Multiple sequence alignment - TraesCS4A01G271800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G271800 chr4A 100.000 6935 0 0 1 6935 583708366 583701432 0.000000e+00 12807.0
1 TraesCS4A01G271800 chr4D 96.457 2512 38 15 1231 3721 16814844 16817325 0.000000e+00 4098.0
2 TraesCS4A01G271800 chr4D 93.617 1833 81 20 4755 6567 16818220 16820036 0.000000e+00 2704.0
3 TraesCS4A01G271800 chr4D 93.633 1225 47 11 360 1579 16813279 16814477 0.000000e+00 1801.0
4 TraesCS4A01G271800 chr4D 95.258 717 31 3 3741 4456 16817505 16818219 0.000000e+00 1133.0
5 TraesCS4A01G271800 chr4D 95.139 432 18 3 1 430 16812865 16813295 0.000000e+00 678.0
6 TraesCS4A01G271800 chr4D 97.033 337 10 0 1243 1579 16814497 16814833 1.010000e-157 568.0
7 TraesCS4A01G271800 chr4B 91.057 2214 127 38 4736 6917 28734573 28736747 0.000000e+00 2926.0
8 TraesCS4A01G271800 chr4B 97.350 1283 29 3 2441 3721 28732383 28733662 0.000000e+00 2176.0
9 TraesCS4A01G271800 chr4B 93.990 1198 42 7 1243 2412 28731196 28732391 0.000000e+00 1786.0
10 TraesCS4A01G271800 chr4B 95.957 742 25 5 3741 4481 28733841 28734578 0.000000e+00 1199.0
11 TraesCS4A01G271800 chr4B 93.149 759 38 5 1 748 28729151 28729906 0.000000e+00 1101.0
12 TraesCS4A01G271800 chr4B 95.265 697 21 6 886 1579 28730489 28731176 0.000000e+00 1094.0
13 TraesCS4A01G271800 chrUn 100.000 397 0 0 2939 3335 479066988 479067384 0.000000e+00 734.0
14 TraesCS4A01G271800 chr5B 82.353 119 16 5 4482 4598 711339502 711339617 1.590000e-16 99.0
15 TraesCS4A01G271800 chr5B 97.143 35 0 1 3747 3780 12334900 12334866 2.700000e-04 58.4
16 TraesCS4A01G271800 chr5B 100.000 30 0 0 3750 3779 398073746 398073775 1.000000e-03 56.5
17 TraesCS4A01G271800 chr2B 87.179 78 6 3 4457 4530 631204474 631204551 1.240000e-12 86.1
18 TraesCS4A01G271800 chr3B 92.857 56 4 0 4475 4530 813114415 813114360 1.600000e-11 82.4
19 TraesCS4A01G271800 chr2D 100.000 31 0 0 3750 3780 346087347 346087317 2.700000e-04 58.4
20 TraesCS4A01G271800 chr2A 100.000 31 0 0 3750 3780 459797753 459797723 2.700000e-04 58.4
21 TraesCS4A01G271800 chr7B 100.000 30 0 0 3750 3779 61605362 61605391 1.000000e-03 56.5
22 TraesCS4A01G271800 chr6B 100.000 30 0 0 3750 3779 48548698 48548727 1.000000e-03 56.5
23 TraesCS4A01G271800 chr6A 94.444 36 2 0 4916 4951 399834350 399834315 1.000000e-03 56.5
24 TraesCS4A01G271800 chr5A 100.000 30 0 0 3750 3779 439864807 439864836 1.000000e-03 56.5
25 TraesCS4A01G271800 chr6D 100.000 28 0 0 4924 4951 276147301 276147328 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G271800 chr4A 583701432 583708366 6934 True 12807.000000 12807 100.000000 1 6935 1 chr4A.!!$R1 6934
1 TraesCS4A01G271800 chr4D 16812865 16820036 7171 False 1830.333333 4098 95.189500 1 6567 6 chr4D.!!$F1 6566
2 TraesCS4A01G271800 chr4B 28729151 28736747 7596 False 1713.666667 2926 94.461333 1 6917 6 chr4B.!!$F1 6916

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.314302 GACCAGTATCGTCCATCCCG 59.686 60.000 0.00 0.00 0.00 5.14 F
517 579 1.066143 ACCGGACGCTTGAGAAATCAT 60.066 47.619 9.46 0.00 0.00 2.45 F
1240 1754 0.462047 CACCCTAGGCCTAAGCGTTG 60.462 60.000 14.85 0.28 41.24 4.10 F
1241 1755 1.523938 CCCTAGGCCTAAGCGTTGC 60.524 63.158 14.85 0.00 41.24 4.17 F
2707 3937 1.642952 GCTTGAGCTAGCTGGTGCAC 61.643 60.000 24.99 8.80 38.84 4.57 F
4574 5965 0.105039 GTAGAGGGAGGCAATCACGG 59.895 60.000 0.00 0.00 35.97 4.94 F
4604 5995 0.035152 AAGGAAGGATGCATGCACGA 60.035 50.000 25.37 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1234 1748 0.250234 TAGATGGAAGCAGCAACGCT 59.750 50.000 0.00 0.0 46.67 5.07 R
2119 3349 1.836802 AGCCATTCCTCCAGAACTCTC 59.163 52.381 0.00 0.0 37.29 3.20 R
2707 3937 3.947868 ACTTGACATCCATCTCAACTGG 58.052 45.455 0.00 0.0 34.93 4.00 R
2759 3989 7.606858 TGATTCTGATTACAAGCTTCTTCAG 57.393 36.000 14.10 14.1 33.55 3.02 R
4585 5976 0.035152 TCGTGCATGCATCCTTCCTT 60.035 50.000 25.64 0.0 0.00 3.36 R
5503 6898 0.030235 GGCCGACCACACTTGAAAAC 59.970 55.000 0.00 0.0 35.26 2.43 R
6392 7804 0.107703 TGCGACCCCAACTCATCATC 60.108 55.000 0.00 0.0 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
159 160 3.373565 CCTCCCCTGCAAAACCGC 61.374 66.667 0.00 0.00 0.00 5.68
240 241 0.314302 GACCAGTATCGTCCATCCCG 59.686 60.000 0.00 0.00 0.00 5.14
247 248 2.191786 ATCGTCCATCCCGGCAACAA 62.192 55.000 0.00 0.00 33.14 2.83
276 277 1.758280 GCCATTCATCTGGGCATTTCA 59.242 47.619 0.00 0.00 46.92 2.69
318 319 2.158957 TCAGCGTATAGGGGCAAAGAAG 60.159 50.000 0.00 0.00 0.00 2.85
326 327 2.672996 GGCAAAGAAGGGCTGCGA 60.673 61.111 0.00 0.00 36.93 5.10
370 372 3.717294 GGGGAAGAAGCTGCGGGA 61.717 66.667 0.00 0.00 0.00 5.14
517 579 1.066143 ACCGGACGCTTGAGAAATCAT 60.066 47.619 9.46 0.00 0.00 2.45
518 580 1.594862 CCGGACGCTTGAGAAATCATC 59.405 52.381 0.00 0.00 0.00 2.92
519 581 2.270923 CGGACGCTTGAGAAATCATCA 58.729 47.619 0.00 0.00 0.00 3.07
535 597 4.341366 TCATCAGAGCAGAAACAGTTGA 57.659 40.909 0.00 0.00 0.00 3.18
609 671 4.781934 ACCTGACTGATTAAAGCCCATAC 58.218 43.478 0.00 0.00 0.00 2.39
610 672 4.137543 CCTGACTGATTAAAGCCCATACC 58.862 47.826 0.00 0.00 0.00 2.73
612 674 3.452990 TGACTGATTAAAGCCCATACCGA 59.547 43.478 0.00 0.00 0.00 4.69
615 677 4.652421 ACTGATTAAAGCCCATACCGAGTA 59.348 41.667 0.00 0.00 0.00 2.59
619 681 6.324512 TGATTAAAGCCCATACCGAGTACTAA 59.675 38.462 0.00 0.00 0.00 2.24
620 682 6.543430 TTAAAGCCCATACCGAGTACTAAA 57.457 37.500 0.00 0.00 0.00 1.85
630 692 3.259902 CCGAGTACTAAAACTGGGCTTC 58.740 50.000 0.00 0.00 38.34 3.86
803 870 4.951963 CGATTCGCTCCGGCTCCC 62.952 72.222 0.00 0.00 36.09 4.30
930 1442 3.862991 GCTCCGGAACCCTAGGGC 61.863 72.222 28.88 12.52 39.32 5.19
1228 1742 1.260538 TGAGCTCAGCCACACCCTAG 61.261 60.000 13.74 0.00 0.00 3.02
1234 1748 3.735725 GCCACACCCTAGGCCTAA 58.264 61.111 14.85 0.00 45.18 2.69
1235 1749 1.527370 GCCACACCCTAGGCCTAAG 59.473 63.158 14.85 7.79 45.18 2.18
1236 1750 1.527370 CCACACCCTAGGCCTAAGC 59.473 63.158 14.85 0.00 38.76 3.09
1238 1752 1.305887 ACACCCTAGGCCTAAGCGT 60.306 57.895 14.85 7.07 41.24 5.07
1240 1754 0.462047 CACCCTAGGCCTAAGCGTTG 60.462 60.000 14.85 0.28 41.24 4.10
1241 1755 1.523938 CCCTAGGCCTAAGCGTTGC 60.524 63.158 14.85 0.00 41.24 4.17
1271 2140 6.211584 TCCATCTAGGGTTATGCATCTAGTTC 59.788 42.308 15.87 0.07 38.24 3.01
1277 2146 4.634443 GGGTTATGCATCTAGTTCAACGTT 59.366 41.667 0.19 0.00 0.00 3.99
1284 2153 4.610680 GCATCTAGTTCAACGTTTGTCACC 60.611 45.833 0.00 0.00 0.00 4.02
1333 2202 1.906574 AGCTTCAGGACACGGGAAATA 59.093 47.619 0.00 0.00 0.00 1.40
1471 2341 5.184864 TCAATCGGTGTGGCAAATTAGATTT 59.815 36.000 0.00 0.00 0.00 2.17
1497 2696 5.692204 AGCGAGATATTGTTTGTTATCCGAG 59.308 40.000 0.00 0.00 0.00 4.63
1504 2703 4.620589 TGTTTGTTATCCGAGGGTTGTA 57.379 40.909 0.00 0.00 0.00 2.41
1982 3209 5.103000 GCTACAGAGAAAGATGCTCGTTTA 58.897 41.667 0.00 0.00 37.46 2.01
2119 3349 2.168728 GGTACCAGCCCTTCTGTTAGAG 59.831 54.545 7.15 0.00 41.25 2.43
2338 3568 4.401519 ACCAGCAGAAGAATGAAATGGATG 59.598 41.667 0.00 0.00 0.00 3.51
2707 3937 1.642952 GCTTGAGCTAGCTGGTGCAC 61.643 60.000 24.99 8.80 38.84 4.57
2759 3989 3.250762 GCAAATTTGCCTCAAAAAGGGAC 59.749 43.478 29.05 0.00 46.67 4.46
2876 4106 5.821516 AATACACGAGTTCCTCAGAGTAG 57.178 43.478 0.00 0.00 0.00 2.57
3643 4874 6.970043 CCTTGTATTGTCTAGAACTTCTCTCG 59.030 42.308 0.00 0.00 35.41 4.04
3666 4897 2.962859 ACTTTTGCCCTTCAGGTGAAT 58.037 42.857 0.00 0.00 38.26 2.57
3685 4916 6.020440 GGTGAATGCATAACAAAATCATGTCG 60.020 38.462 0.00 0.00 31.81 4.35
3725 4956 8.519492 TGCTTGATATTTTTAAACTTCACTGC 57.481 30.769 0.00 0.00 0.00 4.40
3728 4959 9.132521 CTTGATATTTTTAAACTTCACTGCCAG 57.867 33.333 0.00 0.00 0.00 4.85
3729 4960 7.601856 TGATATTTTTAAACTTCACTGCCAGG 58.398 34.615 0.00 0.00 0.00 4.45
3730 4961 4.664150 TTTTTAAACTTCACTGCCAGGG 57.336 40.909 0.00 0.00 0.00 4.45
3731 4962 2.286365 TTAAACTTCACTGCCAGGGG 57.714 50.000 0.00 0.00 0.00 4.79
3733 4964 0.261696 AAACTTCACTGCCAGGGGTT 59.738 50.000 0.00 0.00 0.00 4.11
3734 4965 1.145571 AACTTCACTGCCAGGGGTTA 58.854 50.000 0.00 0.00 0.00 2.85
3735 4966 1.145571 ACTTCACTGCCAGGGGTTAA 58.854 50.000 0.00 0.00 0.00 2.01
3737 4968 2.094675 CTTCACTGCCAGGGGTTAATG 58.905 52.381 0.00 0.00 0.00 1.90
3738 4969 1.072266 TCACTGCCAGGGGTTAATGT 58.928 50.000 0.00 0.00 0.00 2.71
3739 4970 1.427368 TCACTGCCAGGGGTTAATGTT 59.573 47.619 0.00 0.00 0.00 2.71
3741 4972 1.427368 ACTGCCAGGGGTTAATGTTCA 59.573 47.619 0.00 0.00 0.00 3.18
3742 4973 1.818674 CTGCCAGGGGTTAATGTTCAC 59.181 52.381 0.00 0.00 0.00 3.18
3746 4977 2.091541 CAGGGGTTAATGTTCACGCAT 58.908 47.619 0.00 0.00 0.00 4.73
3747 4978 2.491693 CAGGGGTTAATGTTCACGCATT 59.508 45.455 0.00 0.00 41.42 3.56
3748 4979 2.752903 AGGGGTTAATGTTCACGCATTC 59.247 45.455 0.00 0.00 39.50 2.67
3749 4980 2.752903 GGGGTTAATGTTCACGCATTCT 59.247 45.455 0.00 0.00 39.50 2.40
3750 4981 3.942748 GGGGTTAATGTTCACGCATTCTA 59.057 43.478 0.00 0.00 39.50 2.10
4118 5508 8.135382 TGAGTAGAGGACAATTAGCTTAACTT 57.865 34.615 0.00 0.00 0.00 2.66
4195 5585 9.766277 TTCAAATCAACATTAAAAAGTTGTTGC 57.234 25.926 12.12 0.00 46.13 4.17
4200 5590 8.316640 TCAACATTAAAAAGTTGTTGCAGTTT 57.683 26.923 12.12 0.00 46.13 2.66
4356 5747 5.001232 GTCCTGCTTAGGTTAATGTTCACA 58.999 41.667 0.00 0.00 0.00 3.58
4411 5802 7.440505 TTGTACTAAGCCCCAATACATCTTA 57.559 36.000 0.00 0.00 0.00 2.10
4463 5854 7.343316 ACTGATAGAGCTGGAAGTAATGTAGTT 59.657 37.037 0.00 0.00 35.30 2.24
4483 5874 9.298250 TGTAGTTGACTATGATATACTTCCTCC 57.702 37.037 0.00 0.00 0.00 4.30
4486 5877 9.084533 AGTTGACTATGATATACTTCCTCCTTC 57.915 37.037 0.00 0.00 0.00 3.46
4487 5878 8.308207 GTTGACTATGATATACTTCCTCCTTCC 58.692 40.741 0.00 0.00 0.00 3.46
4488 5879 6.954684 TGACTATGATATACTTCCTCCTTCCC 59.045 42.308 0.00 0.00 0.00 3.97
4489 5880 6.875469 ACTATGATATACTTCCTCCTTCCCA 58.125 40.000 0.00 0.00 0.00 4.37
4490 5881 7.491681 ACTATGATATACTTCCTCCTTCCCAT 58.508 38.462 0.00 0.00 0.00 4.00
4491 5882 8.633724 ACTATGATATACTTCCTCCTTCCCATA 58.366 37.037 0.00 0.00 0.00 2.74
4492 5883 9.667607 CTATGATATACTTCCTCCTTCCCATAT 57.332 37.037 0.00 0.00 0.00 1.78
4493 5884 8.940012 ATGATATACTTCCTCCTTCCCATATT 57.060 34.615 0.00 0.00 0.00 1.28
4499 5890 7.575499 ACTTCCTCCTTCCCATATTATTAGG 57.425 40.000 0.00 0.00 0.00 2.69
4500 5891 6.012421 ACTTCCTCCTTCCCATATTATTAGGC 60.012 42.308 0.00 0.00 0.00 3.93
4501 5892 4.469945 TCCTCCTTCCCATATTATTAGGCG 59.530 45.833 0.00 0.00 0.00 5.52
4502 5893 4.225267 CCTCCTTCCCATATTATTAGGCGT 59.775 45.833 0.00 0.00 0.00 5.68
4503 5894 5.424252 CCTCCTTCCCATATTATTAGGCGTA 59.576 44.000 0.00 0.00 0.00 4.42
4504 5895 6.099845 CCTCCTTCCCATATTATTAGGCGTAT 59.900 42.308 0.00 0.00 0.00 3.06
4505 5896 7.365652 CCTCCTTCCCATATTATTAGGCGTATT 60.366 40.741 0.00 0.00 0.00 1.89
4506 5897 8.612486 TCCTTCCCATATTATTAGGCGTATTA 57.388 34.615 0.00 0.00 0.00 0.98
4507 5898 8.701895 TCCTTCCCATATTATTAGGCGTATTAG 58.298 37.037 0.00 0.00 0.00 1.73
4508 5899 8.483758 CCTTCCCATATTATTAGGCGTATTAGT 58.516 37.037 0.00 0.00 0.00 2.24
4517 5908 8.900511 TTATTAGGCGTATTAGTATTAGCACG 57.099 34.615 0.00 0.00 0.00 5.34
4518 5909 6.558771 TTAGGCGTATTAGTATTAGCACGA 57.441 37.500 0.00 0.00 0.00 4.35
4519 5910 5.443185 AGGCGTATTAGTATTAGCACGAA 57.557 39.130 0.00 0.00 0.00 3.85
4520 5911 5.458891 AGGCGTATTAGTATTAGCACGAAG 58.541 41.667 0.00 0.00 0.00 3.79
4521 5912 5.240183 AGGCGTATTAGTATTAGCACGAAGA 59.760 40.000 0.00 0.00 0.00 2.87
4522 5913 6.072064 AGGCGTATTAGTATTAGCACGAAGAT 60.072 38.462 0.00 0.00 0.00 2.40
4523 5914 6.585322 GGCGTATTAGTATTAGCACGAAGATT 59.415 38.462 0.00 0.00 0.00 2.40
4524 5915 7.752239 GGCGTATTAGTATTAGCACGAAGATTA 59.248 37.037 0.00 0.00 0.00 1.75
4525 5916 8.786955 GCGTATTAGTATTAGCACGAAGATTAG 58.213 37.037 0.00 0.00 0.00 1.73
4526 5917 8.786955 CGTATTAGTATTAGCACGAAGATTAGC 58.213 37.037 0.00 0.00 0.00 3.09
4527 5918 7.798486 ATTAGTATTAGCACGAAGATTAGCG 57.202 36.000 0.00 0.00 0.00 4.26
4528 5919 3.982058 AGTATTAGCACGAAGATTAGCGC 59.018 43.478 0.00 0.00 0.00 5.92
4529 5920 2.287393 TTAGCACGAAGATTAGCGCA 57.713 45.000 11.47 0.00 0.00 6.09
4530 5921 1.556564 TAGCACGAAGATTAGCGCAC 58.443 50.000 11.47 0.00 0.00 5.34
4531 5922 1.084370 AGCACGAAGATTAGCGCACC 61.084 55.000 11.47 0.00 0.00 5.01
4532 5923 1.358725 GCACGAAGATTAGCGCACCA 61.359 55.000 11.47 0.00 0.00 4.17
4533 5924 1.075542 CACGAAGATTAGCGCACCAA 58.924 50.000 11.47 0.00 0.00 3.67
4534 5925 1.665679 CACGAAGATTAGCGCACCAAT 59.334 47.619 11.47 5.82 0.00 3.16
4535 5926 2.095853 CACGAAGATTAGCGCACCAATT 59.904 45.455 11.47 0.00 0.00 2.32
4536 5927 3.308595 CACGAAGATTAGCGCACCAATTA 59.691 43.478 11.47 0.00 0.00 1.40
4537 5928 3.936453 ACGAAGATTAGCGCACCAATTAA 59.064 39.130 11.47 0.00 0.00 1.40
4538 5929 4.574828 ACGAAGATTAGCGCACCAATTAAT 59.425 37.500 11.47 3.26 0.00 1.40
4539 5930 5.140177 CGAAGATTAGCGCACCAATTAATC 58.860 41.667 11.47 13.06 34.35 1.75
4540 5931 4.732285 AGATTAGCGCACCAATTAATCG 57.268 40.909 11.47 0.00 37.51 3.34
4541 5932 2.748461 TTAGCGCACCAATTAATCGC 57.252 45.000 11.47 9.71 45.34 4.58
4544 5935 2.300623 GCGCACCAATTAATCGCTAG 57.699 50.000 0.30 0.00 42.19 3.42
4545 5936 1.597663 GCGCACCAATTAATCGCTAGT 59.402 47.619 0.30 0.00 42.19 2.57
4546 5937 2.031683 GCGCACCAATTAATCGCTAGTT 59.968 45.455 0.30 0.00 42.19 2.24
4547 5938 3.607439 CGCACCAATTAATCGCTAGTTG 58.393 45.455 0.00 0.00 0.00 3.16
4548 5939 3.308595 CGCACCAATTAATCGCTAGTTGA 59.691 43.478 0.00 0.00 30.64 3.18
4549 5940 4.201773 CGCACCAATTAATCGCTAGTTGAA 60.202 41.667 0.00 0.00 30.64 2.69
4550 5941 5.028375 GCACCAATTAATCGCTAGTTGAAC 58.972 41.667 0.00 0.00 30.64 3.18
4551 5942 5.569413 CACCAATTAATCGCTAGTTGAACC 58.431 41.667 0.00 0.00 30.64 3.62
4552 5943 5.123186 CACCAATTAATCGCTAGTTGAACCA 59.877 40.000 0.00 0.00 30.64 3.67
4553 5944 5.885912 ACCAATTAATCGCTAGTTGAACCAT 59.114 36.000 0.00 0.00 30.64 3.55
4554 5945 6.038271 ACCAATTAATCGCTAGTTGAACCATC 59.962 38.462 0.00 0.00 30.64 3.51
4555 5946 5.907197 ATTAATCGCTAGTTGAACCATCG 57.093 39.130 0.00 0.00 0.00 3.84
4556 5947 2.961526 ATCGCTAGTTGAACCATCGT 57.038 45.000 0.00 0.00 0.00 3.73
4557 5948 4.380841 AATCGCTAGTTGAACCATCGTA 57.619 40.909 0.00 0.00 0.00 3.43
4558 5949 3.416119 TCGCTAGTTGAACCATCGTAG 57.584 47.619 0.00 0.00 0.00 3.51
4559 5950 3.011818 TCGCTAGTTGAACCATCGTAGA 58.988 45.455 0.00 0.00 45.75 2.59
4560 5951 3.064958 TCGCTAGTTGAACCATCGTAGAG 59.935 47.826 0.00 0.00 43.63 2.43
4561 5952 3.707793 GCTAGTTGAACCATCGTAGAGG 58.292 50.000 0.00 0.00 43.63 3.69
4570 5961 2.447244 CATCGTAGAGGGAGGCAATC 57.553 55.000 0.00 0.00 43.63 2.67
4571 5962 1.688735 CATCGTAGAGGGAGGCAATCA 59.311 52.381 0.00 0.00 43.63 2.57
4572 5963 1.112113 TCGTAGAGGGAGGCAATCAC 58.888 55.000 0.00 0.00 0.00 3.06
4573 5964 0.249073 CGTAGAGGGAGGCAATCACG 60.249 60.000 0.00 0.00 35.97 4.35
4574 5965 0.105039 GTAGAGGGAGGCAATCACGG 59.895 60.000 0.00 0.00 35.97 4.94
4575 5966 1.686325 TAGAGGGAGGCAATCACGGC 61.686 60.000 0.00 0.00 35.97 5.68
4576 5967 3.011517 AGGGAGGCAATCACGGCT 61.012 61.111 0.00 0.00 45.92 5.52
4580 5971 2.270205 AGGCAATCACGGCTCAGG 59.730 61.111 0.00 0.00 37.13 3.86
4581 5972 2.268920 GGCAATCACGGCTCAGGA 59.731 61.111 0.00 0.00 0.00 3.86
4582 5973 1.377202 GGCAATCACGGCTCAGGAA 60.377 57.895 0.00 0.00 0.00 3.36
4583 5974 0.960364 GGCAATCACGGCTCAGGAAA 60.960 55.000 0.00 0.00 0.00 3.13
4584 5975 0.881118 GCAATCACGGCTCAGGAAAA 59.119 50.000 0.00 0.00 0.00 2.29
4585 5976 1.269448 GCAATCACGGCTCAGGAAAAA 59.731 47.619 0.00 0.00 0.00 1.94
4602 5993 3.323751 AAAAAGGAAGGATGCATGCAC 57.676 42.857 25.37 16.53 0.00 4.57
4603 5994 0.813184 AAAGGAAGGATGCATGCACG 59.187 50.000 25.37 0.00 0.00 5.34
4604 5995 0.035152 AAGGAAGGATGCATGCACGA 60.035 50.000 25.37 0.00 0.00 4.35
4605 5996 0.182061 AGGAAGGATGCATGCACGAT 59.818 50.000 25.37 7.40 0.00 3.73
4606 5997 0.590195 GGAAGGATGCATGCACGATC 59.410 55.000 25.37 16.97 0.00 3.69
4607 5998 1.590932 GAAGGATGCATGCACGATCT 58.409 50.000 25.37 14.68 0.00 2.75
4608 5999 1.530293 GAAGGATGCATGCACGATCTC 59.470 52.381 25.37 16.16 0.00 2.75
4609 6000 0.757512 AGGATGCATGCACGATCTCT 59.242 50.000 25.37 12.81 0.00 3.10
4610 6001 1.140452 AGGATGCATGCACGATCTCTT 59.860 47.619 25.37 9.95 0.00 2.85
4611 6002 1.945394 GGATGCATGCACGATCTCTTT 59.055 47.619 25.37 2.84 0.00 2.52
4612 6003 2.357009 GGATGCATGCACGATCTCTTTT 59.643 45.455 25.37 1.94 0.00 2.27
4613 6004 2.905959 TGCATGCACGATCTCTTTTG 57.094 45.000 18.46 0.00 0.00 2.44
4614 6005 2.425539 TGCATGCACGATCTCTTTTGA 58.574 42.857 18.46 0.00 0.00 2.69
4615 6006 2.160219 TGCATGCACGATCTCTTTTGAC 59.840 45.455 18.46 0.00 0.00 3.18
4616 6007 2.417933 GCATGCACGATCTCTTTTGACT 59.582 45.455 14.21 0.00 0.00 3.41
4617 6008 3.618594 GCATGCACGATCTCTTTTGACTA 59.381 43.478 14.21 0.00 0.00 2.59
4618 6009 4.493220 GCATGCACGATCTCTTTTGACTAC 60.493 45.833 14.21 0.00 0.00 2.73
4619 6010 3.585862 TGCACGATCTCTTTTGACTACC 58.414 45.455 0.00 0.00 0.00 3.18
4620 6011 3.258372 TGCACGATCTCTTTTGACTACCT 59.742 43.478 0.00 0.00 0.00 3.08
4621 6012 3.860536 GCACGATCTCTTTTGACTACCTC 59.139 47.826 0.00 0.00 0.00 3.85
4622 6013 4.425520 CACGATCTCTTTTGACTACCTCC 58.574 47.826 0.00 0.00 0.00 4.30
4623 6014 4.082190 CACGATCTCTTTTGACTACCTCCA 60.082 45.833 0.00 0.00 0.00 3.86
4624 6015 4.712337 ACGATCTCTTTTGACTACCTCCAT 59.288 41.667 0.00 0.00 0.00 3.41
4625 6016 5.046529 CGATCTCTTTTGACTACCTCCATG 58.953 45.833 0.00 0.00 0.00 3.66
4626 6017 5.163509 CGATCTCTTTTGACTACCTCCATGA 60.164 44.000 0.00 0.00 0.00 3.07
4627 6018 6.627087 ATCTCTTTTGACTACCTCCATGAA 57.373 37.500 0.00 0.00 0.00 2.57
4628 6019 6.433847 TCTCTTTTGACTACCTCCATGAAA 57.566 37.500 0.00 0.00 0.00 2.69
4629 6020 7.020827 TCTCTTTTGACTACCTCCATGAAAT 57.979 36.000 0.00 0.00 0.00 2.17
4630 6021 7.461749 TCTCTTTTGACTACCTCCATGAAATT 58.538 34.615 0.00 0.00 0.00 1.82
4631 6022 8.602424 TCTCTTTTGACTACCTCCATGAAATTA 58.398 33.333 0.00 0.00 0.00 1.40
4632 6023 8.792830 TCTTTTGACTACCTCCATGAAATTAG 57.207 34.615 0.00 0.00 0.00 1.73
4633 6024 7.336931 TCTTTTGACTACCTCCATGAAATTAGC 59.663 37.037 0.00 0.00 0.00 3.09
4634 6025 4.693283 TGACTACCTCCATGAAATTAGCG 58.307 43.478 0.00 0.00 0.00 4.26
4635 6026 4.404394 TGACTACCTCCATGAAATTAGCGA 59.596 41.667 0.00 0.00 0.00 4.93
4636 6027 5.070446 TGACTACCTCCATGAAATTAGCGAT 59.930 40.000 0.00 0.00 0.00 4.58
4637 6028 5.542779 ACTACCTCCATGAAATTAGCGATC 58.457 41.667 0.00 0.00 0.00 3.69
4638 6029 3.744660 ACCTCCATGAAATTAGCGATCC 58.255 45.455 0.00 0.00 0.00 3.36
4639 6030 3.392616 ACCTCCATGAAATTAGCGATCCT 59.607 43.478 0.00 0.00 0.00 3.24
4640 6031 3.999663 CCTCCATGAAATTAGCGATCCTC 59.000 47.826 0.00 0.00 0.00 3.71
4641 6032 4.503817 CCTCCATGAAATTAGCGATCCTCA 60.504 45.833 0.00 0.00 0.00 3.86
4642 6033 5.034852 TCCATGAAATTAGCGATCCTCAA 57.965 39.130 0.00 0.00 0.00 3.02
4643 6034 5.624159 TCCATGAAATTAGCGATCCTCAAT 58.376 37.500 0.00 0.00 0.00 2.57
4644 6035 6.768483 TCCATGAAATTAGCGATCCTCAATA 58.232 36.000 0.00 0.00 0.00 1.90
4645 6036 7.223584 TCCATGAAATTAGCGATCCTCAATAA 58.776 34.615 0.00 0.00 0.00 1.40
4646 6037 7.173218 TCCATGAAATTAGCGATCCTCAATAAC 59.827 37.037 0.00 0.00 0.00 1.89
4647 6038 7.173907 CCATGAAATTAGCGATCCTCAATAACT 59.826 37.037 0.00 0.00 0.00 2.24
4648 6039 9.208022 CATGAAATTAGCGATCCTCAATAACTA 57.792 33.333 0.00 0.00 0.00 2.24
4649 6040 8.589335 TGAAATTAGCGATCCTCAATAACTAC 57.411 34.615 0.00 0.00 0.00 2.73
4650 6041 8.421784 TGAAATTAGCGATCCTCAATAACTACT 58.578 33.333 0.00 0.00 0.00 2.57
4651 6042 8.819643 AAATTAGCGATCCTCAATAACTACTC 57.180 34.615 0.00 0.00 0.00 2.59
4652 6043 6.954487 TTAGCGATCCTCAATAACTACTCA 57.046 37.500 0.00 0.00 0.00 3.41
4653 6044 5.854010 AGCGATCCTCAATAACTACTCAA 57.146 39.130 0.00 0.00 0.00 3.02
4654 6045 5.837437 AGCGATCCTCAATAACTACTCAAG 58.163 41.667 0.00 0.00 0.00 3.02
4655 6046 5.594725 AGCGATCCTCAATAACTACTCAAGA 59.405 40.000 0.00 0.00 0.00 3.02
4656 6047 5.918011 GCGATCCTCAATAACTACTCAAGAG 59.082 44.000 0.00 0.00 0.00 2.85
4657 6048 6.238786 GCGATCCTCAATAACTACTCAAGAGA 60.239 42.308 3.73 0.00 0.00 3.10
4659 6050 7.521423 CGATCCTCAATAACTACTCAAGAGAGG 60.521 44.444 3.73 0.00 46.44 3.69
4660 6051 6.732487 TCCTCAATAACTACTCAAGAGAGGA 58.268 40.000 3.73 0.00 46.44 3.71
4670 6061 3.384467 ACTCAAGAGAGGAGATTAGCTGC 59.616 47.826 3.73 0.00 46.44 5.25
4671 6062 3.369175 TCAAGAGAGGAGATTAGCTGCA 58.631 45.455 1.02 0.00 37.43 4.41
4672 6063 3.966006 TCAAGAGAGGAGATTAGCTGCAT 59.034 43.478 1.02 0.00 37.43 3.96
4673 6064 4.408270 TCAAGAGAGGAGATTAGCTGCATT 59.592 41.667 1.02 0.00 37.43 3.56
4674 6065 5.104610 TCAAGAGAGGAGATTAGCTGCATTT 60.105 40.000 1.02 0.00 37.43 2.32
4675 6066 4.706035 AGAGAGGAGATTAGCTGCATTTG 58.294 43.478 1.02 0.00 37.43 2.32
4676 6067 3.212685 AGAGGAGATTAGCTGCATTTGC 58.787 45.455 1.02 0.00 37.43 3.68
4677 6068 2.292845 GAGGAGATTAGCTGCATTTGCC 59.707 50.000 1.02 0.00 41.18 4.52
4678 6069 2.091994 AGGAGATTAGCTGCATTTGCCT 60.092 45.455 1.02 0.00 41.18 4.75
4679 6070 2.692041 GGAGATTAGCTGCATTTGCCTT 59.308 45.455 1.02 0.00 41.18 4.35
4680 6071 3.490419 GGAGATTAGCTGCATTTGCCTTG 60.490 47.826 1.02 0.00 41.18 3.61
4681 6072 2.159142 AGATTAGCTGCATTTGCCTTGC 60.159 45.455 1.02 2.53 41.18 4.01
4688 6079 2.907634 TGCATTTGCCTTGCATATTGG 58.092 42.857 0.00 0.00 44.73 3.16
4689 6080 2.215196 GCATTTGCCTTGCATATTGGG 58.785 47.619 0.00 0.00 38.76 4.12
4690 6081 2.158928 GCATTTGCCTTGCATATTGGGA 60.159 45.455 0.00 0.00 38.76 4.37
4691 6082 3.495453 GCATTTGCCTTGCATATTGGGAT 60.495 43.478 0.00 0.00 38.76 3.85
4692 6083 4.710324 CATTTGCCTTGCATATTGGGATT 58.290 39.130 0.00 0.00 38.76 3.01
4693 6084 3.823281 TTGCCTTGCATATTGGGATTG 57.177 42.857 0.00 0.00 38.76 2.67
4694 6085 1.413445 TGCCTTGCATATTGGGATTGC 59.587 47.619 0.00 0.00 31.71 3.56
4695 6086 1.413445 GCCTTGCATATTGGGATTGCA 59.587 47.619 0.00 0.00 44.12 4.08
4696 6087 2.038033 GCCTTGCATATTGGGATTGCAT 59.962 45.455 0.00 0.00 45.04 3.96
4697 6088 3.659786 CCTTGCATATTGGGATTGCATG 58.340 45.455 0.00 0.86 45.04 4.06
4698 6089 3.322541 CCTTGCATATTGGGATTGCATGA 59.677 43.478 0.00 0.00 45.04 3.07
4699 6090 4.202274 CCTTGCATATTGGGATTGCATGAA 60.202 41.667 0.00 0.00 45.04 2.57
4700 6091 5.354842 TTGCATATTGGGATTGCATGAAA 57.645 34.783 0.00 0.00 45.04 2.69
4701 6092 5.354842 TGCATATTGGGATTGCATGAAAA 57.645 34.783 0.00 0.00 41.18 2.29
4702 6093 5.931294 TGCATATTGGGATTGCATGAAAAT 58.069 33.333 0.00 0.00 41.18 1.82
4703 6094 5.992829 TGCATATTGGGATTGCATGAAAATC 59.007 36.000 11.29 11.29 41.18 2.17
4704 6095 6.183361 TGCATATTGGGATTGCATGAAAATCT 60.183 34.615 16.58 4.75 41.18 2.40
4705 6096 7.015389 TGCATATTGGGATTGCATGAAAATCTA 59.985 33.333 16.58 7.67 41.18 1.98
4706 6097 7.874016 GCATATTGGGATTGCATGAAAATCTAA 59.126 33.333 16.58 13.41 36.40 2.10
4707 6098 9.938280 CATATTGGGATTGCATGAAAATCTAAT 57.062 29.630 16.58 17.19 34.95 1.73
4708 6099 9.938280 ATATTGGGATTGCATGAAAATCTAATG 57.062 29.630 16.58 0.00 34.95 1.90
4709 6100 5.603596 TGGGATTGCATGAAAATCTAATGC 58.396 37.500 16.58 0.01 45.51 3.56
4713 6104 3.360249 GCATGAAAATCTAATGCGCCT 57.640 42.857 4.18 0.00 37.55 5.52
4714 6105 4.488126 GCATGAAAATCTAATGCGCCTA 57.512 40.909 4.18 0.00 37.55 3.93
4715 6106 4.858935 GCATGAAAATCTAATGCGCCTAA 58.141 39.130 4.18 0.00 37.55 2.69
4716 6107 4.676924 GCATGAAAATCTAATGCGCCTAAC 59.323 41.667 4.18 0.00 37.55 2.34
4717 6108 5.733091 GCATGAAAATCTAATGCGCCTAACA 60.733 40.000 4.18 0.00 37.55 2.41
4718 6109 5.888691 TGAAAATCTAATGCGCCTAACAA 57.111 34.783 4.18 0.00 0.00 2.83
4719 6110 6.260870 TGAAAATCTAATGCGCCTAACAAA 57.739 33.333 4.18 0.00 0.00 2.83
4720 6111 6.862209 TGAAAATCTAATGCGCCTAACAAAT 58.138 32.000 4.18 0.00 0.00 2.32
4721 6112 7.319646 TGAAAATCTAATGCGCCTAACAAATT 58.680 30.769 4.18 0.00 0.00 1.82
4722 6113 7.275341 TGAAAATCTAATGCGCCTAACAAATTG 59.725 33.333 4.18 0.00 0.00 2.32
4723 6114 4.630894 TCTAATGCGCCTAACAAATTGG 57.369 40.909 4.18 0.00 0.00 3.16
4724 6115 2.671130 AATGCGCCTAACAAATTGGG 57.329 45.000 4.18 0.00 39.46 4.12
4725 6116 1.846007 ATGCGCCTAACAAATTGGGA 58.154 45.000 4.18 0.00 38.76 4.37
4726 6117 1.621992 TGCGCCTAACAAATTGGGAA 58.378 45.000 4.18 0.00 38.76 3.97
4727 6118 1.543802 TGCGCCTAACAAATTGGGAAG 59.456 47.619 4.18 0.00 38.76 3.46
4728 6119 1.135112 GCGCCTAACAAATTGGGAAGG 60.135 52.381 0.00 2.27 38.76 3.46
4729 6120 2.442413 CGCCTAACAAATTGGGAAGGA 58.558 47.619 12.66 0.00 38.76 3.36
4730 6121 2.423538 CGCCTAACAAATTGGGAAGGAG 59.576 50.000 12.66 7.12 38.76 3.69
4731 6122 2.760650 GCCTAACAAATTGGGAAGGAGG 59.239 50.000 12.66 4.45 38.76 4.30
4732 6123 3.365472 CCTAACAAATTGGGAAGGAGGG 58.635 50.000 0.00 0.00 38.76 4.30
4733 6124 3.011257 CCTAACAAATTGGGAAGGAGGGA 59.989 47.826 0.00 0.00 38.76 4.20
4734 6125 2.907458 ACAAATTGGGAAGGAGGGAG 57.093 50.000 0.00 0.00 0.00 4.30
4735 6126 2.073776 ACAAATTGGGAAGGAGGGAGT 58.926 47.619 0.00 0.00 0.00 3.85
4736 6127 3.265489 ACAAATTGGGAAGGAGGGAGTA 58.735 45.455 0.00 0.00 0.00 2.59
4737 6128 3.858638 ACAAATTGGGAAGGAGGGAGTAT 59.141 43.478 0.00 0.00 0.00 2.12
4738 6129 4.294970 ACAAATTGGGAAGGAGGGAGTATT 59.705 41.667 0.00 0.00 0.00 1.89
4739 6130 4.526438 AATTGGGAAGGAGGGAGTATTG 57.474 45.455 0.00 0.00 0.00 1.90
4740 6131 1.213296 TGGGAAGGAGGGAGTATTGC 58.787 55.000 0.00 0.00 0.00 3.56
4741 6132 0.106894 GGGAAGGAGGGAGTATTGCG 59.893 60.000 0.00 0.00 0.00 4.85
4742 6133 0.831307 GGAAGGAGGGAGTATTGCGT 59.169 55.000 0.00 0.00 0.00 5.24
4743 6134 2.037144 GGAAGGAGGGAGTATTGCGTA 58.963 52.381 0.00 0.00 0.00 4.42
4744 6135 2.433239 GGAAGGAGGGAGTATTGCGTAA 59.567 50.000 0.00 0.00 0.00 3.18
4889 6281 4.891627 TTGATTAGTGTGTGGTTGTGTG 57.108 40.909 0.00 0.00 0.00 3.82
4894 6286 1.160989 GTGTGTGGTTGTGTGTGTGA 58.839 50.000 0.00 0.00 0.00 3.58
4895 6287 1.742831 GTGTGTGGTTGTGTGTGTGAT 59.257 47.619 0.00 0.00 0.00 3.06
4901 6293 6.816140 TGTGTGGTTGTGTGTGTGATATATAG 59.184 38.462 0.00 0.00 0.00 1.31
4975 6367 0.469144 TGTTGGCCCAAACCTTCTCC 60.469 55.000 0.00 0.00 0.00 3.71
4979 6371 2.000048 TGGCCCAAACCTTCTCCTAAT 59.000 47.619 0.00 0.00 0.00 1.73
4980 6372 2.381961 TGGCCCAAACCTTCTCCTAATT 59.618 45.455 0.00 0.00 0.00 1.40
5017 6412 0.239879 CATTTTGGGGACGTCGGTTG 59.760 55.000 9.92 0.00 0.00 3.77
5025 6420 0.735287 GGACGTCGGTTGCTAGAACC 60.735 60.000 9.92 11.83 36.96 3.62
5029 6424 1.429463 GTCGGTTGCTAGAACCTGTG 58.571 55.000 16.89 6.76 38.15 3.66
5044 6439 4.924305 ACCTGTGCCTGCATTATTAATG 57.076 40.909 11.35 11.35 41.85 1.90
5052 6447 9.027202 TGTGCCTGCATTATTAATGATGAATAT 57.973 29.630 21.00 0.00 41.46 1.28
5053 6448 9.865321 GTGCCTGCATTATTAATGATGAATATT 57.135 29.630 21.00 0.00 41.46 1.28
5125 6520 7.978975 CCTTCTCAAATTTACCTTGTTTTGTGA 59.021 33.333 0.00 0.00 32.74 3.58
5298 6693 1.204704 CAGCGTGATTCTCAGGTACCA 59.795 52.381 15.94 0.00 34.95 3.25
5309 6704 1.064758 TCAGGTACCATGGGATGCAAC 60.065 52.381 18.09 4.04 0.00 4.17
5317 6712 2.289819 CCATGGGATGCAACTTGCTTTT 60.290 45.455 14.78 0.24 45.31 2.27
5357 6752 8.349245 TGCCATTGCATATACTTGTTGTATTAC 58.651 33.333 0.00 0.00 44.23 1.89
5387 6782 9.113838 GAATATTACTGACCAATCACATCAAGT 57.886 33.333 0.00 0.00 0.00 3.16
5432 6827 5.091261 TCTTTGATCTCTCCCTGTAAAGC 57.909 43.478 0.00 0.00 0.00 3.51
5478 6873 1.065491 TCACCCGAAGCATTGCTATGT 60.065 47.619 12.39 4.18 38.25 2.29
5499 6894 5.316167 TGTAATGAGCAAGATTCAAGTGGT 58.684 37.500 0.00 0.00 0.00 4.16
5503 6898 3.745975 TGAGCAAGATTCAAGTGGTAACG 59.254 43.478 0.00 0.00 42.51 3.18
5742 7137 4.187694 GGAGAATACCTCAGTTGCTTCAG 58.812 47.826 0.00 0.00 43.76 3.02
5763 7158 0.685660 ACCCGTTTCTTGTCCCTCTC 59.314 55.000 0.00 0.00 0.00 3.20
5882 7277 0.109086 CTTTGCTCCGAGCTTCGAGA 60.109 55.000 20.87 0.00 43.74 4.04
5898 7293 1.526887 CGAGACGTGATTGCAAAGTGT 59.473 47.619 1.71 0.00 0.00 3.55
5899 7294 2.660094 CGAGACGTGATTGCAAAGTGTG 60.660 50.000 1.71 0.00 0.00 3.82
5926 7321 3.753272 GGATCAAAGCAGTCAAAGCACTA 59.247 43.478 0.00 0.00 0.00 2.74
5927 7322 4.142730 GGATCAAAGCAGTCAAAGCACTAG 60.143 45.833 0.00 0.00 0.00 2.57
5941 7336 2.035449 AGCACTAGAACGTAACACAGCA 59.965 45.455 0.00 0.00 0.00 4.41
5946 7341 3.313012 AGAACGTAACACAGCATAGCA 57.687 42.857 0.00 0.00 0.00 3.49
5948 7343 4.253685 AGAACGTAACACAGCATAGCATT 58.746 39.130 0.00 0.00 0.00 3.56
5970 7365 3.490759 GCATGTCGAGGTGTGGCG 61.491 66.667 0.00 0.00 0.00 5.69
5990 7385 1.354337 CGCATGTTACAGCTCAGCGT 61.354 55.000 0.00 0.00 38.98 5.07
6006 7401 1.448540 CGTGCGCCATCTTCTCCTT 60.449 57.895 4.18 0.00 0.00 3.36
6030 7425 5.106197 TGAGATCAAACATCAATTCCAACGG 60.106 40.000 0.00 0.00 0.00 4.44
6067 7462 2.203337 GGCACTGCAGGTGTTGGA 60.203 61.111 19.93 0.00 46.86 3.53
6143 7539 4.090761 AGTTCAGCACTTCATTGAGGAA 57.909 40.909 2.39 0.00 27.32 3.36
6161 7557 4.191544 AGGAATTCCATGTATGTGTCGTG 58.808 43.478 26.22 0.00 38.89 4.35
6215 7615 5.300792 TCCTCTTCGGCTTATTTTGTTTGTT 59.699 36.000 0.00 0.00 0.00 2.83
6218 7618 5.300792 TCTTCGGCTTATTTTGTTTGTTCCT 59.699 36.000 0.00 0.00 0.00 3.36
6233 7633 4.895668 TGTTCCTAGAACAACCGGTAAT 57.104 40.909 8.00 0.00 0.00 1.89
6321 7726 2.100605 CAGGTGGTGCTTTAGTCTCC 57.899 55.000 0.00 0.00 0.00 3.71
6322 7727 0.984995 AGGTGGTGCTTTAGTCTCCC 59.015 55.000 0.00 0.00 0.00 4.30
6323 7728 0.984995 GGTGGTGCTTTAGTCTCCCT 59.015 55.000 0.00 0.00 0.00 4.20
6390 7802 5.351948 TCTGTATGTAAATAGCACCTGCA 57.648 39.130 0.00 0.00 45.16 4.41
6391 7803 5.116180 TCTGTATGTAAATAGCACCTGCAC 58.884 41.667 0.00 0.00 45.16 4.57
6392 7804 3.868661 TGTATGTAAATAGCACCTGCACG 59.131 43.478 0.00 0.00 45.16 5.34
6408 7820 1.656652 CACGATGATGAGTTGGGGTC 58.343 55.000 0.00 0.00 0.00 4.46
6442 7854 0.312729 GCGTTGTTTTGGTAGTGGGG 59.687 55.000 0.00 0.00 0.00 4.96
6486 7899 4.518970 GTGTTAGGAGGAAGTTGATGCAAA 59.481 41.667 0.00 0.00 0.00 3.68
6508 7921 2.673523 GCCATGGCAGGACTCACT 59.326 61.111 32.08 0.00 41.49 3.41
6509 7922 1.748122 GCCATGGCAGGACTCACTG 60.748 63.158 32.08 0.00 41.49 3.66
6529 7942 6.875726 TCACTGACTGATGTTAGAATTGAAGG 59.124 38.462 0.00 0.00 34.39 3.46
6538 7951 9.905713 TGATGTTAGAATTGAAGGTATTTAGCT 57.094 29.630 0.00 0.00 35.17 3.32
6571 7988 0.465705 CGCAGGAAGCATCTTCCCTA 59.534 55.000 18.94 0.00 46.13 3.53
6579 7996 1.300233 CATCTTCCCTAGCCGCGTC 60.300 63.158 4.92 0.00 0.00 5.19
6593 8010 0.318191 CGCGTCTGATGATGATCCGT 60.318 55.000 0.00 0.00 0.00 4.69
6601 8018 0.179084 ATGATGATCCGTCGGCGTTT 60.179 50.000 9.28 0.00 36.15 3.60
6603 8020 0.804544 GATGATCCGTCGGCGTTTGA 60.805 55.000 9.28 0.00 36.15 2.69
6604 8021 0.806102 ATGATCCGTCGGCGTTTGAG 60.806 55.000 9.28 0.00 36.15 3.02
6605 8022 2.125673 ATCCGTCGGCGTTTGAGG 60.126 61.111 9.28 4.69 36.15 3.86
6607 8024 1.597797 ATCCGTCGGCGTTTGAGGTA 61.598 55.000 9.28 0.00 36.15 3.08
6608 8025 1.153706 CCGTCGGCGTTTGAGGTAT 60.154 57.895 9.28 0.00 36.15 2.73
6665 8093 2.126596 TGCTGGTTGTGGCTTGTGG 61.127 57.895 0.00 0.00 0.00 4.17
6681 8109 1.230324 GTGGGCACAGTTCTCTTGTC 58.770 55.000 0.00 0.00 0.00 3.18
6693 8121 4.284490 AGTTCTCTTGTCTGTGCTCCAATA 59.716 41.667 0.00 0.00 0.00 1.90
6718 8146 7.238486 TGGGTTGATTATTATGTTTTGTGCT 57.762 32.000 0.00 0.00 0.00 4.40
6728 8156 9.636879 TTATTATGTTTTGTGCTAGTACGTACA 57.363 29.630 26.55 12.17 0.00 2.90
6729 8157 5.834239 ATGTTTTGTGCTAGTACGTACAC 57.166 39.130 26.55 16.26 0.00 2.90
6730 8158 3.730215 TGTTTTGTGCTAGTACGTACACG 59.270 43.478 26.55 17.22 46.33 4.49
6731 8159 3.894782 TTTGTGCTAGTACGTACACGA 57.105 42.857 26.55 13.22 43.02 4.35
6741 8171 0.963962 ACGTACACGAGTGAACCCAT 59.036 50.000 10.50 0.00 43.02 4.00
6776 8206 2.093973 AGCACCTTATCGACTGTCCAAG 60.094 50.000 1.55 3.73 0.00 3.61
6781 8211 1.170442 TATCGACTGTCCAAGCACGA 58.830 50.000 1.55 0.00 40.47 4.35
6783 8213 0.317160 TCGACTGTCCAAGCACGATT 59.683 50.000 1.55 0.00 34.59 3.34
6831 8261 3.355626 GAAAGAGTTGGTGCTTTCCAC 57.644 47.619 0.00 0.00 42.45 4.02
6832 8262 2.736670 AAGAGTTGGTGCTTTCCACT 57.263 45.000 0.00 0.00 44.08 4.00
6834 8264 3.018423 AGAGTTGGTGCTTTCCACTTT 57.982 42.857 0.00 0.00 44.08 2.66
6835 8265 2.689983 AGAGTTGGTGCTTTCCACTTTG 59.310 45.455 0.00 0.00 44.08 2.77
6836 8266 1.136891 AGTTGGTGCTTTCCACTTTGC 59.863 47.619 0.00 0.00 44.08 3.68
6837 8267 1.134848 GTTGGTGCTTTCCACTTTGCA 60.135 47.619 0.00 0.00 44.08 4.08
6838 8268 0.746063 TGGTGCTTTCCACTTTGCAG 59.254 50.000 0.00 0.00 44.08 4.41
6839 8269 1.032014 GGTGCTTTCCACTTTGCAGA 58.968 50.000 0.00 0.00 44.08 4.26
6840 8270 1.615392 GGTGCTTTCCACTTTGCAGAT 59.385 47.619 0.00 0.00 44.08 2.90
6841 8271 2.608752 GGTGCTTTCCACTTTGCAGATG 60.609 50.000 0.00 0.00 44.08 2.90
6842 8272 1.000060 TGCTTTCCACTTTGCAGATGC 60.000 47.619 0.00 0.00 42.50 3.91
6843 8273 5.649704 GTGCTTTCCACTTTGCAGATGCA 62.650 47.826 2.75 2.75 44.44 3.96
6869 8299 6.558009 CAGCACATGCATTATCTTTTGTAGT 58.442 36.000 6.64 0.00 45.16 2.73
6870 8300 7.696755 CAGCACATGCATTATCTTTTGTAGTA 58.303 34.615 6.64 0.00 45.16 1.82
6871 8301 8.183536 CAGCACATGCATTATCTTTTGTAGTAA 58.816 33.333 6.64 0.00 45.16 2.24
6872 8302 8.906867 AGCACATGCATTATCTTTTGTAGTAAT 58.093 29.630 6.64 0.00 45.16 1.89
6873 8303 9.173939 GCACATGCATTATCTTTTGTAGTAATC 57.826 33.333 0.00 0.00 41.59 1.75
6874 8304 9.669353 CACATGCATTATCTTTTGTAGTAATCC 57.331 33.333 0.00 0.00 0.00 3.01
6875 8305 9.407380 ACATGCATTATCTTTTGTAGTAATCCA 57.593 29.630 0.00 0.00 0.00 3.41
6896 8326 2.568090 GCAAGGGCACATGAACGG 59.432 61.111 0.00 0.00 40.72 4.44
6898 8328 1.315257 GCAAGGGCACATGAACGGAT 61.315 55.000 0.00 0.00 40.72 4.18
6904 8334 1.949525 GGCACATGAACGGATAATGCT 59.050 47.619 0.00 0.00 0.00 3.79
6908 8338 4.692625 GCACATGAACGGATAATGCTATCT 59.307 41.667 0.00 0.00 35.23 1.98
6917 8347 5.163468 ACGGATAATGCTATCTATGCTCAGG 60.163 44.000 0.00 0.00 35.23 3.86
6918 8348 5.163468 CGGATAATGCTATCTATGCTCAGGT 60.163 44.000 0.00 0.00 35.23 4.00
6919 8349 6.039829 CGGATAATGCTATCTATGCTCAGGTA 59.960 42.308 0.00 0.00 35.23 3.08
6920 8350 7.206687 GGATAATGCTATCTATGCTCAGGTAC 58.793 42.308 0.00 0.00 35.23 3.34
6921 8351 7.147828 GGATAATGCTATCTATGCTCAGGTACA 60.148 40.741 0.00 0.00 35.23 2.90
6922 8352 6.617782 AATGCTATCTATGCTCAGGTACAT 57.382 37.500 0.00 0.00 0.00 2.29
6923 8353 7.724490 AATGCTATCTATGCTCAGGTACATA 57.276 36.000 0.00 0.00 0.00 2.29
6924 8354 6.516739 TGCTATCTATGCTCAGGTACATAC 57.483 41.667 0.00 0.00 0.00 2.39
6925 8355 5.123979 TGCTATCTATGCTCAGGTACATACG 59.876 44.000 0.00 0.00 0.00 3.06
6926 8356 5.124138 GCTATCTATGCTCAGGTACATACGT 59.876 44.000 0.00 0.00 0.00 3.57
6927 8357 5.630661 ATCTATGCTCAGGTACATACGTC 57.369 43.478 0.00 0.00 0.00 4.34
6928 8358 3.819337 TCTATGCTCAGGTACATACGTCC 59.181 47.826 0.00 0.00 0.00 4.79
6929 8359 0.736636 TGCTCAGGTACATACGTCCG 59.263 55.000 0.00 0.00 0.00 4.79
6930 8360 0.594284 GCTCAGGTACATACGTCCGC 60.594 60.000 0.00 0.00 0.00 5.54
6931 8361 1.022735 CTCAGGTACATACGTCCGCT 58.977 55.000 0.00 0.00 0.00 5.52
6932 8362 1.404391 CTCAGGTACATACGTCCGCTT 59.596 52.381 0.00 0.00 0.00 4.68
6933 8363 1.402968 TCAGGTACATACGTCCGCTTC 59.597 52.381 0.00 0.00 0.00 3.86
6934 8364 1.404391 CAGGTACATACGTCCGCTTCT 59.596 52.381 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.511659 TGTCGAGTAGCTTGGTACTGT 58.488 47.619 15.90 0.00 33.18 3.55
159 160 0.464373 CATGTGGTGGGATTCTCCGG 60.464 60.000 0.00 0.00 37.43 5.14
238 239 1.567537 CACACGTAGTTGTTGCCGG 59.432 57.895 0.00 0.00 41.61 6.13
240 241 1.281656 GGCACACGTAGTTGTTGCC 59.718 57.895 0.00 0.00 41.61 4.52
353 355 3.689002 CTCCCGCAGCTTCTTCCCC 62.689 68.421 0.00 0.00 0.00 4.81
517 579 2.487934 GCTCAACTGTTTCTGCTCTGA 58.512 47.619 0.00 0.00 0.00 3.27
518 580 1.534595 GGCTCAACTGTTTCTGCTCTG 59.465 52.381 0.00 0.00 0.00 3.35
519 581 1.544314 GGGCTCAACTGTTTCTGCTCT 60.544 52.381 0.00 0.00 0.00 4.09
585 647 4.487714 TGGGCTTTAATCAGTCAGGTAG 57.512 45.455 0.00 0.00 0.00 3.18
609 671 3.259902 GAAGCCCAGTTTTAGTACTCGG 58.740 50.000 0.00 0.00 30.48 4.63
610 672 2.921754 CGAAGCCCAGTTTTAGTACTCG 59.078 50.000 0.00 0.00 0.00 4.18
612 674 2.614734 GCCGAAGCCCAGTTTTAGTACT 60.615 50.000 0.00 0.00 0.00 2.73
615 677 2.942641 GCCGAAGCCCAGTTTTAGT 58.057 52.632 0.00 0.00 0.00 2.24
778 845 2.107141 GAGCGAATCGGAGGGGTG 59.893 66.667 4.35 0.00 0.00 4.61
779 846 3.155167 GGAGCGAATCGGAGGGGT 61.155 66.667 4.35 0.00 0.00 4.95
780 847 4.286320 CGGAGCGAATCGGAGGGG 62.286 72.222 4.35 0.00 0.00 4.79
786 853 4.951963 GGGAGCCGGAGCGAATCG 62.952 72.222 5.05 0.00 46.67 3.34
847 914 2.588034 GGATTCCCGGCGCTGTAC 60.588 66.667 16.49 0.00 0.00 2.90
859 926 4.951963 CTCGGAGCCGGCGGATTC 62.952 72.222 33.44 23.87 40.25 2.52
1203 1717 2.283173 TGGCTGAGCTCACCGAGA 60.283 61.111 13.74 1.33 0.00 4.04
1228 1742 2.747855 AGCAGCAACGCTTAGGCC 60.748 61.111 0.00 0.00 39.99 5.19
1234 1748 0.250234 TAGATGGAAGCAGCAACGCT 59.750 50.000 0.00 0.00 46.67 5.07
1235 1749 0.654683 CTAGATGGAAGCAGCAACGC 59.345 55.000 0.00 0.00 0.00 4.84
1236 1750 1.293924 CCTAGATGGAAGCAGCAACG 58.706 55.000 0.00 0.00 38.35 4.10
1238 1752 1.289160 ACCCTAGATGGAAGCAGCAA 58.711 50.000 0.00 0.00 38.35 3.91
1240 1754 3.406764 CATAACCCTAGATGGAAGCAGC 58.593 50.000 0.00 0.00 38.35 5.25
1241 1755 3.181451 TGCATAACCCTAGATGGAAGCAG 60.181 47.826 0.00 0.00 38.35 4.24
1271 2140 2.270275 TTTGCAGGTGACAAACGTTG 57.730 45.000 0.00 0.00 32.27 4.10
1277 2146 1.606668 GGTTCGATTTGCAGGTGACAA 59.393 47.619 0.00 0.00 0.00 3.18
1284 2153 4.675114 GTGTTAACTTGGTTCGATTTGCAG 59.325 41.667 7.22 0.00 0.00 4.41
1333 2202 3.584848 AGTCAGGATCTACTTGCAGGTTT 59.415 43.478 6.84 0.00 0.00 3.27
1471 2341 7.204604 TCGGATAACAAACAATATCTCGCTTA 58.795 34.615 0.00 0.00 0.00 3.09
1497 2696 7.054124 TGAGAGGAAATGTGATATTACAACCC 58.946 38.462 4.23 6.36 33.69 4.11
1504 2703 6.421485 AGCAACTGAGAGGAAATGTGATATT 58.579 36.000 0.00 0.00 0.00 1.28
1982 3209 4.915085 CGCATTTTAGACAAATTCGGTTGT 59.085 37.500 0.54 0.54 44.38 3.32
2119 3349 1.836802 AGCCATTCCTCCAGAACTCTC 59.163 52.381 0.00 0.00 37.29 3.20
2338 3568 4.084013 CGACTTATTCCTGTCCACAAACAC 60.084 45.833 0.00 0.00 0.00 3.32
2707 3937 3.947868 ACTTGACATCCATCTCAACTGG 58.052 45.455 0.00 0.00 34.93 4.00
2759 3989 7.606858 TGATTCTGATTACAAGCTTCTTCAG 57.393 36.000 14.10 14.10 33.55 3.02
3595 4826 2.072298 CAGAGGGAACAAGAAGCTTCG 58.928 52.381 20.43 10.11 0.00 3.79
3643 4874 3.219281 TCACCTGAAGGGCAAAAGTTAC 58.781 45.455 0.56 0.00 40.27 2.50
3666 4897 6.442112 TCAAACGACATGATTTTGTTATGCA 58.558 32.000 0.00 0.00 32.96 3.96
3714 4945 0.261696 AACCCCTGGCAGTGAAGTTT 59.738 50.000 14.43 0.00 0.00 2.66
3717 4948 2.094675 CATTAACCCCTGGCAGTGAAG 58.905 52.381 14.43 1.29 0.00 3.02
3718 4949 1.427368 ACATTAACCCCTGGCAGTGAA 59.573 47.619 14.43 0.00 0.00 3.18
3720 4951 1.818674 GAACATTAACCCCTGGCAGTG 59.181 52.381 14.43 0.86 0.00 3.66
3721 4952 1.427368 TGAACATTAACCCCTGGCAGT 59.573 47.619 14.43 0.00 0.00 4.40
3723 4954 1.884497 CGTGAACATTAACCCCTGGCA 60.884 52.381 0.00 0.00 0.00 4.92
3724 4955 0.808755 CGTGAACATTAACCCCTGGC 59.191 55.000 0.00 0.00 0.00 4.85
3725 4956 0.808755 GCGTGAACATTAACCCCTGG 59.191 55.000 0.00 0.00 0.00 4.45
3728 4959 2.752903 AGAATGCGTGAACATTAACCCC 59.247 45.455 0.00 0.00 40.31 4.95
3729 4960 5.751243 ATAGAATGCGTGAACATTAACCC 57.249 39.130 0.00 0.00 40.31 4.11
3739 4970 9.678941 CTCTGTAAACTAATATAGAATGCGTGA 57.321 33.333 0.00 0.00 0.00 4.35
3741 4972 8.088981 CCCTCTGTAAACTAATATAGAATGCGT 58.911 37.037 0.00 0.00 0.00 5.24
3742 4973 8.304596 TCCCTCTGTAAACTAATATAGAATGCG 58.695 37.037 0.00 0.00 0.00 4.73
4118 5508 7.120923 GGTATCCACCTACATTCTAGTTCAA 57.879 40.000 0.00 0.00 42.11 2.69
4188 5578 2.610374 TCACCGAGTAAACTGCAACAAC 59.390 45.455 0.00 0.00 0.00 3.32
4192 5582 2.215196 GGTTCACCGAGTAAACTGCAA 58.785 47.619 0.00 0.00 0.00 4.08
4195 5585 4.755123 AGATTTGGTTCACCGAGTAAACTG 59.245 41.667 0.00 0.00 39.43 3.16
4200 5590 4.345859 ACAAGATTTGGTTCACCGAGTA 57.654 40.909 0.00 0.00 39.43 2.59
4294 5684 3.320541 TGGAAAATTGTGTAGCAGTTGGG 59.679 43.478 0.00 0.00 0.00 4.12
4356 5747 7.986085 AAAGCACAGTAACTCAATAGAATGT 57.014 32.000 0.00 0.00 0.00 2.71
4463 5854 6.954684 GGGAAGGAGGAAGTATATCATAGTCA 59.045 42.308 0.00 0.00 0.00 3.41
4476 5867 6.418946 GCCTAATAATATGGGAAGGAGGAAG 58.581 44.000 0.00 0.00 0.00 3.46
4478 5869 4.469945 CGCCTAATAATATGGGAAGGAGGA 59.530 45.833 0.00 0.00 0.00 3.71
4480 5871 5.422214 ACGCCTAATAATATGGGAAGGAG 57.578 43.478 0.00 0.00 0.00 3.69
4482 5873 8.483758 ACTAATACGCCTAATAATATGGGAAGG 58.516 37.037 0.00 0.00 0.00 3.46
4491 5882 9.512435 CGTGCTAATACTAATACGCCTAATAAT 57.488 33.333 0.00 0.00 0.00 1.28
4492 5883 8.729756 TCGTGCTAATACTAATACGCCTAATAA 58.270 33.333 0.00 0.00 0.00 1.40
4493 5884 8.267620 TCGTGCTAATACTAATACGCCTAATA 57.732 34.615 0.00 0.00 0.00 0.98
4494 5885 7.149569 TCGTGCTAATACTAATACGCCTAAT 57.850 36.000 0.00 0.00 0.00 1.73
4495 5886 6.558771 TCGTGCTAATACTAATACGCCTAA 57.441 37.500 0.00 0.00 0.00 2.69
4496 5887 6.427853 TCTTCGTGCTAATACTAATACGCCTA 59.572 38.462 0.00 0.00 0.00 3.93
4497 5888 5.240183 TCTTCGTGCTAATACTAATACGCCT 59.760 40.000 0.00 0.00 0.00 5.52
4498 5889 5.455392 TCTTCGTGCTAATACTAATACGCC 58.545 41.667 0.00 0.00 0.00 5.68
4499 5890 7.564044 AATCTTCGTGCTAATACTAATACGC 57.436 36.000 0.00 0.00 0.00 4.42
4500 5891 8.786955 GCTAATCTTCGTGCTAATACTAATACG 58.213 37.037 0.00 0.00 0.00 3.06
4501 5892 8.786955 CGCTAATCTTCGTGCTAATACTAATAC 58.213 37.037 0.00 0.00 0.00 1.89
4502 5893 7.484007 GCGCTAATCTTCGTGCTAATACTAATA 59.516 37.037 0.00 0.00 34.05 0.98
4503 5894 6.308282 GCGCTAATCTTCGTGCTAATACTAAT 59.692 38.462 0.00 0.00 34.05 1.73
4504 5895 5.628193 GCGCTAATCTTCGTGCTAATACTAA 59.372 40.000 0.00 0.00 34.05 2.24
4505 5896 5.152097 GCGCTAATCTTCGTGCTAATACTA 58.848 41.667 0.00 0.00 34.05 1.82
4506 5897 3.982058 GCGCTAATCTTCGTGCTAATACT 59.018 43.478 0.00 0.00 34.05 2.12
4507 5898 3.734231 TGCGCTAATCTTCGTGCTAATAC 59.266 43.478 9.73 0.00 37.53 1.89
4508 5899 3.734231 GTGCGCTAATCTTCGTGCTAATA 59.266 43.478 9.73 0.00 37.53 0.98
4509 5900 2.540101 GTGCGCTAATCTTCGTGCTAAT 59.460 45.455 9.73 0.00 37.53 1.73
4510 5901 1.924524 GTGCGCTAATCTTCGTGCTAA 59.075 47.619 9.73 0.00 37.53 3.09
4511 5902 1.556564 GTGCGCTAATCTTCGTGCTA 58.443 50.000 9.73 0.00 37.53 3.49
4512 5903 1.084370 GGTGCGCTAATCTTCGTGCT 61.084 55.000 9.73 0.00 37.53 4.40
4513 5904 1.348594 GGTGCGCTAATCTTCGTGC 59.651 57.895 9.73 0.00 37.18 5.34
4514 5905 1.075542 TTGGTGCGCTAATCTTCGTG 58.924 50.000 9.73 0.00 0.00 4.35
4515 5906 2.024176 ATTGGTGCGCTAATCTTCGT 57.976 45.000 9.73 0.00 0.00 3.85
4516 5907 4.530094 TTAATTGGTGCGCTAATCTTCG 57.470 40.909 9.73 0.00 0.00 3.79
4517 5908 5.140177 CGATTAATTGGTGCGCTAATCTTC 58.860 41.667 9.73 6.27 31.44 2.87
4518 5909 4.554723 GCGATTAATTGGTGCGCTAATCTT 60.555 41.667 9.73 0.00 43.85 2.40
4519 5910 3.058914 GCGATTAATTGGTGCGCTAATCT 60.059 43.478 9.73 3.32 43.85 2.40
4520 5911 3.226347 GCGATTAATTGGTGCGCTAATC 58.774 45.455 9.73 11.48 43.85 1.75
4521 5912 3.268013 GCGATTAATTGGTGCGCTAAT 57.732 42.857 9.73 2.61 43.85 1.73
4522 5913 2.748461 GCGATTAATTGGTGCGCTAA 57.252 45.000 9.73 0.00 43.85 3.09
4526 5917 3.308595 TCAACTAGCGATTAATTGGTGCG 59.691 43.478 16.18 10.05 0.00 5.34
4527 5918 4.875544 TCAACTAGCGATTAATTGGTGC 57.124 40.909 16.18 6.30 0.00 5.01
4528 5919 5.123186 TGGTTCAACTAGCGATTAATTGGTG 59.877 40.000 16.18 9.37 0.00 4.17
4529 5920 5.250200 TGGTTCAACTAGCGATTAATTGGT 58.750 37.500 11.97 11.97 0.00 3.67
4530 5921 5.811399 TGGTTCAACTAGCGATTAATTGG 57.189 39.130 4.84 0.00 0.00 3.16
4531 5922 6.129393 CGATGGTTCAACTAGCGATTAATTG 58.871 40.000 5.51 0.00 40.95 2.32
4532 5923 5.815740 ACGATGGTTCAACTAGCGATTAATT 59.184 36.000 18.98 0.00 40.95 1.40
4533 5924 5.357257 ACGATGGTTCAACTAGCGATTAAT 58.643 37.500 18.98 0.00 40.95 1.40
4534 5925 4.751060 ACGATGGTTCAACTAGCGATTAA 58.249 39.130 18.98 0.00 40.95 1.40
4535 5926 4.380841 ACGATGGTTCAACTAGCGATTA 57.619 40.909 18.98 0.00 40.95 1.75
4536 5927 3.247006 ACGATGGTTCAACTAGCGATT 57.753 42.857 18.98 0.00 40.95 3.34
4537 5928 2.961526 ACGATGGTTCAACTAGCGAT 57.038 45.000 18.98 0.00 40.95 4.58
4538 5929 3.011818 TCTACGATGGTTCAACTAGCGA 58.988 45.455 18.98 1.32 40.95 4.93
4539 5930 3.364062 CTCTACGATGGTTCAACTAGCG 58.636 50.000 10.25 10.25 44.01 4.26
4540 5931 3.491104 CCCTCTACGATGGTTCAACTAGC 60.491 52.174 0.00 0.00 0.00 3.42
4541 5932 3.952323 TCCCTCTACGATGGTTCAACTAG 59.048 47.826 0.00 0.00 0.00 2.57
4542 5933 3.952323 CTCCCTCTACGATGGTTCAACTA 59.048 47.826 0.00 0.00 0.00 2.24
4543 5934 2.761208 CTCCCTCTACGATGGTTCAACT 59.239 50.000 0.00 0.00 0.00 3.16
4544 5935 2.159085 CCTCCCTCTACGATGGTTCAAC 60.159 54.545 0.00 0.00 0.00 3.18
4545 5936 2.108168 CCTCCCTCTACGATGGTTCAA 58.892 52.381 0.00 0.00 0.00 2.69
4546 5937 1.776662 CCTCCCTCTACGATGGTTCA 58.223 55.000 0.00 0.00 0.00 3.18
4547 5938 0.389757 GCCTCCCTCTACGATGGTTC 59.610 60.000 0.00 0.00 0.00 3.62
4548 5939 0.325296 TGCCTCCCTCTACGATGGTT 60.325 55.000 0.00 0.00 0.00 3.67
4549 5940 0.325296 TTGCCTCCCTCTACGATGGT 60.325 55.000 0.00 0.00 0.00 3.55
4550 5941 1.001406 GATTGCCTCCCTCTACGATGG 59.999 57.143 0.00 0.00 0.00 3.51
4551 5942 1.688735 TGATTGCCTCCCTCTACGATG 59.311 52.381 0.00 0.00 0.00 3.84
4552 5943 1.689273 GTGATTGCCTCCCTCTACGAT 59.311 52.381 0.00 0.00 0.00 3.73
4553 5944 1.112113 GTGATTGCCTCCCTCTACGA 58.888 55.000 0.00 0.00 0.00 3.43
4554 5945 0.249073 CGTGATTGCCTCCCTCTACG 60.249 60.000 0.00 0.00 0.00 3.51
4555 5946 0.105039 CCGTGATTGCCTCCCTCTAC 59.895 60.000 0.00 0.00 0.00 2.59
4556 5947 1.686325 GCCGTGATTGCCTCCCTCTA 61.686 60.000 0.00 0.00 0.00 2.43
4557 5948 3.036429 GCCGTGATTGCCTCCCTCT 62.036 63.158 0.00 0.00 0.00 3.69
4558 5949 2.514824 GCCGTGATTGCCTCCCTC 60.515 66.667 0.00 0.00 0.00 4.30
4559 5950 3.011517 AGCCGTGATTGCCTCCCT 61.012 61.111 0.00 0.00 0.00 4.20
4560 5951 2.514824 GAGCCGTGATTGCCTCCC 60.515 66.667 0.00 0.00 0.00 4.30
4561 5952 1.817099 CTGAGCCGTGATTGCCTCC 60.817 63.158 0.00 0.00 0.00 4.30
4562 5953 1.817099 CCTGAGCCGTGATTGCCTC 60.817 63.158 0.00 0.00 0.00 4.70
4563 5954 1.841302 TTCCTGAGCCGTGATTGCCT 61.841 55.000 0.00 0.00 0.00 4.75
4564 5955 0.960364 TTTCCTGAGCCGTGATTGCC 60.960 55.000 0.00 0.00 0.00 4.52
4565 5956 0.881118 TTTTCCTGAGCCGTGATTGC 59.119 50.000 0.00 0.00 0.00 3.56
4582 5973 2.353011 CGTGCATGCATCCTTCCTTTTT 60.353 45.455 25.64 0.00 0.00 1.94
4583 5974 1.203052 CGTGCATGCATCCTTCCTTTT 59.797 47.619 25.64 0.00 0.00 2.27
4584 5975 0.813184 CGTGCATGCATCCTTCCTTT 59.187 50.000 25.64 0.00 0.00 3.11
4585 5976 0.035152 TCGTGCATGCATCCTTCCTT 60.035 50.000 25.64 0.00 0.00 3.36
4586 5977 0.182061 ATCGTGCATGCATCCTTCCT 59.818 50.000 25.64 1.89 0.00 3.36
4587 5978 0.590195 GATCGTGCATGCATCCTTCC 59.410 55.000 25.64 8.75 0.00 3.46
4588 5979 1.530293 GAGATCGTGCATGCATCCTTC 59.470 52.381 25.64 17.46 0.00 3.46
4589 5980 1.140452 AGAGATCGTGCATGCATCCTT 59.860 47.619 25.64 9.38 0.00 3.36
4590 5981 0.757512 AGAGATCGTGCATGCATCCT 59.242 50.000 25.64 17.39 0.00 3.24
4591 5982 1.590932 AAGAGATCGTGCATGCATCC 58.409 50.000 25.64 11.18 0.00 3.51
4592 5983 3.064408 TCAAAAGAGATCGTGCATGCATC 59.936 43.478 25.64 17.54 0.00 3.91
4593 5984 3.011818 TCAAAAGAGATCGTGCATGCAT 58.988 40.909 25.64 8.04 0.00 3.96
4594 5985 2.160219 GTCAAAAGAGATCGTGCATGCA 59.840 45.455 18.46 18.46 0.00 3.96
4595 5986 2.417933 AGTCAAAAGAGATCGTGCATGC 59.582 45.455 11.82 11.82 0.00 4.06
4596 5987 4.033358 GGTAGTCAAAAGAGATCGTGCATG 59.967 45.833 0.00 0.00 0.00 4.06
4597 5988 4.081420 AGGTAGTCAAAAGAGATCGTGCAT 60.081 41.667 0.00 0.00 0.00 3.96
4598 5989 3.258372 AGGTAGTCAAAAGAGATCGTGCA 59.742 43.478 0.00 0.00 0.00 4.57
4599 5990 3.851098 AGGTAGTCAAAAGAGATCGTGC 58.149 45.455 0.00 0.00 0.00 5.34
4600 5991 4.082190 TGGAGGTAGTCAAAAGAGATCGTG 60.082 45.833 0.00 0.00 0.00 4.35
4601 5992 4.087182 TGGAGGTAGTCAAAAGAGATCGT 58.913 43.478 0.00 0.00 0.00 3.73
4602 5993 4.720649 TGGAGGTAGTCAAAAGAGATCG 57.279 45.455 0.00 0.00 0.00 3.69
4603 5994 6.227298 TCATGGAGGTAGTCAAAAGAGATC 57.773 41.667 0.00 0.00 0.00 2.75
4604 5995 6.627087 TTCATGGAGGTAGTCAAAAGAGAT 57.373 37.500 0.00 0.00 0.00 2.75
4605 5996 6.433847 TTTCATGGAGGTAGTCAAAAGAGA 57.566 37.500 0.00 0.00 0.00 3.10
4606 5997 7.693969 AATTTCATGGAGGTAGTCAAAAGAG 57.306 36.000 0.00 0.00 0.00 2.85
4607 5998 7.336931 GCTAATTTCATGGAGGTAGTCAAAAGA 59.663 37.037 0.00 0.00 0.00 2.52
4608 5999 7.475840 GCTAATTTCATGGAGGTAGTCAAAAG 58.524 38.462 0.00 0.00 0.00 2.27
4609 6000 6.093495 CGCTAATTTCATGGAGGTAGTCAAAA 59.907 38.462 0.00 0.00 0.00 2.44
4610 6001 5.584649 CGCTAATTTCATGGAGGTAGTCAAA 59.415 40.000 0.00 0.00 0.00 2.69
4611 6002 5.105106 TCGCTAATTTCATGGAGGTAGTCAA 60.105 40.000 0.00 0.00 0.00 3.18
4612 6003 4.404394 TCGCTAATTTCATGGAGGTAGTCA 59.596 41.667 0.00 0.00 0.00 3.41
4613 6004 4.945246 TCGCTAATTTCATGGAGGTAGTC 58.055 43.478 0.00 0.00 0.00 2.59
4614 6005 5.511545 GGATCGCTAATTTCATGGAGGTAGT 60.512 44.000 0.00 0.00 0.00 2.73
4615 6006 4.932200 GGATCGCTAATTTCATGGAGGTAG 59.068 45.833 0.00 0.00 0.00 3.18
4616 6007 4.593206 AGGATCGCTAATTTCATGGAGGTA 59.407 41.667 0.00 0.00 0.00 3.08
4617 6008 3.392616 AGGATCGCTAATTTCATGGAGGT 59.607 43.478 0.00 0.00 0.00 3.85
4618 6009 3.999663 GAGGATCGCTAATTTCATGGAGG 59.000 47.826 0.00 0.00 0.00 4.30
4619 6010 4.635223 TGAGGATCGCTAATTTCATGGAG 58.365 43.478 0.00 0.00 38.61 3.86
4620 6011 4.687901 TGAGGATCGCTAATTTCATGGA 57.312 40.909 0.00 0.00 38.61 3.41
4621 6012 5.954296 ATTGAGGATCGCTAATTTCATGG 57.046 39.130 0.00 0.00 38.61 3.66
4622 6013 8.092521 AGTTATTGAGGATCGCTAATTTCATG 57.907 34.615 0.00 0.00 38.61 3.07
4623 6014 9.209175 GTAGTTATTGAGGATCGCTAATTTCAT 57.791 33.333 0.00 0.00 38.61 2.57
4624 6015 8.421784 AGTAGTTATTGAGGATCGCTAATTTCA 58.578 33.333 0.00 0.00 38.61 2.69
4625 6016 8.819643 AGTAGTTATTGAGGATCGCTAATTTC 57.180 34.615 0.00 0.00 38.61 2.17
4626 6017 8.421784 TGAGTAGTTATTGAGGATCGCTAATTT 58.578 33.333 0.00 0.00 38.61 1.82
4627 6018 7.952671 TGAGTAGTTATTGAGGATCGCTAATT 58.047 34.615 0.00 0.00 38.61 1.40
4628 6019 7.526142 TGAGTAGTTATTGAGGATCGCTAAT 57.474 36.000 0.00 0.00 38.61 1.73
4629 6020 6.954487 TGAGTAGTTATTGAGGATCGCTAA 57.046 37.500 0.00 0.00 38.61 3.09
4630 6021 6.771267 TCTTGAGTAGTTATTGAGGATCGCTA 59.229 38.462 0.00 0.00 38.61 4.26
4631 6022 5.594725 TCTTGAGTAGTTATTGAGGATCGCT 59.405 40.000 0.00 0.00 38.61 4.93
4632 6023 5.833082 TCTTGAGTAGTTATTGAGGATCGC 58.167 41.667 0.00 0.00 38.61 4.58
4633 6024 7.265647 TCTCTTGAGTAGTTATTGAGGATCG 57.734 40.000 0.00 0.00 38.61 3.69
4634 6025 7.504238 TCCTCTCTTGAGTAGTTATTGAGGATC 59.496 40.741 0.00 0.00 41.49 3.36
4635 6026 7.358263 TCCTCTCTTGAGTAGTTATTGAGGAT 58.642 38.462 0.00 0.00 41.49 3.24
4636 6027 6.732487 TCCTCTCTTGAGTAGTTATTGAGGA 58.268 40.000 0.00 0.00 43.33 3.71
4637 6028 6.831353 TCTCCTCTCTTGAGTAGTTATTGAGG 59.169 42.308 0.00 0.00 38.61 3.86
4638 6029 7.873719 TCTCCTCTCTTGAGTAGTTATTGAG 57.126 40.000 0.00 0.00 38.61 3.02
4639 6030 8.830915 AATCTCCTCTCTTGAGTAGTTATTGA 57.169 34.615 0.00 0.00 38.61 2.57
4641 6032 8.856103 GCTAATCTCCTCTCTTGAGTAGTTATT 58.144 37.037 0.00 0.00 38.61 1.40
4642 6033 8.224720 AGCTAATCTCCTCTCTTGAGTAGTTAT 58.775 37.037 0.00 0.00 38.61 1.89
4643 6034 7.500892 CAGCTAATCTCCTCTCTTGAGTAGTTA 59.499 40.741 0.00 0.00 38.61 2.24
4644 6035 6.321181 CAGCTAATCTCCTCTCTTGAGTAGTT 59.679 42.308 0.00 0.00 38.61 2.24
4645 6036 5.827797 CAGCTAATCTCCTCTCTTGAGTAGT 59.172 44.000 0.00 0.00 38.61 2.73
4646 6037 5.278463 GCAGCTAATCTCCTCTCTTGAGTAG 60.278 48.000 0.00 0.00 38.61 2.57
4647 6038 4.582656 GCAGCTAATCTCCTCTCTTGAGTA 59.417 45.833 0.00 0.00 38.61 2.59
4648 6039 3.384467 GCAGCTAATCTCCTCTCTTGAGT 59.616 47.826 0.00 0.00 38.61 3.41
4649 6040 3.384146 TGCAGCTAATCTCCTCTCTTGAG 59.616 47.826 0.00 0.00 39.92 3.02
4650 6041 3.369175 TGCAGCTAATCTCCTCTCTTGA 58.631 45.455 0.00 0.00 0.00 3.02
4651 6042 3.815856 TGCAGCTAATCTCCTCTCTTG 57.184 47.619 0.00 0.00 0.00 3.02
4652 6043 5.124645 CAAATGCAGCTAATCTCCTCTCTT 58.875 41.667 0.00 0.00 0.00 2.85
4653 6044 4.706035 CAAATGCAGCTAATCTCCTCTCT 58.294 43.478 0.00 0.00 0.00 3.10
4654 6045 3.250521 GCAAATGCAGCTAATCTCCTCTC 59.749 47.826 0.00 0.00 41.59 3.20
4655 6046 3.212685 GCAAATGCAGCTAATCTCCTCT 58.787 45.455 0.00 0.00 41.59 3.69
4656 6047 2.292845 GGCAAATGCAGCTAATCTCCTC 59.707 50.000 7.80 0.00 44.36 3.71
4657 6048 2.091994 AGGCAAATGCAGCTAATCTCCT 60.092 45.455 7.80 0.00 44.36 3.69
4658 6049 2.305009 AGGCAAATGCAGCTAATCTCC 58.695 47.619 7.80 0.00 44.36 3.71
4659 6050 3.703420 CAAGGCAAATGCAGCTAATCTC 58.297 45.455 7.80 0.00 44.36 2.75
4660 6051 2.159142 GCAAGGCAAATGCAGCTAATCT 60.159 45.455 7.80 0.00 43.29 2.40
4661 6052 2.199236 GCAAGGCAAATGCAGCTAATC 58.801 47.619 7.80 0.00 43.29 1.75
4662 6053 2.304751 GCAAGGCAAATGCAGCTAAT 57.695 45.000 7.80 0.00 43.29 1.73
4663 6054 3.818586 GCAAGGCAAATGCAGCTAA 57.181 47.368 7.80 0.00 43.29 3.09
4669 6060 2.158928 TCCCAATATGCAAGGCAAATGC 60.159 45.455 0.00 0.00 43.62 3.56
4670 6061 3.823281 TCCCAATATGCAAGGCAAATG 57.177 42.857 0.00 0.00 43.62 2.32
4671 6062 4.710324 CAATCCCAATATGCAAGGCAAAT 58.290 39.130 0.00 0.00 43.62 2.32
4672 6063 3.682155 GCAATCCCAATATGCAAGGCAAA 60.682 43.478 0.00 0.00 43.62 3.68
4673 6064 2.158928 GCAATCCCAATATGCAAGGCAA 60.159 45.455 0.00 0.00 43.62 4.52
4674 6065 1.413445 GCAATCCCAATATGCAAGGCA 59.587 47.619 0.00 0.00 44.86 4.75
4675 6066 1.413445 TGCAATCCCAATATGCAAGGC 59.587 47.619 0.00 0.00 46.23 4.35
4680 6071 6.228258 AGATTTTCATGCAATCCCAATATGC 58.772 36.000 11.75 0.00 40.45 3.14
4681 6072 9.938280 ATTAGATTTTCATGCAATCCCAATATG 57.062 29.630 11.75 0.00 31.86 1.78
4682 6073 9.938280 CATTAGATTTTCATGCAATCCCAATAT 57.062 29.630 11.75 0.00 31.86 1.28
4683 6074 7.874016 GCATTAGATTTTCATGCAATCCCAATA 59.126 33.333 11.75 0.00 42.49 1.90
4684 6075 6.708949 GCATTAGATTTTCATGCAATCCCAAT 59.291 34.615 11.75 9.66 42.49 3.16
4685 6076 6.050432 GCATTAGATTTTCATGCAATCCCAA 58.950 36.000 11.75 8.30 42.49 4.12
4686 6077 5.603596 GCATTAGATTTTCATGCAATCCCA 58.396 37.500 11.75 2.81 42.49 4.37
4687 6078 4.682860 CGCATTAGATTTTCATGCAATCCC 59.317 41.667 11.75 0.00 43.00 3.85
4688 6079 4.149396 GCGCATTAGATTTTCATGCAATCC 59.851 41.667 0.30 0.03 43.00 3.01
4689 6080 4.149396 GGCGCATTAGATTTTCATGCAATC 59.851 41.667 10.83 8.65 43.00 2.67
4690 6081 4.053295 GGCGCATTAGATTTTCATGCAAT 58.947 39.130 10.83 0.00 43.00 3.56
4691 6082 3.130869 AGGCGCATTAGATTTTCATGCAA 59.869 39.130 10.83 0.00 43.00 4.08
4692 6083 2.689471 AGGCGCATTAGATTTTCATGCA 59.311 40.909 10.83 0.00 43.00 3.96
4693 6084 3.360249 AGGCGCATTAGATTTTCATGC 57.640 42.857 10.83 0.00 40.03 4.06
4694 6085 5.820131 TGTTAGGCGCATTAGATTTTCATG 58.180 37.500 10.83 0.00 0.00 3.07
4695 6086 6.449635 TTGTTAGGCGCATTAGATTTTCAT 57.550 33.333 10.83 0.00 0.00 2.57
4696 6087 5.888691 TTGTTAGGCGCATTAGATTTTCA 57.111 34.783 10.83 0.00 0.00 2.69
4697 6088 7.254084 CCAATTTGTTAGGCGCATTAGATTTTC 60.254 37.037 10.83 0.00 0.00 2.29
4698 6089 6.534793 CCAATTTGTTAGGCGCATTAGATTTT 59.465 34.615 10.83 0.00 0.00 1.82
4699 6090 6.042143 CCAATTTGTTAGGCGCATTAGATTT 58.958 36.000 10.83 0.00 0.00 2.17
4700 6091 5.451798 CCCAATTTGTTAGGCGCATTAGATT 60.452 40.000 10.83 0.00 0.00 2.40
4701 6092 4.037923 CCCAATTTGTTAGGCGCATTAGAT 59.962 41.667 10.83 0.00 0.00 1.98
4702 6093 3.380004 CCCAATTTGTTAGGCGCATTAGA 59.620 43.478 10.83 0.00 0.00 2.10
4703 6094 3.380004 TCCCAATTTGTTAGGCGCATTAG 59.620 43.478 10.83 0.00 0.00 1.73
4704 6095 3.357203 TCCCAATTTGTTAGGCGCATTA 58.643 40.909 10.83 0.00 0.00 1.90
4705 6096 2.175202 TCCCAATTTGTTAGGCGCATT 58.825 42.857 10.83 0.00 0.00 3.56
4706 6097 1.846007 TCCCAATTTGTTAGGCGCAT 58.154 45.000 10.83 3.98 0.00 4.73
4707 6098 1.543802 CTTCCCAATTTGTTAGGCGCA 59.456 47.619 10.83 0.00 0.00 6.09
4708 6099 1.135112 CCTTCCCAATTTGTTAGGCGC 60.135 52.381 0.00 0.00 0.00 6.53
4709 6100 2.423538 CTCCTTCCCAATTTGTTAGGCG 59.576 50.000 0.00 0.00 0.00 5.52
4710 6101 2.760650 CCTCCTTCCCAATTTGTTAGGC 59.239 50.000 0.00 0.00 0.00 3.93
4711 6102 3.011257 TCCCTCCTTCCCAATTTGTTAGG 59.989 47.826 0.00 0.00 0.00 2.69
4712 6103 4.263949 ACTCCCTCCTTCCCAATTTGTTAG 60.264 45.833 0.00 0.00 0.00 2.34
4713 6104 3.660669 ACTCCCTCCTTCCCAATTTGTTA 59.339 43.478 0.00 0.00 0.00 2.41
4714 6105 2.450886 ACTCCCTCCTTCCCAATTTGTT 59.549 45.455 0.00 0.00 0.00 2.83
4715 6106 2.073776 ACTCCCTCCTTCCCAATTTGT 58.926 47.619 0.00 0.00 0.00 2.83
4716 6107 2.907458 ACTCCCTCCTTCCCAATTTG 57.093 50.000 0.00 0.00 0.00 2.32
4717 6108 4.871822 CAATACTCCCTCCTTCCCAATTT 58.128 43.478 0.00 0.00 0.00 1.82
4718 6109 3.373110 GCAATACTCCCTCCTTCCCAATT 60.373 47.826 0.00 0.00 0.00 2.32
4719 6110 2.175715 GCAATACTCCCTCCTTCCCAAT 59.824 50.000 0.00 0.00 0.00 3.16
4720 6111 1.564348 GCAATACTCCCTCCTTCCCAA 59.436 52.381 0.00 0.00 0.00 4.12
4721 6112 1.213296 GCAATACTCCCTCCTTCCCA 58.787 55.000 0.00 0.00 0.00 4.37
4722 6113 0.106894 CGCAATACTCCCTCCTTCCC 59.893 60.000 0.00 0.00 0.00 3.97
4723 6114 0.831307 ACGCAATACTCCCTCCTTCC 59.169 55.000 0.00 0.00 0.00 3.46
4724 6115 3.814005 TTACGCAATACTCCCTCCTTC 57.186 47.619 0.00 0.00 0.00 3.46
4725 6116 6.231211 CAATATTACGCAATACTCCCTCCTT 58.769 40.000 0.00 0.00 29.44 3.36
4726 6117 5.280011 CCAATATTACGCAATACTCCCTCCT 60.280 44.000 0.00 0.00 29.44 3.69
4727 6118 4.935808 CCAATATTACGCAATACTCCCTCC 59.064 45.833 0.00 0.00 29.44 4.30
4728 6119 4.392138 GCCAATATTACGCAATACTCCCTC 59.608 45.833 0.00 0.00 29.44 4.30
4729 6120 4.202419 TGCCAATATTACGCAATACTCCCT 60.202 41.667 6.87 0.00 29.44 4.20
4730 6121 4.069304 TGCCAATATTACGCAATACTCCC 58.931 43.478 6.87 0.00 29.44 4.30
4731 6122 5.181245 ACATGCCAATATTACGCAATACTCC 59.819 40.000 12.05 0.00 35.85 3.85
4732 6123 6.079763 CACATGCCAATATTACGCAATACTC 58.920 40.000 12.05 0.00 35.85 2.59
4733 6124 5.562696 GCACATGCCAATATTACGCAATACT 60.563 40.000 12.05 0.00 35.85 2.12
4734 6125 4.616802 GCACATGCCAATATTACGCAATAC 59.383 41.667 12.05 1.88 35.85 1.89
4735 6126 4.276926 TGCACATGCCAATATTACGCAATA 59.723 37.500 12.05 0.00 41.18 1.90
4736 6127 3.067883 TGCACATGCCAATATTACGCAAT 59.932 39.130 12.05 3.31 41.18 3.56
4737 6128 2.424956 TGCACATGCCAATATTACGCAA 59.575 40.909 12.05 0.00 41.18 4.85
4738 6129 2.019984 TGCACATGCCAATATTACGCA 58.980 42.857 10.79 10.79 41.18 5.24
4739 6130 2.772568 TGCACATGCCAATATTACGC 57.227 45.000 0.49 0.00 41.18 4.42
4740 6131 6.586868 AATTTTGCACATGCCAATATTACG 57.413 33.333 11.15 0.00 41.18 3.18
4743 6134 7.969508 GCTTAAAATTTTGCACATGCCAATATT 59.030 29.630 13.76 1.45 41.18 1.28
4744 6135 7.120873 TGCTTAAAATTTTGCACATGCCAATAT 59.879 29.630 13.76 0.00 41.18 1.28
4768 6159 3.264104 AGCCAAATAAACACATGCATGC 58.736 40.909 26.53 11.82 0.00 4.06
4992 6384 0.178975 ACGTCCCCAAAATGCAAGGA 60.179 50.000 0.00 0.00 0.00 3.36
5017 6412 0.393537 ATGCAGGCACAGGTTCTAGC 60.394 55.000 0.00 0.00 0.00 3.42
5025 6420 6.321848 TCATCATTAATAATGCAGGCACAG 57.678 37.500 8.06 0.00 38.77 3.66
5073 6468 7.253883 GCGCTAGGATTTTTGAAATTCAGAATG 60.254 37.037 0.00 0.76 37.54 2.67
5309 6704 5.387752 GCAGAAATAAACGAGCAAAAGCAAG 60.388 40.000 0.00 0.00 0.00 4.01
5317 6712 3.673052 GCAATGGCAGAAATAAACGAGCA 60.673 43.478 0.00 0.00 40.72 4.26
5376 6771 7.596494 CCAGATACAACAAAACTTGATGTGAT 58.404 34.615 11.27 3.36 44.81 3.06
5387 6782 5.973899 TTAGCATGCCAGATACAACAAAA 57.026 34.783 15.66 0.00 0.00 2.44
5432 6827 3.314541 AGTTAAGTGTTCCTACCTGCG 57.685 47.619 0.00 0.00 0.00 5.18
5478 6873 6.092122 CGTTACCACTTGAATCTTGCTCATTA 59.908 38.462 0.00 0.00 0.00 1.90
5493 6888 4.142556 CCACACTTGAAAACGTTACCACTT 60.143 41.667 0.00 0.00 0.00 3.16
5499 6894 2.608546 CCGACCACACTTGAAAACGTTA 59.391 45.455 0.00 0.00 0.00 3.18
5503 6898 0.030235 GGCCGACCACACTTGAAAAC 59.970 55.000 0.00 0.00 35.26 2.43
5742 7137 1.228154 AGGGACAAGAAACGGGTGC 60.228 57.895 0.00 0.00 0.00 5.01
5748 7143 1.149148 GCACGAGAGGGACAAGAAAC 58.851 55.000 0.00 0.00 35.60 2.78
5763 7158 4.114997 GGCAAATCCCGTGGCACG 62.115 66.667 31.78 31.78 41.05 5.34
5827 7222 0.758734 TTGTCCCAGTGTGGTCTGAG 59.241 55.000 0.00 0.00 37.61 3.35
5882 7277 1.603802 CCTCACACTTTGCAATCACGT 59.396 47.619 0.00 0.00 0.00 4.49
5898 7293 2.259917 TGACTGCTTTGATCCTCCTCA 58.740 47.619 0.00 0.00 0.00 3.86
5899 7294 3.340814 TTGACTGCTTTGATCCTCCTC 57.659 47.619 0.00 0.00 0.00 3.71
5926 7321 3.313012 TGCTATGCTGTGTTACGTTCT 57.687 42.857 0.00 0.00 0.00 3.01
5927 7322 4.092821 TCAATGCTATGCTGTGTTACGTTC 59.907 41.667 0.00 0.00 0.00 3.95
5941 7336 1.202521 TCGACATGCCGTCAATGCTAT 60.203 47.619 0.16 0.00 45.70 2.97
5946 7341 0.740868 CACCTCGACATGCCGTCAAT 60.741 55.000 0.16 0.00 45.70 2.57
5948 7343 2.261361 CACCTCGACATGCCGTCA 59.739 61.111 0.16 0.00 45.70 4.35
5970 7365 1.061570 GCTGAGCTGTAACATGCGC 59.938 57.895 0.00 0.00 0.00 6.09
5990 7385 0.107993 CTCAAGGAGAAGATGGCGCA 60.108 55.000 10.83 0.00 0.00 6.09
6006 7401 5.106197 CCGTTGGAATTGATGTTTGATCTCA 60.106 40.000 0.00 0.00 0.00 3.27
6030 7425 3.549221 GCCTCAGTAGCTGTCTATCGAAC 60.549 52.174 0.00 0.00 32.61 3.95
6067 7462 1.741770 GGTCAGCCGCGAATCTTGT 60.742 57.895 8.23 0.00 0.00 3.16
6143 7539 2.938451 CAGCACGACACATACATGGAAT 59.062 45.455 0.00 0.00 0.00 3.01
6161 7557 2.022129 CACCAACGACGACCTCAGC 61.022 63.158 0.00 0.00 0.00 4.26
6215 7615 3.788333 CGATTACCGGTTGTTCTAGGA 57.212 47.619 15.04 0.00 33.91 2.94
6238 7638 0.852777 CTCGTGTCACAAACGGTCAG 59.147 55.000 3.42 0.00 41.34 3.51
6239 7639 0.528901 CCTCGTGTCACAAACGGTCA 60.529 55.000 3.42 0.00 41.34 4.02
6244 7644 2.285977 AGGAAACCTCGTGTCACAAAC 58.714 47.619 3.42 0.00 0.00 2.93
6321 7726 3.287222 TCAGGACCAAACAGACAAAAGG 58.713 45.455 0.00 0.00 0.00 3.11
6322 7727 4.981806 TTCAGGACCAAACAGACAAAAG 57.018 40.909 0.00 0.00 0.00 2.27
6323 7728 5.930837 AATTCAGGACCAAACAGACAAAA 57.069 34.783 0.00 0.00 0.00 2.44
6390 7802 0.175760 CGACCCCAACTCATCATCGT 59.824 55.000 0.00 0.00 0.00 3.73
6391 7803 1.154205 GCGACCCCAACTCATCATCG 61.154 60.000 0.00 0.00 0.00 3.84
6392 7804 0.107703 TGCGACCCCAACTCATCATC 60.108 55.000 0.00 0.00 0.00 2.92
6505 7918 6.652481 ACCTTCAATTCTAACATCAGTCAGTG 59.348 38.462 0.00 0.00 0.00 3.66
6508 7921 9.739276 AAATACCTTCAATTCTAACATCAGTCA 57.261 29.630 0.00 0.00 0.00 3.41
6529 7942 5.578776 GCCCAACAACATACAGCTAAATAC 58.421 41.667 0.00 0.00 0.00 1.89
6537 7950 0.168788 CTGCGCCCAACAACATACAG 59.831 55.000 4.18 0.00 0.00 2.74
6538 7951 1.240641 CCTGCGCCCAACAACATACA 61.241 55.000 4.18 0.00 0.00 2.29
6541 7954 1.526575 CTTCCTGCGCCCAACAACAT 61.527 55.000 4.18 0.00 0.00 2.71
6542 7955 2.124109 TTCCTGCGCCCAACAACA 60.124 55.556 4.18 0.00 0.00 3.33
6543 7956 2.644992 CTTCCTGCGCCCAACAAC 59.355 61.111 4.18 0.00 0.00 3.32
6571 7988 0.319383 GATCATCATCAGACGCGGCT 60.319 55.000 9.84 9.84 0.00 5.52
6579 7996 1.005804 CGCCGACGGATCATCATCAG 61.006 60.000 20.50 0.00 34.97 2.90
6593 8010 1.801771 CAACAATACCTCAAACGCCGA 59.198 47.619 0.00 0.00 0.00 5.54
6601 8018 5.380900 TGGTTTGATCACAACAATACCTCA 58.619 37.500 17.03 6.42 35.63 3.86
6603 8020 5.010617 GGTTGGTTTGATCACAACAATACCT 59.989 40.000 22.11 0.00 44.61 3.08
6604 8021 5.227152 GGTTGGTTTGATCACAACAATACC 58.773 41.667 22.11 14.68 44.61 2.73
6605 8022 4.915085 CGGTTGGTTTGATCACAACAATAC 59.085 41.667 22.11 14.79 44.61 1.89
6607 8024 3.798548 GCGGTTGGTTTGATCACAACAAT 60.799 43.478 22.11 0.00 44.61 2.71
6608 8025 2.480416 GCGGTTGGTTTGATCACAACAA 60.480 45.455 22.11 16.63 44.61 2.83
6665 8093 2.246719 ACAGACAAGAGAACTGTGCC 57.753 50.000 0.00 0.00 42.18 5.01
6681 8109 3.003394 TCAACCCATATTGGAGCACAG 57.997 47.619 0.00 0.00 40.96 3.66
6693 8121 7.850193 AGCACAAAACATAATAATCAACCCAT 58.150 30.769 0.00 0.00 0.00 4.00
6714 8142 2.413112 TCACTCGTGTACGTACTAGCAC 59.587 50.000 25.12 14.38 40.80 4.40
6716 8144 3.411751 GTTCACTCGTGTACGTACTAGC 58.588 50.000 25.12 14.44 40.80 3.42
6718 8146 2.742053 GGGTTCACTCGTGTACGTACTA 59.258 50.000 25.12 10.10 40.80 1.82
6728 8156 1.374252 GTGCGATGGGTTCACTCGT 60.374 57.895 0.00 0.00 34.96 4.18
6729 8157 2.444624 CGTGCGATGGGTTCACTCG 61.445 63.158 0.00 0.00 35.57 4.18
6730 8158 1.078759 CTCGTGCGATGGGTTCACTC 61.079 60.000 0.00 0.00 0.00 3.51
6731 8159 1.079819 CTCGTGCGATGGGTTCACT 60.080 57.895 0.00 0.00 0.00 3.41
6783 8213 0.037046 GGGGCTCGTCCGTCTAAAAA 60.037 55.000 0.00 0.00 34.94 1.94
6787 8217 1.826921 GATGGGGCTCGTCCGTCTA 60.827 63.158 0.00 0.00 37.34 2.59
6791 8221 4.227134 CCAGATGGGGCTCGTCCG 62.227 72.222 2.14 0.00 34.94 4.79
6792 8222 3.083997 ACCAGATGGGGCTCGTCC 61.084 66.667 2.14 0.00 42.91 4.79
6816 8246 1.136891 GCAAAGTGGAAAGCACCAACT 59.863 47.619 0.00 0.00 41.87 3.16
6852 8282 9.461312 ACTTGGATTACTACAAAAGATAATGCA 57.539 29.630 0.00 0.00 34.70 3.96
6870 8300 4.950200 TGCCCTTGCACTTGGATT 57.050 50.000 0.00 0.00 44.23 3.01
6892 8322 6.286240 TGAGCATAGATAGCATTATCCGTT 57.714 37.500 0.00 0.00 37.05 4.44
6896 8326 7.776107 TGTACCTGAGCATAGATAGCATTATC 58.224 38.462 0.00 0.00 36.69 1.75
6898 8328 7.724490 ATGTACCTGAGCATAGATAGCATTA 57.276 36.000 0.00 0.00 0.00 1.90
6904 8334 5.646793 GGACGTATGTACCTGAGCATAGATA 59.353 44.000 0.00 0.00 0.00 1.98
6908 8338 2.551032 CGGACGTATGTACCTGAGCATA 59.449 50.000 0.00 0.00 0.00 3.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.