Multiple sequence alignment - TraesCS4A01G264700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G264700 chr4A 100.000 4286 0 0 1 4286 577041628 577045913 0.000000e+00 7915.0
1 TraesCS4A01G264700 chr4A 95.941 271 9 2 2 270 572636752 572637022 5.090000e-119 438.0
2 TraesCS4A01G264700 chr4A 95.221 272 11 2 1 270 111773143 111772872 3.060000e-116 429.0
3 TraesCS4A01G264700 chr4A 94.872 273 12 2 1 271 607088008 607087736 3.960000e-115 425.0
4 TraesCS4A01G264700 chr4A 91.857 307 21 3 3672 3976 624632164 624631860 3.960000e-115 425.0
5 TraesCS4A01G264700 chr4A 94.853 272 13 1 1 271 65524430 65524701 1.420000e-114 424.0
6 TraesCS4A01G264700 chr4B 95.588 3332 130 8 965 4286 38797126 38793802 0.000000e+00 5323.0
7 TraesCS4A01G264700 chr4D 95.460 3238 132 7 1053 4286 26257605 26254379 0.000000e+00 5151.0
8 TraesCS4A01G264700 chr4D 84.894 331 25 11 431 760 26258486 26258180 1.160000e-80 311.0
9 TraesCS4A01G264700 chr6D 90.834 2542 202 18 1142 3673 13071317 13068797 0.000000e+00 3374.0
10 TraesCS4A01G264700 chr6A 90.979 2483 204 17 1202 3673 14355257 14352784 0.000000e+00 3326.0
11 TraesCS4A01G264700 chr6A 87.179 78 8 2 1496 1572 582492265 582492189 2.120000e-13 87.9
12 TraesCS4A01G264700 chr2B 90.983 2451 197 17 1229 3664 784618308 784620749 0.000000e+00 3280.0
13 TraesCS4A01G264700 chr6B 91.489 2350 181 12 1202 3544 23651270 23653607 0.000000e+00 3214.0
14 TraesCS4A01G264700 chr6B 91.315 1278 95 11 2274 3544 23673029 23674297 0.000000e+00 1731.0
15 TraesCS4A01G264700 chr2A 95.238 273 11 2 1 271 476998454 476998182 8.510000e-117 431.0
16 TraesCS4A01G264700 chr3D 94.872 273 12 2 1 271 490877223 490877495 3.960000e-115 425.0
17 TraesCS4A01G264700 chr3A 94.891 274 11 3 1 271 137209811 137210084 3.960000e-115 425.0
18 TraesCS4A01G264700 chr3A 94.853 272 12 2 1 271 269362421 269362151 1.420000e-114 424.0
19 TraesCS4A01G264700 chr2D 94.853 272 13 1 1 271 185291593 185291864 1.420000e-114 424.0
20 TraesCS4A01G264700 chr5B 90.909 308 24 3 3672 3976 687161189 687161495 1.110000e-110 411.0
21 TraesCS4A01G264700 chr5B 84.615 260 29 9 4033 4286 687161646 687161900 9.200000e-62 248.0
22 TraesCS4A01G264700 chr5D 86.971 307 23 8 3672 3976 544701406 544701115 3.200000e-86 329.0
23 TraesCS4A01G264700 chr5D 85.769 260 28 8 4033 4286 544700963 544700707 2.540000e-67 267.0
24 TraesCS4A01G264700 chr1D 76.555 209 43 4 1235 1438 441617848 441617641 4.530000e-20 110.0
25 TraesCS4A01G264700 chr3B 87.179 78 8 2 1496 1572 76730532 76730608 2.120000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G264700 chr4A 577041628 577045913 4285 False 7915.0 7915 100.000 1 4286 1 chr4A.!!$F3 4285
1 TraesCS4A01G264700 chr4B 38793802 38797126 3324 True 5323.0 5323 95.588 965 4286 1 chr4B.!!$R1 3321
2 TraesCS4A01G264700 chr4D 26254379 26258486 4107 True 2731.0 5151 90.177 431 4286 2 chr4D.!!$R1 3855
3 TraesCS4A01G264700 chr6D 13068797 13071317 2520 True 3374.0 3374 90.834 1142 3673 1 chr6D.!!$R1 2531
4 TraesCS4A01G264700 chr6A 14352784 14355257 2473 True 3326.0 3326 90.979 1202 3673 1 chr6A.!!$R1 2471
5 TraesCS4A01G264700 chr2B 784618308 784620749 2441 False 3280.0 3280 90.983 1229 3664 1 chr2B.!!$F1 2435
6 TraesCS4A01G264700 chr6B 23651270 23653607 2337 False 3214.0 3214 91.489 1202 3544 1 chr6B.!!$F1 2342
7 TraesCS4A01G264700 chr6B 23673029 23674297 1268 False 1731.0 1731 91.315 2274 3544 1 chr6B.!!$F2 1270
8 TraesCS4A01G264700 chr5B 687161189 687161900 711 False 329.5 411 87.762 3672 4286 2 chr5B.!!$F1 614
9 TraesCS4A01G264700 chr5D 544700707 544701406 699 True 298.0 329 86.370 3672 4286 2 chr5D.!!$R1 614

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
876 923 0.037590 ATTTGTCGGCCCAGCTAACA 59.962 50.0 0.00 0.0 0.0 2.41 F
951 998 0.181587 TGACTTTGCCGTTTCCCTCA 59.818 50.0 0.00 0.0 0.0 3.86 F
1550 1860 0.473886 CCGTCCTTATCCATCCCCCT 60.474 60.0 0.00 0.0 0.0 4.79 F
2235 2545 0.592637 CGACATTGTGCAAAGCTGGA 59.407 50.0 0.00 0.0 0.0 3.86 F
3033 3343 0.608035 TTGCATTGGACCGGGACTTC 60.608 55.0 6.32 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 2075 0.466543 AGCGTGTTGTAGGTGGACAA 59.533 50.000 0.00 0.00 36.98 3.18 R
1809 2119 1.079127 CACGGCGGACTCCATCTTT 60.079 57.895 13.24 0.00 0.00 2.52 R
3018 3328 0.249398 CTTCGAAGTCCCGGTCCAAT 59.751 55.000 17.24 0.00 0.00 3.16 R
3243 3553 0.776810 TGCCCCTCTTGGATGTTGAA 59.223 50.000 0.00 0.00 35.39 2.69 R
4000 4369 2.364970 ACTTTGCCTTTTATGCACTGCA 59.635 40.909 6.09 6.09 44.86 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.467804 GACTCTTCTGGCCCATCTCC 59.532 60.000 0.00 0.00 0.00 3.71
20 21 1.333636 ACTCTTCTGGCCCATCTCCG 61.334 60.000 0.00 0.00 0.00 4.63
21 22 2.037620 CTCTTCTGGCCCATCTCCGG 62.038 65.000 0.00 0.00 0.00 5.14
22 23 2.285368 TTCTGGCCCATCTCCGGT 60.285 61.111 0.00 0.00 0.00 5.28
23 24 1.002403 TTCTGGCCCATCTCCGGTA 59.998 57.895 0.00 0.00 0.00 4.02
24 25 1.335132 TTCTGGCCCATCTCCGGTAC 61.335 60.000 0.00 0.00 0.00 3.34
25 26 1.762460 CTGGCCCATCTCCGGTACT 60.762 63.158 0.00 0.00 0.00 2.73
26 27 1.749334 CTGGCCCATCTCCGGTACTC 61.749 65.000 0.00 0.00 0.00 2.59
27 28 2.508751 GGCCCATCTCCGGTACTCC 61.509 68.421 0.00 0.00 0.00 3.85
37 38 3.709567 GGTACTCCGTGGGCTTCT 58.290 61.111 0.00 0.00 0.00 2.85
38 39 1.980844 GGTACTCCGTGGGCTTCTT 59.019 57.895 0.00 0.00 0.00 2.52
39 40 0.108281 GGTACTCCGTGGGCTTCTTC 60.108 60.000 0.00 0.00 0.00 2.87
40 41 0.896226 GTACTCCGTGGGCTTCTTCT 59.104 55.000 0.00 0.00 0.00 2.85
41 42 0.895530 TACTCCGTGGGCTTCTTCTG 59.104 55.000 0.00 0.00 0.00 3.02
42 43 1.078848 CTCCGTGGGCTTCTTCTGG 60.079 63.158 0.00 0.00 0.00 3.86
43 44 1.831652 CTCCGTGGGCTTCTTCTGGT 61.832 60.000 0.00 0.00 0.00 4.00
44 45 1.376037 CCGTGGGCTTCTTCTGGTC 60.376 63.158 0.00 0.00 0.00 4.02
45 46 1.674057 CGTGGGCTTCTTCTGGTCT 59.326 57.895 0.00 0.00 0.00 3.85
46 47 0.895530 CGTGGGCTTCTTCTGGTCTA 59.104 55.000 0.00 0.00 0.00 2.59
47 48 1.275291 CGTGGGCTTCTTCTGGTCTAA 59.725 52.381 0.00 0.00 0.00 2.10
48 49 2.289444 CGTGGGCTTCTTCTGGTCTAAA 60.289 50.000 0.00 0.00 0.00 1.85
49 50 3.751518 GTGGGCTTCTTCTGGTCTAAAA 58.248 45.455 0.00 0.00 0.00 1.52
50 51 4.142038 GTGGGCTTCTTCTGGTCTAAAAA 58.858 43.478 0.00 0.00 0.00 1.94
51 52 4.767409 GTGGGCTTCTTCTGGTCTAAAAAT 59.233 41.667 0.00 0.00 0.00 1.82
52 53 4.766891 TGGGCTTCTTCTGGTCTAAAAATG 59.233 41.667 0.00 0.00 0.00 2.32
53 54 5.010282 GGGCTTCTTCTGGTCTAAAAATGA 58.990 41.667 0.00 0.00 0.00 2.57
54 55 5.654209 GGGCTTCTTCTGGTCTAAAAATGAT 59.346 40.000 0.00 0.00 0.00 2.45
55 56 6.183360 GGGCTTCTTCTGGTCTAAAAATGATC 60.183 42.308 0.00 0.00 0.00 2.92
56 57 6.601217 GGCTTCTTCTGGTCTAAAAATGATCT 59.399 38.462 0.00 0.00 0.00 2.75
57 58 7.201688 GGCTTCTTCTGGTCTAAAAATGATCTC 60.202 40.741 0.00 0.00 0.00 2.75
58 59 7.201688 GCTTCTTCTGGTCTAAAAATGATCTCC 60.202 40.741 0.00 0.00 0.00 3.71
59 60 6.341316 TCTTCTGGTCTAAAAATGATCTCCG 58.659 40.000 0.00 0.00 0.00 4.63
60 61 5.677319 TCTGGTCTAAAAATGATCTCCGT 57.323 39.130 0.00 0.00 0.00 4.69
61 62 5.419542 TCTGGTCTAAAAATGATCTCCGTG 58.580 41.667 0.00 0.00 0.00 4.94
62 63 5.186992 TCTGGTCTAAAAATGATCTCCGTGA 59.813 40.000 0.00 0.00 0.00 4.35
63 64 5.800296 TGGTCTAAAAATGATCTCCGTGAA 58.200 37.500 0.00 0.00 0.00 3.18
64 65 6.234920 TGGTCTAAAAATGATCTCCGTGAAA 58.765 36.000 0.00 0.00 0.00 2.69
65 66 6.884295 TGGTCTAAAAATGATCTCCGTGAAAT 59.116 34.615 0.00 0.00 0.00 2.17
66 67 7.393234 TGGTCTAAAAATGATCTCCGTGAAATT 59.607 33.333 0.00 0.00 0.00 1.82
67 68 8.244113 GGTCTAAAAATGATCTCCGTGAAATTT 58.756 33.333 0.00 0.00 30.88 1.82
68 69 9.278734 GTCTAAAAATGATCTCCGTGAAATTTC 57.721 33.333 11.41 11.41 29.97 2.17
69 70 9.008965 TCTAAAAATGATCTCCGTGAAATTTCA 57.991 29.630 16.91 16.91 34.20 2.69
70 71 9.282247 CTAAAAATGATCTCCGTGAAATTTCAG 57.718 33.333 21.05 14.19 37.98 3.02
71 72 5.824904 AATGATCTCCGTGAAATTTCAGG 57.175 39.130 26.55 26.55 41.39 3.86
72 73 4.286297 TGATCTCCGTGAAATTTCAGGT 57.714 40.909 29.27 16.99 40.44 4.00
73 74 4.253685 TGATCTCCGTGAAATTTCAGGTC 58.746 43.478 29.27 22.55 40.44 3.85
74 75 3.762407 TCTCCGTGAAATTTCAGGTCA 57.238 42.857 29.27 18.90 40.44 4.02
75 76 4.079980 TCTCCGTGAAATTTCAGGTCAA 57.920 40.909 29.27 17.99 40.44 3.18
76 77 4.651778 TCTCCGTGAAATTTCAGGTCAAT 58.348 39.130 29.27 0.00 40.44 2.57
77 78 5.070001 TCTCCGTGAAATTTCAGGTCAATT 58.930 37.500 29.27 0.00 40.44 2.32
78 79 5.048782 TCTCCGTGAAATTTCAGGTCAATTG 60.049 40.000 29.27 17.90 40.44 2.32
79 80 4.022416 TCCGTGAAATTTCAGGTCAATTGG 60.022 41.667 29.27 17.36 40.44 3.16
80 81 4.022416 CCGTGAAATTTCAGGTCAATTGGA 60.022 41.667 29.27 2.01 40.44 3.53
81 82 4.917415 CGTGAAATTTCAGGTCAATTGGAC 59.083 41.667 25.63 9.10 37.98 4.02
82 83 5.278463 CGTGAAATTTCAGGTCAATTGGACT 60.278 40.000 25.63 1.20 39.59 3.85
83 84 6.152379 GTGAAATTTCAGGTCAATTGGACTC 58.848 40.000 21.05 0.87 39.59 3.36
84 85 5.243730 TGAAATTTCAGGTCAATTGGACTCC 59.756 40.000 16.91 3.98 38.25 3.85
85 86 2.472695 TTCAGGTCAATTGGACTCCG 57.527 50.000 5.42 1.85 46.16 4.63
86 87 1.348064 TCAGGTCAATTGGACTCCGT 58.652 50.000 5.42 0.00 46.16 4.69
87 88 1.697432 TCAGGTCAATTGGACTCCGTT 59.303 47.619 5.42 0.00 46.16 4.44
88 89 2.105821 TCAGGTCAATTGGACTCCGTTT 59.894 45.455 5.42 0.00 46.16 3.60
89 90 2.226437 CAGGTCAATTGGACTCCGTTTG 59.774 50.000 5.42 4.20 46.16 2.93
90 91 1.539827 GGTCAATTGGACTCCGTTTGG 59.460 52.381 5.42 0.00 46.16 3.28
91 92 2.227194 GTCAATTGGACTCCGTTTGGT 58.773 47.619 5.42 0.00 43.46 3.67
92 93 2.621526 GTCAATTGGACTCCGTTTGGTT 59.378 45.455 5.42 0.00 43.46 3.67
93 94 3.067601 GTCAATTGGACTCCGTTTGGTTT 59.932 43.478 5.42 0.00 43.46 3.27
94 95 3.702045 TCAATTGGACTCCGTTTGGTTTT 59.298 39.130 5.42 0.00 36.30 2.43
95 96 4.048504 CAATTGGACTCCGTTTGGTTTTC 58.951 43.478 0.00 0.00 36.30 2.29
96 97 1.682740 TGGACTCCGTTTGGTTTTCC 58.317 50.000 0.00 0.00 41.14 3.13
97 98 1.213430 TGGACTCCGTTTGGTTTTCCT 59.787 47.619 0.00 0.00 41.38 3.36
98 99 2.304092 GGACTCCGTTTGGTTTTCCTT 58.696 47.619 0.00 0.00 41.38 3.36
99 100 2.691526 GGACTCCGTTTGGTTTTCCTTT 59.308 45.455 0.00 0.00 41.38 3.11
100 101 3.131577 GGACTCCGTTTGGTTTTCCTTTT 59.868 43.478 0.00 0.00 41.38 2.27
101 102 4.357142 GACTCCGTTTGGTTTTCCTTTTC 58.643 43.478 0.00 0.00 41.38 2.29
102 103 4.021229 ACTCCGTTTGGTTTTCCTTTTCT 58.979 39.130 0.00 0.00 41.38 2.52
103 104 4.142249 ACTCCGTTTGGTTTTCCTTTTCTG 60.142 41.667 0.00 0.00 41.38 3.02
104 105 2.863740 CCGTTTGGTTTTCCTTTTCTGC 59.136 45.455 0.00 0.00 41.38 4.26
105 106 2.533942 CGTTTGGTTTTCCTTTTCTGCG 59.466 45.455 0.00 0.00 41.38 5.18
106 107 3.732471 CGTTTGGTTTTCCTTTTCTGCGA 60.732 43.478 0.00 0.00 41.38 5.10
107 108 4.368315 GTTTGGTTTTCCTTTTCTGCGAT 58.632 39.130 0.00 0.00 41.38 4.58
108 109 5.525199 GTTTGGTTTTCCTTTTCTGCGATA 58.475 37.500 0.00 0.00 41.38 2.92
109 110 4.759516 TGGTTTTCCTTTTCTGCGATAC 57.240 40.909 0.00 0.00 41.38 2.24
110 111 4.394729 TGGTTTTCCTTTTCTGCGATACT 58.605 39.130 0.00 0.00 41.38 2.12
111 112 4.454504 TGGTTTTCCTTTTCTGCGATACTC 59.545 41.667 0.00 0.00 41.38 2.59
112 113 4.454504 GGTTTTCCTTTTCTGCGATACTCA 59.545 41.667 0.00 0.00 36.94 3.41
113 114 5.048991 GGTTTTCCTTTTCTGCGATACTCAA 60.049 40.000 0.00 0.00 36.94 3.02
114 115 6.435428 GTTTTCCTTTTCTGCGATACTCAAA 58.565 36.000 0.00 0.00 0.00 2.69
115 116 6.627395 TTTCCTTTTCTGCGATACTCAAAA 57.373 33.333 0.00 0.00 0.00 2.44
116 117 6.627395 TTCCTTTTCTGCGATACTCAAAAA 57.373 33.333 0.00 0.00 0.00 1.94
117 118 6.817765 TCCTTTTCTGCGATACTCAAAAAT 57.182 33.333 0.00 0.00 0.00 1.82
118 119 7.915293 TCCTTTTCTGCGATACTCAAAAATA 57.085 32.000 0.00 0.00 0.00 1.40
119 120 8.330466 TCCTTTTCTGCGATACTCAAAAATAA 57.670 30.769 0.00 0.00 0.00 1.40
120 121 8.450964 TCCTTTTCTGCGATACTCAAAAATAAG 58.549 33.333 0.00 0.00 0.00 1.73
121 122 8.450964 CCTTTTCTGCGATACTCAAAAATAAGA 58.549 33.333 0.00 0.00 0.00 2.10
122 123 9.825972 CTTTTCTGCGATACTCAAAAATAAGAA 57.174 29.630 0.00 0.00 0.00 2.52
145 146 3.942130 AAACAGAAACTGGCATTAGGC 57.058 42.857 0.00 0.00 43.74 3.93
146 147 2.887151 ACAGAAACTGGCATTAGGCT 57.113 45.000 0.00 0.00 44.01 4.58
147 148 2.716217 ACAGAAACTGGCATTAGGCTC 58.284 47.619 0.00 0.00 44.01 4.70
148 149 2.307098 ACAGAAACTGGCATTAGGCTCT 59.693 45.455 0.00 0.00 44.01 4.09
149 150 3.519510 ACAGAAACTGGCATTAGGCTCTA 59.480 43.478 0.00 0.00 44.01 2.43
150 151 4.019321 ACAGAAACTGGCATTAGGCTCTAA 60.019 41.667 0.00 0.00 44.01 2.10
151 152 4.574013 CAGAAACTGGCATTAGGCTCTAAG 59.426 45.833 0.00 0.00 44.01 2.18
152 153 4.226168 AGAAACTGGCATTAGGCTCTAAGT 59.774 41.667 0.00 0.00 44.01 2.24
153 154 4.576330 AACTGGCATTAGGCTCTAAGTT 57.424 40.909 0.00 0.00 44.01 2.66
154 155 5.693769 AACTGGCATTAGGCTCTAAGTTA 57.306 39.130 0.00 0.00 44.01 2.24
155 156 5.693769 ACTGGCATTAGGCTCTAAGTTAA 57.306 39.130 0.00 0.00 44.01 2.01
156 157 6.253946 ACTGGCATTAGGCTCTAAGTTAAT 57.746 37.500 0.00 0.00 44.01 1.40
157 158 7.374975 ACTGGCATTAGGCTCTAAGTTAATA 57.625 36.000 0.00 0.00 44.01 0.98
158 159 7.445945 ACTGGCATTAGGCTCTAAGTTAATAG 58.554 38.462 0.00 0.00 44.01 1.73
159 160 6.769512 TGGCATTAGGCTCTAAGTTAATAGG 58.230 40.000 0.00 0.00 44.01 2.57
160 161 6.329197 TGGCATTAGGCTCTAAGTTAATAGGT 59.671 38.462 0.00 0.00 44.01 3.08
161 162 7.147373 TGGCATTAGGCTCTAAGTTAATAGGTT 60.147 37.037 0.00 0.00 44.01 3.50
162 163 8.373220 GGCATTAGGCTCTAAGTTAATAGGTTA 58.627 37.037 0.00 0.00 44.01 2.85
163 164 9.425577 GCATTAGGCTCTAAGTTAATAGGTTAG 57.574 37.037 0.00 0.00 40.25 2.34
166 167 9.933240 TTAGGCTCTAAGTTAATAGGTTAGTCT 57.067 33.333 0.00 0.00 0.00 3.24
167 168 8.467963 AGGCTCTAAGTTAATAGGTTAGTCTC 57.532 38.462 0.00 0.00 0.00 3.36
168 169 8.060075 AGGCTCTAAGTTAATAGGTTAGTCTCA 58.940 37.037 0.00 0.00 0.00 3.27
169 170 8.693625 GGCTCTAAGTTAATAGGTTAGTCTCAA 58.306 37.037 0.00 0.00 0.00 3.02
215 216 9.985730 ATAAATGCATATAACCATCCAAGTTTG 57.014 29.630 0.00 0.00 0.00 2.93
216 217 7.658525 AATGCATATAACCATCCAAGTTTGA 57.341 32.000 0.00 0.00 0.00 2.69
217 218 7.844493 ATGCATATAACCATCCAAGTTTGAT 57.156 32.000 0.00 0.00 0.00 2.57
218 219 8.938801 ATGCATATAACCATCCAAGTTTGATA 57.061 30.769 0.00 0.00 0.00 2.15
219 220 8.759481 TGCATATAACCATCCAAGTTTGATAA 57.241 30.769 0.00 0.00 0.00 1.75
220 221 9.365906 TGCATATAACCATCCAAGTTTGATAAT 57.634 29.630 0.00 0.00 0.00 1.28
283 284 1.526887 CGTATCAACGGTGATGATGGC 59.473 52.381 26.11 9.46 44.49 4.40
284 285 2.560504 GTATCAACGGTGATGATGGCA 58.439 47.619 26.11 1.17 44.49 4.92
285 286 2.127271 ATCAACGGTGATGATGGCAA 57.873 45.000 16.83 0.00 43.13 4.52
286 287 2.127271 TCAACGGTGATGATGGCAAT 57.873 45.000 0.00 0.00 0.00 3.56
287 288 3.274095 TCAACGGTGATGATGGCAATA 57.726 42.857 0.00 0.00 0.00 1.90
288 289 3.615155 TCAACGGTGATGATGGCAATAA 58.385 40.909 0.00 0.00 0.00 1.40
289 290 4.206375 TCAACGGTGATGATGGCAATAAT 58.794 39.130 0.00 0.00 0.00 1.28
290 291 4.036616 TCAACGGTGATGATGGCAATAATG 59.963 41.667 0.00 0.00 0.00 1.90
291 292 2.886523 ACGGTGATGATGGCAATAATGG 59.113 45.455 0.00 0.00 0.00 3.16
313 314 1.065551 GGGAACGTCAATAGCAATGGC 59.934 52.381 0.00 0.00 41.61 4.40
338 339 1.721487 GGCAATCCCGATGACAACG 59.279 57.895 0.00 0.00 0.00 4.10
339 340 1.062525 GCAATCCCGATGACAACGC 59.937 57.895 0.00 0.00 0.00 4.84
340 341 1.643868 GCAATCCCGATGACAACGCA 61.644 55.000 0.00 0.00 0.00 5.24
341 342 0.374758 CAATCCCGATGACAACGCAG 59.625 55.000 0.00 0.00 0.00 5.18
342 343 0.744414 AATCCCGATGACAACGCAGG 60.744 55.000 0.00 0.00 0.00 4.85
343 344 3.499737 CCCGATGACAACGCAGGC 61.500 66.667 0.00 0.00 0.00 4.85
344 345 2.741985 CCGATGACAACGCAGGCA 60.742 61.111 0.00 0.00 0.00 4.75
345 346 2.324330 CCGATGACAACGCAGGCAA 61.324 57.895 0.00 0.00 0.00 4.52
346 347 1.154413 CGATGACAACGCAGGCAAC 60.154 57.895 0.00 0.00 0.00 4.17
347 348 1.210155 GATGACAACGCAGGCAACC 59.790 57.895 0.00 0.00 37.17 3.77
348 349 1.228245 ATGACAACGCAGGCAACCT 60.228 52.632 0.00 0.00 37.17 3.50
349 350 1.237285 ATGACAACGCAGGCAACCTC 61.237 55.000 0.00 0.00 37.17 3.85
350 351 1.598130 GACAACGCAGGCAACCTCT 60.598 57.895 0.00 0.00 37.17 3.69
351 352 0.320421 GACAACGCAGGCAACCTCTA 60.320 55.000 0.00 0.00 37.17 2.43
352 353 0.107831 ACAACGCAGGCAACCTCTAA 59.892 50.000 0.00 0.00 37.17 2.10
353 354 0.798776 CAACGCAGGCAACCTCTAAG 59.201 55.000 0.00 0.00 37.17 2.18
354 355 0.955919 AACGCAGGCAACCTCTAAGC 60.956 55.000 0.00 0.00 37.17 3.09
355 356 2.456119 CGCAGGCAACCTCTAAGCG 61.456 63.158 2.29 2.29 36.36 4.68
356 357 1.079127 GCAGGCAACCTCTAAGCGA 60.079 57.895 0.00 0.00 37.17 4.93
357 358 0.462759 GCAGGCAACCTCTAAGCGAT 60.463 55.000 0.00 0.00 37.17 4.58
358 359 1.576356 CAGGCAACCTCTAAGCGATC 58.424 55.000 0.00 0.00 37.17 3.69
359 360 1.137872 CAGGCAACCTCTAAGCGATCT 59.862 52.381 0.00 0.00 37.17 2.75
360 361 1.410882 AGGCAACCTCTAAGCGATCTC 59.589 52.381 0.00 0.00 37.17 2.75
361 362 1.482278 GCAACCTCTAAGCGATCTCG 58.518 55.000 0.00 0.00 43.27 4.04
362 363 1.866063 GCAACCTCTAAGCGATCTCGG 60.866 57.143 1.34 0.00 40.23 4.63
363 364 0.386113 AACCTCTAAGCGATCTCGGC 59.614 55.000 1.34 0.00 40.23 5.54
364 365 1.287503 CCTCTAAGCGATCTCGGCC 59.712 63.158 0.00 0.00 40.23 6.13
365 366 1.287503 CTCTAAGCGATCTCGGCCC 59.712 63.158 0.00 0.00 40.23 5.80
366 367 2.148558 CTCTAAGCGATCTCGGCCCC 62.149 65.000 0.00 0.00 40.23 5.80
367 368 3.559657 CTAAGCGATCTCGGCCCCG 62.560 68.421 0.00 0.00 40.23 5.73
372 373 4.267503 GATCTCGGCCCCGACGAC 62.268 72.222 5.12 0.00 38.55 4.34
378 379 4.832608 GGCCCCGACGACCATGAC 62.833 72.222 0.00 0.00 0.00 3.06
379 380 4.077184 GCCCCGACGACCATGACA 62.077 66.667 0.00 0.00 0.00 3.58
380 381 2.900273 CCCCGACGACCATGACAT 59.100 61.111 0.00 0.00 0.00 3.06
381 382 1.227263 CCCCGACGACCATGACATC 60.227 63.158 0.00 0.00 0.00 3.06
382 383 1.676678 CCCCGACGACCATGACATCT 61.677 60.000 0.00 0.00 0.00 2.90
383 384 0.175760 CCCGACGACCATGACATCTT 59.824 55.000 0.00 0.00 0.00 2.40
384 385 1.280982 CCGACGACCATGACATCTTG 58.719 55.000 0.00 0.00 0.00 3.02
385 386 1.135112 CCGACGACCATGACATCTTGA 60.135 52.381 0.00 0.00 0.00 3.02
386 387 2.606108 CGACGACCATGACATCTTGAA 58.394 47.619 0.00 0.00 0.00 2.69
387 388 2.345641 CGACGACCATGACATCTTGAAC 59.654 50.000 0.00 0.00 0.00 3.18
388 389 2.337583 ACGACCATGACATCTTGAACG 58.662 47.619 0.00 0.00 0.00 3.95
389 390 2.029380 ACGACCATGACATCTTGAACGA 60.029 45.455 0.00 0.00 0.00 3.85
390 391 2.993220 CGACCATGACATCTTGAACGAA 59.007 45.455 0.00 0.00 0.00 3.85
391 392 3.618594 CGACCATGACATCTTGAACGAAT 59.381 43.478 0.00 0.00 0.00 3.34
392 393 4.259970 CGACCATGACATCTTGAACGAATC 60.260 45.833 0.00 0.00 0.00 2.52
393 394 3.618594 ACCATGACATCTTGAACGAATCG 59.381 43.478 0.00 0.00 0.00 3.34
394 395 3.865164 CCATGACATCTTGAACGAATCGA 59.135 43.478 10.55 0.00 0.00 3.59
395 396 4.509230 CCATGACATCTTGAACGAATCGAT 59.491 41.667 10.55 0.00 0.00 3.59
396 397 5.332883 CCATGACATCTTGAACGAATCGATC 60.333 44.000 10.55 7.98 0.00 3.69
397 398 4.743493 TGACATCTTGAACGAATCGATCA 58.257 39.130 11.50 11.50 36.92 2.92
398 399 5.167845 TGACATCTTGAACGAATCGATCAA 58.832 37.500 23.11 23.11 43.91 2.57
399 400 5.062183 TGACATCTTGAACGAATCGATCAAC 59.938 40.000 21.35 13.24 41.99 3.18
400 401 4.929211 ACATCTTGAACGAATCGATCAACA 59.071 37.500 21.35 13.85 41.99 3.33
401 402 5.408299 ACATCTTGAACGAATCGATCAACAA 59.592 36.000 21.35 14.03 41.99 2.83
402 403 5.264060 TCTTGAACGAATCGATCAACAAC 57.736 39.130 21.35 0.00 41.99 3.32
403 404 4.151689 TCTTGAACGAATCGATCAACAACC 59.848 41.667 21.35 0.00 41.99 3.77
404 405 2.739913 TGAACGAATCGATCAACAACCC 59.260 45.455 13.06 0.00 35.87 4.11
405 406 1.734163 ACGAATCGATCAACAACCCC 58.266 50.000 10.55 0.00 0.00 4.95
406 407 1.002659 ACGAATCGATCAACAACCCCA 59.997 47.619 10.55 0.00 0.00 4.96
407 408 2.080693 CGAATCGATCAACAACCCCAA 58.919 47.619 0.00 0.00 0.00 4.12
408 409 2.682856 CGAATCGATCAACAACCCCAAT 59.317 45.455 0.00 0.00 0.00 3.16
409 410 3.242739 CGAATCGATCAACAACCCCAATC 60.243 47.826 0.00 0.00 0.00 2.67
410 411 2.869101 TCGATCAACAACCCCAATCA 57.131 45.000 0.00 0.00 0.00 2.57
411 412 2.432444 TCGATCAACAACCCCAATCAC 58.568 47.619 0.00 0.00 0.00 3.06
412 413 2.158559 CGATCAACAACCCCAATCACA 58.841 47.619 0.00 0.00 0.00 3.58
413 414 2.095263 CGATCAACAACCCCAATCACAC 60.095 50.000 0.00 0.00 0.00 3.82
414 415 2.746279 TCAACAACCCCAATCACACT 57.254 45.000 0.00 0.00 0.00 3.55
415 416 3.866703 TCAACAACCCCAATCACACTA 57.133 42.857 0.00 0.00 0.00 2.74
416 417 4.380843 TCAACAACCCCAATCACACTAT 57.619 40.909 0.00 0.00 0.00 2.12
417 418 5.506730 TCAACAACCCCAATCACACTATA 57.493 39.130 0.00 0.00 0.00 1.31
418 419 5.882040 TCAACAACCCCAATCACACTATAA 58.118 37.500 0.00 0.00 0.00 0.98
419 420 6.307776 TCAACAACCCCAATCACACTATAAA 58.692 36.000 0.00 0.00 0.00 1.40
420 421 6.778069 TCAACAACCCCAATCACACTATAAAA 59.222 34.615 0.00 0.00 0.00 1.52
421 422 6.584185 ACAACCCCAATCACACTATAAAAC 57.416 37.500 0.00 0.00 0.00 2.43
422 423 5.479027 ACAACCCCAATCACACTATAAAACC 59.521 40.000 0.00 0.00 0.00 3.27
423 424 5.530176 ACCCCAATCACACTATAAAACCT 57.470 39.130 0.00 0.00 0.00 3.50
424 425 5.261216 ACCCCAATCACACTATAAAACCTG 58.739 41.667 0.00 0.00 0.00 4.00
425 426 4.644685 CCCCAATCACACTATAAAACCTGG 59.355 45.833 0.00 0.00 0.00 4.45
426 427 4.097892 CCCAATCACACTATAAAACCTGGC 59.902 45.833 0.00 0.00 0.00 4.85
427 428 4.097892 CCAATCACACTATAAAACCTGGCC 59.902 45.833 0.00 0.00 0.00 5.36
428 429 4.584638 ATCACACTATAAAACCTGGCCA 57.415 40.909 4.71 4.71 0.00 5.36
429 430 4.584638 TCACACTATAAAACCTGGCCAT 57.415 40.909 5.51 0.00 0.00 4.40
441 442 0.542702 CTGGCCATTGAAGTTGGGGT 60.543 55.000 5.51 0.00 34.66 4.95
446 447 2.029380 GCCATTGAAGTTGGGGTTGTAC 60.029 50.000 0.00 0.00 34.66 2.90
487 488 3.219928 GAGATCGCCCCAGCTCGA 61.220 66.667 0.00 0.00 39.17 4.04
488 489 3.206211 GAGATCGCCCCAGCTCGAG 62.206 68.421 8.45 8.45 38.17 4.04
489 490 4.959596 GATCGCCCCAGCTCGAGC 62.960 72.222 30.01 30.01 38.17 5.03
499 500 2.420890 GCTCGAGCTGGATGAGGG 59.579 66.667 29.88 0.00 38.21 4.30
500 501 2.420890 CTCGAGCTGGATGAGGGC 59.579 66.667 0.00 0.00 0.00 5.19
501 502 2.364186 TCGAGCTGGATGAGGGCA 60.364 61.111 0.00 0.00 0.00 5.36
502 503 1.756408 CTCGAGCTGGATGAGGGCAT 61.756 60.000 0.00 0.00 37.47 4.40
521 522 1.078143 GTGCTCGGAAAGGCCTGAT 60.078 57.895 5.69 0.00 0.00 2.90
528 529 0.329596 GGAAAGGCCTGATCACTGGT 59.670 55.000 5.69 0.00 37.43 4.00
530 531 0.329596 AAAGGCCTGATCACTGGTCC 59.670 55.000 5.69 4.63 39.95 4.46
542 543 1.071471 CTGGTCCTTGGCGTTGTCT 59.929 57.895 0.00 0.00 0.00 3.41
548 549 1.672356 CTTGGCGTTGTCTCCTGGG 60.672 63.158 0.00 0.00 0.00 4.45
557 558 0.768221 TGTCTCCTGGGACCTTGCTT 60.768 55.000 11.27 0.00 35.54 3.91
573 574 1.079073 CTTCTTGGGCCCCATGGTT 59.921 57.895 22.27 0.00 31.53 3.67
586 587 0.676782 CATGGTTCCAAGTCCGACCC 60.677 60.000 0.00 0.00 0.00 4.46
590 591 1.546998 GGTTCCAAGTCCGACCCATTT 60.547 52.381 0.00 0.00 0.00 2.32
591 592 2.235891 GTTCCAAGTCCGACCCATTTT 58.764 47.619 0.00 0.00 0.00 1.82
606 607 2.358898 CCATTTTAACATGCTCGAGGGG 59.641 50.000 15.58 0.00 0.00 4.79
607 608 3.278574 CATTTTAACATGCTCGAGGGGA 58.721 45.455 15.58 0.00 0.00 4.81
621 622 3.312799 GGGACCCGTTTCCCGTAT 58.687 61.111 0.00 0.00 46.24 3.06
634 635 0.104120 CCCGTATTGCTGACATCCGA 59.896 55.000 0.00 0.00 0.00 4.55
641 642 0.321346 TGCTGACATCCGATGTGTGT 59.679 50.000 18.84 0.00 45.03 3.72
653 654 2.346803 GATGTGTGTCGTGTTAGCCAT 58.653 47.619 0.00 0.00 0.00 4.40
678 679 2.055689 CTGCACCAGAGTGGGGACAA 62.056 60.000 0.00 0.00 46.22 3.18
688 689 3.691820 TGGGGACAAAACCACAACA 57.308 47.368 0.00 0.00 40.68 3.33
689 690 2.166907 TGGGGACAAAACCACAACAT 57.833 45.000 0.00 0.00 40.68 2.71
690 691 2.472029 TGGGGACAAAACCACAACATT 58.528 42.857 0.00 0.00 40.68 2.71
691 692 2.840651 TGGGGACAAAACCACAACATTT 59.159 40.909 0.00 0.00 40.68 2.32
692 693 3.264450 TGGGGACAAAACCACAACATTTT 59.736 39.130 0.00 0.00 40.68 1.82
693 694 4.263506 TGGGGACAAAACCACAACATTTTT 60.264 37.500 0.00 0.00 40.68 1.94
694 695 5.045869 TGGGGACAAAACCACAACATTTTTA 60.046 36.000 0.00 0.00 40.68 1.52
695 696 6.058833 GGGGACAAAACCACAACATTTTTAT 58.941 36.000 0.00 0.00 32.85 1.40
696 697 6.544197 GGGGACAAAACCACAACATTTTTATT 59.456 34.615 0.00 0.00 32.85 1.40
697 698 7.067615 GGGGACAAAACCACAACATTTTTATTT 59.932 33.333 0.00 0.00 32.85 1.40
705 706 5.333721 CCACAACATTTTTATTTTGGGCGAC 60.334 40.000 0.00 0.00 0.00 5.19
720 721 3.103911 GACGTTGCTCCACCGTCG 61.104 66.667 0.00 0.00 41.12 5.12
726 727 4.338539 GCTCCACCGTCGACACGT 62.339 66.667 17.16 7.95 45.17 4.49
731 732 1.724929 CACCGTCGACACGTCACTC 60.725 63.158 17.16 0.00 45.17 3.51
732 733 2.182181 ACCGTCGACACGTCACTCA 61.182 57.895 17.16 0.00 45.17 3.41
733 734 1.724929 CCGTCGACACGTCACTCAC 60.725 63.158 17.16 0.00 45.17 3.51
734 735 1.724929 CGTCGACACGTCACTCACC 60.725 63.158 17.16 0.00 41.42 4.02
735 736 1.724929 GTCGACACGTCACTCACCG 60.725 63.158 11.55 0.00 0.00 4.94
736 737 3.097728 CGACACGTCACTCACCGC 61.098 66.667 0.00 0.00 0.00 5.68
737 738 2.335369 GACACGTCACTCACCGCT 59.665 61.111 0.00 0.00 0.00 5.52
738 739 1.577922 GACACGTCACTCACCGCTA 59.422 57.895 0.00 0.00 0.00 4.26
739 740 0.728466 GACACGTCACTCACCGCTAC 60.728 60.000 0.00 0.00 0.00 3.58
742 743 0.801251 ACGTCACTCACCGCTACTAC 59.199 55.000 0.00 0.00 0.00 2.73
760 761 5.199024 ACTACGTACACACAACCAACATA 57.801 39.130 0.00 0.00 0.00 2.29
761 762 5.786311 ACTACGTACACACAACCAACATAT 58.214 37.500 0.00 0.00 0.00 1.78
762 763 6.225318 ACTACGTACACACAACCAACATATT 58.775 36.000 0.00 0.00 0.00 1.28
763 764 6.707161 ACTACGTACACACAACCAACATATTT 59.293 34.615 0.00 0.00 0.00 1.40
764 765 6.380095 ACGTACACACAACCAACATATTTT 57.620 33.333 0.00 0.00 0.00 1.82
765 766 6.797454 ACGTACACACAACCAACATATTTTT 58.203 32.000 0.00 0.00 0.00 1.94
800 801 4.835615 ACTATGCTCGAAGGTGGATCTATT 59.164 41.667 0.00 0.00 0.00 1.73
801 802 4.696479 ATGCTCGAAGGTGGATCTATTT 57.304 40.909 0.00 0.00 0.00 1.40
802 803 4.487714 TGCTCGAAGGTGGATCTATTTT 57.512 40.909 0.00 0.00 0.00 1.82
803 804 4.843728 TGCTCGAAGGTGGATCTATTTTT 58.156 39.130 0.00 0.00 0.00 1.94
858 859 1.708341 AAGAGCAACAACAAGGCCAT 58.292 45.000 5.01 0.00 0.00 4.40
859 860 1.708341 AGAGCAACAACAAGGCCATT 58.292 45.000 5.01 0.00 0.00 3.16
861 862 2.137523 GAGCAACAACAAGGCCATTTG 58.862 47.619 5.01 7.53 0.00 2.32
863 864 1.866601 GCAACAACAAGGCCATTTGTC 59.133 47.619 14.85 3.10 40.24 3.18
865 866 0.673437 ACAACAAGGCCATTTGTCGG 59.327 50.000 10.55 8.81 40.24 4.79
871 918 4.133796 GCCATTTGTCGGCCCAGC 62.134 66.667 0.00 0.00 44.22 4.85
876 923 0.037590 ATTTGTCGGCCCAGCTAACA 59.962 50.000 0.00 0.00 0.00 2.41
890 937 1.453155 CTAACACAGCCCACCATCAC 58.547 55.000 0.00 0.00 0.00 3.06
901 948 1.533625 CACCATCACACAATTCCGGT 58.466 50.000 0.00 0.00 0.00 5.28
906 953 2.163818 TCACACAATTCCGGTCACTC 57.836 50.000 0.00 0.00 0.00 3.51
907 954 1.156736 CACACAATTCCGGTCACTCC 58.843 55.000 0.00 0.00 0.00 3.85
908 955 0.762418 ACACAATTCCGGTCACTCCA 59.238 50.000 0.00 0.00 35.57 3.86
909 956 1.142060 ACACAATTCCGGTCACTCCAA 59.858 47.619 0.00 0.00 35.57 3.53
910 957 2.226330 CACAATTCCGGTCACTCCAAA 58.774 47.619 0.00 0.00 35.57 3.28
911 958 2.621055 CACAATTCCGGTCACTCCAAAA 59.379 45.455 0.00 0.00 35.57 2.44
912 959 3.067461 CACAATTCCGGTCACTCCAAAAA 59.933 43.478 0.00 0.00 35.57 1.94
913 960 3.067601 ACAATTCCGGTCACTCCAAAAAC 59.932 43.478 0.00 0.00 35.57 2.43
914 961 2.421751 TTCCGGTCACTCCAAAAACA 57.578 45.000 0.00 0.00 35.57 2.83
915 962 2.421751 TCCGGTCACTCCAAAAACAA 57.578 45.000 0.00 0.00 35.57 2.83
916 963 2.724454 TCCGGTCACTCCAAAAACAAA 58.276 42.857 0.00 0.00 35.57 2.83
917 964 3.090037 TCCGGTCACTCCAAAAACAAAA 58.910 40.909 0.00 0.00 35.57 2.44
918 965 3.510360 TCCGGTCACTCCAAAAACAAAAA 59.490 39.130 0.00 0.00 35.57 1.94
938 985 5.675684 AAAAACATCCCACACTTGACTTT 57.324 34.783 0.00 0.00 0.00 2.66
939 986 4.654091 AAACATCCCACACTTGACTTTG 57.346 40.909 0.00 0.00 0.00 2.77
940 987 1.956477 ACATCCCACACTTGACTTTGC 59.044 47.619 0.00 0.00 0.00 3.68
941 988 1.270550 CATCCCACACTTGACTTTGCC 59.729 52.381 0.00 0.00 0.00 4.52
942 989 0.817634 TCCCACACTTGACTTTGCCG 60.818 55.000 0.00 0.00 0.00 5.69
943 990 1.101049 CCCACACTTGACTTTGCCGT 61.101 55.000 0.00 0.00 0.00 5.68
944 991 0.738389 CCACACTTGACTTTGCCGTT 59.262 50.000 0.00 0.00 0.00 4.44
945 992 1.134175 CCACACTTGACTTTGCCGTTT 59.866 47.619 0.00 0.00 0.00 3.60
946 993 2.450160 CACACTTGACTTTGCCGTTTC 58.550 47.619 0.00 0.00 0.00 2.78
947 994 1.404035 ACACTTGACTTTGCCGTTTCC 59.596 47.619 0.00 0.00 0.00 3.13
948 995 1.029681 ACTTGACTTTGCCGTTTCCC 58.970 50.000 0.00 0.00 0.00 3.97
949 996 1.318576 CTTGACTTTGCCGTTTCCCT 58.681 50.000 0.00 0.00 0.00 4.20
950 997 1.266989 CTTGACTTTGCCGTTTCCCTC 59.733 52.381 0.00 0.00 0.00 4.30
951 998 0.181587 TGACTTTGCCGTTTCCCTCA 59.818 50.000 0.00 0.00 0.00 3.86
952 999 1.314730 GACTTTGCCGTTTCCCTCAA 58.685 50.000 0.00 0.00 0.00 3.02
953 1000 1.679153 GACTTTGCCGTTTCCCTCAAA 59.321 47.619 0.00 0.00 0.00 2.69
954 1001 2.100087 GACTTTGCCGTTTCCCTCAAAA 59.900 45.455 0.00 0.00 0.00 2.44
955 1002 2.498078 ACTTTGCCGTTTCCCTCAAAAA 59.502 40.909 0.00 0.00 0.00 1.94
984 1031 1.852067 CTTGACTTTGCCGTTCCCCG 61.852 60.000 0.00 0.00 0.00 5.73
985 1032 2.031465 GACTTTGCCGTTCCCCGA 59.969 61.111 0.00 0.00 39.56 5.14
1042 1089 4.824515 CCCTCCTCCCGCTCGTCT 62.825 72.222 0.00 0.00 0.00 4.18
1099 1409 1.523258 CATGCCTTCTGCTCCTCCG 60.523 63.158 0.00 0.00 42.00 4.63
1539 1849 0.681887 TCGAGACCATGCCGTCCTTA 60.682 55.000 0.00 0.00 32.91 2.69
1550 1860 0.473886 CCGTCCTTATCCATCCCCCT 60.474 60.000 0.00 0.00 0.00 4.79
1935 2245 2.700371 TGATATGGAGAGTGCACGGAAT 59.300 45.455 12.01 5.10 0.00 3.01
1936 2246 3.895041 TGATATGGAGAGTGCACGGAATA 59.105 43.478 12.01 7.15 0.00 1.75
2172 2482 1.294780 GGAGGATATGGCAGAGCGG 59.705 63.158 0.00 0.00 0.00 5.52
2235 2545 0.592637 CGACATTGTGCAAAGCTGGA 59.407 50.000 0.00 0.00 0.00 3.86
2317 2627 2.809601 CGAGGCAGTACGGTGTGC 60.810 66.667 8.38 8.38 39.08 4.57
2598 2908 2.015587 GAGGCTGCAAAGGAGATTCTG 58.984 52.381 0.50 0.00 0.00 3.02
2777 3087 1.987770 CATGGTGTCGCTTTTCAATGC 59.012 47.619 0.00 0.00 0.00 3.56
2841 3151 2.766828 CGAGAAGGGGGTTACTGAGAAT 59.233 50.000 0.00 0.00 0.00 2.40
2848 3158 4.599241 AGGGGGTTACTGAGAATATGGATG 59.401 45.833 0.00 0.00 0.00 3.51
3018 3328 2.827322 ACATAAGCTGGCTGATTTTGCA 59.173 40.909 11.43 0.00 0.00 4.08
3033 3343 0.608035 TTGCATTGGACCGGGACTTC 60.608 55.000 6.32 0.00 0.00 3.01
3243 3553 5.725490 AGGATCTTGGTAGAGAATGGATCT 58.275 41.667 0.00 0.00 42.61 2.75
3267 3577 1.970640 ACATCCAAGAGGGGCAAAAAC 59.029 47.619 0.00 0.00 37.22 2.43
3314 3625 4.701651 TCAGAATTCATGGGAGATCCTG 57.298 45.455 8.44 0.00 36.20 3.86
3366 3679 6.892310 AATCAGCTCTTTGTTTGTTTTGTC 57.108 33.333 0.00 0.00 0.00 3.18
3422 3740 4.767578 TCATCCTAGCTCAAGCAAGATT 57.232 40.909 4.59 0.00 45.16 2.40
3477 3796 5.818136 TTAATCTTGCACCATGTCTTAGC 57.182 39.130 0.00 0.00 0.00 3.09
3510 3830 8.192774 ACATGTTTAATAATTGAGGCAGATGTG 58.807 33.333 0.00 0.00 0.00 3.21
3604 3926 8.056407 ACTAAAGATAGCCCAGAATTTTGTTC 57.944 34.615 0.00 0.00 31.96 3.18
3653 3984 4.357142 CTTTGATCCACATTGTATGCTGC 58.643 43.478 0.00 0.00 0.00 5.25
3787 4120 1.938577 CCACTGATGATGTAGCTGCAC 59.061 52.381 6.66 1.98 0.00 4.57
3844 4177 2.927477 TGATAGAAAACCGCAGCTTACG 59.073 45.455 0.00 0.00 0.00 3.18
3926 4259 5.277011 GCAGATGCTTTTCTTTGTTCCAAAC 60.277 40.000 0.00 0.00 38.21 2.93
3997 4365 7.268199 TGAACAATAAGATCTCATTGATGGC 57.732 36.000 22.99 10.40 36.00 4.40
4000 4369 7.893124 ACAATAAGATCTCATTGATGGCTTT 57.107 32.000 22.99 0.00 36.00 3.51
4002 4371 4.650754 AAGATCTCATTGATGGCTTTGC 57.349 40.909 0.00 0.00 35.14 3.68
4006 4375 2.490509 TCTCATTGATGGCTTTGCAGTG 59.509 45.455 0.00 0.00 0.00 3.66
4071 4501 6.759827 GGAAAAAGTTTGGTTTTCTAGGAACC 59.240 38.462 17.20 17.20 45.39 3.62
4151 4585 4.526970 TCAGAAGCCATATTCCTTGGAAC 58.473 43.478 4.00 0.00 36.26 3.62
4208 4643 1.203440 AGCTCTGGGGACTAAAGGGAA 60.203 52.381 0.00 0.00 0.00 3.97
4237 4672 8.553085 TTACTGGAGATTGAGAATGATTAGGA 57.447 34.615 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.467804 GGAGATGGGCCAGAAGAGTC 59.532 60.000 13.78 2.96 0.00 3.36
1 2 1.333636 CGGAGATGGGCCAGAAGAGT 61.334 60.000 13.78 0.00 0.00 3.24
2 3 1.445095 CGGAGATGGGCCAGAAGAG 59.555 63.158 13.78 0.00 0.00 2.85
3 4 2.066393 CCGGAGATGGGCCAGAAGA 61.066 63.158 13.78 0.00 0.00 2.87
4 5 1.048724 TACCGGAGATGGGCCAGAAG 61.049 60.000 13.78 1.14 0.00 2.85
5 6 1.002403 TACCGGAGATGGGCCAGAA 59.998 57.895 13.78 0.00 0.00 3.02
6 7 1.760875 GTACCGGAGATGGGCCAGA 60.761 63.158 13.78 0.00 0.00 3.86
7 8 1.749334 GAGTACCGGAGATGGGCCAG 61.749 65.000 13.78 0.00 0.00 4.85
8 9 1.760875 GAGTACCGGAGATGGGCCA 60.761 63.158 9.61 9.61 0.00 5.36
9 10 2.508751 GGAGTACCGGAGATGGGCC 61.509 68.421 9.46 0.00 0.00 5.80
10 11 3.139565 GGAGTACCGGAGATGGGC 58.860 66.667 9.46 0.00 0.00 5.36
20 21 0.108281 GAAGAAGCCCACGGAGTACC 60.108 60.000 0.00 0.00 41.61 3.34
21 22 0.896226 AGAAGAAGCCCACGGAGTAC 59.104 55.000 0.00 0.00 41.61 2.73
22 23 0.895530 CAGAAGAAGCCCACGGAGTA 59.104 55.000 0.00 0.00 41.61 2.59
24 25 1.078848 CCAGAAGAAGCCCACGGAG 60.079 63.158 0.00 0.00 0.00 4.63
25 26 1.827399 GACCAGAAGAAGCCCACGGA 61.827 60.000 0.00 0.00 0.00 4.69
26 27 1.376037 GACCAGAAGAAGCCCACGG 60.376 63.158 0.00 0.00 0.00 4.94
27 28 0.895530 TAGACCAGAAGAAGCCCACG 59.104 55.000 0.00 0.00 0.00 4.94
28 29 3.418684 TTTAGACCAGAAGAAGCCCAC 57.581 47.619 0.00 0.00 0.00 4.61
29 30 4.447138 TTTTTAGACCAGAAGAAGCCCA 57.553 40.909 0.00 0.00 0.00 5.36
30 31 5.010282 TCATTTTTAGACCAGAAGAAGCCC 58.990 41.667 0.00 0.00 0.00 5.19
31 32 6.601217 AGATCATTTTTAGACCAGAAGAAGCC 59.399 38.462 0.00 0.00 0.00 4.35
32 33 7.201688 GGAGATCATTTTTAGACCAGAAGAAGC 60.202 40.741 0.00 0.00 0.00 3.86
33 34 7.010923 CGGAGATCATTTTTAGACCAGAAGAAG 59.989 40.741 0.00 0.00 0.00 2.85
34 35 6.818644 CGGAGATCATTTTTAGACCAGAAGAA 59.181 38.462 0.00 0.00 0.00 2.52
35 36 6.070767 ACGGAGATCATTTTTAGACCAGAAGA 60.071 38.462 0.00 0.00 0.00 2.87
36 37 6.036517 CACGGAGATCATTTTTAGACCAGAAG 59.963 42.308 0.00 0.00 0.00 2.85
37 38 5.874810 CACGGAGATCATTTTTAGACCAGAA 59.125 40.000 0.00 0.00 0.00 3.02
38 39 5.186992 TCACGGAGATCATTTTTAGACCAGA 59.813 40.000 0.00 0.00 0.00 3.86
39 40 5.419542 TCACGGAGATCATTTTTAGACCAG 58.580 41.667 0.00 0.00 0.00 4.00
40 41 5.414789 TCACGGAGATCATTTTTAGACCA 57.585 39.130 0.00 0.00 0.00 4.02
41 42 6.737254 TTTCACGGAGATCATTTTTAGACC 57.263 37.500 0.00 0.00 0.00 3.85
42 43 9.278734 GAAATTTCACGGAGATCATTTTTAGAC 57.721 33.333 13.40 0.00 0.00 2.59
43 44 9.008965 TGAAATTTCACGGAGATCATTTTTAGA 57.991 29.630 16.91 0.00 31.01 2.10
44 45 9.282247 CTGAAATTTCACGGAGATCATTTTTAG 57.718 33.333 16.91 0.00 32.90 1.85
45 46 8.243426 CCTGAAATTTCACGGAGATCATTTTTA 58.757 33.333 22.28 0.00 32.90 1.52
46 47 7.092716 CCTGAAATTTCACGGAGATCATTTTT 58.907 34.615 22.28 0.00 32.90 1.94
47 48 6.209391 ACCTGAAATTTCACGGAGATCATTTT 59.791 34.615 28.53 11.38 32.97 1.82
48 49 5.711976 ACCTGAAATTTCACGGAGATCATTT 59.288 36.000 28.53 11.86 32.97 2.32
49 50 5.256474 ACCTGAAATTTCACGGAGATCATT 58.744 37.500 28.53 12.35 32.97 2.57
50 51 4.848357 ACCTGAAATTTCACGGAGATCAT 58.152 39.130 28.53 12.84 32.97 2.45
51 52 4.253685 GACCTGAAATTTCACGGAGATCA 58.746 43.478 28.53 6.98 32.97 2.92
52 53 4.253685 TGACCTGAAATTTCACGGAGATC 58.746 43.478 28.53 20.51 32.97 2.75
53 54 4.286297 TGACCTGAAATTTCACGGAGAT 57.714 40.909 28.53 15.52 32.97 2.75
54 55 3.762407 TGACCTGAAATTTCACGGAGA 57.238 42.857 28.53 17.80 32.97 3.71
55 56 5.156355 CAATTGACCTGAAATTTCACGGAG 58.844 41.667 28.53 16.56 32.97 4.63
56 57 4.022416 CCAATTGACCTGAAATTTCACGGA 60.022 41.667 28.53 15.70 32.97 4.69
57 58 4.022416 TCCAATTGACCTGAAATTTCACGG 60.022 41.667 23.81 23.81 34.07 4.94
58 59 4.917415 GTCCAATTGACCTGAAATTTCACG 59.083 41.667 16.91 15.02 38.09 4.35
59 60 6.089249 AGTCCAATTGACCTGAAATTTCAC 57.911 37.500 16.91 8.39 45.68 3.18
60 61 5.243730 GGAGTCCAATTGACCTGAAATTTCA 59.756 40.000 19.45 19.45 45.68 2.69
61 62 5.619981 CGGAGTCCAATTGACCTGAAATTTC 60.620 44.000 11.41 11.41 45.68 2.17
62 63 4.218417 CGGAGTCCAATTGACCTGAAATTT 59.782 41.667 10.49 0.00 45.68 1.82
63 64 3.758554 CGGAGTCCAATTGACCTGAAATT 59.241 43.478 10.49 0.00 45.68 1.82
64 65 3.244911 ACGGAGTCCAATTGACCTGAAAT 60.245 43.478 10.49 0.00 45.68 2.17
65 66 2.105821 ACGGAGTCCAATTGACCTGAAA 59.894 45.455 10.49 0.00 45.68 2.69
66 67 1.697432 ACGGAGTCCAATTGACCTGAA 59.303 47.619 10.49 0.00 45.68 3.02
67 68 1.348064 ACGGAGTCCAATTGACCTGA 58.652 50.000 10.49 0.00 45.68 3.86
68 69 2.185004 AACGGAGTCCAATTGACCTG 57.815 50.000 10.49 5.67 45.00 4.00
69 70 2.504367 CAAACGGAGTCCAATTGACCT 58.496 47.619 15.62 1.47 45.00 3.85
70 71 1.539827 CCAAACGGAGTCCAATTGACC 59.460 52.381 20.30 4.16 45.00 4.02
71 72 2.227194 ACCAAACGGAGTCCAATTGAC 58.773 47.619 20.30 3.53 45.00 3.18
72 73 2.649531 ACCAAACGGAGTCCAATTGA 57.350 45.000 20.30 0.00 45.00 2.57
73 74 3.726291 AAACCAAACGGAGTCCAATTG 57.274 42.857 10.49 12.80 45.00 2.32
74 75 3.069016 GGAAAACCAAACGGAGTCCAATT 59.931 43.478 10.49 0.00 45.00 2.32
75 76 2.626266 GGAAAACCAAACGGAGTCCAAT 59.374 45.455 10.49 0.00 45.00 3.16
76 77 2.025898 GGAAAACCAAACGGAGTCCAA 58.974 47.619 10.49 0.00 45.00 3.53
77 78 1.213430 AGGAAAACCAAACGGAGTCCA 59.787 47.619 10.49 0.00 45.00 4.02
78 79 1.977056 AGGAAAACCAAACGGAGTCC 58.023 50.000 0.00 0.00 45.00 3.85
79 80 4.097437 AGAAAAGGAAAACCAAACGGAGTC 59.903 41.667 0.00 0.00 45.00 3.36
81 82 4.359706 CAGAAAAGGAAAACCAAACGGAG 58.640 43.478 0.00 0.00 0.00 4.63
82 83 3.429684 GCAGAAAAGGAAAACCAAACGGA 60.430 43.478 0.00 0.00 0.00 4.69
83 84 2.863740 GCAGAAAAGGAAAACCAAACGG 59.136 45.455 0.00 0.00 0.00 4.44
84 85 2.533942 CGCAGAAAAGGAAAACCAAACG 59.466 45.455 0.00 0.00 0.00 3.60
85 86 3.776340 TCGCAGAAAAGGAAAACCAAAC 58.224 40.909 0.00 0.00 0.00 2.93
86 87 4.664150 ATCGCAGAAAAGGAAAACCAAA 57.336 36.364 0.00 0.00 43.58 3.28
87 88 4.825085 AGTATCGCAGAAAAGGAAAACCAA 59.175 37.500 0.00 0.00 43.58 3.67
88 89 4.394729 AGTATCGCAGAAAAGGAAAACCA 58.605 39.130 0.00 0.00 43.58 3.67
89 90 4.454504 TGAGTATCGCAGAAAAGGAAAACC 59.545 41.667 0.00 0.00 43.58 3.27
90 91 5.607119 TGAGTATCGCAGAAAAGGAAAAC 57.393 39.130 0.00 0.00 43.58 2.43
91 92 6.627395 TTTGAGTATCGCAGAAAAGGAAAA 57.373 33.333 0.00 0.00 43.58 2.29
92 93 6.627395 TTTTGAGTATCGCAGAAAAGGAAA 57.373 33.333 0.00 0.00 43.58 3.13
93 94 6.627395 TTTTTGAGTATCGCAGAAAAGGAA 57.373 33.333 0.00 0.00 43.58 3.36
94 95 6.817765 ATTTTTGAGTATCGCAGAAAAGGA 57.182 33.333 0.00 0.00 43.58 3.36
95 96 8.450964 TCTTATTTTTGAGTATCGCAGAAAAGG 58.549 33.333 0.00 0.00 43.58 3.11
96 97 9.825972 TTCTTATTTTTGAGTATCGCAGAAAAG 57.174 29.630 0.00 0.00 43.58 2.27
123 124 4.344968 AGCCTAATGCCAGTTTCTGTTTTT 59.655 37.500 0.00 0.00 42.71 1.94
124 125 3.897505 AGCCTAATGCCAGTTTCTGTTTT 59.102 39.130 0.00 0.00 42.71 2.43
125 126 3.500343 AGCCTAATGCCAGTTTCTGTTT 58.500 40.909 0.00 0.00 42.71 2.83
126 127 3.084786 GAGCCTAATGCCAGTTTCTGTT 58.915 45.455 0.00 0.00 42.71 3.16
127 128 2.307098 AGAGCCTAATGCCAGTTTCTGT 59.693 45.455 0.00 0.00 42.71 3.41
128 129 2.996631 AGAGCCTAATGCCAGTTTCTG 58.003 47.619 0.00 0.00 42.71 3.02
129 130 4.226168 ACTTAGAGCCTAATGCCAGTTTCT 59.774 41.667 0.00 0.00 42.71 2.52
130 131 4.518249 ACTTAGAGCCTAATGCCAGTTTC 58.482 43.478 0.00 0.00 42.71 2.78
131 132 4.576330 ACTTAGAGCCTAATGCCAGTTT 57.424 40.909 0.00 0.00 42.71 2.66
132 133 4.576330 AACTTAGAGCCTAATGCCAGTT 57.424 40.909 0.00 0.00 42.71 3.16
133 134 5.693769 TTAACTTAGAGCCTAATGCCAGT 57.306 39.130 0.00 0.00 42.71 4.00
134 135 6.876257 CCTATTAACTTAGAGCCTAATGCCAG 59.124 42.308 0.00 0.00 42.71 4.85
135 136 6.329197 ACCTATTAACTTAGAGCCTAATGCCA 59.671 38.462 0.00 0.00 42.71 4.92
136 137 6.770542 ACCTATTAACTTAGAGCCTAATGCC 58.229 40.000 0.00 0.00 42.71 4.40
137 138 9.425577 CTAACCTATTAACTTAGAGCCTAATGC 57.574 37.037 0.00 0.00 41.71 3.56
140 141 9.933240 AGACTAACCTATTAACTTAGAGCCTAA 57.067 33.333 0.00 0.00 0.00 2.69
141 142 9.571816 GAGACTAACCTATTAACTTAGAGCCTA 57.428 37.037 0.00 0.00 0.00 3.93
142 143 8.060075 TGAGACTAACCTATTAACTTAGAGCCT 58.940 37.037 0.00 0.00 0.00 4.58
143 144 8.235359 TGAGACTAACCTATTAACTTAGAGCC 57.765 38.462 0.00 0.00 0.00 4.70
189 190 9.985730 CAAACTTGGATGGTTATATGCATTTAT 57.014 29.630 3.54 0.00 0.00 1.40
190 191 9.194972 TCAAACTTGGATGGTTATATGCATTTA 57.805 29.630 3.54 0.00 0.00 1.40
191 192 8.076910 TCAAACTTGGATGGTTATATGCATTT 57.923 30.769 3.54 0.00 0.00 2.32
192 193 7.658525 TCAAACTTGGATGGTTATATGCATT 57.341 32.000 3.54 0.00 0.00 3.56
193 194 7.844493 ATCAAACTTGGATGGTTATATGCAT 57.156 32.000 3.79 3.79 0.00 3.96
194 195 8.759481 TTATCAAACTTGGATGGTTATATGCA 57.241 30.769 0.00 0.00 0.00 3.96
238 239 9.027129 CGTCTCCAACGTATCTATAATTTTTGA 57.973 33.333 0.00 0.00 46.42 2.69
255 256 1.990563 CACCGTTGATACGTCTCCAAC 59.009 52.381 14.05 14.05 46.20 3.77
256 257 1.887854 TCACCGTTGATACGTCTCCAA 59.112 47.619 0.00 0.00 46.20 3.53
257 258 1.536940 TCACCGTTGATACGTCTCCA 58.463 50.000 0.00 0.00 46.20 3.86
258 259 2.098607 TCATCACCGTTGATACGTCTCC 59.901 50.000 0.00 0.00 46.20 3.71
259 260 3.416119 TCATCACCGTTGATACGTCTC 57.584 47.619 0.00 0.00 46.20 3.36
260 261 3.490933 CCATCATCACCGTTGATACGTCT 60.491 47.826 0.00 0.00 46.20 4.18
261 262 2.794910 CCATCATCACCGTTGATACGTC 59.205 50.000 0.00 0.00 46.20 4.34
262 263 2.821546 CCATCATCACCGTTGATACGT 58.178 47.619 0.00 0.00 46.20 3.57
263 264 1.526887 GCCATCATCACCGTTGATACG 59.473 52.381 0.00 0.00 40.79 3.06
264 265 2.560504 TGCCATCATCACCGTTGATAC 58.439 47.619 0.00 0.00 40.79 2.24
265 266 2.998316 TGCCATCATCACCGTTGATA 57.002 45.000 0.00 0.00 40.79 2.15
266 267 2.127271 TTGCCATCATCACCGTTGAT 57.873 45.000 0.00 0.00 43.80 2.57
267 268 2.127271 ATTGCCATCATCACCGTTGA 57.873 45.000 0.00 0.00 35.73 3.18
268 269 4.292599 CATTATTGCCATCATCACCGTTG 58.707 43.478 0.00 0.00 0.00 4.10
269 270 3.318839 CCATTATTGCCATCATCACCGTT 59.681 43.478 0.00 0.00 0.00 4.44
270 271 2.886523 CCATTATTGCCATCATCACCGT 59.113 45.455 0.00 0.00 0.00 4.83
271 272 2.352030 GCCATTATTGCCATCATCACCG 60.352 50.000 0.00 0.00 0.00 4.94
272 273 2.352030 CGCCATTATTGCCATCATCACC 60.352 50.000 0.00 0.00 0.00 4.02
273 274 2.352030 CCGCCATTATTGCCATCATCAC 60.352 50.000 0.00 0.00 0.00 3.06
274 275 1.887854 CCGCCATTATTGCCATCATCA 59.112 47.619 0.00 0.00 0.00 3.07
275 276 1.203052 CCCGCCATTATTGCCATCATC 59.797 52.381 0.00 0.00 0.00 2.92
276 277 1.203038 TCCCGCCATTATTGCCATCAT 60.203 47.619 0.00 0.00 0.00 2.45
277 278 0.184692 TCCCGCCATTATTGCCATCA 59.815 50.000 0.00 0.00 0.00 3.07
278 279 1.000274 GTTCCCGCCATTATTGCCATC 60.000 52.381 0.00 0.00 0.00 3.51
279 280 1.039856 GTTCCCGCCATTATTGCCAT 58.960 50.000 0.00 0.00 0.00 4.40
280 281 1.380403 CGTTCCCGCCATTATTGCCA 61.380 55.000 0.00 0.00 0.00 4.92
281 282 1.358759 CGTTCCCGCCATTATTGCC 59.641 57.895 0.00 0.00 0.00 4.52
282 283 0.028902 GACGTTCCCGCCATTATTGC 59.971 55.000 0.00 0.00 37.70 3.56
283 284 1.374560 TGACGTTCCCGCCATTATTG 58.625 50.000 0.00 0.00 37.70 1.90
284 285 2.116827 TTGACGTTCCCGCCATTATT 57.883 45.000 0.00 0.00 37.70 1.40
285 286 2.341846 ATTGACGTTCCCGCCATTAT 57.658 45.000 0.00 0.00 37.70 1.28
286 287 2.828877 CTATTGACGTTCCCGCCATTA 58.171 47.619 0.00 0.00 37.70 1.90
287 288 1.663695 CTATTGACGTTCCCGCCATT 58.336 50.000 0.00 0.00 37.70 3.16
288 289 0.814010 GCTATTGACGTTCCCGCCAT 60.814 55.000 0.00 0.00 37.70 4.40
289 290 1.448893 GCTATTGACGTTCCCGCCA 60.449 57.895 0.00 0.00 37.70 5.69
290 291 1.022451 TTGCTATTGACGTTCCCGCC 61.022 55.000 0.00 0.00 37.70 6.13
291 292 1.014352 ATTGCTATTGACGTTCCCGC 58.986 50.000 0.00 0.00 37.70 6.13
292 293 1.330521 CCATTGCTATTGACGTTCCCG 59.669 52.381 0.00 0.00 40.83 5.14
293 294 1.065551 GCCATTGCTATTGACGTTCCC 59.934 52.381 0.00 0.00 33.53 3.97
294 295 1.268032 CGCCATTGCTATTGACGTTCC 60.268 52.381 0.00 0.00 34.43 3.62
295 296 1.268032 CCGCCATTGCTATTGACGTTC 60.268 52.381 0.00 0.00 34.43 3.95
296 297 0.732571 CCGCCATTGCTATTGACGTT 59.267 50.000 0.00 0.00 34.43 3.99
297 298 1.714899 GCCGCCATTGCTATTGACGT 61.715 55.000 0.00 0.00 34.43 4.34
298 299 1.009675 GCCGCCATTGCTATTGACG 60.010 57.895 0.00 0.00 34.43 4.35
299 300 0.455410 TTGCCGCCATTGCTATTGAC 59.545 50.000 0.00 0.00 34.43 3.18
300 301 0.455410 GTTGCCGCCATTGCTATTGA 59.545 50.000 0.00 0.00 34.43 2.57
301 302 0.866906 CGTTGCCGCCATTGCTATTG 60.867 55.000 0.00 0.00 34.43 1.90
302 303 1.433064 CGTTGCCGCCATTGCTATT 59.567 52.632 0.00 0.00 34.43 1.73
303 304 2.480610 CCGTTGCCGCCATTGCTAT 61.481 57.895 0.00 0.00 34.43 2.97
304 305 3.130819 CCGTTGCCGCCATTGCTA 61.131 61.111 0.00 0.00 34.43 3.49
307 308 3.646023 ATTGCCGTTGCCGCCATTG 62.646 57.895 0.00 0.00 36.33 2.82
308 309 3.355203 GATTGCCGTTGCCGCCATT 62.355 57.895 0.00 0.00 36.33 3.16
309 310 3.825611 GATTGCCGTTGCCGCCAT 61.826 61.111 0.00 0.00 36.33 4.40
314 315 2.828549 ATCGGGATTGCCGTTGCC 60.829 61.111 16.55 0.00 36.33 4.52
315 316 2.112198 TCATCGGGATTGCCGTTGC 61.112 57.895 19.34 0.00 38.26 4.17
316 317 1.024046 TGTCATCGGGATTGCCGTTG 61.024 55.000 18.39 18.39 33.83 4.10
317 318 0.322098 TTGTCATCGGGATTGCCGTT 60.322 50.000 16.55 5.36 33.83 4.44
318 319 1.024579 GTTGTCATCGGGATTGCCGT 61.025 55.000 16.55 1.27 33.83 5.68
319 320 1.721487 GTTGTCATCGGGATTGCCG 59.279 57.895 10.75 10.75 33.83 5.69
320 321 1.721487 CGTTGTCATCGGGATTGCC 59.279 57.895 0.00 0.00 0.00 4.52
321 322 1.062525 GCGTTGTCATCGGGATTGC 59.937 57.895 5.51 0.00 0.00 3.56
322 323 0.374758 CTGCGTTGTCATCGGGATTG 59.625 55.000 5.51 0.00 0.00 2.67
323 324 0.744414 CCTGCGTTGTCATCGGGATT 60.744 55.000 5.51 0.00 0.00 3.01
324 325 1.153369 CCTGCGTTGTCATCGGGAT 60.153 57.895 5.51 0.00 0.00 3.85
325 326 2.264480 CCTGCGTTGTCATCGGGA 59.736 61.111 5.51 0.00 0.00 5.14
326 327 3.499737 GCCTGCGTTGTCATCGGG 61.500 66.667 5.51 0.71 0.00 5.14
327 328 2.324330 TTGCCTGCGTTGTCATCGG 61.324 57.895 5.51 0.00 0.00 4.18
328 329 1.154413 GTTGCCTGCGTTGTCATCG 60.154 57.895 0.00 0.00 0.00 3.84
329 330 1.210155 GGTTGCCTGCGTTGTCATC 59.790 57.895 0.00 0.00 0.00 2.92
330 331 1.228245 AGGTTGCCTGCGTTGTCAT 60.228 52.632 0.00 0.00 29.57 3.06
331 332 1.891919 GAGGTTGCCTGCGTTGTCA 60.892 57.895 0.00 0.00 31.76 3.58
332 333 0.320421 TAGAGGTTGCCTGCGTTGTC 60.320 55.000 0.00 0.00 31.76 3.18
333 334 0.107831 TTAGAGGTTGCCTGCGTTGT 59.892 50.000 0.00 0.00 31.76 3.32
334 335 0.798776 CTTAGAGGTTGCCTGCGTTG 59.201 55.000 0.00 0.00 31.76 4.10
335 336 0.955919 GCTTAGAGGTTGCCTGCGTT 60.956 55.000 0.00 0.00 31.76 4.84
336 337 1.376037 GCTTAGAGGTTGCCTGCGT 60.376 57.895 0.00 0.00 31.76 5.24
337 338 2.456119 CGCTTAGAGGTTGCCTGCG 61.456 63.158 3.83 3.83 36.36 5.18
338 339 0.462759 ATCGCTTAGAGGTTGCCTGC 60.463 55.000 0.00 0.00 31.76 4.85
339 340 1.137872 AGATCGCTTAGAGGTTGCCTG 59.862 52.381 0.00 0.00 31.76 4.85
340 341 1.410882 GAGATCGCTTAGAGGTTGCCT 59.589 52.381 0.00 0.00 36.03 4.75
341 342 1.859383 GAGATCGCTTAGAGGTTGCC 58.141 55.000 0.00 0.00 0.00 4.52
342 343 1.482278 CGAGATCGCTTAGAGGTTGC 58.518 55.000 0.00 0.00 0.00 4.17
343 344 1.866063 GCCGAGATCGCTTAGAGGTTG 60.866 57.143 0.00 0.00 38.18 3.77
344 345 0.386113 GCCGAGATCGCTTAGAGGTT 59.614 55.000 0.00 0.00 38.18 3.50
345 346 1.457009 GGCCGAGATCGCTTAGAGGT 61.457 60.000 0.00 0.00 38.18 3.85
346 347 1.287503 GGCCGAGATCGCTTAGAGG 59.712 63.158 0.00 0.00 38.18 3.69
347 348 1.287503 GGGCCGAGATCGCTTAGAG 59.712 63.158 0.00 0.00 38.18 2.43
348 349 2.201022 GGGGCCGAGATCGCTTAGA 61.201 63.158 0.00 0.00 38.18 2.10
349 350 2.340443 GGGGCCGAGATCGCTTAG 59.660 66.667 0.00 0.00 38.18 2.18
350 351 3.602677 CGGGGCCGAGATCGCTTA 61.603 66.667 0.00 0.00 42.83 3.09
361 362 4.832608 GTCATGGTCGTCGGGGCC 62.833 72.222 0.00 0.00 0.00 5.80
362 363 3.385749 ATGTCATGGTCGTCGGGGC 62.386 63.158 0.00 0.00 0.00 5.80
363 364 1.227263 GATGTCATGGTCGTCGGGG 60.227 63.158 0.00 0.00 0.00 5.73
364 365 0.175760 AAGATGTCATGGTCGTCGGG 59.824 55.000 0.00 0.00 0.00 5.14
365 366 1.135112 TCAAGATGTCATGGTCGTCGG 60.135 52.381 0.00 0.00 0.00 4.79
366 367 2.278026 TCAAGATGTCATGGTCGTCG 57.722 50.000 0.00 0.00 0.00 5.12
367 368 2.345641 CGTTCAAGATGTCATGGTCGTC 59.654 50.000 0.00 0.00 0.00 4.20
368 369 2.029380 TCGTTCAAGATGTCATGGTCGT 60.029 45.455 0.00 0.00 0.00 4.34
369 370 2.606108 TCGTTCAAGATGTCATGGTCG 58.394 47.619 0.00 0.00 0.00 4.79
370 371 4.259970 CGATTCGTTCAAGATGTCATGGTC 60.260 45.833 0.00 0.00 0.00 4.02
371 372 3.618594 CGATTCGTTCAAGATGTCATGGT 59.381 43.478 0.00 0.00 0.00 3.55
372 373 3.865164 TCGATTCGTTCAAGATGTCATGG 59.135 43.478 5.89 0.00 0.00 3.66
373 374 5.232838 TGATCGATTCGTTCAAGATGTCATG 59.767 40.000 15.48 0.00 33.56 3.07
374 375 5.351458 TGATCGATTCGTTCAAGATGTCAT 58.649 37.500 15.48 0.00 33.56 3.06
375 376 4.743493 TGATCGATTCGTTCAAGATGTCA 58.257 39.130 15.48 2.15 33.56 3.58
376 377 5.062183 TGTTGATCGATTCGTTCAAGATGTC 59.938 40.000 25.13 16.55 43.13 3.06
377 378 4.929211 TGTTGATCGATTCGTTCAAGATGT 59.071 37.500 25.13 0.00 43.13 3.06
378 379 5.454736 TGTTGATCGATTCGTTCAAGATG 57.545 39.130 25.13 0.00 43.13 2.90
379 380 5.163854 GGTTGTTGATCGATTCGTTCAAGAT 60.164 40.000 25.13 4.42 43.13 2.40
380 381 4.151689 GGTTGTTGATCGATTCGTTCAAGA 59.848 41.667 25.13 22.37 43.13 3.02
381 382 4.394795 GGTTGTTGATCGATTCGTTCAAG 58.605 43.478 25.13 0.00 43.13 3.02
382 383 3.187637 GGGTTGTTGATCGATTCGTTCAA 59.812 43.478 22.26 22.26 41.26 2.69
383 384 2.739913 GGGTTGTTGATCGATTCGTTCA 59.260 45.455 14.19 14.19 34.46 3.18
384 385 2.095372 GGGGTTGTTGATCGATTCGTTC 59.905 50.000 5.89 8.01 0.00 3.95
385 386 2.081462 GGGGTTGTTGATCGATTCGTT 58.919 47.619 5.89 0.00 0.00 3.85
386 387 1.002659 TGGGGTTGTTGATCGATTCGT 59.997 47.619 5.89 0.00 0.00 3.85
387 388 1.732941 TGGGGTTGTTGATCGATTCG 58.267 50.000 0.00 0.00 0.00 3.34
388 389 3.694072 TGATTGGGGTTGTTGATCGATTC 59.306 43.478 0.00 0.00 0.00 2.52
389 390 3.443681 GTGATTGGGGTTGTTGATCGATT 59.556 43.478 0.00 0.00 0.00 3.34
390 391 3.016736 GTGATTGGGGTTGTTGATCGAT 58.983 45.455 0.00 0.00 0.00 3.59
391 392 2.224646 TGTGATTGGGGTTGTTGATCGA 60.225 45.455 0.00 0.00 0.00 3.59
392 393 2.095263 GTGTGATTGGGGTTGTTGATCG 60.095 50.000 0.00 0.00 0.00 3.69
393 394 3.157087 AGTGTGATTGGGGTTGTTGATC 58.843 45.455 0.00 0.00 0.00 2.92
394 395 3.243359 AGTGTGATTGGGGTTGTTGAT 57.757 42.857 0.00 0.00 0.00 2.57
395 396 2.746279 AGTGTGATTGGGGTTGTTGA 57.254 45.000 0.00 0.00 0.00 3.18
396 397 6.582677 TTTATAGTGTGATTGGGGTTGTTG 57.417 37.500 0.00 0.00 0.00 3.33
397 398 6.014925 GGTTTTATAGTGTGATTGGGGTTGTT 60.015 38.462 0.00 0.00 0.00 2.83
398 399 5.479027 GGTTTTATAGTGTGATTGGGGTTGT 59.521 40.000 0.00 0.00 0.00 3.32
399 400 5.714806 AGGTTTTATAGTGTGATTGGGGTTG 59.285 40.000 0.00 0.00 0.00 3.77
400 401 5.714806 CAGGTTTTATAGTGTGATTGGGGTT 59.285 40.000 0.00 0.00 0.00 4.11
401 402 5.261216 CAGGTTTTATAGTGTGATTGGGGT 58.739 41.667 0.00 0.00 0.00 4.95
402 403 4.644685 CCAGGTTTTATAGTGTGATTGGGG 59.355 45.833 0.00 0.00 0.00 4.96
403 404 4.097892 GCCAGGTTTTATAGTGTGATTGGG 59.902 45.833 0.00 0.00 0.00 4.12
404 405 4.097892 GGCCAGGTTTTATAGTGTGATTGG 59.902 45.833 0.00 0.00 0.00 3.16
405 406 4.704540 TGGCCAGGTTTTATAGTGTGATTG 59.295 41.667 0.00 0.00 0.00 2.67
406 407 4.929479 TGGCCAGGTTTTATAGTGTGATT 58.071 39.130 0.00 0.00 0.00 2.57
407 408 4.584638 TGGCCAGGTTTTATAGTGTGAT 57.415 40.909 0.00 0.00 0.00 3.06
408 409 4.584638 ATGGCCAGGTTTTATAGTGTGA 57.415 40.909 13.05 0.00 0.00 3.58
409 410 4.704540 TCAATGGCCAGGTTTTATAGTGTG 59.295 41.667 13.05 0.00 0.00 3.82
410 411 4.929479 TCAATGGCCAGGTTTTATAGTGT 58.071 39.130 13.05 0.00 0.00 3.55
411 412 5.418840 ACTTCAATGGCCAGGTTTTATAGTG 59.581 40.000 13.05 0.00 0.00 2.74
412 413 5.580022 ACTTCAATGGCCAGGTTTTATAGT 58.420 37.500 13.05 4.53 0.00 2.12
413 414 6.332630 CAACTTCAATGGCCAGGTTTTATAG 58.667 40.000 13.05 3.90 0.00 1.31
414 415 5.186797 CCAACTTCAATGGCCAGGTTTTATA 59.813 40.000 13.05 0.00 0.00 0.98
415 416 4.020307 CCAACTTCAATGGCCAGGTTTTAT 60.020 41.667 13.05 0.00 0.00 1.40
416 417 3.323403 CCAACTTCAATGGCCAGGTTTTA 59.677 43.478 13.05 0.00 0.00 1.52
417 418 2.104622 CCAACTTCAATGGCCAGGTTTT 59.895 45.455 13.05 0.00 0.00 2.43
418 419 1.693606 CCAACTTCAATGGCCAGGTTT 59.306 47.619 13.05 0.00 0.00 3.27
419 420 1.341080 CCAACTTCAATGGCCAGGTT 58.659 50.000 13.05 8.20 0.00 3.50
420 421 0.542702 CCCAACTTCAATGGCCAGGT 60.543 55.000 13.05 0.00 36.58 4.00
421 422 1.259840 CCCCAACTTCAATGGCCAGG 61.260 60.000 13.05 6.17 36.58 4.45
422 423 0.542702 ACCCCAACTTCAATGGCCAG 60.543 55.000 13.05 0.00 36.58 4.85
423 424 0.105246 AACCCCAACTTCAATGGCCA 60.105 50.000 8.56 8.56 36.58 5.36
424 425 0.321346 CAACCCCAACTTCAATGGCC 59.679 55.000 0.00 0.00 36.58 5.36
425 426 1.047801 ACAACCCCAACTTCAATGGC 58.952 50.000 0.00 0.00 36.58 4.40
426 427 3.226777 TGTACAACCCCAACTTCAATGG 58.773 45.455 0.00 0.00 37.71 3.16
427 428 4.141287 TCTGTACAACCCCAACTTCAATG 58.859 43.478 0.00 0.00 0.00 2.82
428 429 4.447138 TCTGTACAACCCCAACTTCAAT 57.553 40.909 0.00 0.00 0.00 2.57
429 430 3.935818 TCTGTACAACCCCAACTTCAA 57.064 42.857 0.00 0.00 0.00 2.69
441 442 5.163184 TGTTCACAACCCCTAATCTGTACAA 60.163 40.000 0.00 0.00 0.00 2.41
446 447 4.380867 GCATTGTTCACAACCCCTAATCTG 60.381 45.833 0.00 0.00 38.86 2.90
482 483 2.420890 CCCTCATCCAGCTCGAGC 59.579 66.667 30.01 30.01 42.49 5.03
483 484 1.756408 ATGCCCTCATCCAGCTCGAG 61.756 60.000 8.45 8.45 0.00 4.04
484 485 1.763655 ATGCCCTCATCCAGCTCGA 60.764 57.895 0.00 0.00 0.00 4.04
485 486 1.597302 CATGCCCTCATCCAGCTCG 60.597 63.158 0.00 0.00 0.00 5.03
487 488 1.226542 CACATGCCCTCATCCAGCT 59.773 57.895 0.00 0.00 0.00 4.24
488 489 2.487532 GCACATGCCCTCATCCAGC 61.488 63.158 0.00 0.00 34.31 4.85
489 490 0.818445 GAGCACATGCCCTCATCCAG 60.818 60.000 0.00 0.00 43.38 3.86
490 491 1.225426 GAGCACATGCCCTCATCCA 59.775 57.895 0.00 0.00 43.38 3.41
493 494 1.913951 TTCCGAGCACATGCCCTCAT 61.914 55.000 12.15 0.00 43.38 2.90
494 495 2.123248 TTTCCGAGCACATGCCCTCA 62.123 55.000 12.15 0.00 43.38 3.86
495 496 1.372087 CTTTCCGAGCACATGCCCTC 61.372 60.000 0.00 0.00 43.38 4.30
496 497 1.377725 CTTTCCGAGCACATGCCCT 60.378 57.895 0.00 0.00 43.38 5.19
497 498 2.409870 CCTTTCCGAGCACATGCCC 61.410 63.158 0.00 0.00 43.38 5.36
498 499 3.056313 GCCTTTCCGAGCACATGCC 62.056 63.158 0.00 0.00 43.38 4.40
499 500 2.486966 GCCTTTCCGAGCACATGC 59.513 61.111 0.00 0.00 42.49 4.06
500 501 1.377725 AGGCCTTTCCGAGCACATG 60.378 57.895 0.00 0.00 40.77 3.21
501 502 1.377725 CAGGCCTTTCCGAGCACAT 60.378 57.895 0.00 0.00 40.77 3.21
502 503 1.841302 ATCAGGCCTTTCCGAGCACA 61.841 55.000 0.00 0.00 40.77 4.57
521 522 1.227823 CAACGCCAAGGACCAGTGA 60.228 57.895 0.00 0.00 0.00 3.41
528 529 1.371183 CAGGAGACAACGCCAAGGA 59.629 57.895 0.00 0.00 38.45 3.36
530 531 1.672356 CCCAGGAGACAACGCCAAG 60.672 63.158 0.00 0.00 38.45 3.61
542 543 0.401738 CAAGAAGCAAGGTCCCAGGA 59.598 55.000 0.00 0.00 0.00 3.86
548 549 1.979155 GGGCCCAAGAAGCAAGGTC 60.979 63.158 19.95 0.00 0.00 3.85
557 558 2.770130 GAACCATGGGGCCCAAGA 59.230 61.111 32.57 6.40 36.95 3.02
573 574 3.181442 TGTTAAAATGGGTCGGACTTGGA 60.181 43.478 8.23 0.00 0.00 3.53
586 587 3.065371 GTCCCCTCGAGCATGTTAAAATG 59.935 47.826 6.99 0.81 0.00 2.32
590 591 0.539986 GGTCCCCTCGAGCATGTTAA 59.460 55.000 6.99 0.00 38.92 2.01
591 592 1.335132 GGGTCCCCTCGAGCATGTTA 61.335 60.000 6.99 0.00 40.99 2.41
621 622 1.270785 ACACACATCGGATGTCAGCAA 60.271 47.619 20.27 0.00 42.70 3.91
634 635 2.076100 CATGGCTAACACGACACACAT 58.924 47.619 0.00 0.00 0.00 3.21
660 661 1.640593 TTTGTCCCCACTCTGGTGCA 61.641 55.000 0.00 0.00 41.75 4.57
661 662 0.467290 TTTTGTCCCCACTCTGGTGC 60.467 55.000 0.00 0.00 41.75 5.01
678 679 6.458888 CGCCCAAAATAAAAATGTTGTGGTTT 60.459 34.615 0.00 0.00 0.00 3.27
687 688 4.665394 GCAACGTCGCCCAAAATAAAAATG 60.665 41.667 0.00 0.00 0.00 2.32
688 689 3.430556 GCAACGTCGCCCAAAATAAAAAT 59.569 39.130 0.00 0.00 0.00 1.82
689 690 2.795470 GCAACGTCGCCCAAAATAAAAA 59.205 40.909 0.00 0.00 0.00 1.94
690 691 2.034812 AGCAACGTCGCCCAAAATAAAA 59.965 40.909 0.00 0.00 0.00 1.52
691 692 1.609555 AGCAACGTCGCCCAAAATAAA 59.390 42.857 0.00 0.00 0.00 1.40
692 693 1.198178 GAGCAACGTCGCCCAAAATAA 59.802 47.619 0.00 0.00 0.00 1.40
693 694 0.800012 GAGCAACGTCGCCCAAAATA 59.200 50.000 0.00 0.00 0.00 1.40
694 695 1.579429 GAGCAACGTCGCCCAAAAT 59.421 52.632 0.00 0.00 0.00 1.82
695 696 2.548295 GGAGCAACGTCGCCCAAAA 61.548 57.895 0.00 0.00 0.00 2.44
696 697 2.975799 GGAGCAACGTCGCCCAAA 60.976 61.111 0.00 0.00 0.00 3.28
697 698 4.243008 TGGAGCAACGTCGCCCAA 62.243 61.111 6.26 0.00 31.76 4.12
720 721 0.728466 GTAGCGGTGAGTGACGTGTC 60.728 60.000 0.00 0.00 0.00 3.67
726 727 2.385013 TACGTAGTAGCGGTGAGTGA 57.615 50.000 0.00 0.00 45.11 3.41
737 738 4.645762 TGTTGGTTGTGTGTACGTAGTA 57.354 40.909 0.00 0.00 45.11 1.82
739 740 6.715344 AATATGTTGGTTGTGTGTACGTAG 57.285 37.500 0.00 0.00 0.00 3.51
772 773 5.155278 TCCACCTTCGAGCATAGTAAAAA 57.845 39.130 0.00 0.00 0.00 1.94
773 774 4.811969 TCCACCTTCGAGCATAGTAAAA 57.188 40.909 0.00 0.00 0.00 1.52
774 775 4.649674 AGATCCACCTTCGAGCATAGTAAA 59.350 41.667 0.00 0.00 0.00 2.01
803 804 9.806203 CAAAAATAGATCCACATGATGCTAAAA 57.194 29.630 0.00 0.00 32.41 1.52
804 805 9.187996 TCAAAAATAGATCCACATGATGCTAAA 57.812 29.630 0.00 0.00 32.41 1.85
805 806 8.750515 TCAAAAATAGATCCACATGATGCTAA 57.249 30.769 0.00 0.00 32.41 3.09
806 807 8.750515 TTCAAAAATAGATCCACATGATGCTA 57.249 30.769 0.00 0.00 32.41 3.49
807 808 7.649533 TTCAAAAATAGATCCACATGATGCT 57.350 32.000 0.00 0.00 32.41 3.79
808 809 8.192774 TCTTTCAAAAATAGATCCACATGATGC 58.807 33.333 0.00 0.00 32.41 3.91
858 859 0.887387 GTGTTAGCTGGGCCGACAAA 60.887 55.000 0.00 0.00 0.00 2.83
859 860 1.302192 GTGTTAGCTGGGCCGACAA 60.302 57.895 0.00 0.00 0.00 3.18
861 862 1.741770 CTGTGTTAGCTGGGCCGAC 60.742 63.158 0.00 0.00 0.00 4.79
871 918 1.271325 TGTGATGGTGGGCTGTGTTAG 60.271 52.381 0.00 0.00 0.00 2.34
876 923 0.112995 ATTGTGTGATGGTGGGCTGT 59.887 50.000 0.00 0.00 0.00 4.40
880 927 0.810648 CGGAATTGTGTGATGGTGGG 59.189 55.000 0.00 0.00 0.00 4.61
890 937 1.890876 TTGGAGTGACCGGAATTGTG 58.109 50.000 9.46 0.00 42.61 3.33
916 963 5.418676 CAAAGTCAAGTGTGGGATGTTTTT 58.581 37.500 0.00 0.00 0.00 1.94
917 964 4.680440 GCAAAGTCAAGTGTGGGATGTTTT 60.680 41.667 0.00 0.00 0.00 2.43
918 965 3.181476 GCAAAGTCAAGTGTGGGATGTTT 60.181 43.478 0.00 0.00 0.00 2.83
919 966 2.362077 GCAAAGTCAAGTGTGGGATGTT 59.638 45.455 0.00 0.00 0.00 2.71
920 967 1.956477 GCAAAGTCAAGTGTGGGATGT 59.044 47.619 0.00 0.00 0.00 3.06
921 968 1.270550 GGCAAAGTCAAGTGTGGGATG 59.729 52.381 0.00 0.00 0.00 3.51
922 969 1.620822 GGCAAAGTCAAGTGTGGGAT 58.379 50.000 0.00 0.00 0.00 3.85
923 970 0.817634 CGGCAAAGTCAAGTGTGGGA 60.818 55.000 0.00 0.00 0.00 4.37
924 971 1.101049 ACGGCAAAGTCAAGTGTGGG 61.101 55.000 0.00 0.00 0.00 4.61
925 972 0.738389 AACGGCAAAGTCAAGTGTGG 59.262 50.000 0.00 0.00 0.00 4.17
926 973 2.450160 GAAACGGCAAAGTCAAGTGTG 58.550 47.619 0.00 0.00 0.00 3.82
927 974 1.404035 GGAAACGGCAAAGTCAAGTGT 59.596 47.619 0.00 0.00 0.00 3.55
928 975 1.269051 GGGAAACGGCAAAGTCAAGTG 60.269 52.381 0.00 0.00 0.00 3.16
929 976 1.029681 GGGAAACGGCAAAGTCAAGT 58.970 50.000 0.00 0.00 0.00 3.16
930 977 1.266989 GAGGGAAACGGCAAAGTCAAG 59.733 52.381 0.00 0.00 0.00 3.02
931 978 1.314730 GAGGGAAACGGCAAAGTCAA 58.685 50.000 0.00 0.00 0.00 3.18
932 979 0.181587 TGAGGGAAACGGCAAAGTCA 59.818 50.000 0.00 0.00 0.00 3.41
933 980 1.314730 TTGAGGGAAACGGCAAAGTC 58.685 50.000 0.00 0.00 0.00 3.01
934 981 1.770294 TTTGAGGGAAACGGCAAAGT 58.230 45.000 0.00 0.00 32.56 2.66
935 982 2.880963 TTTTGAGGGAAACGGCAAAG 57.119 45.000 0.00 0.00 36.08 2.77
960 1007 3.517602 GGAACGGCAAAGTCAAGTTTTT 58.482 40.909 0.00 0.00 0.00 1.94
961 1008 2.159156 GGGAACGGCAAAGTCAAGTTTT 60.159 45.455 0.00 0.00 0.00 2.43
962 1009 1.407618 GGGAACGGCAAAGTCAAGTTT 59.592 47.619 0.00 0.00 0.00 2.66
963 1010 1.029681 GGGAACGGCAAAGTCAAGTT 58.970 50.000 0.00 0.00 0.00 2.66
984 1031 2.044946 ATGGCTGCGGGAGGTTTC 60.045 61.111 0.00 0.00 0.00 2.78
985 1032 2.361610 CATGGCTGCGGGAGGTTT 60.362 61.111 0.00 0.00 0.00 3.27
1039 1086 4.717313 GTGGGGGTTGCCGGAGAC 62.717 72.222 5.05 1.49 0.00 3.36
1113 1423 1.239296 CGGGGGATACTGCGTCGATA 61.239 60.000 0.00 0.00 0.00 2.92
1124 1434 1.906824 GAGACGGATGCGGGGGATA 60.907 63.158 12.44 0.00 0.00 2.59
1539 1849 1.527457 CCTCTTCAAGGGGGATGGAT 58.473 55.000 0.00 0.00 42.03 3.41
1550 1860 2.342279 CGACCGTGGCCTCTTCAA 59.658 61.111 3.32 0.00 0.00 2.69
1765 2075 0.466543 AGCGTGTTGTAGGTGGACAA 59.533 50.000 0.00 0.00 36.98 3.18
1809 2119 1.079127 CACGGCGGACTCCATCTTT 60.079 57.895 13.24 0.00 0.00 2.52
1935 2245 2.100584 GCCCGGCATTTCATCAAACATA 59.899 45.455 3.91 0.00 0.00 2.29
1936 2246 1.134729 GCCCGGCATTTCATCAAACAT 60.135 47.619 3.91 0.00 0.00 2.71
1970 2280 8.262933 TCATGACATTGTATGAGATTGAGTTCT 58.737 33.333 0.00 0.00 0.00 3.01
2150 2460 2.251818 GCTCTGCCATATCCTCCACTA 58.748 52.381 0.00 0.00 0.00 2.74
2235 2545 1.291637 TCCAATGCCCCATCCAAATCT 59.708 47.619 0.00 0.00 0.00 2.40
2293 2603 2.893398 GTACTGCCTCGGGTCCAG 59.107 66.667 0.00 0.00 0.00 3.86
2317 2627 1.085091 GCACACAAGCTCTCCATCAG 58.915 55.000 0.00 0.00 0.00 2.90
2428 2738 3.824443 TCGATCACTGGATTATAAGCCGA 59.176 43.478 14.79 6.77 37.25 5.54
2466 2776 2.420022 CTCAGCCTTGTTGGTATTTCCG 59.580 50.000 0.00 0.00 39.52 4.30
2598 2908 1.817941 ACGGCGTGTCATAATGGCC 60.818 57.895 13.76 0.00 40.36 5.36
2777 3087 4.760047 CGGTCTGAACCCGGCCAG 62.760 72.222 2.24 2.88 43.21 4.85
2841 3151 5.830799 AGATCTTATGTGCCACATCCATA 57.169 39.130 14.74 0.00 39.88 2.74
2848 3158 3.065925 GCTTCCAAGATCTTATGTGCCAC 59.934 47.826 7.86 0.00 0.00 5.01
2952 3262 2.609002 GCAAAGGGAAACAAGCAACTTG 59.391 45.455 5.80 5.80 45.85 3.16
2985 3295 1.133976 AGCTTATGTGCCTCCATCACC 60.134 52.381 0.00 0.00 33.71 4.02
3018 3328 0.249398 CTTCGAAGTCCCGGTCCAAT 59.751 55.000 17.24 0.00 0.00 3.16
3231 3541 5.705397 TGGATGTTGAAGATCCATTCTCT 57.295 39.130 18.91 0.00 43.71 3.10
3243 3553 0.776810 TGCCCCTCTTGGATGTTGAA 59.223 50.000 0.00 0.00 35.39 2.69
3267 3577 1.522355 CTACGCACCCATGGCAGAG 60.522 63.158 6.09 4.99 0.00 3.35
3295 3605 5.198965 CAAACAGGATCTCCCATGAATTCT 58.801 41.667 7.05 0.00 37.41 2.40
3477 3796 8.798153 GCCTCAATTATTAAACATGTTTCTTCG 58.202 33.333 26.46 10.50 34.23 3.79
3549 3870 8.398665 GCCACTTATAAAGAATGAAGTAACAGG 58.601 37.037 0.00 0.00 31.05 4.00
3787 4120 6.593770 TGCTGATTACCTGTACACTGTATTTG 59.406 38.462 0.00 0.00 0.00 2.32
3926 4259 2.600470 TCCTTTGGCTGCACTTTTTG 57.400 45.000 0.50 0.00 0.00 2.44
3931 4266 3.134442 TCAAATTTTCCTTTGGCTGCACT 59.866 39.130 0.50 0.00 36.87 4.40
3935 4270 6.864360 TCAATTCAAATTTTCCTTTGGCTG 57.136 33.333 0.00 0.00 36.87 4.85
3997 4365 3.029320 TGCCTTTTATGCACTGCAAAG 57.971 42.857 8.03 7.33 43.62 2.77
4000 4369 2.364970 ACTTTGCCTTTTATGCACTGCA 59.635 40.909 6.09 6.09 44.86 4.41
4002 4371 5.772521 AGTTACTTTGCCTTTTATGCACTG 58.227 37.500 0.00 0.00 38.72 3.66
4071 4501 8.867112 TTTACATAGACTAACATTAAGAGGCG 57.133 34.615 0.00 0.00 0.00 5.52
4120 4552 8.103660 AGGAATATGGCTTCTGATGATATCAT 57.896 34.615 18.21 18.21 38.85 2.45
4237 4672 7.228590 TGCTTTTGTAACCTTCACTACCTTAT 58.771 34.615 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.