Multiple sequence alignment - TraesCS4A01G271100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G271100 chr4A 100.000 5278 0 0 1 5278 582511391 582506114 0.000000e+00 9747.0
1 TraesCS4A01G271100 chr4A 90.845 284 19 6 4177 4459 582506886 582506609 1.790000e-99 374.0
2 TraesCS4A01G271100 chr4A 90.845 284 19 6 4506 4783 582507215 582506933 1.790000e-99 374.0
3 TraesCS4A01G271100 chr4D 93.084 3369 167 28 709 4038 18723438 18726779 0.000000e+00 4870.0
4 TraesCS4A01G271100 chr4D 88.577 534 46 6 113 643 18722919 18723440 7.460000e-178 634.0
5 TraesCS4A01G271100 chr4D 91.860 86 5 1 3 86 18722837 18722922 9.290000e-23 119.0
6 TraesCS4A01G271100 chr4D 76.471 255 27 16 4070 4320 18726839 18727064 2.010000e-19 108.0
7 TraesCS4A01G271100 chr4B 90.723 2490 161 34 1852 4320 30837897 30840337 0.000000e+00 3254.0
8 TraesCS4A01G271100 chr4B 87.899 752 46 12 959 1689 30837169 30837896 0.000000e+00 843.0
9 TraesCS4A01G271100 chr4B 89.709 515 41 8 113 616 30836456 30836969 0.000000e+00 647.0
10 TraesCS4A01G271100 chr4B 89.604 202 18 3 720 918 30836970 30837171 2.440000e-63 254.0
11 TraesCS4A01G271100 chr7A 85.119 168 20 5 1687 1853 719012438 719012601 3.270000e-37 167.0
12 TraesCS4A01G271100 chr7A 84.524 168 21 5 1687 1853 719286307 719286470 1.520000e-35 161.0
13 TraesCS4A01G271100 chr7A 85.938 64 8 1 415 478 168875411 168875473 3.410000e-07 67.6
14 TraesCS4A01G271100 chr6A 85.535 159 19 4 1693 1850 45784715 45784870 4.230000e-36 163.0
15 TraesCS4A01G271100 chr1D 84.795 171 16 7 1690 1858 452344726 452344564 4.230000e-36 163.0
16 TraesCS4A01G271100 chr7D 84.848 165 20 5 1690 1851 5492207 5492045 1.520000e-35 161.0
17 TraesCS4A01G271100 chr3D 84.848 165 18 3 1690 1851 293809876 293809716 5.470000e-35 159.0
18 TraesCS4A01G271100 chr1A 84.756 164 19 4 1691 1852 291255980 291255821 5.470000e-35 159.0
19 TraesCS4A01G271100 chr5D 83.815 173 21 7 1681 1851 476690317 476690150 1.970000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G271100 chr4A 582506114 582511391 5277 True 9747.00 9747 100.00000 1 5278 1 chr4A.!!$R1 5277
1 TraesCS4A01G271100 chr4A 582506609 582507215 606 True 374.00 374 90.84500 4177 4783 2 chr4A.!!$R2 606
2 TraesCS4A01G271100 chr4D 18722837 18727064 4227 False 1432.75 4870 87.49800 3 4320 4 chr4D.!!$F1 4317
3 TraesCS4A01G271100 chr4B 30836456 30840337 3881 False 1249.50 3254 89.48375 113 4320 4 chr4B.!!$F1 4207

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
813 839 0.250038 AATCACATGCTCGATCGGGG 60.250 55.0 18.35 10.67 0.0 5.73 F
1088 1131 0.037232 GAGTTCCACACCTTCCTCCG 60.037 60.0 0.00 0.00 0.0 4.63 F
2334 2388 0.037605 GGTTCGGGGCCATAGTATCG 60.038 60.0 4.39 0.00 0.0 2.92 F
3364 3421 0.235926 GTCCGCTTTGTTCTGTGCTC 59.764 55.0 0.00 0.00 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1677 1728 0.463620 GGAGGGAGCAGATCACAGAC 59.536 60.0 0.0 0.0 31.63 3.51 R
2904 2959 0.668535 GCCACAACAAGGACCTGAAC 59.331 55.0 0.0 0.0 0.00 3.18 R
3592 3649 0.171455 CGACGGGGATAGCAGATAGC 59.829 60.0 0.0 0.0 46.19 2.97 R
5248 5366 0.182537 CGTGGCCCAATCTATCCCAA 59.817 55.0 0.0 0.0 0.00 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 91 3.375782 CATGGAGCGACATGTATGAGA 57.624 47.619 13.45 0.00 42.48 3.27
89 92 3.721035 CATGGAGCGACATGTATGAGAA 58.279 45.455 13.45 0.00 42.48 2.87
90 93 3.443099 TGGAGCGACATGTATGAGAAG 57.557 47.619 0.00 0.00 0.00 2.85
91 94 3.023832 TGGAGCGACATGTATGAGAAGA 58.976 45.455 0.00 0.00 0.00 2.87
92 95 3.638627 TGGAGCGACATGTATGAGAAGAT 59.361 43.478 0.00 0.00 0.00 2.40
93 96 3.986572 GGAGCGACATGTATGAGAAGATG 59.013 47.826 0.00 0.00 0.00 2.90
94 97 3.986572 GAGCGACATGTATGAGAAGATGG 59.013 47.826 0.00 0.00 0.00 3.51
95 98 2.478134 GCGACATGTATGAGAAGATGGC 59.522 50.000 0.00 0.00 0.00 4.40
96 99 3.721035 CGACATGTATGAGAAGATGGCA 58.279 45.455 0.00 0.00 27.31 4.92
97 100 4.313282 CGACATGTATGAGAAGATGGCAT 58.687 43.478 0.00 0.00 27.31 4.40
98 101 4.151867 CGACATGTATGAGAAGATGGCATG 59.848 45.833 3.81 0.00 38.41 4.06
99 102 5.045012 ACATGTATGAGAAGATGGCATGT 57.955 39.130 3.81 0.00 40.06 3.21
100 103 5.443283 ACATGTATGAGAAGATGGCATGTT 58.557 37.500 9.92 9.92 41.46 2.71
101 104 5.298527 ACATGTATGAGAAGATGGCATGTTG 59.701 40.000 15.24 0.16 41.46 3.33
102 105 5.101648 TGTATGAGAAGATGGCATGTTGA 57.898 39.130 15.24 0.00 0.00 3.18
103 106 5.499313 TGTATGAGAAGATGGCATGTTGAA 58.501 37.500 15.24 0.35 0.00 2.69
104 107 6.124340 TGTATGAGAAGATGGCATGTTGAAT 58.876 36.000 15.24 7.73 0.00 2.57
105 108 7.281841 TGTATGAGAAGATGGCATGTTGAATA 58.718 34.615 15.24 6.83 0.00 1.75
106 109 6.879276 ATGAGAAGATGGCATGTTGAATAG 57.121 37.500 15.24 0.00 0.00 1.73
107 110 4.577693 TGAGAAGATGGCATGTTGAATAGC 59.422 41.667 15.24 0.00 0.00 2.97
128 131 3.057969 CACTTATGGAGGTGCTTGTGA 57.942 47.619 0.00 0.00 0.00 3.58
142 145 2.033448 GTGACCGGTGATGCCCAA 59.967 61.111 14.63 0.00 0.00 4.12
143 146 1.378514 GTGACCGGTGATGCCCAAT 60.379 57.895 14.63 0.00 0.00 3.16
181 184 1.338136 ATGGACGGTGGGGAGATGAC 61.338 60.000 0.00 0.00 0.00 3.06
194 197 0.465824 AGATGACGGGGTAGGAGTCG 60.466 60.000 0.00 0.00 37.69 4.18
195 198 1.453762 GATGACGGGGTAGGAGTCGG 61.454 65.000 0.00 0.00 37.69 4.79
248 251 1.600663 CCTCCGCTACGATGATGTCAC 60.601 57.143 0.00 0.00 0.00 3.67
255 258 1.266178 ACGATGATGTCACTGGACCA 58.734 50.000 0.00 0.00 43.65 4.02
301 306 6.693315 AAAGGAATCTTTCGTTGTGAAGAA 57.307 33.333 0.00 0.00 38.76 2.52
320 325 4.331968 AGAACGACCATGCCATAAAAGAA 58.668 39.130 0.00 0.00 0.00 2.52
499 520 7.617041 AATCTTCTCGGAAAAATCGATTCTT 57.383 32.000 11.83 3.20 36.01 2.52
501 522 6.163476 TCTTCTCGGAAAAATCGATTCTTCA 58.837 36.000 22.22 5.52 36.01 3.02
509 530 7.591426 CGGAAAAATCGATTCTTCAAAAAGACT 59.409 33.333 22.22 0.00 41.23 3.24
510 531 9.893305 GGAAAAATCGATTCTTCAAAAAGACTA 57.107 29.630 22.22 0.00 41.23 2.59
515 536 9.930693 AATCGATTCTTCAAAAAGACTACTAGT 57.069 29.630 4.39 0.00 41.23 2.57
517 538 9.837525 TCGATTCTTCAAAAAGACTACTAGTAC 57.162 33.333 0.00 0.00 41.23 2.73
542 566 5.121811 TCTAAAGCATTTGGAGAGCTGATC 58.878 41.667 0.00 0.00 40.81 2.92
558 582 6.721208 AGAGCTGATCTTGTTATTTTTCCCAA 59.279 34.615 0.00 0.00 32.99 4.12
598 622 4.792702 TCTCATCATAAAAATTTGCACGCG 59.207 37.500 3.53 3.53 0.00 6.01
618 642 3.361940 GCGAACAGAAAAGTAAGCAATGC 59.638 43.478 0.00 0.00 0.00 3.56
624 648 7.979444 ACAGAAAAGTAAGCAATGCTAGTTA 57.021 32.000 8.68 0.00 38.25 2.24
625 649 7.807680 ACAGAAAAGTAAGCAATGCTAGTTAC 58.192 34.615 8.68 7.85 38.25 2.50
628 652 8.846211 AGAAAAGTAAGCAATGCTAGTTACAAA 58.154 29.630 8.68 0.00 38.25 2.83
629 653 9.118236 GAAAAGTAAGCAATGCTAGTTACAAAG 57.882 33.333 8.68 0.00 38.25 2.77
630 654 7.979444 AAGTAAGCAATGCTAGTTACAAAGA 57.021 32.000 8.68 0.00 38.25 2.52
712 736 1.758936 CTCATGGCAGGAGCATTTGA 58.241 50.000 16.90 0.00 44.61 2.69
713 737 2.307768 CTCATGGCAGGAGCATTTGAT 58.692 47.619 16.90 0.00 44.61 2.57
714 738 2.293677 CTCATGGCAGGAGCATTTGATC 59.706 50.000 16.90 0.00 44.61 2.92
715 739 2.092049 TCATGGCAGGAGCATTTGATCT 60.092 45.455 0.00 0.00 44.61 2.75
716 740 2.519771 TGGCAGGAGCATTTGATCTT 57.480 45.000 0.00 0.00 44.61 2.40
717 741 3.650281 TGGCAGGAGCATTTGATCTTA 57.350 42.857 0.00 0.00 44.61 2.10
757 781 7.772757 ACCTTCAGTTCAGATTTCTATTCATCC 59.227 37.037 0.00 0.00 0.00 3.51
784 810 1.352156 GAGAGCTGCACCCGTAAACG 61.352 60.000 1.02 0.00 39.44 3.60
813 839 0.250038 AATCACATGCTCGATCGGGG 60.250 55.000 18.35 10.67 0.00 5.73
932 959 1.566404 GTTTTGCCTGGAAAACACGG 58.434 50.000 18.34 0.00 42.80 4.94
960 987 2.693074 ACTCGCAAAACACCAGGATTTT 59.307 40.909 0.00 0.00 0.00 1.82
1062 1105 1.963855 CCCGTCGCCACATTCACAA 60.964 57.895 0.00 0.00 0.00 3.33
1088 1131 0.037232 GAGTTCCACACCTTCCTCCG 60.037 60.000 0.00 0.00 0.00 4.63
1089 1132 0.763223 AGTTCCACACCTTCCTCCGT 60.763 55.000 0.00 0.00 0.00 4.69
1090 1133 0.320508 GTTCCACACCTTCCTCCGTC 60.321 60.000 0.00 0.00 0.00 4.79
1091 1134 1.477685 TTCCACACCTTCCTCCGTCC 61.478 60.000 0.00 0.00 0.00 4.79
1136 1180 3.068691 TCTCGCCGACTTCCCCAG 61.069 66.667 0.00 0.00 0.00 4.45
1556 1603 7.148507 CGTCATCTACGGTAATACCTACCTTAG 60.149 44.444 7.95 7.73 46.75 2.18
1557 1604 7.663493 GTCATCTACGGTAATACCTACCTTAGT 59.337 40.741 7.95 0.00 46.04 2.24
1558 1605 8.880244 TCATCTACGGTAATACCTACCTTAGTA 58.120 37.037 7.95 0.09 46.04 1.82
1559 1606 8.940952 CATCTACGGTAATACCTACCTTAGTAC 58.059 40.741 7.95 0.00 46.04 2.73
1560 1607 7.450903 TCTACGGTAATACCTACCTTAGTACC 58.549 42.308 7.95 0.00 46.04 3.34
1561 1608 7.292591 TCTACGGTAATACCTACCTTAGTACCT 59.707 40.741 7.95 0.00 46.04 3.08
1591 1638 3.309138 TCTCTCTGCAGTTCGTACGATAC 59.691 47.826 20.27 18.44 0.00 2.24
1616 1664 0.606096 AGGTGTTAAAAATGGCGGCC 59.394 50.000 13.32 13.32 0.00 6.13
1622 1670 1.110442 TAAAAATGGCGGCCTCATGG 58.890 50.000 21.46 0.00 0.00 3.66
1667 1718 2.823924 TGTCCAGTAGCGCAACTTTA 57.176 45.000 11.47 0.00 0.00 1.85
1677 1728 5.638234 AGTAGCGCAACTTTACTAGGAAAAG 59.362 40.000 11.47 14.83 39.38 2.27
1714 1765 7.471679 GCTCCCTCCGTTTCTAAATATAAGACT 60.472 40.741 0.00 0.00 0.00 3.24
1771 1822 9.268268 TGTAGAGTTGTAGACACATTTTAAAGG 57.732 33.333 0.00 0.00 33.76 3.11
1784 1835 7.119262 ACACATTTTAAAGGGTAGATTCACTCG 59.881 37.037 0.00 0.00 0.00 4.18
1796 1847 2.512485 TTCACTCGTTTTGCTCCGTA 57.488 45.000 0.00 0.00 0.00 4.02
1814 1865 7.223971 TGCTCCGTATGTAGTTCATATTGAAAC 59.776 37.037 0.00 0.00 38.22 2.78
1815 1866 7.223971 GCTCCGTATGTAGTTCATATTGAAACA 59.776 37.037 0.00 0.00 38.22 2.83
1907 1960 6.887545 TGACAACTTCCTTTTCTTTGTTCCTA 59.112 34.615 0.00 0.00 30.60 2.94
1964 2017 1.140312 TTGAAGCCCTCACAGAACCT 58.860 50.000 0.00 0.00 32.21 3.50
1967 2020 1.422161 AAGCCCTCACAGAACCTGCT 61.422 55.000 0.00 0.00 34.37 4.24
2033 2086 2.163412 ACCATTTGTGATACGCGCATTT 59.837 40.909 5.73 0.00 36.78 2.32
2167 2220 1.741770 CAGCCTTCACAGTACGCCC 60.742 63.158 0.00 0.00 0.00 6.13
2170 2223 1.218316 CCTTCACAGTACGCCCTCC 59.782 63.158 0.00 0.00 0.00 4.30
2177 2230 2.125512 GTACGCCCTCCTGCACAG 60.126 66.667 0.00 0.00 0.00 3.66
2178 2231 4.082523 TACGCCCTCCTGCACAGC 62.083 66.667 0.00 0.00 0.00 4.40
2180 2233 3.774528 CGCCCTCCTGCACAGCTA 61.775 66.667 0.00 0.00 0.00 3.32
2186 2240 1.133790 CCTCCTGCACAGCTATTTTGC 59.866 52.381 0.00 0.00 36.76 3.68
2238 2292 8.964476 TGTTGTGGAGATATCTAAAAGAATCC 57.036 34.615 4.89 0.79 0.00 3.01
2239 2293 8.772250 TGTTGTGGAGATATCTAAAAGAATCCT 58.228 33.333 4.89 0.00 0.00 3.24
2240 2294 9.050601 GTTGTGGAGATATCTAAAAGAATCCTG 57.949 37.037 4.89 0.00 0.00 3.86
2241 2295 8.324191 TGTGGAGATATCTAAAAGAATCCTGT 57.676 34.615 4.89 0.00 0.00 4.00
2242 2296 8.206867 TGTGGAGATATCTAAAAGAATCCTGTG 58.793 37.037 4.89 0.00 0.00 3.66
2243 2297 8.207545 GTGGAGATATCTAAAAGAATCCTGTGT 58.792 37.037 4.89 0.00 0.00 3.72
2244 2298 8.206867 TGGAGATATCTAAAAGAATCCTGTGTG 58.793 37.037 4.89 0.00 0.00 3.82
2245 2299 8.424918 GGAGATATCTAAAAGAATCCTGTGTGA 58.575 37.037 4.89 0.00 0.00 3.58
2246 2300 9.474920 GAGATATCTAAAAGAATCCTGTGTGAG 57.525 37.037 4.89 0.00 0.00 3.51
2247 2301 7.930865 AGATATCTAAAAGAATCCTGTGTGAGC 59.069 37.037 2.53 0.00 0.00 4.26
2248 2302 5.227569 TCTAAAAGAATCCTGTGTGAGCA 57.772 39.130 0.00 0.00 0.00 4.26
2249 2303 4.997395 TCTAAAAGAATCCTGTGTGAGCAC 59.003 41.667 0.00 0.00 45.44 4.40
2298 2352 1.543065 ATGGCATTTTTGGCGCCTCA 61.543 50.000 29.70 11.92 46.39 3.86
2334 2388 0.037605 GGTTCGGGGCCATAGTATCG 60.038 60.000 4.39 0.00 0.00 2.92
2340 2394 4.028131 TCGGGGCCATAGTATCGATTATT 58.972 43.478 4.39 0.00 0.00 1.40
2343 2397 4.080526 GGGGCCATAGTATCGATTATTGGT 60.081 45.833 4.39 0.00 0.00 3.67
2361 2415 0.453390 GTGTTGGCCTGCTAGAATGC 59.547 55.000 3.32 0.00 0.00 3.56
2390 2444 5.163632 GCTCTCCTCCTTGTGTAAGTACTAC 60.164 48.000 0.00 0.00 31.80 2.73
2616 2670 8.043710 AGATCGTCTTTTCAGAGATTTGGTTAT 58.956 33.333 0.00 0.00 0.00 1.89
2649 2703 8.862550 AATTTTCATCTGTCTTGACAAAGAAC 57.137 30.769 4.95 0.00 44.01 3.01
2674 2728 9.158233 ACATAATTTTGATTTTGCAATCCTCTG 57.842 29.630 0.00 0.00 38.50 3.35
2690 2744 4.594970 TCCTCTGTTGTTGTTTCCAAAGA 58.405 39.130 0.00 0.00 30.94 2.52
2761 2815 3.802139 TGCTTAGAACGGAGCAAATATCG 59.198 43.478 0.00 0.00 45.19 2.92
2794 2848 5.247110 AGACAAGAAGAAGTTCATGGCTCTA 59.753 40.000 5.50 0.00 44.81 2.43
2823 2877 6.491403 AGCTTTGAGGTTCATAACTGAATTGT 59.509 34.615 0.00 0.00 43.08 2.71
2844 2898 4.159693 TGTGTACTTGCAGTCTCCGATATT 59.840 41.667 0.00 0.00 0.00 1.28
2873 2927 3.311871 GCTGCTGTAATCATCTTGGTCAG 59.688 47.826 0.00 0.00 0.00 3.51
2904 2959 3.637229 ACCACCTAACTGACCATCTATCG 59.363 47.826 0.00 0.00 0.00 2.92
2937 2992 2.672961 TGTGGCTTTCACCTCGATAG 57.327 50.000 0.00 0.00 45.48 2.08
2995 3050 4.142315 CCACGATTCCAGCTTTGAATCATT 60.142 41.667 24.79 14.32 45.37 2.57
3044 3099 2.683362 GGCTTCTTTTCCTTGGATACCG 59.317 50.000 0.00 0.00 0.00 4.02
3080 3135 2.817844 AGTCTTTTCAACGGGGTTATGC 59.182 45.455 0.00 0.00 0.00 3.14
3126 3181 8.434733 ACTTTTGAGAACCTTGTAGTAGTTTC 57.565 34.615 0.00 0.00 0.00 2.78
3143 3198 5.296151 AGTTTCATGAACAGTCTGGAGAA 57.704 39.130 7.89 0.00 40.84 2.87
3257 3314 0.761702 TAGAACCGGTATGGGGAGCC 60.762 60.000 8.00 0.00 44.64 4.70
3272 3329 2.200170 GAGCCGCATTCGCTTGGTTT 62.200 55.000 0.00 0.00 35.30 3.27
3364 3421 0.235926 GTCCGCTTTGTTCTGTGCTC 59.764 55.000 0.00 0.00 0.00 4.26
3572 3629 4.342092 GGAATACATTTGAATCCCCACTGG 59.658 45.833 0.00 0.00 0.00 4.00
3581 3638 3.636231 CCCCACTGGAACGGCAGA 61.636 66.667 0.00 0.00 39.14 4.26
3653 3710 5.072464 GGGAGCCAATTAGAGAGGTAAATCT 59.928 44.000 0.00 0.00 0.00 2.40
3682 3739 0.590195 GCTGTCAACTGCTTCACCAG 59.410 55.000 4.93 0.00 37.75 4.00
3714 3771 1.672363 CTGTGCTCTTTTGTGCTGTCA 59.328 47.619 0.00 0.00 39.44 3.58
3715 3772 1.401552 TGTGCTCTTTTGTGCTGTCAC 59.598 47.619 0.00 0.00 43.40 3.67
3789 3849 6.071051 GGAAGGATAAAACATTGTAGCCCAAA 60.071 38.462 0.00 0.00 36.44 3.28
3809 3869 1.899814 AGTCAAGGGAGTAACGCATCA 59.100 47.619 0.00 0.00 0.00 3.07
3813 3873 0.389391 AGGGAGTAACGCATCATCCG 59.611 55.000 0.00 0.00 0.00 4.18
3818 3878 3.444916 GAGTAACGCATCATCCGAAGAA 58.555 45.455 0.00 0.00 0.00 2.52
3821 3881 2.386661 ACGCATCATCCGAAGAAAGT 57.613 45.000 0.00 0.00 0.00 2.66
3830 3898 5.551233 TCATCCGAAGAAAGTGTCAAGATT 58.449 37.500 0.00 0.00 0.00 2.40
3844 3912 6.881065 AGTGTCAAGATTGCAACTGTATGTAT 59.119 34.615 0.00 0.00 0.00 2.29
3856 3924 7.445707 TGCAACTGTATGTATACCAAAACAAGA 59.554 33.333 0.00 0.00 32.33 3.02
3930 3999 2.059541 GCGTTTGCTCTACGAGAAAGT 58.940 47.619 9.42 0.00 41.33 2.66
4053 4168 1.745653 GCATTACTGGCTGGAAACTCC 59.254 52.381 0.00 0.00 36.96 3.85
4054 4169 2.009774 CATTACTGGCTGGAAACTCCG 58.990 52.381 0.00 0.00 40.17 4.63
4055 4170 1.344065 TTACTGGCTGGAAACTCCGA 58.656 50.000 0.00 0.00 40.17 4.55
4056 4171 0.895530 TACTGGCTGGAAACTCCGAG 59.104 55.000 0.00 0.00 40.17 4.63
4057 4172 1.743252 CTGGCTGGAAACTCCGAGC 60.743 63.158 0.00 7.98 40.17 5.03
4058 4173 2.436824 GGCTGGAAACTCCGAGCC 60.437 66.667 15.69 15.69 46.03 4.70
4059 4174 2.815647 GCTGGAAACTCCGAGCCG 60.816 66.667 0.00 0.00 40.17 5.52
4066 4181 2.333701 AAACTCCGAGCCGGTGGTTT 62.334 55.000 21.06 21.06 46.06 3.27
4067 4182 2.985768 AAACTCCGAGCCGGTGGTTTA 61.986 52.381 23.08 5.20 46.06 2.01
4069 4184 2.435410 CCGAGCCGGTGGTTTACC 60.435 66.667 1.90 0.00 46.56 2.85
4106 4221 2.268076 GCCGGTGTGAAGTGGCAAT 61.268 57.895 1.90 0.00 46.76 3.56
4107 4222 0.958382 GCCGGTGTGAAGTGGCAATA 60.958 55.000 1.90 0.00 46.76 1.90
4108 4223 1.750193 CCGGTGTGAAGTGGCAATAT 58.250 50.000 0.00 0.00 0.00 1.28
4115 4231 5.127031 GGTGTGAAGTGGCAATATAAATGGT 59.873 40.000 0.00 0.00 0.00 3.55
4815 4933 4.111255 TGGAAGTTCCATTCATGTTCCA 57.889 40.909 21.05 6.16 42.67 3.53
4816 4934 4.676109 TGGAAGTTCCATTCATGTTCCAT 58.324 39.130 21.05 0.00 42.67 3.41
4817 4935 5.085920 TGGAAGTTCCATTCATGTTCCATT 58.914 37.500 21.05 0.00 42.67 3.16
4818 4936 5.543405 TGGAAGTTCCATTCATGTTCCATTT 59.457 36.000 21.05 0.00 42.67 2.32
4819 4937 6.043012 TGGAAGTTCCATTCATGTTCCATTTT 59.957 34.615 21.05 0.00 42.67 1.82
4820 4938 6.369615 GGAAGTTCCATTCATGTTCCATTTTG 59.630 38.462 17.44 0.00 36.28 2.44
4821 4939 6.423776 AGTTCCATTCATGTTCCATTTTGT 57.576 33.333 0.00 0.00 0.00 2.83
4822 4940 7.537596 AGTTCCATTCATGTTCCATTTTGTA 57.462 32.000 0.00 0.00 0.00 2.41
4823 4941 7.605449 AGTTCCATTCATGTTCCATTTTGTAG 58.395 34.615 0.00 0.00 0.00 2.74
4824 4942 7.233348 AGTTCCATTCATGTTCCATTTTGTAGT 59.767 33.333 0.00 0.00 0.00 2.73
4825 4943 7.537596 TCCATTCATGTTCCATTTTGTAGTT 57.462 32.000 0.00 0.00 0.00 2.24
4826 4944 8.642935 TCCATTCATGTTCCATTTTGTAGTTA 57.357 30.769 0.00 0.00 0.00 2.24
4827 4945 9.253832 TCCATTCATGTTCCATTTTGTAGTTAT 57.746 29.630 0.00 0.00 0.00 1.89
4828 4946 9.304731 CCATTCATGTTCCATTTTGTAGTTATG 57.695 33.333 0.00 0.00 0.00 1.90
4829 4947 9.859427 CATTCATGTTCCATTTTGTAGTTATGT 57.141 29.630 0.00 0.00 0.00 2.29
4832 4950 9.733556 TCATGTTCCATTTTGTAGTTATGTACT 57.266 29.630 0.00 0.00 41.04 2.73
4835 4953 9.787435 TGTTCCATTTTGTAGTTATGTACTTCT 57.213 29.630 0.00 0.00 38.33 2.85
4876 4994 8.827677 ACCTTACATTATTATTTCTTCAGACGC 58.172 33.333 0.00 0.00 0.00 5.19
4877 4995 8.826710 CCTTACATTATTATTTCTTCAGACGCA 58.173 33.333 0.00 0.00 0.00 5.24
4895 5013 3.923412 CGCATACGTTACATGACTTTGG 58.077 45.455 0.00 0.00 33.53 3.28
4896 5014 3.615056 CGCATACGTTACATGACTTTGGA 59.385 43.478 0.00 0.00 33.53 3.53
4897 5015 4.092237 CGCATACGTTACATGACTTTGGAA 59.908 41.667 0.00 0.00 33.53 3.53
4898 5016 5.220586 CGCATACGTTACATGACTTTGGAAT 60.221 40.000 0.00 0.00 33.53 3.01
4899 5017 5.965334 GCATACGTTACATGACTTTGGAATG 59.035 40.000 0.00 0.00 33.42 2.67
4900 5018 4.419522 ACGTTACATGACTTTGGAATGC 57.580 40.909 0.00 0.00 30.78 3.56
4901 5019 3.818210 ACGTTACATGACTTTGGAATGCA 59.182 39.130 0.00 0.00 30.78 3.96
4902 5020 4.277174 ACGTTACATGACTTTGGAATGCAA 59.723 37.500 0.00 0.00 30.78 4.08
4903 5021 4.853196 CGTTACATGACTTTGGAATGCAAG 59.147 41.667 0.00 0.00 0.00 4.01
4904 5022 5.334802 CGTTACATGACTTTGGAATGCAAGA 60.335 40.000 0.00 0.00 0.00 3.02
4905 5023 4.510038 ACATGACTTTGGAATGCAAGAC 57.490 40.909 0.00 0.00 0.00 3.01
4906 5024 3.890756 ACATGACTTTGGAATGCAAGACA 59.109 39.130 0.00 0.00 0.00 3.41
4907 5025 3.988379 TGACTTTGGAATGCAAGACAC 57.012 42.857 0.00 0.00 0.00 3.67
4908 5026 3.286353 TGACTTTGGAATGCAAGACACA 58.714 40.909 0.00 0.00 0.00 3.72
4909 5027 3.890756 TGACTTTGGAATGCAAGACACAT 59.109 39.130 0.00 0.00 0.00 3.21
4910 5028 5.069318 TGACTTTGGAATGCAAGACACATA 58.931 37.500 0.00 0.00 0.00 2.29
4911 5029 5.534278 TGACTTTGGAATGCAAGACACATAA 59.466 36.000 0.00 0.00 0.00 1.90
4912 5030 6.209192 TGACTTTGGAATGCAAGACACATAAT 59.791 34.615 0.00 0.00 0.00 1.28
4913 5031 6.996509 ACTTTGGAATGCAAGACACATAATT 58.003 32.000 0.00 0.00 0.00 1.40
4914 5032 7.444299 ACTTTGGAATGCAAGACACATAATTT 58.556 30.769 0.00 0.00 0.00 1.82
4915 5033 7.933033 ACTTTGGAATGCAAGACACATAATTTT 59.067 29.630 0.00 0.00 0.00 1.82
4916 5034 7.887996 TTGGAATGCAAGACACATAATTTTC 57.112 32.000 0.00 0.00 0.00 2.29
4917 5035 6.990798 TGGAATGCAAGACACATAATTTTCA 58.009 32.000 0.00 0.00 0.00 2.69
4918 5036 7.613585 TGGAATGCAAGACACATAATTTTCAT 58.386 30.769 0.00 0.00 0.00 2.57
4919 5037 7.546316 TGGAATGCAAGACACATAATTTTCATG 59.454 33.333 0.00 0.00 0.00 3.07
4920 5038 6.897259 ATGCAAGACACATAATTTTCATGC 57.103 33.333 0.00 0.00 34.17 4.06
4921 5039 6.028146 TGCAAGACACATAATTTTCATGCT 57.972 33.333 0.00 0.00 34.56 3.79
4922 5040 6.457355 TGCAAGACACATAATTTTCATGCTT 58.543 32.000 0.00 0.00 34.56 3.91
4923 5041 6.930164 TGCAAGACACATAATTTTCATGCTTT 59.070 30.769 0.00 0.00 34.56 3.51
4924 5042 7.441760 TGCAAGACACATAATTTTCATGCTTTT 59.558 29.630 0.00 0.00 34.56 2.27
4925 5043 8.284693 GCAAGACACATAATTTTCATGCTTTTT 58.715 29.630 0.00 0.00 31.59 1.94
4980 5098 7.406553 TGTAAGTCATAAAATGCATACTTCGC 58.593 34.615 12.39 8.61 30.50 4.70
4981 5099 6.435430 AAGTCATAAAATGCATACTTCGCA 57.565 33.333 0.00 0.00 44.94 5.10
4988 5106 1.016627 TGCATACTTCGCATTGAGCC 58.983 50.000 0.00 0.00 41.38 4.70
4989 5107 1.016627 GCATACTTCGCATTGAGCCA 58.983 50.000 0.00 0.00 41.38 4.75
4990 5108 1.605710 GCATACTTCGCATTGAGCCAT 59.394 47.619 0.00 0.00 41.38 4.40
4991 5109 2.350197 GCATACTTCGCATTGAGCCATC 60.350 50.000 0.00 0.00 41.38 3.51
4992 5110 2.988010 TACTTCGCATTGAGCCATCT 57.012 45.000 0.00 0.00 41.38 2.90
4993 5111 2.988010 ACTTCGCATTGAGCCATCTA 57.012 45.000 0.00 0.00 41.38 1.98
4994 5112 2.555199 ACTTCGCATTGAGCCATCTAC 58.445 47.619 0.00 0.00 41.38 2.59
4995 5113 2.169352 ACTTCGCATTGAGCCATCTACT 59.831 45.455 0.00 0.00 41.38 2.57
4996 5114 2.988010 TCGCATTGAGCCATCTACTT 57.012 45.000 0.00 0.00 41.38 2.24
4997 5115 2.826428 TCGCATTGAGCCATCTACTTC 58.174 47.619 0.00 0.00 41.38 3.01
4998 5116 1.869767 CGCATTGAGCCATCTACTTCC 59.130 52.381 0.00 0.00 41.38 3.46
4999 5117 2.742856 CGCATTGAGCCATCTACTTCCA 60.743 50.000 0.00 0.00 41.38 3.53
5000 5118 3.484407 GCATTGAGCCATCTACTTCCAT 58.516 45.455 0.00 0.00 37.23 3.41
5001 5119 4.645535 GCATTGAGCCATCTACTTCCATA 58.354 43.478 0.00 0.00 37.23 2.74
5002 5120 5.065914 GCATTGAGCCATCTACTTCCATAA 58.934 41.667 0.00 0.00 37.23 1.90
5003 5121 5.532406 GCATTGAGCCATCTACTTCCATAAA 59.468 40.000 0.00 0.00 37.23 1.40
5004 5122 6.039717 GCATTGAGCCATCTACTTCCATAAAA 59.960 38.462 0.00 0.00 37.23 1.52
5005 5123 7.255730 GCATTGAGCCATCTACTTCCATAAAAT 60.256 37.037 0.00 0.00 37.23 1.82
5006 5124 7.572523 TTGAGCCATCTACTTCCATAAAATG 57.427 36.000 0.00 0.00 0.00 2.32
5007 5125 5.532406 TGAGCCATCTACTTCCATAAAATGC 59.468 40.000 0.00 0.00 0.00 3.56
5008 5126 5.448654 AGCCATCTACTTCCATAAAATGCA 58.551 37.500 0.00 0.00 0.00 3.96
5009 5127 5.893255 AGCCATCTACTTCCATAAAATGCAA 59.107 36.000 0.00 0.00 0.00 4.08
5010 5128 6.552350 AGCCATCTACTTCCATAAAATGCAAT 59.448 34.615 0.00 0.00 0.00 3.56
5011 5129 7.070322 AGCCATCTACTTCCATAAAATGCAATT 59.930 33.333 0.00 0.00 38.98 2.32
5012 5130 7.170320 GCCATCTACTTCCATAAAATGCAATTG 59.830 37.037 0.00 0.00 36.10 2.32
5013 5131 8.199449 CCATCTACTTCCATAAAATGCAATTGT 58.801 33.333 7.40 0.00 36.10 2.71
5014 5132 9.590451 CATCTACTTCCATAAAATGCAATTGTT 57.410 29.630 7.40 0.00 36.10 2.83
5015 5133 9.807649 ATCTACTTCCATAAAATGCAATTGTTC 57.192 29.630 7.40 0.00 36.10 3.18
5016 5134 8.250332 TCTACTTCCATAAAATGCAATTGTTCC 58.750 33.333 7.40 0.00 36.10 3.62
5017 5135 6.767456 ACTTCCATAAAATGCAATTGTTCCA 58.233 32.000 7.40 0.00 36.10 3.53
5018 5136 7.222872 ACTTCCATAAAATGCAATTGTTCCAA 58.777 30.769 7.40 0.00 36.10 3.53
5019 5137 7.884354 ACTTCCATAAAATGCAATTGTTCCAAT 59.116 29.630 7.40 0.00 36.10 3.16
5020 5138 7.846644 TCCATAAAATGCAATTGTTCCAATC 57.153 32.000 7.40 0.00 36.10 2.67
5021 5139 7.622713 TCCATAAAATGCAATTGTTCCAATCT 58.377 30.769 7.40 0.00 36.10 2.40
5022 5140 8.102047 TCCATAAAATGCAATTGTTCCAATCTT 58.898 29.630 7.40 0.00 36.10 2.40
5023 5141 8.178964 CCATAAAATGCAATTGTTCCAATCTTG 58.821 33.333 7.40 0.00 36.10 3.02
5024 5142 6.563222 AAAATGCAATTGTTCCAATCTTGG 57.437 33.333 7.40 2.37 43.04 3.61
5025 5143 4.004982 AATGCAATTGTTCCAATCTTGGC 58.995 39.130 7.40 0.00 41.19 4.52
5026 5144 4.505215 AATGCAATTGTTCCAATCTTGGCA 60.505 37.500 7.40 0.00 41.19 4.92
5027 5145 6.315325 AATGCAATTGTTCCAATCTTGGCAG 61.315 40.000 7.40 0.00 41.19 4.85
5028 5146 8.425010 AATGCAATTGTTCCAATCTTGGCAGA 62.425 38.462 7.40 0.00 41.19 4.26
5029 5147 9.792291 AATGCAATTGTTCCAATCTTGGCAGAA 62.792 37.037 7.40 0.00 41.19 3.02
5037 5155 5.014808 CCAATCTTGGCAGAAATTTAGGG 57.985 43.478 0.00 0.00 42.21 3.53
5038 5156 4.711355 CCAATCTTGGCAGAAATTTAGGGA 59.289 41.667 0.00 0.00 42.21 4.20
5039 5157 5.364735 CCAATCTTGGCAGAAATTTAGGGAT 59.635 40.000 0.00 0.00 42.21 3.85
5040 5158 6.126968 CCAATCTTGGCAGAAATTTAGGGATT 60.127 38.462 0.00 0.00 42.21 3.01
5041 5159 6.721704 ATCTTGGCAGAAATTTAGGGATTC 57.278 37.500 0.00 0.00 30.76 2.52
5042 5160 4.956075 TCTTGGCAGAAATTTAGGGATTCC 59.044 41.667 0.00 0.00 0.00 3.01
5043 5161 4.329638 TGGCAGAAATTTAGGGATTCCA 57.670 40.909 4.80 0.00 34.83 3.53
5044 5162 4.682563 TGGCAGAAATTTAGGGATTCCAA 58.317 39.130 4.80 0.00 34.83 3.53
5045 5163 4.466015 TGGCAGAAATTTAGGGATTCCAAC 59.534 41.667 4.80 0.00 34.83 3.77
5046 5164 4.711846 GGCAGAAATTTAGGGATTCCAACT 59.288 41.667 4.80 0.00 34.83 3.16
5047 5165 5.187772 GGCAGAAATTTAGGGATTCCAACTT 59.812 40.000 4.80 0.00 34.83 2.66
5048 5166 6.333416 GCAGAAATTTAGGGATTCCAACTTC 58.667 40.000 4.80 0.00 34.83 3.01
5049 5167 6.153510 GCAGAAATTTAGGGATTCCAACTTCT 59.846 38.462 4.80 0.00 34.83 2.85
5050 5168 7.310052 GCAGAAATTTAGGGATTCCAACTTCTT 60.310 37.037 4.80 0.00 34.83 2.52
5051 5169 8.588472 CAGAAATTTAGGGATTCCAACTTCTTT 58.412 33.333 4.80 0.00 34.83 2.52
5052 5170 9.159254 AGAAATTTAGGGATTCCAACTTCTTTT 57.841 29.630 4.80 0.00 34.83 2.27
5053 5171 9.778741 GAAATTTAGGGATTCCAACTTCTTTTT 57.221 29.630 4.80 0.00 34.83 1.94
5077 5195 9.936759 TTTTTATGAACATTTAGGGATTCCAAC 57.063 29.630 4.80 0.00 34.83 3.77
5078 5196 8.893563 TTTATGAACATTTAGGGATTCCAACT 57.106 30.769 4.80 0.00 34.83 3.16
5079 5197 6.780457 ATGAACATTTAGGGATTCCAACTG 57.220 37.500 4.80 0.00 34.83 3.16
5080 5198 5.640147 TGAACATTTAGGGATTCCAACTGT 58.360 37.500 4.80 0.00 34.83 3.55
5081 5199 6.074648 TGAACATTTAGGGATTCCAACTGTT 58.925 36.000 4.80 7.91 33.87 3.16
5082 5200 6.553100 TGAACATTTAGGGATTCCAACTGTTT 59.447 34.615 4.80 0.00 32.71 2.83
5083 5201 6.590234 ACATTTAGGGATTCCAACTGTTTC 57.410 37.500 4.80 0.00 34.83 2.78
5084 5202 6.074648 ACATTTAGGGATTCCAACTGTTTCA 58.925 36.000 4.80 0.00 34.83 2.69
5085 5203 6.725834 ACATTTAGGGATTCCAACTGTTTCAT 59.274 34.615 4.80 0.00 34.83 2.57
5086 5204 7.235399 ACATTTAGGGATTCCAACTGTTTCATT 59.765 33.333 4.80 0.00 34.83 2.57
5087 5205 7.610580 TTTAGGGATTCCAACTGTTTCATTT 57.389 32.000 4.80 0.00 34.83 2.32
5088 5206 7.610580 TTAGGGATTCCAACTGTTTCATTTT 57.389 32.000 4.80 0.00 34.83 1.82
5089 5207 6.499106 AGGGATTCCAACTGTTTCATTTTT 57.501 33.333 4.80 0.00 34.83 1.94
5090 5208 7.610580 AGGGATTCCAACTGTTTCATTTTTA 57.389 32.000 4.80 0.00 34.83 1.52
5091 5209 8.206126 AGGGATTCCAACTGTTTCATTTTTAT 57.794 30.769 4.80 0.00 34.83 1.40
5092 5210 8.314021 AGGGATTCCAACTGTTTCATTTTTATC 58.686 33.333 4.80 0.00 34.83 1.75
5093 5211 8.314021 GGGATTCCAACTGTTTCATTTTTATCT 58.686 33.333 4.80 0.00 0.00 1.98
5119 5237 6.660887 TTTTTGAGCAAATCCAACTGTTTC 57.339 33.333 0.00 0.00 0.00 2.78
5120 5238 4.320608 TTGAGCAAATCCAACTGTTTCC 57.679 40.909 0.00 0.00 0.00 3.13
5121 5239 3.565307 TGAGCAAATCCAACTGTTTCCT 58.435 40.909 0.00 0.00 0.00 3.36
5122 5240 3.960102 TGAGCAAATCCAACTGTTTCCTT 59.040 39.130 0.00 0.00 0.00 3.36
5123 5241 4.037923 TGAGCAAATCCAACTGTTTCCTTC 59.962 41.667 0.00 0.00 0.00 3.46
5124 5242 3.960102 AGCAAATCCAACTGTTTCCTTCA 59.040 39.130 0.00 0.00 0.00 3.02
5125 5243 4.051237 GCAAATCCAACTGTTTCCTTCAC 58.949 43.478 0.00 0.00 0.00 3.18
5126 5244 4.441356 GCAAATCCAACTGTTTCCTTCACA 60.441 41.667 0.00 0.00 0.00 3.58
5127 5245 5.739935 GCAAATCCAACTGTTTCCTTCACAT 60.740 40.000 0.00 0.00 0.00 3.21
5128 5246 6.516527 GCAAATCCAACTGTTTCCTTCACATA 60.517 38.462 0.00 0.00 0.00 2.29
5129 5247 7.605449 CAAATCCAACTGTTTCCTTCACATAT 58.395 34.615 0.00 0.00 0.00 1.78
5130 5248 6.764308 ATCCAACTGTTTCCTTCACATATG 57.236 37.500 0.00 0.00 0.00 1.78
5131 5249 5.875224 TCCAACTGTTTCCTTCACATATGA 58.125 37.500 10.38 0.00 0.00 2.15
5132 5250 5.939883 TCCAACTGTTTCCTTCACATATGAG 59.060 40.000 10.38 0.87 35.83 2.90
5133 5251 5.939883 CCAACTGTTTCCTTCACATATGAGA 59.060 40.000 10.38 3.86 35.83 3.27
5134 5252 6.600822 CCAACTGTTTCCTTCACATATGAGAT 59.399 38.462 10.38 0.00 35.83 2.75
5135 5253 7.121759 CCAACTGTTTCCTTCACATATGAGATT 59.878 37.037 10.38 0.00 35.83 2.40
5136 5254 8.517878 CAACTGTTTCCTTCACATATGAGATTT 58.482 33.333 10.38 0.00 35.83 2.17
5137 5255 8.641498 ACTGTTTCCTTCACATATGAGATTTT 57.359 30.769 10.38 0.00 35.83 1.82
5138 5256 8.734386 ACTGTTTCCTTCACATATGAGATTTTC 58.266 33.333 10.38 0.00 35.83 2.29
5139 5257 8.868522 TGTTTCCTTCACATATGAGATTTTCT 57.131 30.769 10.38 0.00 35.83 2.52
5140 5258 8.950210 TGTTTCCTTCACATATGAGATTTTCTC 58.050 33.333 10.38 0.00 43.65 2.87
5141 5259 8.401709 GTTTCCTTCACATATGAGATTTTCTCC 58.598 37.037 10.38 0.00 42.73 3.71
5142 5260 7.199167 TCCTTCACATATGAGATTTTCTCCA 57.801 36.000 10.38 0.00 42.73 3.86
5143 5261 7.809238 TCCTTCACATATGAGATTTTCTCCAT 58.191 34.615 10.38 0.00 42.73 3.41
5144 5262 7.935755 TCCTTCACATATGAGATTTTCTCCATC 59.064 37.037 10.38 0.00 42.73 3.51
5145 5263 7.937942 CCTTCACATATGAGATTTTCTCCATCT 59.062 37.037 10.38 0.00 42.73 2.90
5146 5264 9.339850 CTTCACATATGAGATTTTCTCCATCTT 57.660 33.333 10.38 0.00 42.73 2.40
5147 5265 8.899427 TCACATATGAGATTTTCTCCATCTTC 57.101 34.615 10.38 0.00 42.73 2.87
5148 5266 8.488668 TCACATATGAGATTTTCTCCATCTTCA 58.511 33.333 10.38 0.00 42.73 3.02
5149 5267 9.286170 CACATATGAGATTTTCTCCATCTTCAT 57.714 33.333 10.38 0.00 42.73 2.57
5150 5268 9.863650 ACATATGAGATTTTCTCCATCTTCATT 57.136 29.630 10.38 0.00 42.73 2.57
5154 5272 8.743085 TGAGATTTTCTCCATCTTCATTAAGG 57.257 34.615 2.26 0.00 42.73 2.69
5155 5273 7.776969 TGAGATTTTCTCCATCTTCATTAAGGG 59.223 37.037 2.26 0.00 42.73 3.95
5156 5274 6.548993 AGATTTTCTCCATCTTCATTAAGGGC 59.451 38.462 0.00 0.00 33.22 5.19
5157 5275 3.864789 TCTCCATCTTCATTAAGGGCC 57.135 47.619 0.00 0.00 33.22 5.80
5158 5276 3.397527 TCTCCATCTTCATTAAGGGCCT 58.602 45.455 0.00 0.00 33.22 5.19
5159 5277 3.788142 TCTCCATCTTCATTAAGGGCCTT 59.212 43.478 24.44 24.44 33.22 4.35
5160 5278 4.140536 CTCCATCTTCATTAAGGGCCTTC 58.859 47.826 24.77 0.00 33.22 3.46
5161 5279 3.117512 TCCATCTTCATTAAGGGCCTTCC 60.118 47.826 24.77 0.00 33.22 3.46
5162 5280 2.710096 TCTTCATTAAGGGCCTTCCG 57.290 50.000 24.77 12.51 41.52 4.30
5163 5281 2.193127 TCTTCATTAAGGGCCTTCCGA 58.807 47.619 24.77 14.77 41.52 4.55
5164 5282 2.170607 TCTTCATTAAGGGCCTTCCGAG 59.829 50.000 24.77 14.31 41.52 4.63
5165 5283 1.874129 TCATTAAGGGCCTTCCGAGA 58.126 50.000 24.77 13.81 41.52 4.04
5166 5284 1.485066 TCATTAAGGGCCTTCCGAGAC 59.515 52.381 24.77 0.00 41.52 3.36
5167 5285 1.209504 CATTAAGGGCCTTCCGAGACA 59.790 52.381 24.77 0.00 41.52 3.41
5168 5286 1.580059 TTAAGGGCCTTCCGAGACAT 58.420 50.000 24.77 0.00 41.52 3.06
5169 5287 0.830648 TAAGGGCCTTCCGAGACATG 59.169 55.000 24.77 0.00 41.52 3.21
5170 5288 1.915078 AAGGGCCTTCCGAGACATGG 61.915 60.000 14.48 0.00 41.52 3.66
5171 5289 2.670148 GGGCCTTCCGAGACATGGT 61.670 63.158 0.84 0.00 0.00 3.55
5172 5290 1.450312 GGCCTTCCGAGACATGGTG 60.450 63.158 0.00 0.00 0.00 4.17
5173 5291 1.296715 GCCTTCCGAGACATGGTGT 59.703 57.895 0.00 0.00 0.00 4.16
5174 5292 0.535335 GCCTTCCGAGACATGGTGTA 59.465 55.000 0.00 0.00 0.00 2.90
5175 5293 1.739371 GCCTTCCGAGACATGGTGTAC 60.739 57.143 0.00 0.00 0.00 2.90
5176 5294 1.825474 CCTTCCGAGACATGGTGTACT 59.175 52.381 0.00 0.00 0.00 2.73
5177 5295 2.233922 CCTTCCGAGACATGGTGTACTT 59.766 50.000 0.00 0.00 0.00 2.24
5178 5296 3.306780 CCTTCCGAGACATGGTGTACTTT 60.307 47.826 0.00 0.00 0.00 2.66
5179 5297 4.315803 CTTCCGAGACATGGTGTACTTTT 58.684 43.478 0.00 0.00 0.00 2.27
5180 5298 4.345859 TCCGAGACATGGTGTACTTTTT 57.654 40.909 0.00 0.00 0.00 1.94
5201 5319 7.875327 TTTTTAGAATAGCCCAACATAGGTC 57.125 36.000 0.00 0.00 0.00 3.85
5202 5320 6.824958 TTTAGAATAGCCCAACATAGGTCT 57.175 37.500 0.00 0.00 0.00 3.85
5203 5321 6.824958 TTAGAATAGCCCAACATAGGTCTT 57.175 37.500 0.00 0.00 0.00 3.01
5204 5322 5.297569 AGAATAGCCCAACATAGGTCTTC 57.702 43.478 0.00 0.00 0.00 2.87
5205 5323 4.971924 AGAATAGCCCAACATAGGTCTTCT 59.028 41.667 0.00 0.00 0.00 2.85
5206 5324 5.430089 AGAATAGCCCAACATAGGTCTTCTT 59.570 40.000 0.00 0.00 0.00 2.52
5207 5325 3.356529 AGCCCAACATAGGTCTTCTTG 57.643 47.619 0.00 0.00 0.00 3.02
5208 5326 2.025887 AGCCCAACATAGGTCTTCTTGG 60.026 50.000 0.00 0.00 0.00 3.61
5209 5327 2.026262 GCCCAACATAGGTCTTCTTGGA 60.026 50.000 0.00 0.00 34.41 3.53
5210 5328 3.372025 GCCCAACATAGGTCTTCTTGGAT 60.372 47.826 0.00 0.00 34.41 3.41
5211 5329 4.860022 CCCAACATAGGTCTTCTTGGATT 58.140 43.478 0.00 0.00 34.41 3.01
5212 5330 5.631481 GCCCAACATAGGTCTTCTTGGATTA 60.631 44.000 0.00 0.00 34.41 1.75
5213 5331 6.058183 CCCAACATAGGTCTTCTTGGATTAG 58.942 44.000 0.00 0.00 34.41 1.73
5214 5332 6.353082 CCCAACATAGGTCTTCTTGGATTAGT 60.353 42.308 0.00 0.00 34.41 2.24
5215 5333 6.540189 CCAACATAGGTCTTCTTGGATTAGTG 59.460 42.308 0.00 0.00 34.41 2.74
5216 5334 6.240549 ACATAGGTCTTCTTGGATTAGTGG 57.759 41.667 0.00 0.00 0.00 4.00
5217 5335 3.636153 AGGTCTTCTTGGATTAGTGGC 57.364 47.619 0.00 0.00 0.00 5.01
5218 5336 3.185455 AGGTCTTCTTGGATTAGTGGCT 58.815 45.455 0.00 0.00 0.00 4.75
5219 5337 3.589288 AGGTCTTCTTGGATTAGTGGCTT 59.411 43.478 0.00 0.00 0.00 4.35
5220 5338 4.043435 AGGTCTTCTTGGATTAGTGGCTTT 59.957 41.667 0.00 0.00 0.00 3.51
5221 5339 4.767409 GGTCTTCTTGGATTAGTGGCTTTT 59.233 41.667 0.00 0.00 0.00 2.27
5222 5340 5.243954 GGTCTTCTTGGATTAGTGGCTTTTT 59.756 40.000 0.00 0.00 0.00 1.94
5245 5363 8.792830 TTTTAGAACATCTTGGATTAGTGGAG 57.207 34.615 0.00 0.00 0.00 3.86
5246 5364 5.365021 AGAACATCTTGGATTAGTGGAGG 57.635 43.478 0.00 0.00 0.00 4.30
5247 5365 5.032846 AGAACATCTTGGATTAGTGGAGGA 58.967 41.667 0.00 0.00 0.00 3.71
5248 5366 5.669447 AGAACATCTTGGATTAGTGGAGGAT 59.331 40.000 0.00 0.00 0.00 3.24
5249 5367 5.983333 ACATCTTGGATTAGTGGAGGATT 57.017 39.130 0.00 0.00 0.00 3.01
5250 5368 5.688807 ACATCTTGGATTAGTGGAGGATTG 58.311 41.667 0.00 0.00 0.00 2.67
5251 5369 4.778213 TCTTGGATTAGTGGAGGATTGG 57.222 45.455 0.00 0.00 0.00 3.16
5252 5370 3.459598 TCTTGGATTAGTGGAGGATTGGG 59.540 47.826 0.00 0.00 0.00 4.12
5253 5371 3.144068 TGGATTAGTGGAGGATTGGGA 57.856 47.619 0.00 0.00 0.00 4.37
5254 5372 3.680169 TGGATTAGTGGAGGATTGGGAT 58.320 45.455 0.00 0.00 0.00 3.85
5255 5373 4.838403 TGGATTAGTGGAGGATTGGGATA 58.162 43.478 0.00 0.00 0.00 2.59
5256 5374 4.846367 TGGATTAGTGGAGGATTGGGATAG 59.154 45.833 0.00 0.00 0.00 2.08
5257 5375 5.094387 GGATTAGTGGAGGATTGGGATAGA 58.906 45.833 0.00 0.00 0.00 1.98
5258 5376 5.728741 GGATTAGTGGAGGATTGGGATAGAT 59.271 44.000 0.00 0.00 0.00 1.98
5259 5377 6.216456 GGATTAGTGGAGGATTGGGATAGATT 59.784 42.308 0.00 0.00 0.00 2.40
5260 5378 4.989875 AGTGGAGGATTGGGATAGATTG 57.010 45.455 0.00 0.00 0.00 2.67
5261 5379 3.654806 AGTGGAGGATTGGGATAGATTGG 59.345 47.826 0.00 0.00 0.00 3.16
5262 5380 2.988859 TGGAGGATTGGGATAGATTGGG 59.011 50.000 0.00 0.00 0.00 4.12
5263 5381 2.291217 GGAGGATTGGGATAGATTGGGC 60.291 54.545 0.00 0.00 0.00 5.36
5264 5382 1.713078 AGGATTGGGATAGATTGGGCC 59.287 52.381 0.00 0.00 0.00 5.80
5265 5383 1.428912 GGATTGGGATAGATTGGGCCA 59.571 52.381 0.00 0.00 0.00 5.36
5266 5384 2.519013 GATTGGGATAGATTGGGCCAC 58.481 52.381 5.23 0.00 0.00 5.01
5267 5385 0.182537 TTGGGATAGATTGGGCCACG 59.817 55.000 5.23 0.00 0.00 4.94
5268 5386 1.600916 GGGATAGATTGGGCCACGC 60.601 63.158 5.23 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 2.509786 CATGCCATTTGCGCACCC 60.510 61.111 11.12 0.00 45.60 4.61
84 87 4.577693 GCTATTCAACATGCCATCTTCTCA 59.422 41.667 0.00 0.00 0.00 3.27
85 88 4.023365 GGCTATTCAACATGCCATCTTCTC 60.023 45.833 0.00 0.00 44.34 2.87
86 89 3.887716 GGCTATTCAACATGCCATCTTCT 59.112 43.478 0.00 0.00 44.34 2.85
87 90 4.234530 GGCTATTCAACATGCCATCTTC 57.765 45.455 0.00 0.00 44.34 2.87
93 96 4.261741 CCATAAGTGGCTATTCAACATGCC 60.262 45.833 0.00 0.00 45.10 4.40
94 97 4.580167 TCCATAAGTGGCTATTCAACATGC 59.420 41.667 0.00 0.00 45.63 4.06
95 98 5.240183 CCTCCATAAGTGGCTATTCAACATG 59.760 44.000 0.00 0.00 45.63 3.21
96 99 5.103940 ACCTCCATAAGTGGCTATTCAACAT 60.104 40.000 0.00 0.00 45.63 2.71
97 100 4.227300 ACCTCCATAAGTGGCTATTCAACA 59.773 41.667 0.00 0.00 45.63 3.33
98 101 4.576463 CACCTCCATAAGTGGCTATTCAAC 59.424 45.833 0.00 0.00 45.63 3.18
99 102 4.780815 CACCTCCATAAGTGGCTATTCAA 58.219 43.478 0.00 0.00 45.63 2.69
100 103 3.433598 GCACCTCCATAAGTGGCTATTCA 60.434 47.826 0.00 0.00 45.63 2.57
101 104 3.142174 GCACCTCCATAAGTGGCTATTC 58.858 50.000 0.00 0.00 45.63 1.75
102 105 2.780010 AGCACCTCCATAAGTGGCTATT 59.220 45.455 0.00 0.00 45.63 1.73
103 106 2.412591 AGCACCTCCATAAGTGGCTAT 58.587 47.619 0.00 0.00 45.63 2.97
104 107 1.879575 AGCACCTCCATAAGTGGCTA 58.120 50.000 0.00 0.00 45.63 3.93
105 108 0.995024 AAGCACCTCCATAAGTGGCT 59.005 50.000 0.00 0.00 45.63 4.75
106 109 1.098050 CAAGCACCTCCATAAGTGGC 58.902 55.000 0.00 0.00 45.63 5.01
108 111 2.744202 GTCACAAGCACCTCCATAAGTG 59.256 50.000 0.00 0.00 37.05 3.16
109 112 2.290323 GGTCACAAGCACCTCCATAAGT 60.290 50.000 0.00 0.00 0.00 2.24
110 113 2.359900 GGTCACAAGCACCTCCATAAG 58.640 52.381 0.00 0.00 0.00 1.73
111 114 1.338674 CGGTCACAAGCACCTCCATAA 60.339 52.381 0.00 0.00 0.00 1.90
112 115 0.249120 CGGTCACAAGCACCTCCATA 59.751 55.000 0.00 0.00 0.00 2.74
113 116 1.003355 CGGTCACAAGCACCTCCAT 60.003 57.895 0.00 0.00 0.00 3.41
124 127 2.135903 ATTGGGCATCACCGGTCACA 62.136 55.000 2.59 0.00 40.62 3.58
128 131 1.379843 GGAATTGGGCATCACCGGT 60.380 57.895 0.00 0.00 40.62 5.28
181 184 3.217743 GCTCCGACTCCTACCCCG 61.218 72.222 0.00 0.00 0.00 5.73
194 197 4.727507 ACCATATACATCGATCTGCTCC 57.272 45.455 0.00 0.00 0.00 4.70
195 198 5.734786 GCCTACCATATACATCGATCTGCTC 60.735 48.000 0.00 0.00 0.00 4.26
248 251 5.458041 AAAATTGTTCTCACATGGTCCAG 57.542 39.130 0.00 0.00 31.06 3.86
255 258 6.669125 TCCCATGAAAAATTGTTCTCACAT 57.331 33.333 9.75 0.00 31.06 3.21
301 306 5.437060 AGTATTCTTTTATGGCATGGTCGT 58.563 37.500 10.98 0.00 0.00 4.34
320 325 7.545965 CAGAAACTCCGTGTCTAATTTGAGTAT 59.454 37.037 0.00 0.00 33.05 2.12
336 341 2.732412 TCTCAGAAGCAGAAACTCCG 57.268 50.000 0.00 0.00 0.00 4.63
483 504 7.591426 AGTCTTTTTGAAGAATCGATTTTTCCG 59.409 33.333 28.59 16.43 31.89 4.30
509 530 9.251440 TCTCCAAATGCTTTAGAAGTACTAGTA 57.749 33.333 0.00 0.00 32.30 1.82
510 531 8.135382 TCTCCAAATGCTTTAGAAGTACTAGT 57.865 34.615 0.00 0.00 32.30 2.57
512 533 7.042335 GCTCTCCAAATGCTTTAGAAGTACTA 58.958 38.462 0.00 0.00 0.00 1.82
514 535 5.877564 AGCTCTCCAAATGCTTTAGAAGTAC 59.122 40.000 0.00 0.00 32.61 2.73
515 536 5.877012 CAGCTCTCCAAATGCTTTAGAAGTA 59.123 40.000 0.00 0.00 34.51 2.24
517 538 4.940046 TCAGCTCTCCAAATGCTTTAGAAG 59.060 41.667 0.00 0.00 34.51 2.85
520 541 5.124645 AGATCAGCTCTCCAAATGCTTTAG 58.875 41.667 0.00 0.00 34.51 1.85
542 566 5.989168 GTGGAGGTTTGGGAAAAATAACAAG 59.011 40.000 0.00 0.00 0.00 3.16
558 582 6.903516 TGATGAGATCATATTTGTGGAGGTT 58.096 36.000 0.00 0.00 36.57 3.50
598 622 6.903419 ACTAGCATTGCTTACTTTTCTGTTC 58.097 36.000 17.71 0.00 40.44 3.18
693 717 1.758936 TCAAATGCTCCTGCCATGAG 58.241 50.000 0.00 0.00 38.71 2.90
694 718 2.092049 AGATCAAATGCTCCTGCCATGA 60.092 45.455 0.00 0.00 38.71 3.07
695 719 2.307768 AGATCAAATGCTCCTGCCATG 58.692 47.619 0.00 0.00 38.71 3.66
696 720 2.750141 AGATCAAATGCTCCTGCCAT 57.250 45.000 0.00 0.00 38.71 4.40
697 721 2.519771 AAGATCAAATGCTCCTGCCA 57.480 45.000 0.00 0.00 38.71 4.92
698 722 3.813443 TCTAAGATCAAATGCTCCTGCC 58.187 45.455 0.00 0.00 38.71 4.85
699 723 6.388435 AATTCTAAGATCAAATGCTCCTGC 57.612 37.500 0.00 0.00 40.20 4.85
700 724 8.674263 ACTAATTCTAAGATCAAATGCTCCTG 57.326 34.615 0.00 0.00 0.00 3.86
701 725 9.995003 CTACTAATTCTAAGATCAAATGCTCCT 57.005 33.333 0.00 0.00 0.00 3.69
702 726 9.213799 CCTACTAATTCTAAGATCAAATGCTCC 57.786 37.037 0.00 0.00 0.00 4.70
703 727 9.988815 TCCTACTAATTCTAAGATCAAATGCTC 57.011 33.333 0.00 0.00 0.00 4.26
713 737 9.322769 ACTGAAGGTTTCCTACTAATTCTAAGA 57.677 33.333 0.00 0.00 31.13 2.10
714 738 9.945904 AACTGAAGGTTTCCTACTAATTCTAAG 57.054 33.333 0.00 0.00 33.90 2.18
715 739 9.939802 GAACTGAAGGTTTCCTACTAATTCTAA 57.060 33.333 0.00 0.00 38.41 2.10
716 740 9.096823 TGAACTGAAGGTTTCCTACTAATTCTA 57.903 33.333 0.00 0.00 38.41 2.10
717 741 7.974504 TGAACTGAAGGTTTCCTACTAATTCT 58.025 34.615 0.00 0.00 38.41 2.40
757 781 1.488957 GTGCAGCTCTCGTCAAACG 59.511 57.895 0.00 0.00 44.19 3.60
784 810 2.857152 GAGCATGTGATTCTCGTCTGAC 59.143 50.000 0.00 0.00 0.00 3.51
806 832 2.901042 GACAGGTGTCCCCCGATC 59.099 66.667 0.00 0.00 39.07 3.69
932 959 0.933047 GTGTTTTGCGAGTTTCCGGC 60.933 55.000 0.00 0.00 0.00 6.13
1062 1105 2.814835 GGTGTGGAACTCGTGGGGT 61.815 63.158 0.00 0.00 38.04 4.95
1136 1180 6.315091 TCTACTTCACTGTCTGTAAGTGTC 57.685 41.667 10.65 0.00 44.42 3.67
1556 1603 3.449018 TGCAGAGAGATCAAGGAAGGTAC 59.551 47.826 0.00 0.00 0.00 3.34
1557 1604 3.703556 CTGCAGAGAGATCAAGGAAGGTA 59.296 47.826 8.42 0.00 0.00 3.08
1558 1605 2.500910 CTGCAGAGAGATCAAGGAAGGT 59.499 50.000 8.42 0.00 0.00 3.50
1559 1606 2.500910 ACTGCAGAGAGATCAAGGAAGG 59.499 50.000 23.35 0.00 0.00 3.46
1560 1607 3.891422 ACTGCAGAGAGATCAAGGAAG 57.109 47.619 23.35 0.00 0.00 3.46
1561 1608 3.367806 CGAACTGCAGAGAGATCAAGGAA 60.368 47.826 23.35 0.00 0.00 3.36
1562 1609 2.165234 CGAACTGCAGAGAGATCAAGGA 59.835 50.000 23.35 0.00 0.00 3.36
1591 1638 2.986479 GCCATTTTTAACACCTTGAGCG 59.014 45.455 0.00 0.00 0.00 5.03
1595 1642 2.065512 GCCGCCATTTTTAACACCTTG 58.934 47.619 0.00 0.00 0.00 3.61
1616 1664 1.179152 TGCTTGTGCCAATCCATGAG 58.821 50.000 0.00 0.00 38.71 2.90
1622 1670 3.656559 AGAATTGTTGCTTGTGCCAATC 58.343 40.909 0.00 0.00 38.71 2.67
1651 1702 3.119245 TCCTAGTAAAGTTGCGCTACTGG 60.119 47.826 24.73 19.01 0.00 4.00
1667 1718 4.530161 AGCAGATCACAGACTTTTCCTAGT 59.470 41.667 0.00 0.00 0.00 2.57
1677 1728 0.463620 GGAGGGAGCAGATCACAGAC 59.536 60.000 0.00 0.00 31.63 3.51
1745 1796 9.268268 CCTTTAAAATGTGTCTACAACTCTACA 57.732 33.333 0.00 0.00 40.84 2.74
1746 1797 8.718734 CCCTTTAAAATGTGTCTACAACTCTAC 58.281 37.037 0.00 0.00 40.84 2.59
1748 1799 7.287810 ACCCTTTAAAATGTGTCTACAACTCT 58.712 34.615 0.00 0.00 40.84 3.24
1749 1800 7.506328 ACCCTTTAAAATGTGTCTACAACTC 57.494 36.000 0.00 0.00 40.84 3.01
1750 1801 8.434392 TCTACCCTTTAAAATGTGTCTACAACT 58.566 33.333 0.00 0.00 40.84 3.16
1751 1802 8.611654 TCTACCCTTTAAAATGTGTCTACAAC 57.388 34.615 0.00 0.00 40.84 3.32
1752 1803 9.802039 AATCTACCCTTTAAAATGTGTCTACAA 57.198 29.630 0.00 0.00 40.84 2.41
1753 1804 9.444600 GAATCTACCCTTTAAAATGTGTCTACA 57.555 33.333 0.00 0.00 41.89 2.74
1754 1805 9.444600 TGAATCTACCCTTTAAAATGTGTCTAC 57.555 33.333 0.00 0.00 0.00 2.59
1755 1806 9.444600 GTGAATCTACCCTTTAAAATGTGTCTA 57.555 33.333 0.00 0.00 0.00 2.59
1760 1811 7.166167 ACGAGTGAATCTACCCTTTAAAATGT 58.834 34.615 0.00 0.00 0.00 2.71
1771 1822 3.371285 GGAGCAAAACGAGTGAATCTACC 59.629 47.826 0.00 0.00 0.00 3.18
1784 1835 5.796350 ATGAACTACATACGGAGCAAAAC 57.204 39.130 0.00 0.00 37.46 2.43
1841 1893 7.786943 TGATTGATACTGAATTCTACTCCCTCT 59.213 37.037 7.05 0.00 0.00 3.69
1907 1960 5.419788 TGGAATATCACTTGCTGCAGAAAAT 59.580 36.000 20.43 0.00 0.00 1.82
1997 2050 1.068352 ATGGTAGGAAGGGGATGGCC 61.068 60.000 0.00 0.00 0.00 5.36
2010 2063 1.930503 TGCGCGTATCACAAATGGTAG 59.069 47.619 8.43 0.00 0.00 3.18
2167 2220 2.089980 AGCAAAATAGCTGTGCAGGAG 58.910 47.619 13.68 0.00 44.66 3.69
2170 2223 3.132629 CAGAGCAAAATAGCTGTGCAG 57.867 47.619 13.68 0.00 46.72 4.41
2177 2230 6.694411 CCATCATTACAACAGAGCAAAATAGC 59.306 38.462 0.00 0.00 0.00 2.97
2178 2231 7.988737 TCCATCATTACAACAGAGCAAAATAG 58.011 34.615 0.00 0.00 0.00 1.73
2180 2233 6.839124 TCCATCATTACAACAGAGCAAAAT 57.161 33.333 0.00 0.00 0.00 1.82
2186 2240 5.125900 TGCCAATTCCATCATTACAACAGAG 59.874 40.000 0.00 0.00 0.00 3.35
2241 2295 0.829990 TCACCTGTTCAGTGCTCACA 59.170 50.000 2.63 0.00 35.14 3.58
2242 2296 2.175878 ATCACCTGTTCAGTGCTCAC 57.824 50.000 0.00 0.00 35.14 3.51
2243 2297 2.899900 ACTATCACCTGTTCAGTGCTCA 59.100 45.455 0.00 0.00 35.14 4.26
2244 2298 3.601443 ACTATCACCTGTTCAGTGCTC 57.399 47.619 0.00 0.00 35.14 4.26
2245 2299 3.071602 ACAACTATCACCTGTTCAGTGCT 59.928 43.478 0.00 0.00 35.14 4.40
2246 2300 3.187227 CACAACTATCACCTGTTCAGTGC 59.813 47.826 0.00 0.00 35.14 4.40
2247 2301 3.187227 GCACAACTATCACCTGTTCAGTG 59.813 47.826 0.00 0.00 36.54 3.66
2248 2302 3.403038 GCACAACTATCACCTGTTCAGT 58.597 45.455 0.00 0.00 0.00 3.41
2249 2303 2.744202 GGCACAACTATCACCTGTTCAG 59.256 50.000 0.00 0.00 0.00 3.02
2298 2352 0.706433 ACCAAGTCAGCATGGGGATT 59.294 50.000 0.00 0.00 41.17 3.01
2334 2388 2.102578 AGCAGGCCAACACCAATAATC 58.897 47.619 5.01 0.00 0.00 1.75
2340 2394 0.698238 ATTCTAGCAGGCCAACACCA 59.302 50.000 5.01 0.00 0.00 4.17
2343 2397 1.026182 CGCATTCTAGCAGGCCAACA 61.026 55.000 5.01 0.00 0.00 3.33
2390 2444 3.676172 TGTAAGGAACACGACTAAATGCG 59.324 43.478 0.00 0.00 31.43 4.73
2484 2538 8.267894 ACTGTTGATAGCTACACAAAATAGGAT 58.732 33.333 14.15 0.00 0.00 3.24
2532 2586 3.448093 TGGTTGGACATTGCTATTGGA 57.552 42.857 0.00 0.00 0.00 3.53
2633 2687 9.734620 TCAAAATTATGTTCTTTGTCAAGACAG 57.265 29.630 2.87 0.00 42.94 3.51
2649 2703 9.158233 ACAGAGGATTGCAAAATCAAAATTATG 57.842 29.630 1.71 0.00 0.00 1.90
2690 2744 3.149196 AGAAATTCAGCACGTCACCAAT 58.851 40.909 0.00 0.00 0.00 3.16
2761 2815 7.203910 TGAACTTCTTCTTGTCTGTACTTCTC 58.796 38.462 0.00 0.00 0.00 2.87
2794 2848 6.769512 TCAGTTATGAACCTCAAAGCTAAGT 58.230 36.000 0.00 0.00 30.61 2.24
2844 2898 5.541953 AGATGATTACAGCAGCATAGTGA 57.458 39.130 0.00 0.00 34.60 3.41
2873 2927 3.756963 GTCAGTTAGGTGGTTCCCATTTC 59.243 47.826 0.00 0.00 35.28 2.17
2889 2944 3.769844 ACCTGAACGATAGATGGTCAGTT 59.230 43.478 7.21 0.00 41.38 3.16
2904 2959 0.668535 GCCACAACAAGGACCTGAAC 59.331 55.000 0.00 0.00 0.00 3.18
2937 2992 4.936891 ACATCTTTGAGCAAAAACCAGAC 58.063 39.130 0.00 0.00 0.00 3.51
2995 3050 1.950909 CCCAAAGCGTACCAAAAGTCA 59.049 47.619 0.00 0.00 0.00 3.41
3044 3099 1.080025 GACTCCGGTGTACAGTGCC 60.080 63.158 9.57 0.00 0.00 5.01
3080 3135 0.749454 GGCTAACCTCTGCCCACATG 60.749 60.000 0.00 0.00 43.11 3.21
3126 3181 7.678947 ATTAAACTTCTCCAGACTGTTCATG 57.321 36.000 0.93 0.00 0.00 3.07
3272 3329 4.425772 TGTCCCATCTTTCACCTAAGAGA 58.574 43.478 0.00 0.00 37.55 3.10
3364 3421 9.282247 GTCTGAATATCAAAATGCAACTACAAG 57.718 33.333 0.00 0.00 0.00 3.16
3405 3462 7.717436 TGTGACAGGTTAATATGAACACTTTCA 59.283 33.333 5.29 5.93 45.93 2.69
3425 3482 5.581126 AGCTTGAAGATTTTGTTGTGACA 57.419 34.783 0.00 0.00 0.00 3.58
3426 3483 7.166473 CAGTTAGCTTGAAGATTTTGTTGTGAC 59.834 37.037 0.00 0.00 0.00 3.67
3459 3516 4.763793 CACCTGATGAAAAGGATGTCAAGT 59.236 41.667 0.00 0.00 38.27 3.16
3592 3649 0.171455 CGACGGGGATAGCAGATAGC 59.829 60.000 0.00 0.00 46.19 2.97
3682 3739 5.904362 AAAGAGCACAGGAAATGGATAAC 57.096 39.130 0.00 0.00 0.00 1.89
3789 3849 1.899814 TGATGCGTTACTCCCTTGACT 59.100 47.619 0.00 0.00 0.00 3.41
3809 3869 4.154918 GCAATCTTGACACTTTCTTCGGAT 59.845 41.667 0.00 0.00 0.00 4.18
3813 3873 5.684626 CAGTTGCAATCTTGACACTTTCTTC 59.315 40.000 0.59 0.00 0.00 2.87
3818 3878 5.532406 ACATACAGTTGCAATCTTGACACTT 59.468 36.000 0.59 0.00 0.00 3.16
3821 3881 7.279981 GGTATACATACAGTTGCAATCTTGACA 59.720 37.037 0.59 0.00 34.98 3.58
3830 3898 7.445707 TCTTGTTTTGGTATACATACAGTTGCA 59.554 33.333 5.01 0.00 34.98 4.08
3844 3912 7.054124 CAGATATAAGGCCTCTTGTTTTGGTA 58.946 38.462 5.23 0.00 34.59 3.25
3899 3967 2.051345 CAAACGCCGGTTGCACTC 60.051 61.111 0.23 0.00 41.33 3.51
3930 3999 4.503817 CCTCCGAGATCATGGAATAGCAAA 60.504 45.833 7.29 0.00 32.89 3.68
3974 4044 7.460071 TCTCTAGTCACTAGTTAGTCCAGTTT 58.540 38.462 11.77 0.00 35.72 2.66
4059 4174 8.852430 GCTGTAGCATATACAAGGTAAACCACC 61.852 44.444 1.26 0.00 43.85 4.61
4060 4175 6.018180 GCTGTAGCATATACAAGGTAAACCAC 60.018 42.308 1.26 0.00 41.59 4.16
4061 4176 6.053005 GCTGTAGCATATACAAGGTAAACCA 58.947 40.000 1.26 0.00 41.59 3.67
4062 4177 6.541111 GCTGTAGCATATACAAGGTAAACC 57.459 41.667 0.00 0.00 41.59 3.27
4096 4211 9.248291 CAATGTTACCATTTATATTGCCACTTC 57.752 33.333 0.00 0.00 39.28 3.01
4107 4222 9.693739 TGGAATCTACACAATGTTACCATTTAT 57.306 29.630 0.00 0.00 39.28 1.40
4108 4223 9.693739 ATGGAATCTACACAATGTTACCATTTA 57.306 29.630 0.00 0.00 39.28 1.40
4149 4267 9.330063 CCTTCACTATCATCTTTGCTATGTTAA 57.670 33.333 0.00 0.00 0.00 2.01
4150 4268 8.704668 TCCTTCACTATCATCTTTGCTATGTTA 58.295 33.333 0.00 0.00 0.00 2.41
4151 4269 7.568349 TCCTTCACTATCATCTTTGCTATGTT 58.432 34.615 0.00 0.00 0.00 2.71
4154 4272 9.717942 GTAATCCTTCACTATCATCTTTGCTAT 57.282 33.333 0.00 0.00 0.00 2.97
4806 4924 9.733556 AGTACATAACTACAAAATGGAACATGA 57.266 29.630 0.00 0.00 39.41 3.07
4809 4927 9.787435 AGAAGTACATAACTACAAAATGGAACA 57.213 29.630 0.00 0.00 40.00 3.18
4850 4968 8.827677 GCGTCTGAAGAAATAATAATGTAAGGT 58.172 33.333 0.00 0.00 0.00 3.50
4851 4969 8.826710 TGCGTCTGAAGAAATAATAATGTAAGG 58.173 33.333 0.00 0.00 0.00 2.69
4855 4973 8.487970 CGTATGCGTCTGAAGAAATAATAATGT 58.512 33.333 0.00 0.00 0.00 2.71
4856 4974 8.850884 CGTATGCGTCTGAAGAAATAATAATG 57.149 34.615 0.00 0.00 0.00 1.90
4874 4992 3.615056 TCCAAAGTCATGTAACGTATGCG 59.385 43.478 0.19 0.19 44.93 4.73
4875 4993 5.539582 TTCCAAAGTCATGTAACGTATGC 57.460 39.130 0.00 0.00 0.00 3.14
4876 4994 5.965334 GCATTCCAAAGTCATGTAACGTATG 59.035 40.000 0.00 0.00 0.00 2.39
4877 4995 5.645929 TGCATTCCAAAGTCATGTAACGTAT 59.354 36.000 0.00 0.00 0.00 3.06
4878 4996 4.998033 TGCATTCCAAAGTCATGTAACGTA 59.002 37.500 0.00 0.00 0.00 3.57
4879 4997 3.818210 TGCATTCCAAAGTCATGTAACGT 59.182 39.130 0.00 0.00 0.00 3.99
4880 4998 4.418013 TGCATTCCAAAGTCATGTAACG 57.582 40.909 0.00 0.00 0.00 3.18
4881 4999 5.858581 GTCTTGCATTCCAAAGTCATGTAAC 59.141 40.000 0.00 0.00 31.94 2.50
4882 5000 5.534278 TGTCTTGCATTCCAAAGTCATGTAA 59.466 36.000 0.00 0.00 31.94 2.41
4883 5001 5.048782 GTGTCTTGCATTCCAAAGTCATGTA 60.049 40.000 0.00 0.00 31.94 2.29
4884 5002 3.890756 TGTCTTGCATTCCAAAGTCATGT 59.109 39.130 0.00 0.00 31.94 3.21
4885 5003 4.232221 GTGTCTTGCATTCCAAAGTCATG 58.768 43.478 0.00 0.00 31.94 3.07
4886 5004 3.890756 TGTGTCTTGCATTCCAAAGTCAT 59.109 39.130 0.00 0.00 31.94 3.06
4887 5005 3.286353 TGTGTCTTGCATTCCAAAGTCA 58.714 40.909 0.00 0.00 31.94 3.41
4888 5006 3.988379 TGTGTCTTGCATTCCAAAGTC 57.012 42.857 0.00 0.00 31.94 3.01
4889 5007 6.594788 ATTATGTGTCTTGCATTCCAAAGT 57.405 33.333 0.00 0.00 31.94 2.66
4890 5008 7.894376 AAATTATGTGTCTTGCATTCCAAAG 57.106 32.000 0.00 0.00 31.94 2.77
4891 5009 7.930325 TGAAAATTATGTGTCTTGCATTCCAAA 59.070 29.630 0.00 0.00 31.94 3.28
4892 5010 7.440198 TGAAAATTATGTGTCTTGCATTCCAA 58.560 30.769 0.00 0.00 0.00 3.53
4893 5011 6.990798 TGAAAATTATGTGTCTTGCATTCCA 58.009 32.000 0.00 0.00 0.00 3.53
4894 5012 7.464977 GCATGAAAATTATGTGTCTTGCATTCC 60.465 37.037 0.00 0.00 39.60 3.01
4895 5013 7.277098 AGCATGAAAATTATGTGTCTTGCATTC 59.723 33.333 0.00 0.00 41.26 2.67
4896 5014 7.101054 AGCATGAAAATTATGTGTCTTGCATT 58.899 30.769 0.00 0.00 41.26 3.56
4897 5015 6.636705 AGCATGAAAATTATGTGTCTTGCAT 58.363 32.000 0.00 0.00 41.26 3.96
4898 5016 6.028146 AGCATGAAAATTATGTGTCTTGCA 57.972 33.333 0.00 0.00 41.26 4.08
4899 5017 6.956299 AAGCATGAAAATTATGTGTCTTGC 57.044 33.333 0.00 0.00 39.92 4.01
4954 5072 8.070171 GCGAAGTATGCATTTTATGACTTACAT 58.930 33.333 3.54 0.00 42.39 2.29
4955 5073 7.065204 TGCGAAGTATGCATTTTATGACTTACA 59.935 33.333 3.54 6.68 37.44 2.41
4956 5074 7.406553 TGCGAAGTATGCATTTTATGACTTAC 58.593 34.615 3.54 4.19 37.44 2.34
4957 5075 7.546778 TGCGAAGTATGCATTTTATGACTTA 57.453 32.000 3.54 0.00 37.44 2.24
4958 5076 6.435430 TGCGAAGTATGCATTTTATGACTT 57.565 33.333 3.54 7.30 37.44 3.01
4970 5088 1.016627 TGGCTCAATGCGAAGTATGC 58.983 50.000 0.00 0.00 44.05 3.14
4971 5089 3.136763 AGATGGCTCAATGCGAAGTATG 58.863 45.455 0.00 0.00 44.05 2.39
4972 5090 3.482156 AGATGGCTCAATGCGAAGTAT 57.518 42.857 0.00 0.00 44.05 2.12
4973 5091 2.988010 AGATGGCTCAATGCGAAGTA 57.012 45.000 0.00 0.00 44.05 2.24
4974 5092 2.169352 AGTAGATGGCTCAATGCGAAGT 59.831 45.455 0.00 0.00 44.05 3.01
4975 5093 2.831333 AGTAGATGGCTCAATGCGAAG 58.169 47.619 0.00 0.00 44.05 3.79
4976 5094 2.988010 AGTAGATGGCTCAATGCGAA 57.012 45.000 0.00 0.00 44.05 4.70
4977 5095 2.483714 GGAAGTAGATGGCTCAATGCGA 60.484 50.000 0.00 0.00 44.05 5.10
4978 5096 1.869767 GGAAGTAGATGGCTCAATGCG 59.130 52.381 0.00 0.00 44.05 4.73
4979 5097 2.923121 TGGAAGTAGATGGCTCAATGC 58.077 47.619 0.00 0.00 41.94 3.56
4980 5098 7.572523 TTTTATGGAAGTAGATGGCTCAATG 57.427 36.000 0.00 0.00 0.00 2.82
4981 5099 7.255730 GCATTTTATGGAAGTAGATGGCTCAAT 60.256 37.037 0.00 0.00 0.00 2.57
4982 5100 6.039717 GCATTTTATGGAAGTAGATGGCTCAA 59.960 38.462 0.00 0.00 0.00 3.02
4983 5101 5.532406 GCATTTTATGGAAGTAGATGGCTCA 59.468 40.000 0.00 0.00 0.00 4.26
4984 5102 5.532406 TGCATTTTATGGAAGTAGATGGCTC 59.468 40.000 0.00 0.00 0.00 4.70
4985 5103 5.448654 TGCATTTTATGGAAGTAGATGGCT 58.551 37.500 0.00 0.00 0.00 4.75
4986 5104 5.772825 TGCATTTTATGGAAGTAGATGGC 57.227 39.130 0.00 0.00 0.00 4.40
4987 5105 8.199449 ACAATTGCATTTTATGGAAGTAGATGG 58.801 33.333 5.05 0.00 43.84 3.51
4988 5106 9.590451 AACAATTGCATTTTATGGAAGTAGATG 57.410 29.630 5.05 0.00 43.84 2.90
4989 5107 9.807649 GAACAATTGCATTTTATGGAAGTAGAT 57.192 29.630 5.05 0.00 43.84 1.98
4990 5108 8.250332 GGAACAATTGCATTTTATGGAAGTAGA 58.750 33.333 5.05 0.00 43.84 2.59
4991 5109 8.034215 TGGAACAATTGCATTTTATGGAAGTAG 58.966 33.333 5.05 0.00 43.84 2.57
4992 5110 7.901029 TGGAACAATTGCATTTTATGGAAGTA 58.099 30.769 5.05 0.00 43.84 2.24
4993 5111 6.767456 TGGAACAATTGCATTTTATGGAAGT 58.233 32.000 5.05 0.00 43.84 3.01
5016 5134 5.920193 TCCCTAAATTTCTGCCAAGATTG 57.080 39.130 0.00 0.00 30.72 2.67
5017 5135 6.098838 GGAATCCCTAAATTTCTGCCAAGATT 59.901 38.462 0.00 0.00 30.72 2.40
5018 5136 5.600069 GGAATCCCTAAATTTCTGCCAAGAT 59.400 40.000 0.00 0.00 30.72 2.40
5019 5137 4.956075 GGAATCCCTAAATTTCTGCCAAGA 59.044 41.667 0.00 0.00 0.00 3.02
5020 5138 4.711355 TGGAATCCCTAAATTTCTGCCAAG 59.289 41.667 0.00 0.00 0.00 3.61
5021 5139 4.682563 TGGAATCCCTAAATTTCTGCCAA 58.317 39.130 0.00 0.00 0.00 4.52
5022 5140 4.329638 TGGAATCCCTAAATTTCTGCCA 57.670 40.909 0.00 0.00 0.00 4.92
5023 5141 4.711846 AGTTGGAATCCCTAAATTTCTGCC 59.288 41.667 0.00 0.00 0.00 4.85
5024 5142 5.921962 AGTTGGAATCCCTAAATTTCTGC 57.078 39.130 0.00 0.00 0.00 4.26
5025 5143 7.709149 AGAAGTTGGAATCCCTAAATTTCTG 57.291 36.000 7.48 0.00 0.00 3.02
5026 5144 8.727100 AAAGAAGTTGGAATCCCTAAATTTCT 57.273 30.769 0.00 0.00 0.00 2.52
5027 5145 9.778741 AAAAAGAAGTTGGAATCCCTAAATTTC 57.221 29.630 0.00 0.00 0.00 2.17
5051 5169 9.936759 GTTGGAATCCCTAAATGTTCATAAAAA 57.063 29.630 0.00 0.00 0.00 1.94
5052 5170 9.320295 AGTTGGAATCCCTAAATGTTCATAAAA 57.680 29.630 0.00 0.00 0.00 1.52
5053 5171 8.748412 CAGTTGGAATCCCTAAATGTTCATAAA 58.252 33.333 0.00 0.00 0.00 1.40
5054 5172 7.893302 ACAGTTGGAATCCCTAAATGTTCATAA 59.107 33.333 0.00 0.00 32.25 1.90
5055 5173 7.410174 ACAGTTGGAATCCCTAAATGTTCATA 58.590 34.615 0.00 0.00 32.25 2.15
5056 5174 6.256053 ACAGTTGGAATCCCTAAATGTTCAT 58.744 36.000 0.00 0.00 32.25 2.57
5057 5175 5.640147 ACAGTTGGAATCCCTAAATGTTCA 58.360 37.500 0.00 0.00 32.25 3.18
5058 5176 6.590234 AACAGTTGGAATCCCTAAATGTTC 57.410 37.500 10.94 0.00 37.27 3.18
5059 5177 6.553100 TGAAACAGTTGGAATCCCTAAATGTT 59.447 34.615 10.94 10.94 40.19 2.71
5060 5178 6.074648 TGAAACAGTTGGAATCCCTAAATGT 58.925 36.000 0.00 0.00 35.18 2.71
5061 5179 6.588719 TGAAACAGTTGGAATCCCTAAATG 57.411 37.500 0.00 0.00 0.00 2.32
5062 5180 7.797121 AATGAAACAGTTGGAATCCCTAAAT 57.203 32.000 0.00 0.00 0.00 1.40
5063 5181 7.610580 AAATGAAACAGTTGGAATCCCTAAA 57.389 32.000 0.00 0.00 0.00 1.85
5064 5182 7.610580 AAAATGAAACAGTTGGAATCCCTAA 57.389 32.000 0.00 0.00 0.00 2.69
5065 5183 7.610580 AAAAATGAAACAGTTGGAATCCCTA 57.389 32.000 0.00 0.00 0.00 3.53
5066 5184 6.499106 AAAAATGAAACAGTTGGAATCCCT 57.501 33.333 0.00 0.00 0.00 4.20
5067 5185 8.314021 AGATAAAAATGAAACAGTTGGAATCCC 58.686 33.333 0.00 0.00 0.00 3.85
5096 5214 5.584251 GGAAACAGTTGGATTTGCTCAAAAA 59.416 36.000 0.00 0.00 33.56 1.94
5097 5215 5.104982 AGGAAACAGTTGGATTTGCTCAAAA 60.105 36.000 0.00 0.00 31.62 2.44
5098 5216 4.405358 AGGAAACAGTTGGATTTGCTCAAA 59.595 37.500 0.00 0.00 31.62 2.69
5099 5217 3.960102 AGGAAACAGTTGGATTTGCTCAA 59.040 39.130 0.00 0.00 31.62 3.02
5100 5218 3.565307 AGGAAACAGTTGGATTTGCTCA 58.435 40.909 0.00 0.00 31.62 4.26
5101 5219 4.037923 TGAAGGAAACAGTTGGATTTGCTC 59.962 41.667 0.00 0.00 35.68 4.26
5102 5220 3.960102 TGAAGGAAACAGTTGGATTTGCT 59.040 39.130 0.00 0.00 38.01 3.91
5103 5221 4.051237 GTGAAGGAAACAGTTGGATTTGC 58.949 43.478 0.00 0.00 0.00 3.68
5104 5222 5.261209 TGTGAAGGAAACAGTTGGATTTG 57.739 39.130 0.00 0.00 0.00 2.32
5105 5223 7.451255 TCATATGTGAAGGAAACAGTTGGATTT 59.549 33.333 1.90 0.00 0.00 2.17
5106 5224 6.947733 TCATATGTGAAGGAAACAGTTGGATT 59.052 34.615 1.90 0.00 0.00 3.01
5107 5225 6.484288 TCATATGTGAAGGAAACAGTTGGAT 58.516 36.000 1.90 0.00 0.00 3.41
5108 5226 5.875224 TCATATGTGAAGGAAACAGTTGGA 58.125 37.500 1.90 0.00 0.00 3.53
5109 5227 5.939883 TCTCATATGTGAAGGAAACAGTTGG 59.060 40.000 5.01 0.00 33.05 3.77
5110 5228 7.621428 ATCTCATATGTGAAGGAAACAGTTG 57.379 36.000 11.26 0.00 33.05 3.16
5111 5229 8.641498 AAATCTCATATGTGAAGGAAACAGTT 57.359 30.769 11.26 0.00 33.05 3.16
5112 5230 8.641498 AAAATCTCATATGTGAAGGAAACAGT 57.359 30.769 11.26 0.00 33.05 3.55
5113 5231 8.954350 AGAAAATCTCATATGTGAAGGAAACAG 58.046 33.333 11.26 0.00 33.05 3.16
5114 5232 8.868522 AGAAAATCTCATATGTGAAGGAAACA 57.131 30.769 11.26 0.00 33.05 2.83
5115 5233 8.401709 GGAGAAAATCTCATATGTGAAGGAAAC 58.598 37.037 11.26 3.60 45.12 2.78
5116 5234 8.108999 TGGAGAAAATCTCATATGTGAAGGAAA 58.891 33.333 11.26 0.00 45.12 3.13
5117 5235 7.632861 TGGAGAAAATCTCATATGTGAAGGAA 58.367 34.615 11.26 0.00 45.12 3.36
5118 5236 7.199167 TGGAGAAAATCTCATATGTGAAGGA 57.801 36.000 11.26 0.76 45.12 3.36
5119 5237 7.937942 AGATGGAGAAAATCTCATATGTGAAGG 59.062 37.037 11.26 0.00 45.12 3.46
5120 5238 8.905660 AGATGGAGAAAATCTCATATGTGAAG 57.094 34.615 11.26 0.00 45.12 3.02
5121 5239 9.334947 GAAGATGGAGAAAATCTCATATGTGAA 57.665 33.333 11.26 0.00 45.12 3.18
5122 5240 8.488668 TGAAGATGGAGAAAATCTCATATGTGA 58.511 33.333 9.76 9.76 45.12 3.58
5123 5241 8.672823 TGAAGATGGAGAAAATCTCATATGTG 57.327 34.615 9.40 0.00 45.12 3.21
5124 5242 9.863650 AATGAAGATGGAGAAAATCTCATATGT 57.136 29.630 9.40 0.11 45.12 2.29
5128 5246 9.352191 CCTTAATGAAGATGGAGAAAATCTCAT 57.648 33.333 9.40 1.87 38.89 2.90
5129 5247 7.776969 CCCTTAATGAAGATGGAGAAAATCTCA 59.223 37.037 9.40 0.00 38.89 3.27
5130 5248 7.255416 GCCCTTAATGAAGATGGAGAAAATCTC 60.255 40.741 0.00 0.00 37.55 2.75
5131 5249 6.548993 GCCCTTAATGAAGATGGAGAAAATCT 59.451 38.462 0.00 0.00 35.89 2.40
5132 5250 6.239148 GGCCCTTAATGAAGATGGAGAAAATC 60.239 42.308 0.00 0.00 34.25 2.17
5133 5251 5.600069 GGCCCTTAATGAAGATGGAGAAAAT 59.400 40.000 0.00 0.00 34.25 1.82
5134 5252 4.956075 GGCCCTTAATGAAGATGGAGAAAA 59.044 41.667 0.00 0.00 34.25 2.29
5135 5253 4.230502 AGGCCCTTAATGAAGATGGAGAAA 59.769 41.667 0.00 0.00 34.25 2.52
5136 5254 3.788142 AGGCCCTTAATGAAGATGGAGAA 59.212 43.478 0.00 0.00 34.25 2.87
5137 5255 3.397527 AGGCCCTTAATGAAGATGGAGA 58.602 45.455 0.00 0.00 34.25 3.71
5138 5256 3.872459 AGGCCCTTAATGAAGATGGAG 57.128 47.619 0.00 0.00 34.25 3.86
5139 5257 3.117512 GGAAGGCCCTTAATGAAGATGGA 60.118 47.826 0.00 0.00 34.25 3.41
5140 5258 3.225940 GGAAGGCCCTTAATGAAGATGG 58.774 50.000 0.00 0.00 34.25 3.51
5141 5259 2.880890 CGGAAGGCCCTTAATGAAGATG 59.119 50.000 0.00 0.00 34.25 2.90
5142 5260 2.777692 TCGGAAGGCCCTTAATGAAGAT 59.222 45.455 0.00 0.00 34.25 2.40
5143 5261 2.170607 CTCGGAAGGCCCTTAATGAAGA 59.829 50.000 0.00 0.00 34.25 2.87
5144 5262 2.170607 TCTCGGAAGGCCCTTAATGAAG 59.829 50.000 0.00 0.00 0.00 3.02
5145 5263 2.093128 GTCTCGGAAGGCCCTTAATGAA 60.093 50.000 0.00 0.00 0.00 2.57
5146 5264 1.485066 GTCTCGGAAGGCCCTTAATGA 59.515 52.381 0.00 0.00 0.00 2.57
5147 5265 1.209504 TGTCTCGGAAGGCCCTTAATG 59.790 52.381 0.00 0.00 0.00 1.90
5148 5266 1.580059 TGTCTCGGAAGGCCCTTAAT 58.420 50.000 0.00 0.00 0.00 1.40
5149 5267 1.209504 CATGTCTCGGAAGGCCCTTAA 59.790 52.381 0.00 0.00 0.00 1.85
5150 5268 0.830648 CATGTCTCGGAAGGCCCTTA 59.169 55.000 0.00 0.00 0.00 2.69
5151 5269 1.604378 CATGTCTCGGAAGGCCCTT 59.396 57.895 0.00 0.00 0.00 3.95
5152 5270 2.370445 CCATGTCTCGGAAGGCCCT 61.370 63.158 0.00 0.00 0.00 5.19
5153 5271 2.190578 CCATGTCTCGGAAGGCCC 59.809 66.667 0.00 0.00 0.00 5.80
5154 5272 1.450312 CACCATGTCTCGGAAGGCC 60.450 63.158 0.00 0.00 0.00 5.19
5155 5273 0.535335 TACACCATGTCTCGGAAGGC 59.465 55.000 0.00 0.00 0.00 4.35
5156 5274 1.825474 AGTACACCATGTCTCGGAAGG 59.175 52.381 0.00 0.00 0.00 3.46
5157 5275 3.594603 AAGTACACCATGTCTCGGAAG 57.405 47.619 0.00 0.00 0.00 3.46
5158 5276 4.345859 AAAAGTACACCATGTCTCGGAA 57.654 40.909 0.00 0.00 0.00 4.30
5159 5277 4.345859 AAAAAGTACACCATGTCTCGGA 57.654 40.909 0.00 0.00 0.00 4.55
5177 5295 7.639378 AGACCTATGTTGGGCTATTCTAAAAA 58.361 34.615 0.00 0.00 45.24 1.94
5178 5296 7.208064 AGACCTATGTTGGGCTATTCTAAAA 57.792 36.000 0.00 0.00 45.24 1.52
5179 5297 6.824958 AGACCTATGTTGGGCTATTCTAAA 57.175 37.500 0.00 0.00 45.24 1.85
5180 5298 6.615726 AGAAGACCTATGTTGGGCTATTCTAA 59.384 38.462 0.00 0.00 46.66 2.10
5181 5299 6.143915 AGAAGACCTATGTTGGGCTATTCTA 58.856 40.000 0.00 0.00 46.66 2.10
5182 5300 4.971924 AGAAGACCTATGTTGGGCTATTCT 59.028 41.667 0.00 0.00 46.66 2.40
5183 5301 5.297569 AGAAGACCTATGTTGGGCTATTC 57.702 43.478 0.00 0.00 46.66 1.75
5184 5302 5.440610 CAAGAAGACCTATGTTGGGCTATT 58.559 41.667 0.00 0.00 46.66 1.73
5185 5303 4.141390 CCAAGAAGACCTATGTTGGGCTAT 60.141 45.833 0.00 0.00 46.66 2.97
5186 5304 3.199946 CCAAGAAGACCTATGTTGGGCTA 59.800 47.826 0.00 0.00 46.66 3.93
5188 5306 2.026262 TCCAAGAAGACCTATGTTGGGC 60.026 50.000 3.06 0.00 38.58 5.36
5189 5307 4.510167 ATCCAAGAAGACCTATGTTGGG 57.490 45.455 3.06 0.00 38.58 4.12
5190 5308 6.540189 CACTAATCCAAGAAGACCTATGTTGG 59.460 42.308 0.00 0.00 39.28 3.77
5191 5309 6.540189 CCACTAATCCAAGAAGACCTATGTTG 59.460 42.308 0.00 0.00 0.00 3.33
5192 5310 6.653989 CCACTAATCCAAGAAGACCTATGTT 58.346 40.000 0.00 0.00 0.00 2.71
5193 5311 5.396884 GCCACTAATCCAAGAAGACCTATGT 60.397 44.000 0.00 0.00 0.00 2.29
5194 5312 5.059833 GCCACTAATCCAAGAAGACCTATG 58.940 45.833 0.00 0.00 0.00 2.23
5195 5313 4.971924 AGCCACTAATCCAAGAAGACCTAT 59.028 41.667 0.00 0.00 0.00 2.57
5196 5314 4.362677 AGCCACTAATCCAAGAAGACCTA 58.637 43.478 0.00 0.00 0.00 3.08
5197 5315 3.185455 AGCCACTAATCCAAGAAGACCT 58.815 45.455 0.00 0.00 0.00 3.85
5198 5316 3.636153 AGCCACTAATCCAAGAAGACC 57.364 47.619 0.00 0.00 0.00 3.85
5199 5317 5.966742 AAAAGCCACTAATCCAAGAAGAC 57.033 39.130 0.00 0.00 0.00 3.01
5219 5337 9.231297 CTCCACTAATCCAAGATGTTCTAAAAA 57.769 33.333 0.00 0.00 0.00 1.94
5220 5338 7.829211 CCTCCACTAATCCAAGATGTTCTAAAA 59.171 37.037 0.00 0.00 0.00 1.52
5221 5339 7.182026 TCCTCCACTAATCCAAGATGTTCTAAA 59.818 37.037 0.00 0.00 0.00 1.85
5222 5340 6.672218 TCCTCCACTAATCCAAGATGTTCTAA 59.328 38.462 0.00 0.00 0.00 2.10
5223 5341 6.202331 TCCTCCACTAATCCAAGATGTTCTA 58.798 40.000 0.00 0.00 0.00 2.10
5224 5342 5.032846 TCCTCCACTAATCCAAGATGTTCT 58.967 41.667 0.00 0.00 0.00 3.01
5225 5343 5.359194 TCCTCCACTAATCCAAGATGTTC 57.641 43.478 0.00 0.00 0.00 3.18
5226 5344 5.983333 ATCCTCCACTAATCCAAGATGTT 57.017 39.130 0.00 0.00 0.00 2.71
5227 5345 5.398353 CCAATCCTCCACTAATCCAAGATGT 60.398 44.000 0.00 0.00 0.00 3.06
5228 5346 5.068636 CCAATCCTCCACTAATCCAAGATG 58.931 45.833 0.00 0.00 0.00 2.90
5229 5347 4.105377 CCCAATCCTCCACTAATCCAAGAT 59.895 45.833 0.00 0.00 0.00 2.40
5230 5348 3.459598 CCCAATCCTCCACTAATCCAAGA 59.540 47.826 0.00 0.00 0.00 3.02
5231 5349 3.459598 TCCCAATCCTCCACTAATCCAAG 59.540 47.826 0.00 0.00 0.00 3.61
5232 5350 3.469859 TCCCAATCCTCCACTAATCCAA 58.530 45.455 0.00 0.00 0.00 3.53
5233 5351 3.144068 TCCCAATCCTCCACTAATCCA 57.856 47.619 0.00 0.00 0.00 3.41
5234 5352 5.094387 TCTATCCCAATCCTCCACTAATCC 58.906 45.833 0.00 0.00 0.00 3.01
5235 5353 6.882768 ATCTATCCCAATCCTCCACTAATC 57.117 41.667 0.00 0.00 0.00 1.75
5236 5354 6.012157 CCAATCTATCCCAATCCTCCACTAAT 60.012 42.308 0.00 0.00 0.00 1.73
5237 5355 5.310594 CCAATCTATCCCAATCCTCCACTAA 59.689 44.000 0.00 0.00 0.00 2.24
5238 5356 4.846367 CCAATCTATCCCAATCCTCCACTA 59.154 45.833 0.00 0.00 0.00 2.74
5239 5357 3.654806 CCAATCTATCCCAATCCTCCACT 59.345 47.826 0.00 0.00 0.00 4.00
5240 5358 3.245052 CCCAATCTATCCCAATCCTCCAC 60.245 52.174 0.00 0.00 0.00 4.02
5241 5359 2.988859 CCCAATCTATCCCAATCCTCCA 59.011 50.000 0.00 0.00 0.00 3.86
5242 5360 2.291217 GCCCAATCTATCCCAATCCTCC 60.291 54.545 0.00 0.00 0.00 4.30
5243 5361 2.291217 GGCCCAATCTATCCCAATCCTC 60.291 54.545 0.00 0.00 0.00 3.71
5244 5362 1.713078 GGCCCAATCTATCCCAATCCT 59.287 52.381 0.00 0.00 0.00 3.24
5245 5363 1.428912 TGGCCCAATCTATCCCAATCC 59.571 52.381 0.00 0.00 0.00 3.01
5246 5364 2.519013 GTGGCCCAATCTATCCCAATC 58.481 52.381 0.00 0.00 0.00 2.67
5247 5365 1.202927 CGTGGCCCAATCTATCCCAAT 60.203 52.381 0.00 0.00 0.00 3.16
5248 5366 0.182537 CGTGGCCCAATCTATCCCAA 59.817 55.000 0.00 0.00 0.00 4.12
5249 5367 1.836391 CGTGGCCCAATCTATCCCA 59.164 57.895 0.00 0.00 0.00 4.37
5250 5368 1.600916 GCGTGGCCCAATCTATCCC 60.601 63.158 0.00 0.00 0.00 3.85
5251 5369 1.600916 GGCGTGGCCCAATCTATCC 60.601 63.158 0.00 0.00 44.06 2.59
5252 5370 4.065110 GGCGTGGCCCAATCTATC 57.935 61.111 0.00 0.00 44.06 2.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.