Multiple sequence alignment - TraesCS4A01G268600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G268600 chr4A 100.000 9911 0 0 1 9911 580904002 580894092 0.000000e+00 18303.0
1 TraesCS4A01G268600 chr4A 77.226 483 98 11 424 898 737179005 737178527 1.270000e-68 272.0
2 TraesCS4A01G268600 chr4A 95.789 95 2 1 5522 5614 712733710 712733804 1.720000e-32 152.0
3 TraesCS4A01G268600 chr4B 95.765 4652 148 24 332 4951 32810794 32815428 0.000000e+00 7454.0
4 TraesCS4A01G268600 chr4B 96.304 2462 80 10 6770 9224 32817689 32820146 0.000000e+00 4032.0
5 TraesCS4A01G268600 chr4B 96.684 1176 29 5 5605 6771 32816391 32817565 0.000000e+00 1947.0
6 TraesCS4A01G268600 chr4B 97.569 576 9 2 4952 5523 32815818 32816392 0.000000e+00 981.0
7 TraesCS4A01G268600 chr4B 93.007 429 24 3 9486 9908 32820254 32820682 1.090000e-173 621.0
8 TraesCS4A01G268600 chr4D 95.967 3521 73 23 928 4404 21883424 21879929 0.000000e+00 5651.0
9 TraesCS4A01G268600 chr4D 96.236 2577 74 13 6667 9226 21877397 21874827 0.000000e+00 4200.0
10 TraesCS4A01G268600 chr4D 96.519 833 22 4 5605 6437 21878245 21877420 0.000000e+00 1371.0
11 TraesCS4A01G268600 chr4D 98.252 572 10 0 4952 5523 21878815 21878244 0.000000e+00 1002.0
12 TraesCS4A01G268600 chr4D 97.876 565 4 2 4391 4951 21879749 21879189 0.000000e+00 970.0
13 TraesCS4A01G268600 chr4D 90.121 496 42 4 9412 9905 21874812 21874322 1.090000e-178 638.0
14 TraesCS4A01G268600 chr4D 84.799 546 70 9 105 639 21883996 21883453 4.070000e-148 536.0
15 TraesCS4A01G268600 chr4D 91.429 105 8 1 5503 5606 182071820 182071716 1.040000e-29 143.0
16 TraesCS4A01G268600 chr4D 94.253 87 4 1 9226 9311 466837141 466837227 2.250000e-26 132.0
17 TraesCS4A01G268600 chr4D 88.542 96 8 3 805 898 461877756 461877850 8.140000e-21 113.0
18 TraesCS4A01G268600 chr3B 77.480 635 122 14 265 885 55113141 55113768 2.630000e-95 361.0
19 TraesCS4A01G268600 chr3B 95.745 94 4 0 5520 5613 132527385 132527292 1.720000e-32 152.0
20 TraesCS4A01G268600 chr3B 94.000 100 4 2 5521 5618 623657649 623657550 6.200000e-32 150.0
21 TraesCS4A01G268600 chr3B 95.833 48 2 0 9342 9389 498409108 498409061 2.970000e-10 78.7
22 TraesCS4A01G268600 chr2B 81.637 452 53 8 7127 7577 378136943 378136521 2.050000e-91 348.0
23 TraesCS4A01G268600 chr2B 83.916 286 36 2 7284 7569 760870210 760870485 2.120000e-66 265.0
24 TraesCS4A01G268600 chr2B 73.817 634 147 17 270 897 69439944 69440564 5.990000e-57 233.0
25 TraesCS4A01G268600 chr2B 93.182 88 5 1 9227 9313 632381000 632380913 2.910000e-25 128.0
26 TraesCS4A01G268600 chr2B 94.286 70 2 2 7927 7996 384186181 384186114 1.360000e-18 106.0
27 TraesCS4A01G268600 chr2B 79.851 134 27 0 507 640 7649428 7649295 2.280000e-16 99.0
28 TraesCS4A01G268600 chr3A 76.499 617 133 9 278 885 16154644 16154031 9.600000e-85 326.0
29 TraesCS4A01G268600 chr3A 91.489 94 6 2 9228 9320 529615959 529615867 2.910000e-25 128.0
30 TraesCS4A01G268600 chr3D 76.206 622 126 18 290 899 56293500 56294111 9.670000e-80 309.0
31 TraesCS4A01G268600 chr3D 76.045 622 126 19 290 899 56280741 56281351 1.620000e-77 302.0
32 TraesCS4A01G268600 chr3D 75.923 623 127 19 290 899 56307191 56307803 2.090000e-76 298.0
33 TraesCS4A01G268600 chr3D 96.739 92 3 0 5522 5613 509255197 509255106 4.790000e-33 154.0
34 TraesCS4A01G268600 chr3D 75.155 322 66 12 568 885 132163189 132163500 1.340000e-28 139.0
35 TraesCS4A01G268600 chr1D 86.166 253 33 1 7327 7579 263402731 263402481 1.270000e-68 272.0
36 TraesCS4A01G268600 chr1D 81.731 312 49 8 7285 7595 192767016 192766712 4.590000e-63 254.0
37 TraesCS4A01G268600 chr1D 73.150 581 129 20 337 898 30226061 30226633 6.110000e-42 183.0
38 TraesCS4A01G268600 chr1D 92.135 89 5 2 9228 9315 483382934 483383021 3.760000e-24 124.0
39 TraesCS4A01G268600 chr1D 89.691 97 8 2 9226 9321 415688444 415688349 1.350000e-23 122.0
40 TraesCS4A01G268600 chr1D 78.488 172 27 10 7189 7359 263402905 263402743 4.900000e-18 104.0
41 TraesCS4A01G268600 chr1D 81.818 121 19 3 768 886 309578602 309578483 2.280000e-16 99.0
42 TraesCS4A01G268600 chr7B 79.012 405 66 13 7160 7558 528922017 528922408 9.880000e-65 259.0
43 TraesCS4A01G268600 chr7B 80.511 313 53 8 7285 7595 394909586 394909280 5.990000e-57 233.0
44 TraesCS4A01G268600 chr7B 89.796 98 9 1 9226 9322 642265869 642265966 3.760000e-24 124.0
45 TraesCS4A01G268600 chr7B 87.619 105 10 3 9226 9328 458512083 458511980 1.750000e-22 119.0
46 TraesCS4A01G268600 chr7B 73.094 223 52 5 505 726 407186955 407186740 1.380000e-08 73.1
47 TraesCS4A01G268600 chr6B 76.522 460 97 10 433 885 44082068 44081613 3.580000e-59 241.0
48 TraesCS4A01G268600 chr6B 75.720 486 107 9 418 900 711880382 711879905 5.990000e-57 233.0
49 TraesCS4A01G268600 chr6B 95.745 94 4 0 5521 5614 96970759 96970852 1.720000e-32 152.0
50 TraesCS4A01G268600 chr6B 90.667 75 6 1 7923 7996 14541148 14541074 2.280000e-16 99.0
51 TraesCS4A01G268600 chr1B 74.757 618 114 21 279 885 25119617 25120203 1.290000e-58 239.0
52 TraesCS4A01G268600 chr1B 94.949 99 5 0 5515 5613 164770359 164770457 1.330000e-33 156.0
53 TraesCS4A01G268600 chr1B 92.857 70 2 1 7930 7996 491239654 491239723 2.280000e-16 99.0
54 TraesCS4A01G268600 chr2D 80.060 331 52 13 7267 7595 554698763 554699081 5.990000e-57 233.0
55 TraesCS4A01G268600 chr2D 84.259 108 17 0 761 868 99724227 99724120 1.360000e-18 106.0
56 TraesCS4A01G268600 chr2D 91.667 72 2 2 7930 7997 327614827 327614898 8.190000e-16 97.1
57 TraesCS4A01G268600 chr2A 80.192 313 50 7 7285 7595 44167607 44167305 3.600000e-54 224.0
58 TraesCS4A01G268600 chr2A 87.805 82 4 3 7924 7999 754039093 754039012 3.810000e-14 91.6
59 TraesCS4A01G268600 chr6D 83.019 212 32 3 690 898 10719147 10719357 1.310000e-43 189.0
60 TraesCS4A01G268600 chr6D 80.717 223 39 4 678 897 466624795 466624574 4.760000e-38 171.0
61 TraesCS4A01G268600 chr6D 88.350 103 8 4 9226 9324 27308699 27308597 4.860000e-23 121.0
62 TraesCS4A01G268600 chr6D 79.459 185 26 11 676 853 27844502 27844323 4.860000e-23 121.0
63 TraesCS4A01G268600 chr6A 77.705 305 61 7 587 888 562805146 562805446 7.910000e-41 180.0
64 TraesCS4A01G268600 chr6A 88.462 78 5 3 7928 8002 460643436 460643360 3.810000e-14 91.6
65 TraesCS4A01G268600 chr7D 73.070 531 124 18 279 798 236187773 236187251 4.760000e-38 171.0
66 TraesCS4A01G268600 chr7D 97.802 91 2 0 5521 5611 506141454 506141364 3.710000e-34 158.0
67 TraesCS4A01G268600 chr7D 93.000 100 7 0 5521 5620 579751263 579751362 8.020000e-31 147.0
68 TraesCS4A01G268600 chr7D 80.117 171 29 5 732 898 177995389 177995558 1.350000e-23 122.0
69 TraesCS4A01G268600 chr1A 75.080 313 69 7 586 896 82721819 82721514 4.830000e-28 137.0
70 TraesCS4A01G268600 chr1A 90.789 76 4 3 7924 7996 6430017 6430092 2.280000e-16 99.0
71 TraesCS4A01G268600 chr5B 88.889 99 7 4 9224 9319 241165150 241165053 1.750000e-22 119.0
72 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 183903586 183903647 4.930000e-13 87.9
73 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 235136329 235136268 4.930000e-13 87.9
74 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 240848028 240848089 4.930000e-13 87.9
75 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 260027442 260027503 4.930000e-13 87.9
76 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 277811402 277811341 4.930000e-13 87.9
77 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 362478687 362478748 4.930000e-13 87.9
78 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 395778596 395778535 4.930000e-13 87.9
79 TraesCS4A01G268600 chrUn 91.935 62 5 0 824 885 397613164 397613225 4.930000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G268600 chr4A 580894092 580904002 9910 True 18303.000000 18303 100.000000 1 9911 1 chr4A.!!$R1 9910
1 TraesCS4A01G268600 chr4B 32810794 32820682 9888 False 3007.000000 7454 95.865800 332 9908 5 chr4B.!!$F1 9576
2 TraesCS4A01G268600 chr4D 21874322 21883996 9674 True 2052.571429 5651 94.252857 105 9905 7 chr4D.!!$R2 9800
3 TraesCS4A01G268600 chr3B 55113141 55113768 627 False 361.000000 361 77.480000 265 885 1 chr3B.!!$F1 620
4 TraesCS4A01G268600 chr2B 69439944 69440564 620 False 233.000000 233 73.817000 270 897 1 chr2B.!!$F1 627
5 TraesCS4A01G268600 chr3A 16154031 16154644 613 True 326.000000 326 76.499000 278 885 1 chr3A.!!$R1 607
6 TraesCS4A01G268600 chr3D 56293500 56294111 611 False 309.000000 309 76.206000 290 899 1 chr3D.!!$F2 609
7 TraesCS4A01G268600 chr3D 56280741 56281351 610 False 302.000000 302 76.045000 290 899 1 chr3D.!!$F1 609
8 TraesCS4A01G268600 chr3D 56307191 56307803 612 False 298.000000 298 75.923000 290 899 1 chr3D.!!$F3 609
9 TraesCS4A01G268600 chr1B 25119617 25120203 586 False 239.000000 239 74.757000 279 885 1 chr1B.!!$F1 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 777 0.106619 ATAGGGGAACGACGAGAGCT 60.107 55.000 0.00 0.00 0.00 4.09 F
1440 1494 0.179174 GGGTTTTGCACTAATCGCGG 60.179 55.000 6.13 0.00 0.00 6.46 F
1498 1552 0.892755 CCACCTGCATGCAAATCTGT 59.107 50.000 22.88 10.81 0.00 3.41 F
1859 1915 1.018752 TTGTCATGCCACGTGATCGG 61.019 55.000 19.30 0.05 41.85 4.18 F
3135 3204 3.317711 TGGTTTTGATGTTCTGCACGAAT 59.682 39.130 0.00 0.00 33.45 3.34 F
5137 5828 1.536766 TCGGACATTTGACGACGTACT 59.463 47.619 0.00 0.00 0.00 2.73 F
5605 6300 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59 F
5770 6468 0.107945 CTTCTTGAGGAAGCCGGGAG 60.108 60.000 2.18 0.00 43.88 4.30 F
7004 7840 0.109132 GGACCGTTTCCGTACACGAT 60.109 55.000 2.76 0.00 43.02 3.73 F
7938 8775 2.035632 CCACTGAGATGTACTCCCTCC 58.964 57.143 0.00 0.00 44.34 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1703 1759 2.632028 ACATGGCCTATGCACAAAAACA 59.368 40.909 3.32 0.00 40.59 2.83 R
3135 3204 1.478916 TCGACTGTGAAACTGACACCA 59.521 47.619 0.00 0.00 39.30 4.17 R
3274 3343 3.930634 ATGAGCCTTCTGAAACTTTGC 57.069 42.857 0.00 0.00 0.00 3.68 R
3411 3491 4.695455 TGTCTAAAAAGCAGTATCAGTGGC 59.305 41.667 0.00 0.00 0.00 5.01 R
5144 5835 7.009179 AGTTCAAGTTCAGATCCAGTTGATA 57.991 36.000 7.79 0.18 33.36 2.15 R
6200 6904 2.083774 TCGCCATAAGTGAAGCCAAAG 58.916 47.619 0.00 0.00 30.08 2.77 R
6558 7262 2.092646 TGGTTAACACAGACCACTTGCT 60.093 45.455 8.10 0.00 40.85 3.91 R
7206 8043 4.500389 ATCTCCTCAGTTCCTGGGATAT 57.500 45.455 0.00 0.00 32.95 1.63 R
8657 9504 0.034337 TTCTCGAGACCAAAACCCCG 59.966 55.000 16.36 0.00 0.00 5.73 R
9803 10658 0.107897 TCGCTGTTGGTGTCACTTGT 60.108 50.000 2.35 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.695851 ATTTGGTGTCATGTTCTTCAGAC 57.304 39.130 0.00 0.00 0.00 3.51
24 25 3.126001 TGGTGTCATGTTCTTCAGACC 57.874 47.619 0.00 0.00 0.00 3.85
25 26 2.437651 TGGTGTCATGTTCTTCAGACCA 59.562 45.455 0.00 0.00 0.00 4.02
26 27 3.118075 TGGTGTCATGTTCTTCAGACCAA 60.118 43.478 0.00 0.00 29.33 3.67
27 28 4.074970 GGTGTCATGTTCTTCAGACCAAT 58.925 43.478 0.00 0.00 0.00 3.16
28 29 4.520492 GGTGTCATGTTCTTCAGACCAATT 59.480 41.667 0.00 0.00 0.00 2.32
29 30 5.335191 GGTGTCATGTTCTTCAGACCAATTC 60.335 44.000 0.00 0.00 0.00 2.17
30 31 4.452114 TGTCATGTTCTTCAGACCAATTCG 59.548 41.667 0.00 0.00 0.00 3.34
31 32 4.690748 GTCATGTTCTTCAGACCAATTCGA 59.309 41.667 0.00 0.00 0.00 3.71
32 33 5.179368 GTCATGTTCTTCAGACCAATTCGAA 59.821 40.000 0.00 0.00 0.00 3.71
33 34 5.409520 TCATGTTCTTCAGACCAATTCGAAG 59.590 40.000 3.35 0.00 36.76 3.79
34 35 4.065088 TGTTCTTCAGACCAATTCGAAGG 58.935 43.478 3.35 2.60 36.41 3.46
35 36 4.065789 GTTCTTCAGACCAATTCGAAGGT 58.934 43.478 8.72 8.72 41.83 3.50
36 37 4.351874 TCTTCAGACCAATTCGAAGGTT 57.648 40.909 10.17 0.00 38.50 3.50
37 38 4.714632 TCTTCAGACCAATTCGAAGGTTT 58.285 39.130 10.17 2.51 38.50 3.27
38 39 5.860611 TCTTCAGACCAATTCGAAGGTTTA 58.139 37.500 10.17 0.00 38.50 2.01
39 40 6.292923 TCTTCAGACCAATTCGAAGGTTTAA 58.707 36.000 10.17 5.25 38.50 1.52
40 41 6.940298 TCTTCAGACCAATTCGAAGGTTTAAT 59.060 34.615 10.17 0.00 38.50 1.40
41 42 6.494893 TCAGACCAATTCGAAGGTTTAATG 57.505 37.500 10.17 7.71 38.50 1.90
42 43 6.234920 TCAGACCAATTCGAAGGTTTAATGA 58.765 36.000 10.17 9.46 38.50 2.57
43 44 6.884295 TCAGACCAATTCGAAGGTTTAATGAT 59.116 34.615 10.17 0.00 38.50 2.45
44 45 6.968904 CAGACCAATTCGAAGGTTTAATGATG 59.031 38.462 10.17 0.00 38.50 3.07
45 46 6.884295 AGACCAATTCGAAGGTTTAATGATGA 59.116 34.615 10.17 0.00 38.50 2.92
46 47 6.852664 ACCAATTCGAAGGTTTAATGATGAC 58.147 36.000 3.35 0.00 33.39 3.06
47 48 5.965334 CCAATTCGAAGGTTTAATGATGACG 59.035 40.000 3.35 0.00 0.00 4.35
48 49 6.183360 CCAATTCGAAGGTTTAATGATGACGA 60.183 38.462 3.35 0.00 0.00 4.20
49 50 5.773239 TTCGAAGGTTTAATGATGACGAC 57.227 39.130 0.00 0.00 0.00 4.34
50 51 5.068234 TCGAAGGTTTAATGATGACGACT 57.932 39.130 0.00 0.00 0.00 4.18
51 52 5.475719 TCGAAGGTTTAATGATGACGACTT 58.524 37.500 0.00 0.00 0.00 3.01
52 53 5.575606 TCGAAGGTTTAATGATGACGACTTC 59.424 40.000 0.00 0.00 0.00 3.01
53 54 5.347635 CGAAGGTTTAATGATGACGACTTCA 59.652 40.000 5.99 5.99 39.11 3.02
54 55 6.128661 CGAAGGTTTAATGATGACGACTTCAA 60.129 38.462 7.47 0.00 37.92 2.69
55 56 6.481954 AGGTTTAATGATGACGACTTCAAC 57.518 37.500 7.47 2.18 37.92 3.18
56 57 6.231211 AGGTTTAATGATGACGACTTCAACT 58.769 36.000 7.47 1.95 37.92 3.16
57 58 6.710744 AGGTTTAATGATGACGACTTCAACTT 59.289 34.615 7.47 2.23 37.92 2.66
58 59 7.228706 AGGTTTAATGATGACGACTTCAACTTT 59.771 33.333 7.47 1.63 37.92 2.66
59 60 8.500773 GGTTTAATGATGACGACTTCAACTTTA 58.499 33.333 7.47 0.81 37.92 1.85
60 61 9.530129 GTTTAATGATGACGACTTCAACTTTAG 57.470 33.333 7.47 0.00 37.92 1.85
61 62 6.727824 AATGATGACGACTTCAACTTTAGG 57.272 37.500 7.47 0.00 37.92 2.69
62 63 4.566004 TGATGACGACTTCAACTTTAGGG 58.434 43.478 1.22 0.00 37.92 3.53
63 64 2.762745 TGACGACTTCAACTTTAGGGC 58.237 47.619 0.00 0.00 0.00 5.19
64 65 1.725164 GACGACTTCAACTTTAGGGCG 59.275 52.381 0.00 0.00 0.00 6.13
65 66 0.442699 CGACTTCAACTTTAGGGCGC 59.557 55.000 0.00 0.00 0.00 6.53
66 67 0.803117 GACTTCAACTTTAGGGCGCC 59.197 55.000 21.18 21.18 0.00 6.53
67 68 0.109723 ACTTCAACTTTAGGGCGCCA 59.890 50.000 30.85 5.28 0.00 5.69
68 69 1.243902 CTTCAACTTTAGGGCGCCAA 58.756 50.000 30.85 12.67 0.00 4.52
69 70 1.818674 CTTCAACTTTAGGGCGCCAAT 59.181 47.619 30.85 19.07 0.00 3.16
70 71 1.459450 TCAACTTTAGGGCGCCAATC 58.541 50.000 30.85 11.48 0.00 2.67
71 72 0.455815 CAACTTTAGGGCGCCAATCC 59.544 55.000 30.85 11.04 0.00 3.01
72 73 0.331616 AACTTTAGGGCGCCAATCCT 59.668 50.000 30.85 18.57 37.18 3.24
73 74 0.331616 ACTTTAGGGCGCCAATCCTT 59.668 50.000 30.85 4.66 34.75 3.36
74 75 1.562475 ACTTTAGGGCGCCAATCCTTA 59.438 47.619 30.85 6.93 34.75 2.69
75 76 1.947456 CTTTAGGGCGCCAATCCTTAC 59.053 52.381 30.85 8.01 34.75 2.34
76 77 0.913205 TTAGGGCGCCAATCCTTACA 59.087 50.000 30.85 0.00 34.75 2.41
77 78 0.468226 TAGGGCGCCAATCCTTACAG 59.532 55.000 30.85 0.00 34.75 2.74
78 79 1.077716 GGGCGCCAATCCTTACAGT 60.078 57.895 30.85 0.00 0.00 3.55
79 80 1.095807 GGGCGCCAATCCTTACAGTC 61.096 60.000 30.85 0.98 0.00 3.51
80 81 0.392461 GGCGCCAATCCTTACAGTCA 60.392 55.000 24.80 0.00 0.00 3.41
81 82 0.727398 GCGCCAATCCTTACAGTCAC 59.273 55.000 0.00 0.00 0.00 3.67
82 83 1.943968 GCGCCAATCCTTACAGTCACA 60.944 52.381 0.00 0.00 0.00 3.58
83 84 2.632377 CGCCAATCCTTACAGTCACAT 58.368 47.619 0.00 0.00 0.00 3.21
84 85 2.352651 CGCCAATCCTTACAGTCACATG 59.647 50.000 0.00 0.00 0.00 3.21
85 86 3.347216 GCCAATCCTTACAGTCACATGT 58.653 45.455 0.00 0.00 37.19 3.21
86 87 3.127548 GCCAATCCTTACAGTCACATGTG 59.872 47.826 20.18 20.18 34.56 3.21
87 88 3.127548 CCAATCCTTACAGTCACATGTGC 59.872 47.826 21.38 15.51 34.56 4.57
88 89 3.701205 ATCCTTACAGTCACATGTGCA 57.299 42.857 21.38 7.40 34.56 4.57
89 90 2.766313 TCCTTACAGTCACATGTGCAC 58.234 47.619 21.38 18.24 34.56 4.57
90 91 2.103941 TCCTTACAGTCACATGTGCACA 59.896 45.455 24.08 24.08 34.56 4.57
91 92 2.481568 CCTTACAGTCACATGTGCACAG 59.518 50.000 25.84 18.42 34.56 3.66
92 93 3.392882 CTTACAGTCACATGTGCACAGA 58.607 45.455 25.84 14.30 34.56 3.41
93 94 2.330440 ACAGTCACATGTGCACAGAA 57.670 45.000 25.84 7.39 30.46 3.02
94 95 2.216046 ACAGTCACATGTGCACAGAAG 58.784 47.619 25.84 18.77 30.46 2.85
95 96 2.216046 CAGTCACATGTGCACAGAAGT 58.784 47.619 25.84 19.42 0.00 3.01
96 97 2.222678 CAGTCACATGTGCACAGAAGTC 59.777 50.000 25.84 14.57 0.00 3.01
97 98 2.103771 AGTCACATGTGCACAGAAGTCT 59.896 45.455 25.84 16.47 0.00 3.24
98 99 2.478134 GTCACATGTGCACAGAAGTCTC 59.522 50.000 25.84 13.30 0.00 3.36
99 100 1.458445 CACATGTGCACAGAAGTCTCG 59.542 52.381 25.84 8.20 0.00 4.04
100 101 1.341209 ACATGTGCACAGAAGTCTCGA 59.659 47.619 25.84 0.00 0.00 4.04
101 102 1.723542 CATGTGCACAGAAGTCTCGAC 59.276 52.381 25.84 0.00 0.00 4.20
102 103 0.744281 TGTGCACAGAAGTCTCGACA 59.256 50.000 17.42 0.00 0.00 4.35
103 104 1.132588 GTGCACAGAAGTCTCGACAC 58.867 55.000 13.17 0.00 0.00 3.67
113 114 0.933509 GTCTCGACACGTCAACGCTT 60.934 55.000 1.81 0.00 44.43 4.68
114 115 0.587768 TCTCGACACGTCAACGCTTA 59.412 50.000 1.81 0.00 44.43 3.09
138 139 3.007290 TCTGTGGTTCAGAGACCTCAATG 59.993 47.826 0.00 0.00 46.77 2.82
143 144 3.760684 GGTTCAGAGACCTCAATGCATTT 59.239 43.478 9.83 0.00 36.73 2.32
149 150 8.125978 TCAGAGACCTCAATGCATTTTTATTT 57.874 30.769 9.83 0.00 0.00 1.40
151 152 9.211485 CAGAGACCTCAATGCATTTTTATTTTT 57.789 29.630 9.83 0.00 0.00 1.94
171 172 5.843673 TTTTTGATGTGCTTTGTACCTCA 57.156 34.783 0.00 0.00 0.00 3.86
172 173 6.403866 TTTTTGATGTGCTTTGTACCTCAT 57.596 33.333 0.00 0.00 0.00 2.90
173 174 5.375417 TTTGATGTGCTTTGTACCTCATG 57.625 39.130 0.00 0.00 0.00 3.07
174 175 4.284829 TGATGTGCTTTGTACCTCATGA 57.715 40.909 0.00 0.00 0.00 3.07
175 176 4.847198 TGATGTGCTTTGTACCTCATGAT 58.153 39.130 0.00 0.00 0.00 2.45
176 177 5.255687 TGATGTGCTTTGTACCTCATGATT 58.744 37.500 0.00 0.00 0.00 2.57
206 211 7.227910 TCGTAAATAAAACCCTAGATGGAATGC 59.772 37.037 0.00 0.00 38.35 3.56
208 213 7.588497 AAATAAAACCCTAGATGGAATGCTC 57.412 36.000 0.00 0.00 38.35 4.26
233 238 9.715121 TCACCGTGTCTTTTAAAATACTTCTAT 57.285 29.630 15.10 0.00 0.00 1.98
257 262 3.909086 AAGGCTCTCGCAACCTGCC 62.909 63.158 0.00 0.00 41.12 4.85
277 282 1.743252 GGTGCAAGGCTTCCTCTCG 60.743 63.158 0.00 0.00 30.89 4.04
341 347 0.321122 CAAACTTCGCCAGAGAGCCT 60.321 55.000 0.00 0.00 0.00 4.58
397 404 1.617947 CCGGTGGAGGGAAGAGGAAG 61.618 65.000 0.00 0.00 0.00 3.46
501 513 5.642063 TCTTCTTTGAGTTTGTCTTTCGTGT 59.358 36.000 0.00 0.00 0.00 4.49
547 559 0.392461 TGGACGTAGCCAATGAAGCC 60.392 55.000 0.00 0.00 34.31 4.35
656 670 7.781693 AGATATATGCAAGGGTTCAACAAAGAT 59.218 33.333 0.00 0.00 0.00 2.40
667 681 0.889186 AACAAAGATGACCGCGGCTT 60.889 50.000 28.58 17.79 0.00 4.35
669 683 2.100631 AAAGATGACCGCGGCTTCG 61.101 57.895 28.58 0.11 0.00 3.79
685 699 0.178897 TTCGGGGTCCTGGTCCTTAA 60.179 55.000 9.84 0.03 0.00 1.85
754 773 1.604755 CTCAGATAGGGGAACGACGAG 59.395 57.143 0.00 0.00 0.00 4.18
758 777 0.106619 ATAGGGGAACGACGAGAGCT 60.107 55.000 0.00 0.00 0.00 4.09
1072 1106 2.882927 TCACATATACTCACCGCACC 57.117 50.000 0.00 0.00 0.00 5.01
1440 1494 0.179174 GGGTTTTGCACTAATCGCGG 60.179 55.000 6.13 0.00 0.00 6.46
1458 1512 2.805099 GCGGCTGGAGAGATCTTAATTG 59.195 50.000 0.00 0.00 0.00 2.32
1489 1543 3.056678 TGCTTACATTTTCCACCTGCATG 60.057 43.478 0.00 0.00 0.00 4.06
1498 1552 0.892755 CCACCTGCATGCAAATCTGT 59.107 50.000 22.88 10.81 0.00 3.41
1508 1562 5.125900 TGCATGCAAATCTGTTACTAGCATT 59.874 36.000 20.30 0.00 39.00 3.56
1589 1645 5.955355 AGACCAAGTAGCTTCAGTAGAGAAT 59.045 40.000 0.00 0.00 0.00 2.40
1753 1809 5.496387 CACTCTACATCATTCGAACAATGC 58.504 41.667 17.24 0.00 0.00 3.56
1859 1915 1.018752 TTGTCATGCCACGTGATCGG 61.019 55.000 19.30 0.05 41.85 4.18
2058 2114 9.042008 TGTTGTCTCTTGTACAATTTAGACTTC 57.958 33.333 28.09 23.23 38.95 3.01
2384 2440 5.118286 ACTCTCTACCGTAGCTTCTCTAAC 58.882 45.833 0.00 0.00 0.00 2.34
2477 2540 8.686334 CACCAATACTTAATATCTTGCCTTGTT 58.314 33.333 0.00 0.00 0.00 2.83
2714 2777 3.739300 GTCACGTGTTAACACTAGTGCAT 59.261 43.478 30.47 14.21 44.34 3.96
2735 2798 5.586243 GCATATCAGAGTTAGCAACTTTGGA 59.414 40.000 14.85 8.83 42.21 3.53
3131 3200 3.988379 TCTGGTTTTGATGTTCTGCAC 57.012 42.857 0.00 0.00 0.00 4.57
3135 3204 3.317711 TGGTTTTGATGTTCTGCACGAAT 59.682 39.130 0.00 0.00 33.45 3.34
3274 3343 3.634568 TGGCCGTATTGTTCTTGTTTG 57.365 42.857 0.00 0.00 0.00 2.93
3289 3358 5.410067 TCTTGTTTGCAAAGTTTCAGAAGG 58.590 37.500 13.26 0.10 33.73 3.46
3324 3397 7.865706 TCATGATAGAAAACTTAAGCCCTTC 57.134 36.000 1.29 3.25 0.00 3.46
3325 3398 7.633789 TCATGATAGAAAACTTAAGCCCTTCT 58.366 34.615 14.97 14.97 0.00 2.85
3326 3399 8.109634 TCATGATAGAAAACTTAAGCCCTTCTT 58.890 33.333 15.53 7.43 38.79 2.52
3327 3400 8.743714 CATGATAGAAAACTTAAGCCCTTCTTT 58.256 33.333 15.53 10.28 36.25 2.52
3411 3491 2.299013 TGCGAATATACTGGCCCACTAG 59.701 50.000 0.00 0.00 0.00 2.57
3412 3492 2.931320 GCGAATATACTGGCCCACTAGC 60.931 54.545 0.00 0.00 0.00 3.42
3484 3564 6.382869 AAATATCTAAGTGGCATTGCACTC 57.617 37.500 11.39 1.48 0.00 3.51
3485 3565 2.857186 TCTAAGTGGCATTGCACTCA 57.143 45.000 11.39 0.00 0.00 3.41
3871 3951 3.747010 TGCATGCGCTGATTTGAATTTTT 59.253 34.783 14.09 0.00 39.64 1.94
4307 4401 5.236655 TCTCTCATACTACTGCACGAAAG 57.763 43.478 0.00 0.00 0.00 2.62
5137 5828 1.536766 TCGGACATTTGACGACGTACT 59.463 47.619 0.00 0.00 0.00 2.73
5144 5835 3.374220 TTTGACGACGTACTGTCCATT 57.626 42.857 0.00 0.00 45.23 3.16
5175 5866 4.699257 GGATCTGAACTTGAACTCATTGCT 59.301 41.667 0.00 0.00 0.00 3.91
5194 5885 8.950210 TCATTGCTTCTTTATCCTTTAGTGAAG 58.050 33.333 0.00 0.00 34.39 3.02
5224 5915 9.485206 CAAATACACATGATACATGAGATCAGA 57.515 33.333 16.86 4.72 36.77 3.27
5530 6225 1.493861 GGTTGGTACCTACTCCCTCC 58.506 60.000 23.04 4.76 41.53 4.30
5531 6226 1.109609 GTTGGTACCTACTCCCTCCG 58.890 60.000 17.94 0.00 0.00 4.63
5532 6227 0.706433 TTGGTACCTACTCCCTCCGT 59.294 55.000 14.36 0.00 0.00 4.69
5533 6228 0.257039 TGGTACCTACTCCCTCCGTC 59.743 60.000 14.36 0.00 0.00 4.79
5534 6229 0.467106 GGTACCTACTCCCTCCGTCC 60.467 65.000 4.06 0.00 0.00 4.79
5535 6230 0.467106 GTACCTACTCCCTCCGTCCC 60.467 65.000 0.00 0.00 0.00 4.46
5536 6231 0.920763 TACCTACTCCCTCCGTCCCA 60.921 60.000 0.00 0.00 0.00 4.37
5537 6232 1.233369 CCTACTCCCTCCGTCCCAT 59.767 63.158 0.00 0.00 0.00 4.00
5538 6233 0.481567 CCTACTCCCTCCGTCCCATA 59.518 60.000 0.00 0.00 0.00 2.74
5539 6234 1.133262 CCTACTCCCTCCGTCCCATAA 60.133 57.143 0.00 0.00 0.00 1.90
5540 6235 2.492940 CCTACTCCCTCCGTCCCATAAT 60.493 54.545 0.00 0.00 0.00 1.28
5541 6236 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
5542 6237 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
5543 6238 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
5544 6239 2.969950 CTCCCTCCGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
5545 6240 2.969950 TCCCTCCGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
5546 6241 2.969950 CCCTCCGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
5547 6242 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
5549 6244 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
5550 6245 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
5551 6246 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
5552 6247 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
5553 6248 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
5595 6290 4.823790 AAAACGTCTTACATTGTGGGAC 57.176 40.909 0.00 6.72 0.00 4.46
5597 6292 1.355971 CGTCTTACATTGTGGGACGG 58.644 55.000 24.96 14.26 43.69 4.79
5598 6293 1.067425 CGTCTTACATTGTGGGACGGA 60.067 52.381 24.96 5.37 43.69 4.69
5599 6294 2.618053 GTCTTACATTGTGGGACGGAG 58.382 52.381 0.00 0.00 0.00 4.63
5600 6295 1.553248 TCTTACATTGTGGGACGGAGG 59.447 52.381 0.00 0.00 0.00 4.30
5601 6296 0.616371 TTACATTGTGGGACGGAGGG 59.384 55.000 0.00 0.00 0.00 4.30
5602 6297 0.252330 TACATTGTGGGACGGAGGGA 60.252 55.000 0.00 0.00 0.00 4.20
5603 6298 1.221840 CATTGTGGGACGGAGGGAG 59.778 63.158 0.00 0.00 0.00 4.30
5604 6299 1.229529 ATTGTGGGACGGAGGGAGT 60.230 57.895 0.00 0.00 0.00 3.85
5605 6300 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
5632 6327 0.396060 TGCTGGAAAATGGTTTGGCC 59.604 50.000 0.00 0.00 37.90 5.36
5688 6383 6.940739 ACATACTTGTTATCTTCTCTGCTGT 58.059 36.000 0.00 0.00 29.55 4.40
5708 6403 7.469260 TGCTGTAACTGTCTTGTAAGTTTTTC 58.531 34.615 0.00 0.00 37.74 2.29
5770 6468 0.107945 CTTCTTGAGGAAGCCGGGAG 60.108 60.000 2.18 0.00 43.88 4.30
5949 6653 4.202151 ACGAGCATGTCTTCTGCATATACA 60.202 41.667 0.00 0.00 42.15 2.29
6026 6730 5.118990 ACTACACAATCCTGGATTTCGATG 58.881 41.667 19.12 15.96 28.87 3.84
6200 6904 9.543783 AATGAAGTATCGGAGGTAAAATTCTAC 57.456 33.333 0.00 0.00 0.00 2.59
6343 7047 6.364706 GTCCTCATAGACATCATCTTAAAGCG 59.635 42.308 0.00 0.00 39.04 4.68
6493 7197 5.659440 ACTGGTTTCAAATCAACAACTGT 57.341 34.783 0.00 0.00 0.00 3.55
6558 7262 0.251474 ACTACGTGGCCCACTAGTCA 60.251 55.000 12.94 0.00 29.41 3.41
6586 7290 5.891551 AGTGGTCTGTGTTAACCATTTCTTT 59.108 36.000 2.48 0.00 46.69 2.52
7004 7840 0.109132 GGACCGTTTCCGTACACGAT 60.109 55.000 2.76 0.00 43.02 3.73
7089 7925 6.652205 ATAAGAGGGTCATTTTCCTTGGTA 57.348 37.500 0.00 0.00 32.74 3.25
7206 8043 8.296000 CACTGACCATGTATTGTCATTTTTACA 58.704 33.333 3.43 0.00 40.46 2.41
7361 8198 5.842328 TGTTTCTAGAGGACCAAAGAAGGTA 59.158 40.000 0.00 0.00 43.38 3.08
7585 8422 5.292834 CAGCAACACATGTTATCTCTGGTAG 59.707 44.000 0.00 0.00 36.32 3.18
7608 8445 5.643777 AGTGTACACAGCTCAATTATGTTCC 59.356 40.000 27.06 0.00 0.00 3.62
7776 8613 9.965824 CTTTTCTTTGTATTTGTTGTATCACCT 57.034 29.630 0.00 0.00 0.00 4.00
7938 8775 2.035632 CCACTGAGATGTACTCCCTCC 58.964 57.143 0.00 0.00 44.34 4.30
8003 8849 9.939802 TTTCTTTACAGAGGGAGTAGTTAATTC 57.060 33.333 0.00 0.00 0.00 2.17
8087 8934 7.141363 GTCATTGTGCTCATGTCTAAACTTTT 58.859 34.615 0.00 0.00 0.00 2.27
8146 8993 5.711506 TGGATAAGAATGCACAAGTGATTGT 59.288 36.000 4.04 0.00 35.14 2.71
8421 9268 2.636647 TGCATCTCCTTGTGTTCACA 57.363 45.000 1.23 1.23 0.00 3.58
8495 9342 6.529125 GCATCGTCAATTTGAATTTGATGTCT 59.471 34.615 20.97 7.50 35.05 3.41
8522 9369 4.559300 GCATGAGCTTGGCTAACTTGAAAA 60.559 41.667 0.00 0.00 39.88 2.29
8564 9411 3.997681 CTGCACATGATGAGATCATCCTC 59.002 47.826 17.86 5.54 46.62 3.71
8691 9538 5.048083 GTCTCGAGAATCTCTGCATAGGATT 60.048 44.000 18.55 4.24 33.13 3.01
8745 9592 4.414337 AGGTGCCTTGATATGTTCTCTC 57.586 45.455 0.00 0.00 0.00 3.20
8842 9689 8.448615 GTCATTCTGTAAACTGTTGTATTACCC 58.551 37.037 0.00 0.00 0.00 3.69
8954 9802 3.326747 GCGAGGACAGTTGTACAGAATT 58.673 45.455 0.00 0.00 0.00 2.17
8980 9828 9.167311 TCTAGAAATAAAAAGGATTGAGTGAGC 57.833 33.333 0.00 0.00 0.00 4.26
8983 9831 8.084684 AGAAATAAAAAGGATTGAGTGAGCAAC 58.915 33.333 0.00 0.00 0.00 4.17
8987 9835 4.778534 AAGGATTGAGTGAGCAACATTG 57.221 40.909 0.00 0.00 0.00 2.82
8997 9846 4.646492 AGTGAGCAACATTGGAGTTTCTTT 59.354 37.500 0.00 0.00 0.00 2.52
9000 9849 5.108385 AGCAACATTGGAGTTTCTTTACG 57.892 39.130 0.00 0.00 0.00 3.18
9014 9863 7.813645 AGTTTCTTTACGTTAATTTAGCAGGG 58.186 34.615 0.00 0.00 0.00 4.45
9015 9864 6.746745 TTCTTTACGTTAATTTAGCAGGGG 57.253 37.500 0.00 0.00 0.00 4.79
9019 9868 2.290705 ACGTTAATTTAGCAGGGGCAGT 60.291 45.455 0.00 0.00 44.61 4.40
9023 9872 2.134789 ATTTAGCAGGGGCAGTCTTG 57.865 50.000 0.00 0.00 44.61 3.02
9034 9883 3.137533 GGGCAGTCTTGAGCAGATATTC 58.862 50.000 0.00 0.00 32.60 1.75
9056 9905 3.426695 CGGCAAAAGCAAGTTATCTGGAG 60.427 47.826 0.00 0.00 0.00 3.86
9069 9918 6.441222 AGTTATCTGGAGTCCCTTGTATGTA 58.559 40.000 6.74 0.00 0.00 2.29
9074 9923 5.045869 TCTGGAGTCCCTTGTATGTAAAAGG 60.046 44.000 6.74 2.49 42.29 3.11
9088 9937 5.004922 TGTAAAAGGTGAAGTTTGCAAGG 57.995 39.130 0.00 0.00 0.00 3.61
9094 9943 2.463876 GTGAAGTTTGCAAGGTGAAGC 58.536 47.619 0.00 0.00 0.00 3.86
9113 9962 6.845272 GAAGCATTCAAAAGTCGAATTCTC 57.155 37.500 0.00 0.00 46.62 2.87
9163 10014 4.047822 GAGATGACTACTTTGCATCCGAG 58.952 47.826 0.00 0.00 39.30 4.63
9189 10041 6.451064 TTGAAAAGGAAGAAGAGAAACCAC 57.549 37.500 0.00 0.00 0.00 4.16
9190 10042 4.887655 TGAAAAGGAAGAAGAGAAACCACC 59.112 41.667 0.00 0.00 0.00 4.61
9226 10078 2.163390 CGACAGAGGCGCATGTGAG 61.163 63.158 26.52 14.76 0.00 3.51
9227 10079 1.079543 GACAGAGGCGCATGTGAGT 60.080 57.895 26.52 3.79 0.00 3.41
9228 10080 0.173481 GACAGAGGCGCATGTGAGTA 59.827 55.000 26.52 0.00 0.00 2.59
9229 10081 0.108615 ACAGAGGCGCATGTGAGTAC 60.109 55.000 26.52 0.00 0.00 2.73
9230 10082 0.174389 CAGAGGCGCATGTGAGTACT 59.826 55.000 14.65 0.00 0.00 2.73
9231 10083 0.457851 AGAGGCGCATGTGAGTACTC 59.542 55.000 16.32 16.32 0.00 2.59
9232 10084 0.528684 GAGGCGCATGTGAGTACTCC 60.529 60.000 20.11 11.73 0.00 3.85
9233 10085 1.521681 GGCGCATGTGAGTACTCCC 60.522 63.158 20.11 9.54 0.00 4.30
9234 10086 1.517832 GCGCATGTGAGTACTCCCT 59.482 57.895 20.11 1.89 0.00 4.20
9235 10087 0.108138 GCGCATGTGAGTACTCCCTT 60.108 55.000 20.11 4.13 0.00 3.95
9236 10088 1.645034 CGCATGTGAGTACTCCCTTG 58.355 55.000 20.11 16.88 0.00 3.61
9237 10089 1.066858 CGCATGTGAGTACTCCCTTGT 60.067 52.381 20.11 0.00 0.00 3.16
9238 10090 2.165641 CGCATGTGAGTACTCCCTTGTA 59.834 50.000 20.11 0.00 0.00 2.41
9239 10091 3.368013 CGCATGTGAGTACTCCCTTGTAA 60.368 47.826 20.11 0.00 0.00 2.41
9240 10092 4.575885 GCATGTGAGTACTCCCTTGTAAA 58.424 43.478 20.11 0.00 0.00 2.01
9241 10093 4.631813 GCATGTGAGTACTCCCTTGTAAAG 59.368 45.833 20.11 2.28 45.69 1.85
9274 10126 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
9275 10127 8.954350 AGAGCGTTTAGATTACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
9276 10128 9.733219 GAGCGTTTAGATTACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
9277 10129 9.733219 AGCGTTTAGATTACTAAAGTAGTGATC 57.267 33.333 10.62 10.62 46.38 2.92
9285 10137 9.733219 GATTACTAAAGTAGTGATCTAAACGCT 57.267 33.333 11.11 0.00 44.10 5.07
9287 10139 9.918630 TTACTAAAGTAGTGATCTAAACGCTTT 57.081 29.630 0.00 3.97 39.81 3.51
9288 10140 8.828688 ACTAAAGTAGTGATCTAAACGCTTTT 57.171 30.769 10.23 0.00 37.69 2.27
9289 10141 9.918630 ACTAAAGTAGTGATCTAAACGCTTTTA 57.081 29.630 10.23 0.00 37.69 1.52
9307 10159 9.856162 ACGCTTTTATATTTATTTAGGAAGGGA 57.144 29.630 0.00 0.00 0.00 4.20
9336 10188 7.606456 ACTTCATTAATCTTAAAACTCGCTGGA 59.394 33.333 0.00 0.00 0.00 3.86
9337 10189 8.506168 TTCATTAATCTTAAAACTCGCTGGAT 57.494 30.769 0.00 0.00 0.00 3.41
9338 10190 8.142994 TCATTAATCTTAAAACTCGCTGGATC 57.857 34.615 0.00 0.00 0.00 3.36
9339 10191 6.583912 TTAATCTTAAAACTCGCTGGATCG 57.416 37.500 0.00 0.00 0.00 3.69
9340 10192 2.268298 TCTTAAAACTCGCTGGATCGC 58.732 47.619 0.00 0.00 0.00 4.58
9341 10193 1.327764 CTTAAAACTCGCTGGATCGCC 59.672 52.381 0.00 0.00 0.00 5.54
9342 10194 0.804544 TAAAACTCGCTGGATCGCCG 60.805 55.000 0.00 0.00 36.79 6.46
9350 10202 3.006672 CTGGATCGCCGGCTTAATT 57.993 52.632 26.68 3.80 36.79 1.40
9352 10204 1.676006 CTGGATCGCCGGCTTAATTTT 59.324 47.619 26.68 0.17 36.79 1.82
9371 10223 4.380843 TTTTTGGAGGTGCTCATAGGAA 57.619 40.909 0.00 0.00 31.08 3.36
9386 10238 2.423926 AGGAATAGAGTATGCGTGCG 57.576 50.000 0.00 0.00 0.00 5.34
9387 10239 1.681793 AGGAATAGAGTATGCGTGCGT 59.318 47.619 0.00 0.00 0.00 5.24
9388 10240 1.787155 GGAATAGAGTATGCGTGCGTG 59.213 52.381 0.00 0.00 0.00 5.34
9389 10241 2.460918 GAATAGAGTATGCGTGCGTGT 58.539 47.619 0.00 0.00 0.00 4.49
9390 10242 1.840181 ATAGAGTATGCGTGCGTGTG 58.160 50.000 0.00 0.00 0.00 3.82
9393 10245 0.093026 GAGTATGCGTGCGTGTGTTC 59.907 55.000 0.00 0.00 0.00 3.18
9394 10246 0.598942 AGTATGCGTGCGTGTGTTCA 60.599 50.000 0.00 0.00 0.00 3.18
9395 10247 0.442310 GTATGCGTGCGTGTGTTCAT 59.558 50.000 0.00 0.00 0.00 2.57
9396 10248 1.656594 GTATGCGTGCGTGTGTTCATA 59.343 47.619 0.00 0.00 0.00 2.15
9397 10249 0.442310 ATGCGTGCGTGTGTTCATAC 59.558 50.000 0.00 0.00 0.00 2.39
9398 10250 0.598942 TGCGTGCGTGTGTTCATACT 60.599 50.000 0.00 0.00 0.00 2.12
9399 10251 0.511221 GCGTGCGTGTGTTCATACTT 59.489 50.000 0.00 0.00 0.00 2.24
9401 10253 2.156117 GCGTGCGTGTGTTCATACTTTA 59.844 45.455 0.00 0.00 0.00 1.85
9402 10254 3.181524 GCGTGCGTGTGTTCATACTTTAT 60.182 43.478 0.00 0.00 0.00 1.40
9403 10255 4.668177 GCGTGCGTGTGTTCATACTTTATT 60.668 41.667 0.00 0.00 0.00 1.40
9404 10256 5.444877 GCGTGCGTGTGTTCATACTTTATTA 60.445 40.000 0.00 0.00 0.00 0.98
9405 10257 6.527089 CGTGCGTGTGTTCATACTTTATTAA 58.473 36.000 0.00 0.00 0.00 1.40
9407 10259 7.690637 CGTGCGTGTGTTCATACTTTATTAATT 59.309 33.333 0.00 0.00 0.00 1.40
9408 10260 9.337091 GTGCGTGTGTTCATACTTTATTAATTT 57.663 29.630 0.00 0.00 0.00 1.82
9409 10261 9.900710 TGCGTGTGTTCATACTTTATTAATTTT 57.099 25.926 0.00 0.00 0.00 1.82
9455 10307 6.757897 TTTTGGGTGTGCTTATGAAGATAG 57.242 37.500 0.00 0.00 0.00 2.08
9456 10308 5.692115 TTGGGTGTGCTTATGAAGATAGA 57.308 39.130 0.00 0.00 0.00 1.98
9457 10309 5.282055 TGGGTGTGCTTATGAAGATAGAG 57.718 43.478 0.00 0.00 0.00 2.43
9458 10310 4.716784 TGGGTGTGCTTATGAAGATAGAGT 59.283 41.667 0.00 0.00 0.00 3.24
9459 10311 5.897250 TGGGTGTGCTTATGAAGATAGAGTA 59.103 40.000 0.00 0.00 0.00 2.59
9460 10312 6.554982 TGGGTGTGCTTATGAAGATAGAGTAT 59.445 38.462 0.00 0.00 0.00 2.12
9461 10313 6.870965 GGGTGTGCTTATGAAGATAGAGTATG 59.129 42.308 0.00 0.00 0.00 2.39
9462 10314 6.367422 GGTGTGCTTATGAAGATAGAGTATGC 59.633 42.308 0.00 0.00 0.00 3.14
9463 10315 6.088749 GTGTGCTTATGAAGATAGAGTATGCG 59.911 42.308 0.00 0.00 0.00 4.73
9464 10316 6.153067 GTGCTTATGAAGATAGAGTATGCGT 58.847 40.000 0.00 0.00 0.00 5.24
9465 10317 7.040686 TGTGCTTATGAAGATAGAGTATGCGTA 60.041 37.037 0.00 0.00 0.00 4.42
9466 10318 7.971168 GTGCTTATGAAGATAGAGTATGCGTAT 59.029 37.037 0.00 0.00 0.00 3.06
9467 10319 7.970614 TGCTTATGAAGATAGAGTATGCGTATG 59.029 37.037 0.00 0.00 0.00 2.39
9468 10320 7.971168 GCTTATGAAGATAGAGTATGCGTATGT 59.029 37.037 0.00 0.00 0.00 2.29
9469 10321 9.283420 CTTATGAAGATAGAGTATGCGTATGTG 57.717 37.037 0.00 0.00 0.00 3.21
9483 10335 6.105657 TGCGTATGTGTGTTCATAAGAATG 57.894 37.500 0.00 0.00 35.92 2.67
9492 10344 5.006649 TGTGTTCATAAGAATGAGCGTATGC 59.993 40.000 0.00 0.00 44.00 3.14
9516 10368 8.841300 TGCATTTGTTTGTGTACTGTATTTCTA 58.159 29.630 0.00 0.00 0.00 2.10
9561 10414 2.143925 AGGCGTGCAAGAGTTAAACTC 58.856 47.619 2.99 0.00 45.38 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.126001 TGGTCTGAAGAACATGACACC 57.874 47.619 0.00 0.00 36.73 4.16
6 7 5.615544 CGAATTGGTCTGAAGAACATGACAC 60.616 44.000 0.00 0.00 42.02 3.67
8 9 4.690748 TCGAATTGGTCTGAAGAACATGAC 59.309 41.667 0.00 0.00 42.02 3.06
11 12 4.697352 CCTTCGAATTGGTCTGAAGAACAT 59.303 41.667 0.00 0.00 42.02 2.71
14 15 4.351874 ACCTTCGAATTGGTCTGAAGAA 57.648 40.909 0.00 0.00 38.27 2.52
15 16 4.351874 AACCTTCGAATTGGTCTGAAGA 57.648 40.909 9.33 0.00 38.27 2.87
16 17 6.554334 TTAAACCTTCGAATTGGTCTGAAG 57.446 37.500 9.33 0.00 36.99 3.02
17 18 6.712998 TCATTAAACCTTCGAATTGGTCTGAA 59.287 34.615 9.33 5.27 35.17 3.02
18 19 6.234920 TCATTAAACCTTCGAATTGGTCTGA 58.765 36.000 9.33 7.82 35.17 3.27
19 20 6.494893 TCATTAAACCTTCGAATTGGTCTG 57.505 37.500 9.33 6.02 35.17 3.51
20 21 6.884295 TCATCATTAAACCTTCGAATTGGTCT 59.116 34.615 9.33 0.00 35.17 3.85
21 22 6.967199 GTCATCATTAAACCTTCGAATTGGTC 59.033 38.462 9.33 0.00 35.17 4.02
22 23 6.403200 CGTCATCATTAAACCTTCGAATTGGT 60.403 38.462 0.00 0.00 38.35 3.67
23 24 5.965334 CGTCATCATTAAACCTTCGAATTGG 59.035 40.000 0.00 0.00 0.00 3.16
24 25 6.682863 GTCGTCATCATTAAACCTTCGAATTG 59.317 38.462 0.00 0.00 0.00 2.32
25 26 6.594159 AGTCGTCATCATTAAACCTTCGAATT 59.406 34.615 0.00 0.00 0.00 2.17
26 27 6.106673 AGTCGTCATCATTAAACCTTCGAAT 58.893 36.000 0.00 0.00 0.00 3.34
27 28 5.475719 AGTCGTCATCATTAAACCTTCGAA 58.524 37.500 0.00 0.00 0.00 3.71
28 29 5.068234 AGTCGTCATCATTAAACCTTCGA 57.932 39.130 0.00 0.00 0.00 3.71
29 30 5.347635 TGAAGTCGTCATCATTAAACCTTCG 59.652 40.000 0.00 0.00 0.00 3.79
30 31 6.721571 TGAAGTCGTCATCATTAAACCTTC 57.278 37.500 0.00 0.00 0.00 3.46
31 32 6.710744 AGTTGAAGTCGTCATCATTAAACCTT 59.289 34.615 0.64 0.00 35.70 3.50
32 33 6.231211 AGTTGAAGTCGTCATCATTAAACCT 58.769 36.000 0.64 0.00 35.70 3.50
33 34 6.481954 AGTTGAAGTCGTCATCATTAAACC 57.518 37.500 0.64 0.00 35.70 3.27
34 35 9.530129 CTAAAGTTGAAGTCGTCATCATTAAAC 57.470 33.333 0.64 0.00 35.70 2.01
35 36 8.717821 CCTAAAGTTGAAGTCGTCATCATTAAA 58.282 33.333 0.64 0.00 35.70 1.52
36 37 7.333423 CCCTAAAGTTGAAGTCGTCATCATTAA 59.667 37.037 0.64 0.00 35.70 1.40
37 38 6.816640 CCCTAAAGTTGAAGTCGTCATCATTA 59.183 38.462 0.64 0.00 35.70 1.90
38 39 5.643777 CCCTAAAGTTGAAGTCGTCATCATT 59.356 40.000 0.64 0.00 35.70 2.57
39 40 5.178797 CCCTAAAGTTGAAGTCGTCATCAT 58.821 41.667 0.64 0.00 35.70 2.45
40 41 4.566004 CCCTAAAGTTGAAGTCGTCATCA 58.434 43.478 0.64 0.00 35.70 3.07
41 42 3.371285 GCCCTAAAGTTGAAGTCGTCATC 59.629 47.826 0.00 0.00 35.70 2.92
42 43 3.335579 GCCCTAAAGTTGAAGTCGTCAT 58.664 45.455 0.00 0.00 35.70 3.06
43 44 2.762745 GCCCTAAAGTTGAAGTCGTCA 58.237 47.619 0.00 0.00 0.00 4.35
44 45 1.725164 CGCCCTAAAGTTGAAGTCGTC 59.275 52.381 0.00 0.00 0.00 4.20
45 46 1.792006 CGCCCTAAAGTTGAAGTCGT 58.208 50.000 0.00 0.00 0.00 4.34
46 47 0.442699 GCGCCCTAAAGTTGAAGTCG 59.557 55.000 0.00 0.00 0.00 4.18
47 48 0.803117 GGCGCCCTAAAGTTGAAGTC 59.197 55.000 18.11 0.00 0.00 3.01
48 49 0.109723 TGGCGCCCTAAAGTTGAAGT 59.890 50.000 26.77 0.00 0.00 3.01
49 50 1.243902 TTGGCGCCCTAAAGTTGAAG 58.756 50.000 26.77 0.00 0.00 3.02
50 51 1.816224 GATTGGCGCCCTAAAGTTGAA 59.184 47.619 26.77 8.43 0.00 2.69
51 52 1.459450 GATTGGCGCCCTAAAGTTGA 58.541 50.000 26.77 0.00 0.00 3.18
52 53 0.455815 GGATTGGCGCCCTAAAGTTG 59.544 55.000 26.77 0.00 0.00 3.16
53 54 0.331616 AGGATTGGCGCCCTAAAGTT 59.668 50.000 26.77 0.00 0.00 2.66
54 55 0.331616 AAGGATTGGCGCCCTAAAGT 59.668 50.000 26.77 0.35 31.36 2.66
55 56 1.947456 GTAAGGATTGGCGCCCTAAAG 59.053 52.381 26.77 0.00 31.36 1.85
56 57 1.282447 TGTAAGGATTGGCGCCCTAAA 59.718 47.619 26.77 12.75 31.36 1.85
57 58 0.913205 TGTAAGGATTGGCGCCCTAA 59.087 50.000 26.77 13.63 31.36 2.69
58 59 0.468226 CTGTAAGGATTGGCGCCCTA 59.532 55.000 26.77 13.06 31.36 3.53
59 60 1.224592 CTGTAAGGATTGGCGCCCT 59.775 57.895 26.77 11.88 0.00 5.19
60 61 1.077716 ACTGTAAGGATTGGCGCCC 60.078 57.895 26.77 8.57 39.30 6.13
61 62 0.392461 TGACTGTAAGGATTGGCGCC 60.392 55.000 22.73 22.73 39.30 6.53
62 63 0.727398 GTGACTGTAAGGATTGGCGC 59.273 55.000 0.00 0.00 39.30 6.53
63 64 2.093306 TGTGACTGTAAGGATTGGCG 57.907 50.000 0.00 0.00 39.30 5.69
64 65 3.127548 CACATGTGACTGTAAGGATTGGC 59.872 47.826 21.64 0.00 39.30 4.52
65 66 3.127548 GCACATGTGACTGTAAGGATTGG 59.872 47.826 29.80 0.00 39.30 3.16
66 67 3.752747 TGCACATGTGACTGTAAGGATTG 59.247 43.478 29.80 0.00 39.30 2.67
67 68 3.753272 GTGCACATGTGACTGTAAGGATT 59.247 43.478 29.80 0.00 39.30 3.01
68 69 3.244526 TGTGCACATGTGACTGTAAGGAT 60.245 43.478 29.80 0.00 39.30 3.24
69 70 2.103941 TGTGCACATGTGACTGTAAGGA 59.896 45.455 29.80 0.00 39.30 3.36
70 71 2.481568 CTGTGCACATGTGACTGTAAGG 59.518 50.000 29.80 0.00 39.30 2.69
71 72 3.392882 TCTGTGCACATGTGACTGTAAG 58.607 45.455 29.80 15.53 42.29 2.34
72 73 3.467374 TCTGTGCACATGTGACTGTAA 57.533 42.857 29.80 6.59 0.00 2.41
73 74 3.181466 ACTTCTGTGCACATGTGACTGTA 60.181 43.478 29.80 17.85 0.00 2.74
74 75 2.216046 CTTCTGTGCACATGTGACTGT 58.784 47.619 29.80 0.00 0.00 3.55
75 76 2.216046 ACTTCTGTGCACATGTGACTG 58.784 47.619 29.80 23.37 0.00 3.51
76 77 2.103771 AGACTTCTGTGCACATGTGACT 59.896 45.455 29.80 14.66 0.00 3.41
77 78 2.478134 GAGACTTCTGTGCACATGTGAC 59.522 50.000 29.80 22.03 0.00 3.67
78 79 2.759191 GAGACTTCTGTGCACATGTGA 58.241 47.619 29.80 11.81 0.00 3.58
79 80 1.458445 CGAGACTTCTGTGCACATGTG 59.542 52.381 22.00 21.83 0.00 3.21
80 81 1.341209 TCGAGACTTCTGTGCACATGT 59.659 47.619 22.00 18.71 0.00 3.21
81 82 1.723542 GTCGAGACTTCTGTGCACATG 59.276 52.381 22.00 15.61 0.00 3.21
82 83 1.341209 TGTCGAGACTTCTGTGCACAT 59.659 47.619 22.00 4.91 0.00 3.21
83 84 0.744281 TGTCGAGACTTCTGTGCACA 59.256 50.000 20.37 20.37 0.00 4.57
84 85 1.132588 GTGTCGAGACTTCTGTGCAC 58.867 55.000 10.75 10.75 0.00 4.57
85 86 0.317854 CGTGTCGAGACTTCTGTGCA 60.318 55.000 11.29 0.00 0.00 4.57
86 87 0.317938 ACGTGTCGAGACTTCTGTGC 60.318 55.000 11.29 0.00 0.00 4.57
87 88 1.002792 TGACGTGTCGAGACTTCTGTG 60.003 52.381 18.07 1.66 0.00 3.66
88 89 1.306148 TGACGTGTCGAGACTTCTGT 58.694 50.000 18.07 5.80 0.00 3.41
89 90 2.044860 GTTGACGTGTCGAGACTTCTG 58.955 52.381 18.07 2.68 0.00 3.02
90 91 1.333881 CGTTGACGTGTCGAGACTTCT 60.334 52.381 18.07 0.00 34.11 2.85
91 92 1.043224 CGTTGACGTGTCGAGACTTC 58.957 55.000 11.71 11.71 34.11 3.01
92 93 0.933509 GCGTTGACGTGTCGAGACTT 60.934 55.000 11.29 0.40 42.22 3.01
93 94 1.370172 GCGTTGACGTGTCGAGACT 60.370 57.895 11.29 0.00 42.22 3.24
94 95 0.933509 AAGCGTTGACGTGTCGAGAC 60.934 55.000 1.88 1.88 42.22 3.36
95 96 0.587768 TAAGCGTTGACGTGTCGAGA 59.412 50.000 0.00 0.00 42.22 4.04
96 97 1.614385 ATAAGCGTTGACGTGTCGAG 58.386 50.000 0.00 0.00 42.22 4.04
97 98 1.980844 GAATAAGCGTTGACGTGTCGA 59.019 47.619 0.00 0.00 42.22 4.20
98 99 1.983605 AGAATAAGCGTTGACGTGTCG 59.016 47.619 0.00 0.00 42.22 4.35
99 100 2.729882 ACAGAATAAGCGTTGACGTGTC 59.270 45.455 0.00 0.00 42.22 3.67
100 101 2.475111 CACAGAATAAGCGTTGACGTGT 59.525 45.455 0.00 0.00 42.22 4.49
101 102 2.159841 CCACAGAATAAGCGTTGACGTG 60.160 50.000 0.00 0.00 42.22 4.49
102 103 2.066262 CCACAGAATAAGCGTTGACGT 58.934 47.619 5.36 0.00 42.22 4.34
103 104 2.066262 ACCACAGAATAAGCGTTGACG 58.934 47.619 0.00 0.00 43.27 4.35
149 150 5.843673 TGAGGTACAAAGCACATCAAAAA 57.156 34.783 0.00 0.00 34.10 1.94
151 152 5.069318 TCATGAGGTACAAAGCACATCAAA 58.931 37.500 0.00 0.00 39.80 2.69
154 155 5.824904 AATCATGAGGTACAAAGCACATC 57.175 39.130 0.09 0.00 32.99 3.06
155 156 6.594788 AAAATCATGAGGTACAAAGCACAT 57.405 33.333 0.09 0.00 35.21 3.21
176 177 9.517868 TCCATCTAGGGTTTTATTTACGAAAAA 57.482 29.630 0.00 0.00 38.24 1.94
181 182 7.228706 AGCATTCCATCTAGGGTTTTATTTACG 59.771 37.037 0.00 0.00 38.24 3.18
182 183 8.465273 AGCATTCCATCTAGGGTTTTATTTAC 57.535 34.615 0.00 0.00 38.24 2.01
201 206 4.742438 TTAAAAGACACGGTGAGCATTC 57.258 40.909 16.29 1.08 0.00 2.67
206 211 8.084590 AGAAGTATTTTAAAAGACACGGTGAG 57.915 34.615 23.55 0.00 32.79 3.51
208 213 9.968743 GATAGAAGTATTTTAAAAGACACGGTG 57.031 33.333 23.55 6.58 32.79 4.94
257 262 0.676151 GAGAGGAAGCCTTGCACCTG 60.676 60.000 0.00 0.00 37.61 4.00
277 282 3.624205 GCCTAGGGTTAGGGGAAGAAAAC 60.624 52.174 11.72 0.00 45.66 2.43
341 347 1.075601 AGAGGGGAGGCAAATTCACA 58.924 50.000 0.00 0.00 0.00 3.58
501 513 1.390565 GAACTCGAGGAGGATCGGAA 58.609 55.000 18.41 0.00 42.93 4.30
537 549 1.140852 TCTATGTCGGGGCTTCATTGG 59.859 52.381 0.00 0.00 0.00 3.16
547 559 4.145807 AGATGTTAGGAGTCTATGTCGGG 58.854 47.826 0.00 0.00 0.00 5.14
612 626 9.902196 CATATATCTGAAGCATCTGATAGCTAG 57.098 37.037 19.05 9.03 44.59 3.42
614 628 7.147707 TGCATATATCTGAAGCATCTGATAGCT 60.148 37.037 19.05 9.63 44.59 3.32
667 681 0.616679 CTTAAGGACCAGGACCCCGA 60.617 60.000 4.04 0.00 0.00 5.14
669 683 1.923006 GCCTTAAGGACCAGGACCCC 61.923 65.000 26.21 0.00 37.39 4.95
685 699 0.250467 AAGTCTTCATGCACGTGCCT 60.250 50.000 35.72 25.10 41.18 4.75
793 812 4.805719 TGAGATTTCAAGATCATCGAACGG 59.194 41.667 0.00 0.00 0.00 4.44
914 940 3.579709 GAGTGACGTCTGTGACAATGAT 58.420 45.455 17.92 0.00 34.32 2.45
915 941 2.604614 CGAGTGACGTCTGTGACAATGA 60.605 50.000 17.92 0.00 34.32 2.57
916 942 1.716050 CGAGTGACGTCTGTGACAATG 59.284 52.381 17.92 0.00 34.32 2.82
918 944 1.018910 TCGAGTGACGTCTGTGACAA 58.981 50.000 17.92 0.00 43.13 3.18
919 945 1.018910 TTCGAGTGACGTCTGTGACA 58.981 50.000 17.92 0.00 43.13 3.58
920 946 1.396644 GTTCGAGTGACGTCTGTGAC 58.603 55.000 17.92 6.37 43.13 3.67
989 1022 2.179018 CTTTGTTGCGGCGATGGG 59.821 61.111 12.98 0.00 0.00 4.00
1264 1298 0.603707 TTTCCAGAAGCTGCAGACGG 60.604 55.000 20.43 9.37 0.00 4.79
1440 1494 4.084011 AGGCAATTAAGATCTCTCCAGC 57.916 45.455 0.00 0.00 0.00 4.85
1458 1512 4.158394 TGGAAAATGTAAGCATCTCAAGGC 59.842 41.667 0.00 0.00 33.50 4.35
1523 1577 2.158475 ACAGTTGGAGCCAATTGAGGAA 60.158 45.455 25.47 0.00 43.41 3.36
1576 1631 4.402155 AGACTCAGGCATTCTCTACTGAAG 59.598 45.833 0.00 0.00 39.26 3.02
1649 1705 5.758296 CAGTGCAGAAACTAAACTAGGACAA 59.242 40.000 0.00 0.00 0.00 3.18
1699 1755 3.059166 GGCCTATGCACAAAAACAAGTG 58.941 45.455 0.00 0.00 40.13 3.16
1703 1759 2.632028 ACATGGCCTATGCACAAAAACA 59.368 40.909 3.32 0.00 40.59 2.83
2058 2114 5.335191 CCCACTTCTTTCTTTCTCCAAATCG 60.335 44.000 0.00 0.00 0.00 3.34
2341 2397 8.861086 AGAGAGTAAGTTTGAAAGACATACAGA 58.139 33.333 0.00 0.00 33.91 3.41
2384 2440 4.793071 TGAATACAACAAACAATGCCGAG 58.207 39.130 0.00 0.00 0.00 4.63
2486 2549 7.573710 ACTGAATACCAATAAGATGGCAAGTA 58.426 34.615 0.00 0.00 44.75 2.24
2714 2777 8.458573 TTTTTCCAAAGTTGCTAACTCTGATA 57.541 30.769 4.54 0.00 41.91 2.15
2795 2858 7.523293 TTGACATTCAAGCAAAGGAATAAGA 57.477 32.000 0.00 0.00 32.71 2.10
2796 2859 9.859427 TTATTGACATTCAAGCAAAGGAATAAG 57.141 29.630 0.00 0.00 40.05 1.73
3092 3155 9.910267 AAACCAGAAGGAAAACTAACTAGTTTA 57.090 29.630 14.49 0.00 45.31 2.01
3093 3156 8.818622 AAACCAGAAGGAAAACTAACTAGTTT 57.181 30.769 14.49 8.71 46.58 2.66
3094 3157 8.683615 CAAAACCAGAAGGAAAACTAACTAGTT 58.316 33.333 13.68 13.68 42.48 2.24
3095 3158 8.050930 TCAAAACCAGAAGGAAAACTAACTAGT 58.949 33.333 0.00 0.00 38.69 2.57
3096 3159 8.446599 TCAAAACCAGAAGGAAAACTAACTAG 57.553 34.615 0.00 0.00 38.69 2.57
3131 3200 2.872245 ACTGTGAAACTGACACCATTCG 59.128 45.455 0.00 0.00 39.30 3.34
3135 3204 1.478916 TCGACTGTGAAACTGACACCA 59.521 47.619 0.00 0.00 39.30 4.17
3274 3343 3.930634 ATGAGCCTTCTGAAACTTTGC 57.069 42.857 0.00 0.00 0.00 3.68
3324 3397 8.481974 TGGAATTCATGCATCAATGTAAAAAG 57.518 30.769 7.93 0.00 0.00 2.27
3325 3398 8.843885 TTGGAATTCATGCATCAATGTAAAAA 57.156 26.923 7.93 0.00 0.00 1.94
3326 3399 8.843885 TTTGGAATTCATGCATCAATGTAAAA 57.156 26.923 7.93 0.00 0.00 1.52
3327 3400 9.451002 AATTTGGAATTCATGCATCAATGTAAA 57.549 25.926 7.93 0.00 0.00 2.01
3411 3491 4.695455 TGTCTAAAAAGCAGTATCAGTGGC 59.305 41.667 0.00 0.00 0.00 5.01
3412 3492 6.992063 ATGTCTAAAAAGCAGTATCAGTGG 57.008 37.500 0.00 0.00 0.00 4.00
3413 3493 8.935844 TGTTATGTCTAAAAAGCAGTATCAGTG 58.064 33.333 0.00 0.00 0.00 3.66
3414 3494 8.936864 GTGTTATGTCTAAAAAGCAGTATCAGT 58.063 33.333 0.00 0.00 0.00 3.41
3415 3495 8.391106 GGTGTTATGTCTAAAAAGCAGTATCAG 58.609 37.037 0.00 0.00 0.00 2.90
3416 3496 7.880713 TGGTGTTATGTCTAAAAAGCAGTATCA 59.119 33.333 0.00 0.00 0.00 2.15
3417 3497 8.263940 TGGTGTTATGTCTAAAAAGCAGTATC 57.736 34.615 0.00 0.00 0.00 2.24
3484 3564 8.725148 GGAAGGAATGTATATATTTCAGCTGTG 58.275 37.037 14.67 0.00 0.00 3.66
3485 3565 8.439971 TGGAAGGAATGTATATATTTCAGCTGT 58.560 33.333 14.67 0.00 0.00 4.40
3854 3934 4.784550 GCAATCAAAAATTCAAATCAGCGC 59.215 37.500 0.00 0.00 0.00 5.92
3855 3935 5.107026 TGGCAATCAAAAATTCAAATCAGCG 60.107 36.000 0.00 0.00 0.00 5.18
3871 3951 3.949586 TCCCTACAATCATGGCAATCA 57.050 42.857 0.00 0.00 0.00 2.57
5144 5835 7.009179 AGTTCAAGTTCAGATCCAGTTGATA 57.991 36.000 7.79 0.18 33.36 2.15
5523 6218 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
5524 6219 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
5525 6220 2.969950 TCTTACATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
5526 6221 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
5527 6222 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
5528 6223 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
5573 6268 4.260866 CGTCCCACAATGTAAGACGTTTTT 60.261 41.667 21.67 0.00 43.89 1.94
5574 6269 3.249080 CGTCCCACAATGTAAGACGTTTT 59.751 43.478 21.67 0.00 43.89 2.43
5575 6270 2.803956 CGTCCCACAATGTAAGACGTTT 59.196 45.455 21.67 0.00 43.89 3.60
5576 6271 2.409975 CGTCCCACAATGTAAGACGTT 58.590 47.619 21.67 0.00 43.89 3.99
5577 6272 1.337447 CCGTCCCACAATGTAAGACGT 60.337 52.381 25.28 0.00 46.62 4.34
5579 6274 2.618053 CTCCGTCCCACAATGTAAGAC 58.382 52.381 5.24 5.24 0.00 3.01
5580 6275 1.553248 CCTCCGTCCCACAATGTAAGA 59.447 52.381 0.00 0.00 0.00 2.10
5581 6276 1.406887 CCCTCCGTCCCACAATGTAAG 60.407 57.143 0.00 0.00 0.00 2.34
5582 6277 0.616371 CCCTCCGTCCCACAATGTAA 59.384 55.000 0.00 0.00 0.00 2.41
5583 6278 0.252330 TCCCTCCGTCCCACAATGTA 60.252 55.000 0.00 0.00 0.00 2.29
5584 6279 1.537889 TCCCTCCGTCCCACAATGT 60.538 57.895 0.00 0.00 0.00 2.71
5585 6280 1.221840 CTCCCTCCGTCCCACAATG 59.778 63.158 0.00 0.00 0.00 2.82
5586 6281 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
5587 6282 0.613853 CTACTCCCTCCGTCCCACAA 60.614 60.000 0.00 0.00 0.00 3.33
5588 6283 1.000019 CTACTCCCTCCGTCCCACA 60.000 63.158 0.00 0.00 0.00 4.17
5589 6284 0.614134 AACTACTCCCTCCGTCCCAC 60.614 60.000 0.00 0.00 0.00 4.61
5590 6285 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
5591 6286 2.149973 TAAACTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
5592 6287 4.321824 GCATATAAACTACTCCCTCCGTCC 60.322 50.000 0.00 0.00 0.00 4.79
5593 6288 4.523558 AGCATATAAACTACTCCCTCCGTC 59.476 45.833 0.00 0.00 0.00 4.79
5594 6289 4.281182 CAGCATATAAACTACTCCCTCCGT 59.719 45.833 0.00 0.00 0.00 4.69
5595 6290 4.322049 CCAGCATATAAACTACTCCCTCCG 60.322 50.000 0.00 0.00 0.00 4.63
5596 6291 4.838986 TCCAGCATATAAACTACTCCCTCC 59.161 45.833 0.00 0.00 0.00 4.30
5597 6292 6.420913 TTCCAGCATATAAACTACTCCCTC 57.579 41.667 0.00 0.00 0.00 4.30
5598 6293 6.824958 TTTCCAGCATATAAACTACTCCCT 57.175 37.500 0.00 0.00 0.00 4.20
5599 6294 7.040409 CCATTTTCCAGCATATAAACTACTCCC 60.040 40.741 0.00 0.00 0.00 4.30
5600 6295 7.502561 ACCATTTTCCAGCATATAAACTACTCC 59.497 37.037 0.00 0.00 0.00 3.85
5601 6296 8.451908 ACCATTTTCCAGCATATAAACTACTC 57.548 34.615 0.00 0.00 0.00 2.59
5602 6297 8.823220 AACCATTTTCCAGCATATAAACTACT 57.177 30.769 0.00 0.00 0.00 2.57
5603 6298 9.301153 CAAACCATTTTCCAGCATATAAACTAC 57.699 33.333 0.00 0.00 0.00 2.73
5604 6299 8.474025 CCAAACCATTTTCCAGCATATAAACTA 58.526 33.333 0.00 0.00 0.00 2.24
5605 6300 7.330262 CCAAACCATTTTCCAGCATATAAACT 58.670 34.615 0.00 0.00 0.00 2.66
5632 6327 5.711976 ACAAATACTGATTGTCCTCCAAAGG 59.288 40.000 0.00 0.00 44.89 3.11
5765 6463 1.134965 AGTTCAGCGATCTTTCTCCCG 60.135 52.381 0.00 0.00 0.00 5.14
5767 6465 4.749976 AGTTAGTTCAGCGATCTTTCTCC 58.250 43.478 0.00 0.00 0.00 3.71
5770 6468 6.467723 TTGAAGTTAGTTCAGCGATCTTTC 57.532 37.500 2.59 0.00 46.09 2.62
5888 6589 8.884124 TTCAAATTCAAAGGACAATAGGATCT 57.116 30.769 0.00 0.00 0.00 2.75
6200 6904 2.083774 TCGCCATAAGTGAAGCCAAAG 58.916 47.619 0.00 0.00 30.08 2.77
6493 7197 8.330466 ACAGTAAATTCATCAACCGAATGTAA 57.670 30.769 0.00 0.00 33.41 2.41
6530 7234 3.098377 TGGGCCACGTAGTAACATAGAA 58.902 45.455 0.00 0.00 41.61 2.10
6558 7262 2.092646 TGGTTAACACAGACCACTTGCT 60.093 45.455 8.10 0.00 40.85 3.91
6703 7412 8.755696 AATATTAAAATCACACGCATGTTTGT 57.244 26.923 0.00 0.00 36.72 2.83
7004 7840 4.789012 ATACCTCTTCGGTTTCACGTAA 57.211 40.909 0.00 0.00 46.37 3.18
7048 7884 8.217799 CCCTCTTATATCATTACCAAACCTTGA 58.782 37.037 0.00 0.00 0.00 3.02
7089 7925 6.530019 AACAGAACCACAACTTTCAAGAAT 57.470 33.333 0.00 0.00 0.00 2.40
7146 7983 8.991243 TTTTCATATTTCATGAAGCAAAGAGG 57.009 30.769 8.41 0.00 38.98 3.69
7206 8043 4.500389 ATCTCCTCAGTTCCTGGGATAT 57.500 45.455 0.00 0.00 32.95 1.63
7585 8422 5.643777 AGGAACATAATTGAGCTGTGTACAC 59.356 40.000 19.36 19.36 0.00 2.90
8003 8849 7.555195 AGGGTATAATTTAAGAAGTTGGAACCG 59.445 37.037 0.00 0.00 0.00 4.44
8087 8934 5.362430 GGATTAATCAATGGTGGCCAGTTTA 59.638 40.000 17.07 0.00 36.75 2.01
8146 8993 7.557358 ACTCAGGCATCATGTAATACAAAATGA 59.443 33.333 17.22 9.28 30.32 2.57
8421 9268 2.301296 AGCTGACATTCTGTACAGCAGT 59.699 45.455 18.45 14.99 45.32 4.40
8522 9369 2.892852 AGGTGTTATGCTGCACAAATGT 59.107 40.909 3.57 0.00 37.35 2.71
8564 9411 1.737735 TGTCTGATTGCCAGCGTCG 60.738 57.895 0.00 0.00 42.62 5.12
8657 9504 0.034337 TTCTCGAGACCAAAACCCCG 59.966 55.000 16.36 0.00 0.00 5.73
8658 9505 2.027100 AGATTCTCGAGACCAAAACCCC 60.027 50.000 16.36 0.00 0.00 4.95
8745 9592 7.254795 CCGCTTTACTGGAAATTTATCTACAGG 60.255 40.741 0.00 0.00 0.00 4.00
8842 9689 5.701750 TCATTTGTCATCAAAAGGGCAATTG 59.298 36.000 0.00 0.00 44.97 2.32
8954 9802 9.167311 GCTCACTCAATCCTTTTTATTTCTAGA 57.833 33.333 0.00 0.00 0.00 2.43
8976 9824 5.277779 CGTAAAGAAACTCCAATGTTGCTCA 60.278 40.000 0.00 0.00 34.91 4.26
8980 9828 9.458374 AATTAACGTAAAGAAACTCCAATGTTG 57.542 29.630 0.00 0.00 0.00 3.33
8987 9835 7.961283 CCTGCTAAATTAACGTAAAGAAACTCC 59.039 37.037 0.00 0.00 0.00 3.85
8997 9846 3.054948 ACTGCCCCTGCTAAATTAACGTA 60.055 43.478 0.00 0.00 38.71 3.57
9000 9849 3.621558 AGACTGCCCCTGCTAAATTAAC 58.378 45.455 0.00 0.00 38.71 2.01
9014 9863 2.799412 CGAATATCTGCTCAAGACTGCC 59.201 50.000 0.00 0.00 37.88 4.85
9015 9864 2.799412 CCGAATATCTGCTCAAGACTGC 59.201 50.000 0.00 0.00 37.88 4.40
9019 9868 3.541996 TTGCCGAATATCTGCTCAAGA 57.458 42.857 0.00 0.00 39.94 3.02
9023 9872 2.355756 TGCTTTTGCCGAATATCTGCTC 59.644 45.455 0.00 0.00 46.87 4.26
9034 9883 2.487762 TCCAGATAACTTGCTTTTGCCG 59.512 45.455 0.00 0.00 46.87 5.69
9056 9905 6.002082 ACTTCACCTTTTACATACAAGGGAC 58.998 40.000 8.37 0.00 43.59 4.46
9069 9918 3.513515 TCACCTTGCAAACTTCACCTTTT 59.486 39.130 0.00 0.00 0.00 2.27
9074 9923 2.159254 TGCTTCACCTTGCAAACTTCAC 60.159 45.455 0.00 0.00 36.15 3.18
9088 9937 6.145535 AGAATTCGACTTTTGAATGCTTCAC 58.854 36.000 0.00 0.00 38.33 3.18
9105 9954 7.889712 GAAAAATCTTTCAATTGCGAGAATTCG 59.110 33.333 12.58 0.00 43.46 3.34
9113 9962 6.768029 TTCAGGAAAAATCTTTCAATTGCG 57.232 33.333 0.00 0.00 42.44 4.85
9163 10014 7.649705 GTGGTTTCTCTTCTTCCTTTTCAATTC 59.350 37.037 0.00 0.00 0.00 2.17
9189 10041 4.796231 CAGGAACGTCGCCTCCGG 62.796 72.222 6.94 0.00 36.78 5.14
9190 10042 3.966026 GACAGGAACGTCGCCTCCG 62.966 68.421 6.94 1.01 36.78 4.63
9228 10080 7.711339 CGCTCTTATATTTCTTTACAAGGGAGT 59.289 37.037 0.00 0.00 0.00 3.85
9229 10081 7.711339 ACGCTCTTATATTTCTTTACAAGGGAG 59.289 37.037 0.00 0.00 0.00 4.30
9230 10082 7.562135 ACGCTCTTATATTTCTTTACAAGGGA 58.438 34.615 0.00 0.00 0.00 4.20
9231 10083 7.787725 ACGCTCTTATATTTCTTTACAAGGG 57.212 36.000 0.00 0.00 0.00 3.95
9248 10100 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
9249 10101 8.954350 TCACTACTTTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 40.05 4.09
9250 10102 9.733219 ATCACTACTTTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
9251 10103 9.733219 GATCACTACTTTAGTAATCTAAACGCT 57.267 33.333 0.00 0.00 40.05 5.07
9252 10104 9.733219 AGATCACTACTTTAGTAATCTAAACGC 57.267 33.333 0.00 0.00 40.05 4.84
9258 10110 9.733219 GCGTTTAGATCACTACTTTAGTAATCT 57.267 33.333 4.72 4.72 37.23 2.40
9259 10111 9.733219 AGCGTTTAGATCACTACTTTAGTAATC 57.267 33.333 0.00 0.00 37.23 1.75
9261 10113 9.918630 AAAGCGTTTAGATCACTACTTTAGTAA 57.081 29.630 0.00 0.00 37.23 2.24
9262 10114 9.918630 AAAAGCGTTTAGATCACTACTTTAGTA 57.081 29.630 0.00 0.00 37.23 1.82
9263 10115 8.828688 AAAAGCGTTTAGATCACTACTTTAGT 57.171 30.769 0.00 0.00 40.28 2.24
9281 10133 9.856162 TCCCTTCCTAAATAAATATAAAAGCGT 57.144 29.630 0.00 0.00 0.00 5.07
9296 10148 9.280456 AGATTAATGAAGTACTCCCTTCCTAAA 57.720 33.333 0.00 0.00 40.11 1.85
9297 10149 8.855804 AGATTAATGAAGTACTCCCTTCCTAA 57.144 34.615 0.00 0.00 40.11 2.69
9298 10150 8.855804 AAGATTAATGAAGTACTCCCTTCCTA 57.144 34.615 0.00 0.00 40.11 2.94
9299 10151 7.757242 AAGATTAATGAAGTACTCCCTTCCT 57.243 36.000 0.00 0.00 40.11 3.36
9300 10152 9.901172 TTTAAGATTAATGAAGTACTCCCTTCC 57.099 33.333 0.00 0.00 40.11 3.46
9306 10158 9.903185 GCGAGTTTTAAGATTAATGAAGTACTC 57.097 33.333 0.00 0.00 0.00 2.59
9307 10159 9.654663 AGCGAGTTTTAAGATTAATGAAGTACT 57.345 29.630 0.00 0.00 0.00 2.73
9308 10160 9.690434 CAGCGAGTTTTAAGATTAATGAAGTAC 57.310 33.333 0.00 0.00 0.00 2.73
9309 10161 8.879759 CCAGCGAGTTTTAAGATTAATGAAGTA 58.120 33.333 0.00 0.00 0.00 2.24
9314 10166 7.065894 CGATCCAGCGAGTTTTAAGATTAATG 58.934 38.462 0.00 0.00 0.00 1.90
9315 10167 6.292919 GCGATCCAGCGAGTTTTAAGATTAAT 60.293 38.462 0.00 0.00 0.00 1.40
9330 10182 4.585526 TAAGCCGGCGATCCAGCG 62.586 66.667 23.20 0.00 40.71 5.18
9350 10202 4.380843 TTCCTATGAGCACCTCCAAAAA 57.619 40.909 0.00 0.00 0.00 1.94
9352 10204 4.968719 TCTATTCCTATGAGCACCTCCAAA 59.031 41.667 0.00 0.00 0.00 3.28
9371 10223 1.134367 ACACACGCACGCATACTCTAT 59.866 47.619 0.00 0.00 0.00 1.98
9431 10283 6.945435 TCTATCTTCATAAGCACACCCAAAAA 59.055 34.615 0.00 0.00 0.00 1.94
9432 10284 6.480763 TCTATCTTCATAAGCACACCCAAAA 58.519 36.000 0.00 0.00 0.00 2.44
9433 10285 6.061022 TCTATCTTCATAAGCACACCCAAA 57.939 37.500 0.00 0.00 0.00 3.28
9434 10286 5.189736 ACTCTATCTTCATAAGCACACCCAA 59.810 40.000 0.00 0.00 0.00 4.12
9435 10287 4.716784 ACTCTATCTTCATAAGCACACCCA 59.283 41.667 0.00 0.00 0.00 4.51
9436 10288 5.283457 ACTCTATCTTCATAAGCACACCC 57.717 43.478 0.00 0.00 0.00 4.61
9437 10289 6.367422 GCATACTCTATCTTCATAAGCACACC 59.633 42.308 0.00 0.00 0.00 4.16
9438 10290 6.088749 CGCATACTCTATCTTCATAAGCACAC 59.911 42.308 0.00 0.00 0.00 3.82
9439 10291 6.152379 CGCATACTCTATCTTCATAAGCACA 58.848 40.000 0.00 0.00 0.00 4.57
9440 10292 6.153067 ACGCATACTCTATCTTCATAAGCAC 58.847 40.000 0.00 0.00 0.00 4.40
9441 10293 6.332735 ACGCATACTCTATCTTCATAAGCA 57.667 37.500 0.00 0.00 0.00 3.91
9442 10294 7.971168 ACATACGCATACTCTATCTTCATAAGC 59.029 37.037 0.00 0.00 0.00 3.09
9443 10295 9.283420 CACATACGCATACTCTATCTTCATAAG 57.717 37.037 0.00 0.00 0.00 1.73
9444 10296 8.793592 ACACATACGCATACTCTATCTTCATAA 58.206 33.333 0.00 0.00 0.00 1.90
9445 10297 8.237267 CACACATACGCATACTCTATCTTCATA 58.763 37.037 0.00 0.00 0.00 2.15
9446 10298 7.087007 CACACATACGCATACTCTATCTTCAT 58.913 38.462 0.00 0.00 0.00 2.57
9447 10299 6.039382 ACACACATACGCATACTCTATCTTCA 59.961 38.462 0.00 0.00 0.00 3.02
9448 10300 6.439599 ACACACATACGCATACTCTATCTTC 58.560 40.000 0.00 0.00 0.00 2.87
9449 10301 6.392625 ACACACATACGCATACTCTATCTT 57.607 37.500 0.00 0.00 0.00 2.40
9450 10302 6.039382 TGAACACACATACGCATACTCTATCT 59.961 38.462 0.00 0.00 0.00 1.98
9451 10303 6.206498 TGAACACACATACGCATACTCTATC 58.794 40.000 0.00 0.00 0.00 2.08
9452 10304 6.144078 TGAACACACATACGCATACTCTAT 57.856 37.500 0.00 0.00 0.00 1.98
9453 10305 5.570234 TGAACACACATACGCATACTCTA 57.430 39.130 0.00 0.00 0.00 2.43
9454 10306 4.450082 TGAACACACATACGCATACTCT 57.550 40.909 0.00 0.00 0.00 3.24
9455 10307 6.695713 TCTTATGAACACACATACGCATACTC 59.304 38.462 0.00 0.00 33.31 2.59
9456 10308 6.569780 TCTTATGAACACACATACGCATACT 58.430 36.000 0.00 0.00 33.31 2.12
9457 10309 6.822073 TCTTATGAACACACATACGCATAC 57.178 37.500 0.00 0.00 33.31 2.39
9458 10310 7.708752 TCATTCTTATGAACACACATACGCATA 59.291 33.333 0.00 0.00 37.83 3.14
9459 10311 6.538381 TCATTCTTATGAACACACATACGCAT 59.462 34.615 0.00 0.00 37.83 4.73
9460 10312 5.872070 TCATTCTTATGAACACACATACGCA 59.128 36.000 0.00 0.00 37.83 5.24
9461 10313 6.344572 TCATTCTTATGAACACACATACGC 57.655 37.500 0.00 0.00 37.83 4.42
9462 10314 6.414079 GCTCATTCTTATGAACACACATACG 58.586 40.000 0.00 0.00 40.17 3.06
9463 10315 6.036083 ACGCTCATTCTTATGAACACACATAC 59.964 38.462 0.00 0.00 40.17 2.39
9464 10316 6.106003 ACGCTCATTCTTATGAACACACATA 58.894 36.000 0.00 0.00 40.17 2.29
9465 10317 4.937620 ACGCTCATTCTTATGAACACACAT 59.062 37.500 0.00 0.00 40.17 3.21
9466 10318 4.314961 ACGCTCATTCTTATGAACACACA 58.685 39.130 0.00 0.00 40.17 3.72
9467 10319 4.928661 ACGCTCATTCTTATGAACACAC 57.071 40.909 0.00 0.00 40.17 3.82
9468 10320 5.006649 GCATACGCTCATTCTTATGAACACA 59.993 40.000 0.00 0.00 40.17 3.72
9469 10321 5.006649 TGCATACGCTCATTCTTATGAACAC 59.993 40.000 0.00 0.00 40.17 3.32
9483 10335 3.564511 ACACAAACAAATGCATACGCTC 58.435 40.909 0.00 0.00 39.64 5.03
9516 10368 0.611896 CCATGCCTCCCGGTTCTTTT 60.612 55.000 0.00 0.00 0.00 2.27
9520 10372 2.190578 CTCCATGCCTCCCGGTTC 59.809 66.667 0.00 0.00 0.00 3.62
9524 10376 1.445095 CTTCTCTCCATGCCTCCCG 59.555 63.158 0.00 0.00 0.00 5.14
9533 10386 1.004560 CTTGCACGCCTTCTCTCCA 60.005 57.895 0.00 0.00 0.00 3.86
9561 10414 3.420839 AAAAATGGATAAAGCTCGCCG 57.579 42.857 0.00 0.00 0.00 6.46
9583 10437 8.908903 TCAGATAAAGCTCACCAAGTTTTAAAA 58.091 29.630 0.00 0.00 41.93 1.52
9584 10438 8.458573 TCAGATAAAGCTCACCAAGTTTTAAA 57.541 30.769 0.00 0.00 41.93 1.52
9803 10658 0.107897 TCGCTGTTGGTGTCACTTGT 60.108 50.000 2.35 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.