTCTTT 57.056 42.857 9.55 0.00 0.00 2.52
3699 4251 1.554617 TCAAGTGATCCCGCTGATTCA 59.445 47.619 0.00 0.00 32.41 2.57
3720 4272 0.608856 CAGCACCCATAACACCAGCA 60.609 55.000 0.00 0.00 0.00 4.41
3734 4286 5.232414 GGAGTTGAATTCGTAGTATCAGCAC 59.768 44.000 0.04 0.00 0.00 4.40
3864 4416 2.337583 TCATTCTTGCTACTGTCGCAC 58.662 47.619 6.49 0.00 37.07 5.34
3866 4418 2.932614 ACATCATTCTTGCTACTGTCGC 59.067 45.455 0.00 0.00 0.00 5.19
3874 4426 1.033746 CCGCCCACATCATTCTTGCT 61.034 55.000 0.00 0.00 0.00 3.91
3886 4438 4.083862 GACAGGAGGACCGCCCAC 62.084 72.222 11.17 0.00 41.83 4.61
3890 4442 2.182030 CTTCGACAGGAGGACCGC 59.818 66.667 0.00 0.00 41.83 5.68
3904 4456 6.183360 CCATCATGAATCCTTTCAGACACTTC 60.183 42.308 0.00 0.00 44.75 3.01
3912 4464 3.940852 CGTGTCCATCATGAATCCTTTCA 59.059 43.478 0.00 0.00 45.57 2.69
3999 4551 1.337071 TCCTTAGTCCTTGCGCTATCG 59.663 52.381 9.73 0.00 39.07 2.92
4084 4663 8.372459 TGTTATTGTTCTACTGTGGTAGTTCAT 58.628 33.333 3.59 0.00 44.13 2.57
4087 4666 9.569122 AAATGTTATTGTTCTACTGTGGTAGTT 57.431 29.630 3.59 0.00 44.13 2.24
4137 4716 0.237235 GTTCGTCGGATTTGCAAGCA 59.763 50.000 0.00 0.00 0.00 3.91
4163 4742 6.397272 TGAGCATTTCTGTTGTTTTCAGTTT 58.603 32.000 0.00 0.00 34.86 2.66
4179 4758 2.677228 CCGGTCCCCTGAGCATTT 59.323 61.111 0.00 0.00 38.96 2.32
4266 4845 3.119459 TGAGATGAGCTACGAAGAACACC 60.119 47.826 0.00 0.00 0.00 4.16
4275 4854 3.149981 TCCATACCTGAGATGAGCTACG 58.850 50.000 0.00 0.00 0.00 3.51
4296 4875 4.275810 ACTGCCTAATGCTCACAATGATT 58.724 39.130 0.00 0.00 42.00 2.57
4314 4893 2.153913 CTGCACGTCAGGTTACTGC 58.846 57.895 7.01 0.00 44.54 4.40
4342 4921 7.224753 GCATTGATAGACGGTTTTAGAAGATCA 59.775 37.037 0.00 0.00 0.00 2.92
4351 4930 3.081061 TGCAGCATTGATAGACGGTTTT 58.919 40.909 0.00 0.00 0.00 2.43
4458 5113 1.137479 TCGGTTGTCTTTCCGTTGTCT 59.863 47.619 3.64 0.00 45.88 3.41
4577 5234 5.353400 TGGTATATATCGCTCCTTCAGTACG 59.647 44.000 0.00 0.00 0.00 3.67
4583 5240 4.158764 ACTGCTGGTATATATCGCTCCTTC 59.841 45.833 9.96 0.00 0.00 3.46
4585 5242 3.702792 ACTGCTGGTATATATCGCTCCT 58.297 45.455 9.96 0.00 0.00 3.69
4592 5249 9.817809 CCAAATTACGATACTGCTGGTATATAT 57.182 33.333 0.00 0.00 40.82 0.86
4604 5261 8.639761 ACAGCTCTATAACCAAATTACGATACT 58.360 33.333 0.00 0.00 0.00 2.12
4610 5267 7.843490 TGACACAGCTCTATAACCAAATTAC 57.157 36.000 0.00 0.00 0.00 1.89
4630 5287 7.554835 ACACATTTAACTTTAGGTCACTTGACA 59.445 33.333 11.40 0.00 46.47 3.58
4776 5433 8.634475 AAAGTAAGCAAAAGCTAGTTCAAAAG 57.366 30.769 0.00 0.00 0.00 2.27
4824 5482 7.223777 GCTGTGAAAAATAGCCACTAAAACAAA 59.776 33.333 0.00 0.00 37.05 2.83
4830 5488 5.312895 TCTGCTGTGAAAAATAGCCACTAA 58.687 37.500 0.00 0.00 42.11 2.24
4910 5568 9.507329 TGCAAGTTTCCTATTCCTATGATATTC 57.493 33.333 0.00 0.00 0.00 1.75
4935 5593 4.033702 CACGACATGACATCTCATTTCCTG 59.966 45.833 0.00 0.00 34.65 3.86
4937 5595 3.935203 ACACGACATGACATCTCATTTCC 59.065 43.478 0.00 0.00 34.65 3.13
4938 5596 5.106948 ACAACACGACATGACATCTCATTTC 60.107 40.000 0.00 0.00 34.65 2.17
4943 5601 4.268644 CCATACAACACGACATGACATCTC 59.731 45.833 0.00 0.00 0.00 2.75
4955 5613 5.963004 CCAAATAAACGATCCATACAACACG 59.037 40.000 0.00 0.00 0.00 4.49
4969 5627 2.031508 AGCAACGACCACCAAATAAACG 60.032 45.455 0.00 0.00 0.00 3.60
4974 5632 7.817418 ATATATAAAGCAACGACCACCAAAT 57.183 32.000 0.00 0.00 0.00 2.32
5023 5681 9.071276 GTTTTGAGATACATGACATCCCATTAT 57.929 33.333 0.00 0.00 0.00 1.28
5029 5687 9.778741 TTATAGGTTTTGAGATACATGACATCC 57.221 33.333 0.00 0.00 0.00 3.51
5054 5712 8.164057 AGTGAACCTCTTTCCTATTCCTATTT 57.836 34.615 0.00 0.00 32.58 1.40
5095 5764 9.988350 AAAATAAACATTAGCGTAGACTCAATG 57.012 29.630 0.00 0.00 33.75 2.82
5128 5822 8.049721 AGGAATTCTTTCTATCCTCGACAATTT 58.950 33.333 5.23 0.00 37.80 1.82
5135 5829 8.755696 CTATCAAGGAATTCTTTCTATCCTCG 57.244 38.462 5.23 0.00 41.39 4.63
5167 5861 5.534654 TCCTTTGGTTTGTAGGAGTTGAATG 59.465 40.000 0.00 0.00 33.23 2.67
5172 5866 4.412528 AGAGTCCTTTGGTTTGTAGGAGTT 59.587 41.667 0.00 0.00 40.86 3.01
5196 5890 8.862325 TCAAAGGACATCTCTTTTATAGCAAA 57.138 30.769 0.00 0.00 32.72 3.68
5197 5891 9.466497 AATCAAAGGACATCTCTTTTATAGCAA 57.534 29.630 0.00 0.00 32.72 3.91
5198 5892 9.113838 GAATCAAAGGACATCTCTTTTATAGCA 57.886 33.333 0.00 0.00 32.72 3.49
5201 5895 9.958180 TGTGAATCAAAGGACATCTCTTTTATA 57.042 29.630 0.00 0.00 32.72 0.98
5202 5896 8.868522 TGTGAATCAAAGGACATCTCTTTTAT 57.131 30.769 0.00 0.00 32.72 1.40
5204 5898 7.449395 TGATGTGAATCAAAGGACATCTCTTTT 59.551 33.333 0.00 0.00 43.38 2.27
5205 5899 6.944290 TGATGTGAATCAAAGGACATCTCTTT 59.056 34.615 0.00 0.00 43.38 2.52
5206 5900 6.479006 TGATGTGAATCAAAGGACATCTCTT 58.521 36.000 0.00 0.00 43.38 2.85
5207 5901 6.058553 TGATGTGAATCAAAGGACATCTCT 57.941 37.500 0.00 0.00 43.38 3.10
5208 5902 6.939132 ATGATGTGAATCAAAGGACATCTC 57.061 37.500 0.00 0.00 43.38 2.75
5209 5903 8.215736 TCATATGATGTGAATCAAAGGACATCT 58.784 33.333 0.00 0.00 43.38 2.90
5210 5904 8.387190 TCATATGATGTGAATCAAAGGACATC 57.613 34.615 0.00 0.00 43.31 3.06
5211 5905 8.935614 ATCATATGATGTGAATCAAAGGACAT 57.064 30.769 17.51 0.00 33.83 3.06
5212 5906 9.498176 CTATCATATGATGTGAATCAAAGGACA 57.502 33.333 25.44 1.61 36.05 4.02
5213 5907 8.944029 CCTATCATATGATGTGAATCAAAGGAC 58.056 37.037 25.44 0.00 36.05 3.85
5214 5908 8.883302 TCCTATCATATGATGTGAATCAAAGGA 58.117 33.333 25.44 21.28 36.05 3.36
5215 5909 9.511272 TTCCTATCATATGATGTGAATCAAAGG 57.489 33.333 25.44 19.64 36.05 3.11
5276 5970 2.821969 CTGAGGTCATTTGGTTTGGAGG 59.178 50.000 0.00 0.00 0.00 4.30
5339 6035 3.432252 CCTCTGTACAAATGAACACCGAC 59.568 47.826 0.00 0.00 0.00 4.79
5348 6044 9.838339 AAATTCTCTATACCCTCTGTACAAATG 57.162 33.333 0.00 0.00 30.62 2.32
5380 6076 2.032675 GCATTTGGCCTTTTCGCAAAAA 59.967 40.909 3.32 0.00 35.34 1.94
5414 6110 1.804601 AAGGGCGTGTGCTACTTAAC 58.195 50.000 0.00 0.00 42.25 2.01
5427 6123 1.232119 AAGGTGTTTTCGTAAGGGCG 58.768 50.000 0.00 0.00 38.47 6.13
5429 6125 7.910441 TTCTATAAAGGTGTTTTCGTAAGGG 57.090 36.000 0.00 0.00 38.47 3.95
5470 6166 3.872511 TTTCGACACGCCTAAGGATTA 57.127 42.857 0.00 0.00 0.00 1.75
5471 6167 2.754946 TTTCGACACGCCTAAGGATT 57.245 45.000 0.00 0.00 0.00 3.01
5472 6168 2.431057 AGATTTCGACACGCCTAAGGAT 59.569 45.455 0.00 0.00 0.00 3.24
5473 6169 1.822990 AGATTTCGACACGCCTAAGGA 59.177 47.619 0.00 0.00 0.00 3.36
5474 6170 2.295253 AGATTTCGACACGCCTAAGG 57.705 50.000 0.00 0.00 0.00 2.69
5475 6171 3.512680 AGAAGATTTCGACACGCCTAAG 58.487 45.455 0.00 0.00 34.02 2.18
5476 6172 3.587797 AGAAGATTTCGACACGCCTAA 57.412 42.857 0.00 0.00 34.02 2.69
5477 6173 3.508762 GAAGAAGATTTCGACACGCCTA 58.491 45.455 0.00 0.00 34.02 3.93
5478 6174 2.338500 GAAGAAGATTTCGACACGCCT 58.662 47.619 0.00 0.00 34.02 5.52
5479 6175 1.393883 GGAAGAAGATTTCGACACGCC 59.606 52.381 0.00 0.00 34.02 5.68
5480 6176 2.338500 AGGAAGAAGATTTCGACACGC 58.662 47.619 0.00 0.00 34.02 5.34
5481 6177 2.924290 GGAGGAAGAAGATTTCGACACG 59.076 50.000 0.00 0.00 34.02 4.49
5482 6178 3.263261 GGGAGGAAGAAGATTTCGACAC 58.737 50.000 0.00 0.00 34.02 3.67
5483 6179 2.094182 CGGGAGGAAGAAGATTTCGACA 60.094 50.000 0.00 0.00 34.02 4.35
5484 6180 2.541556 CGGGAGGAAGAAGATTTCGAC 58.458 52.381 0.00 0.00 34.02 4.20
5485 6181 1.134788 GCGGGAGGAAGAAGATTTCGA 60.135 52.381 0.00 0.00 34.02 3.71
5486 6182 1.291132 GCGGGAGGAAGAAGATTTCG 58.709 55.000 0.00 0.00 34.02 3.46
5487 6183 2.403252 TGCGGGAGGAAGAAGATTTC 57.597 50.000 0.00 0.00 0.00 2.17
5488 6184 2.422093 GGATGCGGGAGGAAGAAGATTT 60.422 50.000 0.00 0.00 0.00 2.17
5489 6185 1.141858 GGATGCGGGAGGAAGAAGATT 59.858 52.381 0.00 0.00 0.00 2.40
5490 6186 0.761802 GGATGCGGGAGGAAGAAGAT 59.238 55.000 0.00 0.00 0.00 2.40
5491 6187 2.212327 GGATGCGGGAGGAAGAAGA 58.788 57.895 0.00 0.00 0.00 2.87
5492 6188 4.865865 GGATGCGGGAGGAAGAAG 57.134 61.111 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.