Multiple sequence alignment - TraesCS4A01G258000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G258000 chr4A 100.000 5114 0 0 1 5114 570979939 570974826 0.000000e+00 9444.0
1 TraesCS4A01G258000 chr4A 100.000 2433 0 0 5421 7853 570974519 570972087 0.000000e+00 4494.0
2 TraesCS4A01G258000 chr4A 88.139 548 51 9 3537 4075 570975581 570975039 2.390000e-179 640.0
3 TraesCS4A01G258000 chr4A 88.139 548 51 9 4359 4901 570976403 570975865 2.390000e-179 640.0
4 TraesCS4A01G258000 chr4A 93.711 159 10 0 2045 2203 475420678 475420520 1.020000e-58 239.0
5 TraesCS4A01G258000 chr4A 87.324 71 6 3 1223 1292 570978843 570978775 2.350000e-10 78.7
6 TraesCS4A01G258000 chr4D 92.680 2746 99 47 1 2655 32015054 32017788 0.000000e+00 3864.0
7 TraesCS4A01G258000 chr4D 94.943 1582 68 7 2799 4375 32018056 32019630 0.000000e+00 2468.0
8 TraesCS4A01G258000 chr4D 94.984 1256 39 11 6423 7670 32021594 32022833 0.000000e+00 1949.0
9 TraesCS4A01G258000 chr4D 91.527 956 58 14 4172 5114 32019612 32020557 0.000000e+00 1295.0
10 TraesCS4A01G258000 chr4D 87.591 548 53 10 4359 4901 32018796 32019333 8.650000e-174 621.0
11 TraesCS4A01G258000 chr4D 85.634 536 60 12 3534 4059 32019792 32020320 1.490000e-151 547.0
12 TraesCS4A01G258000 chr4D 88.791 339 18 9 5537 5859 32020924 32021258 1.590000e-106 398.0
13 TraesCS4A01G258000 chr4D 88.115 244 12 7 6099 6341 32021368 32021595 2.790000e-69 274.0
14 TraesCS4A01G258000 chr4D 94.937 158 8 0 2045 2202 482703471 482703628 1.690000e-61 248.0
15 TraesCS4A01G258000 chr4D 93.789 161 8 2 7694 7853 32022823 32022982 2.830000e-59 241.0
16 TraesCS4A01G258000 chr4D 88.535 157 18 0 4199 4355 292909560 292909404 2.890000e-44 191.0
17 TraesCS4A01G258000 chr4D 92.233 103 7 1 2700 2802 41339498 41339599 2.280000e-30 145.0
18 TraesCS4A01G258000 chr4D 92.233 103 7 1 2700 2802 272009933 272010034 2.280000e-30 145.0
19 TraesCS4A01G258000 chr4D 80.741 135 23 3 4209 4340 425696316 425696450 1.390000e-17 102.0
20 TraesCS4A01G258000 chr4D 87.324 71 6 3 1223 1292 32016204 32016272 2.350000e-10 78.7
21 TraesCS4A01G258000 chr4D 95.455 44 2 0 6381 6424 499285778 499285735 3.930000e-08 71.3
22 TraesCS4A01G258000 chr4B 90.874 2356 118 50 2799 5094 46193826 46196144 0.000000e+00 3070.0
23 TraesCS4A01G258000 chr4B 93.863 994 30 6 816 1780 46191491 46192482 0.000000e+00 1469.0
24 TraesCS4A01G258000 chr4B 94.452 739 25 11 6423 7149 46197594 46198328 0.000000e+00 1123.0
25 TraesCS4A01G258000 chr4B 87.512 1025 58 24 1697 2680 46192481 46193476 0.000000e+00 1120.0
26 TraesCS4A01G258000 chr4B 87.572 692 37 17 5537 6207 46196497 46197160 0.000000e+00 756.0
27 TraesCS4A01G258000 chr4B 84.398 814 78 25 1 789 46190618 46191407 0.000000e+00 754.0
28 TraesCS4A01G258000 chr4B 86.847 555 51 13 4361 4901 46194578 46195124 1.130000e-167 601.0
29 TraesCS4A01G258000 chr4B 85.502 538 49 18 3537 4059 46195402 46195925 1.160000e-147 534.0
30 TraesCS4A01G258000 chr4B 84.906 424 35 13 7236 7638 46198339 46198754 1.230000e-107 401.0
31 TraesCS4A01G258000 chr4B 90.446 157 15 0 4199 4355 277316674 277316518 2.870000e-49 207.0
32 TraesCS4A01G258000 chr4B 88.571 140 4 3 6203 6341 46197467 46197595 8.160000e-35 159.0
33 TraesCS4A01G258000 chr4B 88.372 86 9 1 6339 6424 612214248 612214164 1.390000e-17 102.0
34 TraesCS4A01G258000 chr4B 94.231 52 3 0 765 816 46191415 46191466 6.530000e-11 80.5
35 TraesCS4A01G258000 chr4B 85.915 71 7 3 1223 1292 46191791 46191859 1.090000e-08 73.1
36 TraesCS4A01G258000 chr5B 95.484 155 7 0 2045 2199 574956599 574956445 1.690000e-61 248.0
37 TraesCS4A01G258000 chr5B 90.173 173 16 1 4189 4360 479726830 479727002 2.850000e-54 224.0
38 TraesCS4A01G258000 chr5B 97.297 37 1 0 3210 3246 597866184 597866148 6.580000e-06 63.9
39 TraesCS4A01G258000 chr5B 100.000 29 0 0 5507 5535 569244283 569244255 4.000000e-03 54.7
40 TraesCS4A01G258000 chr2B 94.872 156 8 0 2045 2200 248148071 248148226 2.190000e-60 244.0
41 TraesCS4A01G258000 chr2B 94.268 157 9 0 2045 2201 660461576 660461420 2.830000e-59 241.0
42 TraesCS4A01G258000 chr2B 91.813 171 14 0 2045 2215 140765957 140766127 1.020000e-58 239.0
43 TraesCS4A01G258000 chr2B 95.699 93 4 0 2711 2803 136179731 136179823 4.910000e-32 150.0
44 TraesCS4A01G258000 chr2B 90.217 92 9 0 6340 6431 247368622 247368531 3.850000e-23 121.0
45 TraesCS4A01G258000 chr7B 91.228 171 12 2 2032 2202 91127024 91127191 6.130000e-56 230.0
46 TraesCS4A01G258000 chr7B 90.805 87 8 0 6339 6425 509568578 509568664 4.980000e-22 117.0
47 TraesCS4A01G258000 chr7B 85.507 69 8 2 412 479 3924015 3923948 3.930000e-08 71.3
48 TraesCS4A01G258000 chr7B 77.622 143 14 10 3128 3252 683516270 683516412 3.930000e-08 71.3
49 TraesCS4A01G258000 chr7B 96.875 32 1 0 2653 2684 511462092 511462123 4.000000e-03 54.7
50 TraesCS4A01G258000 chr5D 90.173 173 16 1 4189 4360 399614517 399614689 2.850000e-54 224.0
51 TraesCS4A01G258000 chr5D 91.667 108 6 3 2709 2815 525478266 525478161 6.350000e-31 147.0
52 TraesCS4A01G258000 chr5D 92.233 103 7 1 2700 2802 237195265 237195366 2.280000e-30 145.0
53 TraesCS4A01G258000 chr5D 90.654 107 9 1 2699 2805 202975959 202975854 2.950000e-29 141.0
54 TraesCS4A01G258000 chr5D 88.764 89 9 1 6340 6428 421531325 421531412 3.000000e-19 108.0
55 TraesCS4A01G258000 chr5D 89.286 84 6 2 6343 6426 546857356 546857276 1.390000e-17 102.0
56 TraesCS4A01G258000 chr5D 88.235 85 5 3 6335 6417 546857271 546857352 6.490000e-16 97.1
57 TraesCS4A01G258000 chr5D 87.342 79 9 1 6340 6418 48045498 48045421 1.090000e-13 89.8
58 TraesCS4A01G258000 chr5D 83.721 86 14 0 6340 6425 238778121 238778036 1.820000e-11 82.4
59 TraesCS4A01G258000 chr5D 78.947 133 16 8 3131 3252 512301002 512300871 6.530000e-11 80.5
60 TraesCS4A01G258000 chr2D 88.608 158 17 1 4201 4357 337850201 337850044 2.890000e-44 191.0
61 TraesCS4A01G258000 chr2D 87.179 78 10 0 6340 6417 572703552 572703475 1.090000e-13 89.8
62 TraesCS4A01G258000 chr2D 96.875 32 1 0 2653 2684 607675740 607675771 4.000000e-03 54.7
63 TraesCS4A01G258000 chr1A 88.608 158 17 1 4199 4355 520812347 520812190 2.890000e-44 191.0
64 TraesCS4A01G258000 chr1A 88.764 89 6 2 6340 6425 331272195 331272282 1.080000e-18 106.0
65 TraesCS4A01G258000 chr1A 83.908 87 14 0 6340 6426 543475017 543475103 5.050000e-12 84.2
66 TraesCS4A01G258000 chr1A 100.000 32 0 0 2654 2685 292769550 292769519 8.510000e-05 60.2
67 TraesCS4A01G258000 chr1A 96.970 33 1 0 5503 5535 527022899 527022867 1.000000e-03 56.5
68 TraesCS4A01G258000 chr6D 88.199 161 14 3 4193 4353 346453896 346454051 3.740000e-43 187.0
69 TraesCS4A01G258000 chr6D 84.706 85 13 0 6340 6424 343295721 343295805 1.400000e-12 86.1
70 TraesCS4A01G258000 chr6D 82.022 89 15 1 6340 6428 389976960 389976873 3.040000e-09 75.0
71 TraesCS4A01G258000 chr6D 100.000 31 0 0 2654 2684 420745857 420745827 3.060000e-04 58.4
72 TraesCS4A01G258000 chr6D 96.875 32 1 0 2653 2684 69908861 69908830 4.000000e-03 54.7
73 TraesCS4A01G258000 chr6D 100.000 29 0 0 5507 5535 346250271 346250243 4.000000e-03 54.7
74 TraesCS4A01G258000 chr6A 89.032 155 12 3 4199 4353 497478098 497477949 3.740000e-43 187.0
75 TraesCS4A01G258000 chr6A 100.000 29 0 0 5507 5535 51945212 51945184 4.000000e-03 54.7
76 TraesCS4A01G258000 chr1D 91.228 114 9 1 4243 4355 483953762 483953875 3.790000e-33 154.0
77 TraesCS4A01G258000 chr1D 91.262 103 8 1 2700 2802 199114196 199114297 1.060000e-28 139.0
78 TraesCS4A01G258000 chr1D 91.011 89 8 0 6336 6424 257002241 257002329 3.850000e-23 121.0
79 TraesCS4A01G258000 chr1D 86.076 79 10 1 6346 6424 402831668 402831591 5.050000e-12 84.2
80 TraesCS4A01G258000 chr1D 96.875 32 1 0 5504 5535 223348478 223348509 4.000000e-03 54.7
81 TraesCS4A01G258000 chr7D 92.233 103 7 1 2700 2802 570377865 570377966 2.280000e-30 145.0
82 TraesCS4A01G258000 chr7D 84.524 84 12 1 6349 6432 606640072 606639990 1.820000e-11 82.4
83 TraesCS4A01G258000 chr7D 78.723 141 12 8 3130 3252 602904867 602905007 2.350000e-10 78.7
84 TraesCS4A01G258000 chr7D 93.617 47 2 1 3210 3256 311269457 311269412 1.410000e-07 69.4
85 TraesCS4A01G258000 chr3D 91.509 106 8 1 2700 2805 71921737 71921633 2.280000e-30 145.0
86 TraesCS4A01G258000 chr3D 91.358 81 6 1 4275 4354 152489344 152489264 8.330000e-20 110.0
87 TraesCS4A01G258000 chr3D 88.235 85 10 0 6340 6424 177043190 177043274 1.390000e-17 102.0
88 TraesCS4A01G258000 chr3A 90.123 81 8 0 6340 6420 209651521 209651441 1.080000e-18 106.0
89 TraesCS4A01G258000 chr3A 89.855 69 7 0 3128 3196 293586923 293586991 1.090000e-13 89.8
90 TraesCS4A01G258000 chr2A 89.286 84 9 0 6341 6424 28816559 28816476 1.080000e-18 106.0
91 TraesCS4A01G258000 chr2A 89.412 85 8 1 6340 6424 593655827 593655910 1.080000e-18 106.0
92 TraesCS4A01G258000 chr2A 100.000 30 0 0 2655 2684 560941549 560941578 1.000000e-03 56.5
93 TraesCS4A01G258000 chr1B 88.764 89 6 2 6340 6425 355408269 355408356 1.080000e-18 106.0
94 TraesCS4A01G258000 chr1B 88.506 87 9 1 6339 6424 85441622 85441708 3.880000e-18 104.0
95 TraesCS4A01G258000 chr1B 87.342 79 10 0 6339 6417 597156889 597156811 3.020000e-14 91.6
96 TraesCS4A01G258000 chr1B 100.000 29 0 0 5507 5535 255515717 255515689 4.000000e-03 54.7
97 TraesCS4A01G258000 chr1B 96.875 32 1 0 2653 2684 597194961 597194930 4.000000e-03 54.7
98 TraesCS4A01G258000 chrUn 87.778 90 9 2 6340 6429 27630231 27630144 3.880000e-18 104.0
99 TraesCS4A01G258000 chr6B 87.356 87 10 1 6340 6426 85383680 85383765 1.800000e-16 99.0
100 TraesCS4A01G258000 chr6B 97.143 35 0 1 2651 2684 674381502 674381468 3.060000e-04 58.4
101 TraesCS4A01G258000 chr7A 93.617 47 2 1 3210 3256 360613254 360613209 1.410000e-07 69.4
102 TraesCS4A01G258000 chr5A 97.297 37 1 0 3210 3246 606965807 606965771 6.580000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G258000 chr4A 570972087 570979939 7852 True 6969.00 9444 100.000000 1 7853 2 chr4A.!!$R2 7852
1 TraesCS4A01G258000 chr4A 570975039 570978843 3804 True 452.90 640 87.867333 1223 4901 3 chr4A.!!$R3 3678
2 TraesCS4A01G258000 chr4D 32015054 32022982 7928 False 1173.57 3864 90.537800 1 7853 10 chr4D.!!$F5 7852
3 TraesCS4A01G258000 chr4B 46190618 46198754 8136 False 845.05 3070 88.720250 1 7638 12 chr4B.!!$F1 7637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 530 0.389391 CCTAAGCCACACGGATCGAT 59.611 55.000 0.0 0.0 0.0 3.59 F
672 698 1.279271 AGGATCAAGGTCAGGGAAACG 59.721 52.381 0.0 0.0 0.0 3.60 F
931 1027 1.961277 CTCAACAGACCACCGCACC 60.961 63.158 0.0 0.0 0.0 5.01 F
5462 6277 2.771943 ACAGTTGGAAGGTCTTGAGTGA 59.228 45.455 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
5014 5828 1.130054 TTCTGCTGGAGTCAGGCCTT 61.130 55.000 0.0 0.0 41.19 4.35 R
5429 6244 3.916359 TCCAACTGTGGTCAAACACTA 57.084 42.857 0.0 0.0 46.11 2.74 R
5466 6281 0.532573 GCTCCCGACAATCTCACTCA 59.467 55.000 0.0 0.0 0.00 3.41 R
7744 8927 0.179056 AAATGGTCCGTGCCCTATCG 60.179 55.000 0.0 0.0 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.878211 TCATCATGTGCTAGGGTGGA 58.122 50.000 0.00 0.00 0.00 4.02
161 162 4.767478 ACGAATAGAAGGCCCTAGAAAAC 58.233 43.478 0.00 0.00 0.00 2.43
162 163 4.224370 ACGAATAGAAGGCCCTAGAAAACA 59.776 41.667 0.00 0.00 0.00 2.83
184 185 7.273320 ACATCTTCATGAATTGCCTAATCAG 57.727 36.000 8.96 0.00 33.72 2.90
328 332 5.625150 ACCTCTTTGACTGTCATAGCTTTT 58.375 37.500 19.42 5.07 0.00 2.27
329 333 6.064717 ACCTCTTTGACTGTCATAGCTTTTT 58.935 36.000 19.42 3.68 0.00 1.94
330 334 6.016777 ACCTCTTTGACTGTCATAGCTTTTTG 60.017 38.462 19.42 8.98 0.00 2.44
331 335 5.762045 TCTTTGACTGTCATAGCTTTTTGC 58.238 37.500 19.42 0.00 43.29 3.68
332 336 4.503741 TTGACTGTCATAGCTTTTTGCC 57.496 40.909 11.86 0.00 44.23 4.52
334 338 3.888323 TGACTGTCATAGCTTTTTGCCAA 59.112 39.130 6.36 0.00 44.23 4.52
335 339 4.340666 TGACTGTCATAGCTTTTTGCCAAA 59.659 37.500 6.36 0.00 44.23 3.28
337 341 5.473039 ACTGTCATAGCTTTTTGCCAAATC 58.527 37.500 0.00 0.00 44.23 2.17
338 342 4.819769 TGTCATAGCTTTTTGCCAAATCC 58.180 39.130 0.00 0.00 44.23 3.01
339 343 4.282957 TGTCATAGCTTTTTGCCAAATCCA 59.717 37.500 0.00 0.00 44.23 3.41
370 374 8.109634 AGTTCCAACATAGAGTTTATCCACATT 58.890 33.333 0.00 0.00 38.74 2.71
515 519 4.040047 TCTGATCAGATTTCCCTAAGCCA 58.960 43.478 21.67 0.00 31.41 4.75
516 520 4.133078 CTGATCAGATTTCCCTAAGCCAC 58.867 47.826 18.34 0.00 0.00 5.01
526 530 0.389391 CCTAAGCCACACGGATCGAT 59.611 55.000 0.00 0.00 0.00 3.59
570 596 1.358152 CACCCAAACCCTAGTCTCCA 58.642 55.000 0.00 0.00 0.00 3.86
579 605 4.551215 ACCCTAGTCTCCATTGATCTCT 57.449 45.455 0.00 0.00 0.00 3.10
672 698 1.279271 AGGATCAAGGTCAGGGAAACG 59.721 52.381 0.00 0.00 0.00 3.60
931 1027 1.961277 CTCAACAGACCACCGCACC 60.961 63.158 0.00 0.00 0.00 5.01
932 1028 3.345808 CAACAGACCACCGCACCG 61.346 66.667 0.00 0.00 0.00 4.94
5460 6275 3.199880 CACAGTTGGAAGGTCTTGAGT 57.800 47.619 0.00 0.00 0.00 3.41
5461 6276 2.874701 CACAGTTGGAAGGTCTTGAGTG 59.125 50.000 0.00 0.00 0.00 3.51
5462 6277 2.771943 ACAGTTGGAAGGTCTTGAGTGA 59.228 45.455 0.00 0.00 0.00 3.41
5463 6278 3.392616 ACAGTTGGAAGGTCTTGAGTGAT 59.607 43.478 0.00 0.00 0.00 3.06
5464 6279 3.999663 CAGTTGGAAGGTCTTGAGTGATC 59.000 47.826 0.00 0.00 0.00 2.92
5465 6280 3.906846 AGTTGGAAGGTCTTGAGTGATCT 59.093 43.478 0.00 0.00 0.00 2.75
5466 6281 4.349342 AGTTGGAAGGTCTTGAGTGATCTT 59.651 41.667 0.00 0.00 39.81 2.40
5481 6296 3.862267 GTGATCTTGAGTGAGATTGTCGG 59.138 47.826 0.00 0.00 36.54 4.79
5490 6305 1.066858 TGAGATTGTCGGGAGCAGTTC 60.067 52.381 0.00 0.00 0.00 3.01
5492 6307 0.250513 GATTGTCGGGAGCAGTTCCT 59.749 55.000 2.91 0.00 45.98 3.36
5496 6311 0.460987 GTCGGGAGCAGTTCCTCATG 60.461 60.000 2.91 0.00 45.98 3.07
5497 6312 0.904865 TCGGGAGCAGTTCCTCATGT 60.905 55.000 2.91 0.00 45.98 3.21
5498 6313 0.036010 CGGGAGCAGTTCCTCATGTT 60.036 55.000 2.91 0.00 45.98 2.71
5499 6314 1.611673 CGGGAGCAGTTCCTCATGTTT 60.612 52.381 2.91 0.00 45.98 2.83
5500 6315 1.815003 GGGAGCAGTTCCTCATGTTTG 59.185 52.381 2.91 0.00 45.98 2.93
5501 6316 1.815003 GGAGCAGTTCCTCATGTTTGG 59.185 52.381 0.00 0.00 43.16 3.28
5502 6317 1.815003 GAGCAGTTCCTCATGTTTGGG 59.185 52.381 0.00 0.00 0.00 4.12
5503 6318 1.145738 AGCAGTTCCTCATGTTTGGGT 59.854 47.619 0.00 0.00 0.00 4.51
5504 6319 1.963515 GCAGTTCCTCATGTTTGGGTT 59.036 47.619 0.00 0.00 0.00 4.11
5505 6320 2.288395 GCAGTTCCTCATGTTTGGGTTG 60.288 50.000 0.00 0.00 0.00 3.77
5506 6321 2.958355 CAGTTCCTCATGTTTGGGTTGT 59.042 45.455 0.00 0.00 0.00 3.32
5507 6322 3.384467 CAGTTCCTCATGTTTGGGTTGTT 59.616 43.478 0.00 0.00 0.00 2.83
5508 6323 4.030216 AGTTCCTCATGTTTGGGTTGTTT 58.970 39.130 0.00 0.00 0.00 2.83
5509 6324 4.469586 AGTTCCTCATGTTTGGGTTGTTTT 59.530 37.500 0.00 0.00 0.00 2.43
5510 6325 5.045942 AGTTCCTCATGTTTGGGTTGTTTTT 60.046 36.000 0.00 0.00 0.00 1.94
5511 6326 4.764172 TCCTCATGTTTGGGTTGTTTTTG 58.236 39.130 0.00 0.00 0.00 2.44
5512 6327 4.467795 TCCTCATGTTTGGGTTGTTTTTGA 59.532 37.500 0.00 0.00 0.00 2.69
5513 6328 5.046304 TCCTCATGTTTGGGTTGTTTTTGAA 60.046 36.000 0.00 0.00 0.00 2.69
5514 6329 5.645497 CCTCATGTTTGGGTTGTTTTTGAAA 59.355 36.000 0.00 0.00 0.00 2.69
5515 6330 6.183360 CCTCATGTTTGGGTTGTTTTTGAAAG 60.183 38.462 0.00 0.00 0.00 2.62
5516 6331 6.467677 TCATGTTTGGGTTGTTTTTGAAAGA 58.532 32.000 0.00 0.00 0.00 2.52
5517 6332 6.370166 TCATGTTTGGGTTGTTTTTGAAAGAC 59.630 34.615 0.00 0.00 0.00 3.01
5518 6333 5.611374 TGTTTGGGTTGTTTTTGAAAGACA 58.389 33.333 0.00 0.00 0.00 3.41
5519 6334 5.698545 TGTTTGGGTTGTTTTTGAAAGACAG 59.301 36.000 1.54 0.00 0.00 3.51
5520 6335 3.855858 TGGGTTGTTTTTGAAAGACAGC 58.144 40.909 6.85 6.85 0.00 4.40
5521 6336 3.259374 TGGGTTGTTTTTGAAAGACAGCA 59.741 39.130 15.14 0.00 0.00 4.41
5522 6337 3.865164 GGGTTGTTTTTGAAAGACAGCAG 59.135 43.478 15.14 0.00 0.00 4.24
5523 6338 3.865164 GGTTGTTTTTGAAAGACAGCAGG 59.135 43.478 15.14 0.00 0.00 4.85
5524 6339 4.381505 GGTTGTTTTTGAAAGACAGCAGGA 60.382 41.667 15.14 0.00 0.00 3.86
5525 6340 4.637483 TGTTTTTGAAAGACAGCAGGAG 57.363 40.909 0.00 0.00 0.00 3.69
5526 6341 4.269183 TGTTTTTGAAAGACAGCAGGAGA 58.731 39.130 0.00 0.00 0.00 3.71
5527 6342 4.336433 TGTTTTTGAAAGACAGCAGGAGAG 59.664 41.667 0.00 0.00 0.00 3.20
5528 6343 2.175878 TTGAAAGACAGCAGGAGAGC 57.824 50.000 0.00 0.00 0.00 4.09
5556 6371 1.340889 CATGTTTGGGTTGTGAGGGTG 59.659 52.381 0.00 0.00 0.00 4.61
5571 6387 1.669440 GGTGCTCCGTGTGGAAGTA 59.331 57.895 0.00 0.00 45.87 2.24
5572 6388 0.034337 GGTGCTCCGTGTGGAAGTAA 59.966 55.000 0.00 0.00 45.87 2.24
5655 6474 3.475566 TGCCCTTCAGTCATATGTAGC 57.524 47.619 1.90 0.00 0.00 3.58
5662 6481 2.049526 TCATATGTAGCGGCGCCG 60.050 61.111 43.13 43.13 43.09 6.46
5713 6532 6.341316 TCAATAGTTTCTGCGCTTCTTAGAT 58.659 36.000 9.73 0.00 0.00 1.98
5714 6533 7.489160 TCAATAGTTTCTGCGCTTCTTAGATA 58.511 34.615 9.73 0.00 0.00 1.98
5715 6534 7.979537 TCAATAGTTTCTGCGCTTCTTAGATAA 59.020 33.333 9.73 0.00 0.00 1.75
5716 6535 7.938563 ATAGTTTCTGCGCTTCTTAGATAAG 57.061 36.000 9.73 0.00 34.65 1.73
5739 6558 4.660789 ACAATTCTTGCAAGCAGTTCTT 57.339 36.364 21.99 0.00 34.78 2.52
5760 6579 1.467920 ATAAAGCTGAGCTGGCCAAC 58.532 50.000 8.16 0.92 39.62 3.77
5847 6681 8.621532 AAGAAGCTGTTGTCTGTTAATATTCA 57.378 30.769 0.00 0.00 0.00 2.57
5904 6740 1.734465 GCAAAGCACATCGTTAGAGCT 59.266 47.619 0.00 0.00 37.08 4.09
5918 6754 6.048509 TCGTTAGAGCTGCATCAATCATTAA 58.951 36.000 1.02 0.00 0.00 1.40
5928 6764 7.003939 TGCATCAATCATTAACTGTCTAACG 57.996 36.000 0.00 0.00 0.00 3.18
5929 6765 5.904080 GCATCAATCATTAACTGTCTAACGC 59.096 40.000 0.00 0.00 0.00 4.84
5936 6772 0.032952 AACTGTCTAACGCAGCGGAA 59.967 50.000 21.15 5.39 37.47 4.30
5991 6827 2.692824 CCCATGCCACCATCCCTGA 61.693 63.158 0.00 0.00 0.00 3.86
5997 6833 3.464720 TGCCACCATCCCTGATTTAAA 57.535 42.857 0.00 0.00 0.00 1.52
5998 6834 3.784178 TGCCACCATCCCTGATTTAAAA 58.216 40.909 0.00 0.00 0.00 1.52
6030 6866 6.866010 TTTCTGTGCTGCAATCGATTATAT 57.134 33.333 10.97 0.00 0.00 0.86
6033 6869 6.661669 TCTGTGCTGCAATCGATTATATTTG 58.338 36.000 10.97 0.00 0.00 2.32
6034 6870 6.260714 TCTGTGCTGCAATCGATTATATTTGT 59.739 34.615 10.97 0.00 0.00 2.83
6035 6871 6.429624 TGTGCTGCAATCGATTATATTTGTC 58.570 36.000 10.97 0.00 0.00 3.18
6036 6872 6.038050 TGTGCTGCAATCGATTATATTTGTCA 59.962 34.615 10.97 1.77 0.00 3.58
6037 6873 6.576313 GTGCTGCAATCGATTATATTTGTCAG 59.424 38.462 10.97 11.08 0.00 3.51
6038 6874 5.566774 GCTGCAATCGATTATATTTGTCAGC 59.433 40.000 10.97 16.08 39.51 4.26
6039 6875 6.616774 TGCAATCGATTATATTTGTCAGCA 57.383 33.333 10.97 9.18 0.00 4.41
6040 6876 7.205737 TGCAATCGATTATATTTGTCAGCAT 57.794 32.000 10.97 0.00 0.00 3.79
6047 6884 8.839343 TCGATTATATTTGTCAGCATTGTGATT 58.161 29.630 0.00 0.00 0.00 2.57
6082 6919 9.589461 CCTCTTCTAGTAGTTCCATATCCTTAA 57.411 37.037 0.00 0.00 0.00 1.85
6127 6964 8.879342 AAAAGTACTATACAATGCTCTAGCTG 57.121 34.615 0.00 0.00 42.66 4.24
6237 7385 4.999469 TGGACCACTCCATGCATATATT 57.001 40.909 0.00 0.00 42.15 1.28
6238 7386 4.654915 TGGACCACTCCATGCATATATTG 58.345 43.478 0.00 0.00 42.15 1.90
6239 7387 4.012374 GGACCACTCCATGCATATATTGG 58.988 47.826 0.00 7.07 36.42 3.16
6240 7388 4.012374 GACCACTCCATGCATATATTGGG 58.988 47.826 16.49 6.90 0.00 4.12
6241 7389 3.657239 ACCACTCCATGCATATATTGGGA 59.343 43.478 16.49 10.21 0.00 4.37
6242 7390 4.293102 ACCACTCCATGCATATATTGGGAT 59.707 41.667 16.49 0.00 0.00 3.85
6297 7445 4.707030 TCATTGCCAAGTCATAGCTTTG 57.293 40.909 0.00 0.00 0.00 2.77
6350 7499 8.605325 ATTACAATAACACCTACTACCTCTGT 57.395 34.615 0.00 0.00 0.00 3.41
6351 7500 9.705103 ATTACAATAACACCTACTACCTCTGTA 57.295 33.333 0.00 0.00 0.00 2.74
6352 7501 7.401955 ACAATAACACCTACTACCTCTGTAC 57.598 40.000 0.00 0.00 0.00 2.90
6353 7502 6.379417 ACAATAACACCTACTACCTCTGTACC 59.621 42.308 0.00 0.00 0.00 3.34
6354 7503 4.393239 AACACCTACTACCTCTGTACCA 57.607 45.455 0.00 0.00 0.00 3.25
6355 7504 4.393239 ACACCTACTACCTCTGTACCAA 57.607 45.455 0.00 0.00 0.00 3.67
6356 7505 4.744237 ACACCTACTACCTCTGTACCAAA 58.256 43.478 0.00 0.00 0.00 3.28
6357 7506 5.149976 ACACCTACTACCTCTGTACCAAAA 58.850 41.667 0.00 0.00 0.00 2.44
6358 7507 5.783875 ACACCTACTACCTCTGTACCAAAAT 59.216 40.000 0.00 0.00 0.00 1.82
6359 7508 6.955851 ACACCTACTACCTCTGTACCAAAATA 59.044 38.462 0.00 0.00 0.00 1.40
6360 7509 7.622479 ACACCTACTACCTCTGTACCAAAATAT 59.378 37.037 0.00 0.00 0.00 1.28
6361 7510 9.139734 CACCTACTACCTCTGTACCAAAATATA 57.860 37.037 0.00 0.00 0.00 0.86
6362 7511 9.719433 ACCTACTACCTCTGTACCAAAATATAA 57.281 33.333 0.00 0.00 0.00 0.98
6392 7541 9.798994 ATTTTTGCATTTCAATTTAAACTGCAA 57.201 22.222 19.55 19.55 38.96 4.08
6393 7542 9.630098 TTTTTGCATTTCAATTTAAACTGCAAA 57.370 22.222 24.50 24.50 42.60 3.68
6394 7543 9.630098 TTTTGCATTTCAATTTAAACTGCAAAA 57.370 22.222 28.60 28.60 45.36 2.44
6395 7544 9.630098 TTTGCATTTCAATTTAAACTGCAAAAA 57.370 22.222 25.20 15.43 42.13 1.94
6396 7545 8.612233 TGCATTTCAATTTAAACTGCAAAAAC 57.388 26.923 14.39 0.00 33.75 2.43
6397 7546 7.427606 TGCATTTCAATTTAAACTGCAAAAACG 59.572 29.630 14.39 0.00 33.75 3.60
6398 7547 7.427895 GCATTTCAATTTAAACTGCAAAAACGT 59.572 29.630 11.39 0.00 0.00 3.99
6399 7548 8.932963 CATTTCAATTTAAACTGCAAAAACGTC 58.067 29.630 0.00 0.00 0.00 4.34
6400 7549 7.820044 TTCAATTTAAACTGCAAAAACGTCT 57.180 28.000 0.00 0.00 0.00 4.18
6401 7550 7.820044 TCAATTTAAACTGCAAAAACGTCTT 57.180 28.000 0.00 0.00 0.00 3.01
6402 7551 8.912787 TCAATTTAAACTGCAAAAACGTCTTA 57.087 26.923 0.00 0.00 0.00 2.10
6403 7552 9.522804 TCAATTTAAACTGCAAAAACGTCTTAT 57.477 25.926 0.00 0.00 0.00 1.73
6410 7559 7.867445 ACTGCAAAAACGTCTTATATTTTGG 57.133 32.000 17.78 8.43 41.02 3.28
6411 7560 7.430441 ACTGCAAAAACGTCTTATATTTTGGT 58.570 30.769 17.78 8.90 41.02 3.67
6412 7561 8.569641 ACTGCAAAAACGTCTTATATTTTGGTA 58.430 29.630 17.78 0.00 41.02 3.25
6413 7562 8.730970 TGCAAAAACGTCTTATATTTTGGTAC 57.269 30.769 17.78 6.55 41.02 3.34
6414 7563 8.350722 TGCAAAAACGTCTTATATTTTGGTACA 58.649 29.630 17.78 8.43 41.02 2.90
6415 7564 8.846607 GCAAAAACGTCTTATATTTTGGTACAG 58.153 33.333 17.78 0.00 42.39 2.74
6419 7568 8.433421 AACGTCTTATATTTTGGTACAGATGG 57.567 34.615 0.00 0.00 42.39 3.51
6420 7569 7.788026 ACGTCTTATATTTTGGTACAGATGGA 58.212 34.615 0.00 0.00 42.39 3.41
6421 7570 7.926555 ACGTCTTATATTTTGGTACAGATGGAG 59.073 37.037 0.00 0.00 42.39 3.86
6443 7592 5.178797 AGTATGTTTGTAGTGGCATCTGTC 58.821 41.667 0.00 0.00 0.00 3.51
6522 7675 3.069729 ACTTATCACAGGATAACGGCTCC 59.930 47.826 0.00 0.00 40.25 4.70
6537 7690 3.632145 ACGGCTCCCATATTGTTCATTTC 59.368 43.478 0.00 0.00 0.00 2.17
6633 7786 3.491447 GCATTCCGGCAGCATTTTCTATT 60.491 43.478 0.00 0.00 0.00 1.73
6846 7999 1.384525 AGGACGGAGATCAACGAGAG 58.615 55.000 14.72 0.00 0.00 3.20
7073 8232 1.833630 TGTATGGAAGGCTGGACAGAG 59.166 52.381 3.00 0.00 0.00 3.35
7099 8259 7.223777 GGCAATGCTTAAACTTTGTTTAACTGA 59.776 33.333 4.82 1.08 0.00 3.41
7287 8451 3.149196 GTTGGGCTGAGAAAATGAGTGA 58.851 45.455 0.00 0.00 0.00 3.41
7396 8573 4.180057 GCAATGTTTTCTCCACACACAAA 58.820 39.130 0.00 0.00 0.00 2.83
7399 8576 6.672836 GCAATGTTTTCTCCACACACAAAAAG 60.673 38.462 0.00 0.00 0.00 2.27
7419 8596 3.947868 AGGAGAGATGGTGTCAATGTTG 58.052 45.455 0.00 0.00 0.00 3.33
7455 8632 5.650543 ACTAACTTTTGGTTTGACAGCAAG 58.349 37.500 0.00 0.00 43.73 4.01
7463 8640 3.882888 TGGTTTGACAGCAAGAAGTTAGG 59.117 43.478 0.00 0.00 35.04 2.69
7475 8652 5.420409 CAAGAAGTTAGGTGGTCCATAGAC 58.580 45.833 0.00 0.00 42.73 2.59
7521 8698 5.983720 GCCGCTTTCAGATAACTAGATAACA 59.016 40.000 0.00 0.00 0.00 2.41
7633 8815 2.827755 TCTACCCTCACCAAGCACATA 58.172 47.619 0.00 0.00 0.00 2.29
7652 8835 7.173735 AGCACATATAATCGAAGATTGCAATGA 59.826 33.333 18.59 8.21 45.12 2.57
7670 8853 2.318908 TGATCTTGCAACTGGCCTTTT 58.681 42.857 3.32 0.00 43.89 2.27
7671 8854 2.297033 TGATCTTGCAACTGGCCTTTTC 59.703 45.455 3.32 0.00 43.89 2.29
7676 8859 1.836802 TGCAACTGGCCTTTTCCTTTT 59.163 42.857 3.32 0.00 43.89 2.27
7677 8860 2.238395 TGCAACTGGCCTTTTCCTTTTT 59.762 40.909 3.32 0.00 43.89 1.94
7699 8882 8.871686 TTTTTCTTTCTTTGAGATAAACTGGC 57.128 30.769 0.00 0.00 0.00 4.85
7700 8883 6.575162 TTCTTTCTTTGAGATAAACTGGCC 57.425 37.500 0.00 0.00 0.00 5.36
7701 8884 5.880901 TCTTTCTTTGAGATAAACTGGCCT 58.119 37.500 3.32 0.00 0.00 5.19
7702 8885 6.306987 TCTTTCTTTGAGATAAACTGGCCTT 58.693 36.000 3.32 0.00 0.00 4.35
7703 8886 6.777580 TCTTTCTTTGAGATAAACTGGCCTTT 59.222 34.615 3.32 0.00 0.00 3.11
7704 8887 5.964958 TCTTTGAGATAAACTGGCCTTTG 57.035 39.130 3.32 0.00 0.00 2.77
7705 8888 5.385198 TCTTTGAGATAAACTGGCCTTTGT 58.615 37.500 3.32 0.00 0.00 2.83
7706 8889 5.473504 TCTTTGAGATAAACTGGCCTTTGTC 59.526 40.000 3.32 5.16 0.00 3.18
7707 8890 4.640771 TGAGATAAACTGGCCTTTGTCT 57.359 40.909 14.20 14.20 35.10 3.41
7708 8891 4.985538 TGAGATAAACTGGCCTTTGTCTT 58.014 39.130 15.10 3.30 33.22 3.01
7709 8892 4.761739 TGAGATAAACTGGCCTTTGTCTTG 59.238 41.667 15.10 0.00 33.22 3.02
7710 8893 3.507622 AGATAAACTGGCCTTTGTCTTGC 59.492 43.478 3.32 0.00 29.89 4.01
7711 8894 1.484038 AAACTGGCCTTTGTCTTGCA 58.516 45.000 3.32 0.00 0.00 4.08
7712 8895 1.708341 AACTGGCCTTTGTCTTGCAT 58.292 45.000 3.32 0.00 0.00 3.96
7713 8896 1.251251 ACTGGCCTTTGTCTTGCATC 58.749 50.000 3.32 0.00 0.00 3.91
7714 8897 1.250328 CTGGCCTTTGTCTTGCATCA 58.750 50.000 3.32 0.00 0.00 3.07
7744 8927 2.696187 GGATGGTCCAGTAGAGGAAGAC 59.304 54.545 0.00 0.00 39.92 3.01
7750 8933 3.816523 GTCCAGTAGAGGAAGACGATAGG 59.183 52.174 0.00 0.00 39.92 2.57
7790 8973 9.098355 TCAGATAATTAGATGAGGTTTTCGTTG 57.902 33.333 0.00 0.00 0.00 4.10
7805 8988 6.415867 GGTTTTCGTTGTCCTTTAGTAAAAGC 59.584 38.462 0.00 0.00 40.73 3.51
7826 9009 1.814394 TGTCCTTCATGATGCAGCAAC 59.186 47.619 9.54 1.31 0.00 4.17
7828 9011 1.814394 TCCTTCATGATGCAGCAACAC 59.186 47.619 9.54 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.885297 CCTATTTGTCGCAAATGGATCCT 59.115 43.478 21.30 0.00 0.00 3.24
56 57 1.748493 CAGTGGGAGCTCACTAGACTC 59.252 57.143 18.70 1.03 45.24 3.36
146 147 4.589908 TGAAGATGTTTTCTAGGGCCTTC 58.410 43.478 13.45 0.00 33.05 3.46
152 153 6.976925 GGCAATTCATGAAGATGTTTTCTAGG 59.023 38.462 14.54 0.00 33.05 3.02
161 162 7.273320 ACTGATTAGGCAATTCATGAAGATG 57.727 36.000 14.54 15.41 0.00 2.90
162 163 7.558807 TCAACTGATTAGGCAATTCATGAAGAT 59.441 33.333 14.54 2.46 0.00 2.40
328 332 3.013921 GGAACTATCGTGGATTTGGCAA 58.986 45.455 0.00 0.00 0.00 4.52
329 333 2.026729 TGGAACTATCGTGGATTTGGCA 60.027 45.455 0.00 0.00 0.00 4.92
330 334 2.639065 TGGAACTATCGTGGATTTGGC 58.361 47.619 0.00 0.00 0.00 4.52
331 335 4.006989 TGTTGGAACTATCGTGGATTTGG 58.993 43.478 0.00 0.00 0.00 3.28
332 336 5.818136 ATGTTGGAACTATCGTGGATTTG 57.182 39.130 0.00 0.00 0.00 2.32
334 338 6.098409 ACTCTATGTTGGAACTATCGTGGATT 59.902 38.462 0.00 0.00 0.00 3.01
335 339 5.598830 ACTCTATGTTGGAACTATCGTGGAT 59.401 40.000 0.00 0.00 0.00 3.41
337 341 5.263968 ACTCTATGTTGGAACTATCGTGG 57.736 43.478 0.00 0.00 0.00 4.94
338 342 8.873215 ATAAACTCTATGTTGGAACTATCGTG 57.127 34.615 0.00 0.00 39.13 4.35
339 343 8.142551 GGATAAACTCTATGTTGGAACTATCGT 58.857 37.037 0.00 0.00 39.13 3.73
357 361 2.290641 TGCGGGTGAATGTGGATAAACT 60.291 45.455 0.00 0.00 0.00 2.66
526 530 9.976776 TGGCCCGTGGAATTATTATTATTATTA 57.023 29.630 0.00 0.00 0.00 0.98
570 596 5.112686 GGCGTTGAGTTTCTAGAGATCAAT 58.887 41.667 15.28 0.00 32.93 2.57
579 605 2.762745 GGTCTTGGCGTTGAGTTTCTA 58.237 47.619 0.00 0.00 0.00 2.10
672 698 1.009900 CGACCGGCGTAGAGATCAC 60.010 63.158 6.01 0.00 34.64 3.06
723 752 7.919690 TGTACATATACATGCAGAGCTTTTTC 58.080 34.615 0.00 0.00 36.34 2.29
753 783 5.114780 CACAGCAGAGCATACTTTGATACT 58.885 41.667 0.00 0.00 29.43 2.12
5014 5828 1.130054 TTCTGCTGGAGTCAGGCCTT 61.130 55.000 0.00 0.00 41.19 4.35
5429 6244 3.916359 TCCAACTGTGGTCAAACACTA 57.084 42.857 0.00 0.00 46.11 2.74
5452 6267 5.384063 TCTCACTCAAGATCACTCAAGAC 57.616 43.478 0.00 0.00 0.00 3.01
5456 6271 5.620879 CGACAATCTCACTCAAGATCACTCA 60.621 44.000 0.00 0.00 34.90 3.41
5457 6272 4.797868 CGACAATCTCACTCAAGATCACTC 59.202 45.833 0.00 0.00 34.90 3.51
5458 6273 4.381398 CCGACAATCTCACTCAAGATCACT 60.381 45.833 0.00 0.00 34.90 3.41
5459 6274 3.862267 CCGACAATCTCACTCAAGATCAC 59.138 47.826 0.00 0.00 34.90 3.06
5460 6275 3.118992 CCCGACAATCTCACTCAAGATCA 60.119 47.826 0.00 0.00 34.90 2.92
5461 6276 3.131223 TCCCGACAATCTCACTCAAGATC 59.869 47.826 0.00 0.00 34.90 2.75
5462 6277 3.099905 TCCCGACAATCTCACTCAAGAT 58.900 45.455 0.00 0.00 37.61 2.40
5463 6278 2.493675 CTCCCGACAATCTCACTCAAGA 59.506 50.000 0.00 0.00 0.00 3.02
5464 6279 2.886081 CTCCCGACAATCTCACTCAAG 58.114 52.381 0.00 0.00 0.00 3.02
5465 6280 1.066858 GCTCCCGACAATCTCACTCAA 60.067 52.381 0.00 0.00 0.00 3.02
5466 6281 0.532573 GCTCCCGACAATCTCACTCA 59.467 55.000 0.00 0.00 0.00 3.41
5481 6296 1.815003 CCAAACATGAGGAACTGCTCC 59.185 52.381 0.00 0.00 41.55 4.70
5490 6305 4.764172 TCAAAAACAACCCAAACATGAGG 58.236 39.130 0.00 0.00 0.00 3.86
5492 6307 6.370166 GTCTTTCAAAAACAACCCAAACATGA 59.630 34.615 0.00 0.00 0.00 3.07
5496 6311 5.390461 GCTGTCTTTCAAAAACAACCCAAAC 60.390 40.000 0.00 0.00 0.00 2.93
5497 6312 4.693095 GCTGTCTTTCAAAAACAACCCAAA 59.307 37.500 0.00 0.00 0.00 3.28
5498 6313 4.249661 GCTGTCTTTCAAAAACAACCCAA 58.750 39.130 0.00 0.00 0.00 4.12
5499 6314 3.259374 TGCTGTCTTTCAAAAACAACCCA 59.741 39.130 0.00 0.00 0.00 4.51
5500 6315 3.855858 TGCTGTCTTTCAAAAACAACCC 58.144 40.909 0.00 0.00 0.00 4.11
5501 6316 3.865164 CCTGCTGTCTTTCAAAAACAACC 59.135 43.478 0.00 0.00 0.00 3.77
5502 6317 4.743493 TCCTGCTGTCTTTCAAAAACAAC 58.257 39.130 0.00 0.00 0.00 3.32
5503 6318 4.704540 TCTCCTGCTGTCTTTCAAAAACAA 59.295 37.500 0.00 0.00 0.00 2.83
5504 6319 4.269183 TCTCCTGCTGTCTTTCAAAAACA 58.731 39.130 0.00 0.00 0.00 2.83
5505 6320 4.791088 GCTCTCCTGCTGTCTTTCAAAAAC 60.791 45.833 0.00 0.00 0.00 2.43
5506 6321 3.316308 GCTCTCCTGCTGTCTTTCAAAAA 59.684 43.478 0.00 0.00 0.00 1.94
5507 6322 2.880890 GCTCTCCTGCTGTCTTTCAAAA 59.119 45.455 0.00 0.00 0.00 2.44
5508 6323 2.105477 AGCTCTCCTGCTGTCTTTCAAA 59.895 45.455 0.00 0.00 42.33 2.69
5509 6324 1.696336 AGCTCTCCTGCTGTCTTTCAA 59.304 47.619 0.00 0.00 42.33 2.69
5510 6325 1.346062 AGCTCTCCTGCTGTCTTTCA 58.654 50.000 0.00 0.00 42.33 2.69
5520 6335 1.338864 ACATGAACAGCAGCTCTCCTG 60.339 52.381 0.00 0.00 44.67 3.86
5521 6336 0.982704 ACATGAACAGCAGCTCTCCT 59.017 50.000 0.00 0.00 0.00 3.69
5522 6337 1.818642 AACATGAACAGCAGCTCTCC 58.181 50.000 0.00 0.00 0.00 3.71
5523 6338 2.095364 CCAAACATGAACAGCAGCTCTC 60.095 50.000 0.00 0.00 0.00 3.20
5524 6339 1.884579 CCAAACATGAACAGCAGCTCT 59.115 47.619 0.00 0.00 0.00 4.09
5525 6340 1.068055 CCCAAACATGAACAGCAGCTC 60.068 52.381 0.00 0.00 0.00 4.09
5526 6341 0.963962 CCCAAACATGAACAGCAGCT 59.036 50.000 0.00 0.00 0.00 4.24
5527 6342 0.675633 ACCCAAACATGAACAGCAGC 59.324 50.000 0.00 0.00 0.00 5.25
5528 6343 2.101249 ACAACCCAAACATGAACAGCAG 59.899 45.455 0.00 0.00 0.00 4.24
5529 6344 2.106566 ACAACCCAAACATGAACAGCA 58.893 42.857 0.00 0.00 0.00 4.41
5530 6345 2.100584 TCACAACCCAAACATGAACAGC 59.899 45.455 0.00 0.00 0.00 4.40
5531 6346 3.243501 CCTCACAACCCAAACATGAACAG 60.244 47.826 0.00 0.00 0.00 3.16
5532 6347 2.692557 CCTCACAACCCAAACATGAACA 59.307 45.455 0.00 0.00 0.00 3.18
5533 6348 2.035832 CCCTCACAACCCAAACATGAAC 59.964 50.000 0.00 0.00 0.00 3.18
5534 6349 2.315176 CCCTCACAACCCAAACATGAA 58.685 47.619 0.00 0.00 0.00 2.57
5535 6350 1.216678 ACCCTCACAACCCAAACATGA 59.783 47.619 0.00 0.00 0.00 3.07
5556 6371 3.751698 AGAAATTTACTTCCACACGGAGC 59.248 43.478 0.00 0.00 44.10 4.70
5571 6387 9.448438 GGCATAAATGAACCCTAAAAGAAATTT 57.552 29.630 0.00 0.00 34.92 1.82
5572 6388 8.825774 AGGCATAAATGAACCCTAAAAGAAATT 58.174 29.630 0.00 0.00 0.00 1.82
5655 6474 2.100216 CCAGAAATTTCGGCGCCG 59.900 61.111 42.13 42.13 41.35 6.46
5662 6481 2.229784 CAGGACTGCCACCAGAAATTTC 59.770 50.000 10.33 10.33 41.77 2.17
5696 6515 6.627243 TGTACTTATCTAAGAAGCGCAGAAA 58.373 36.000 11.47 0.29 37.08 2.52
5714 6533 7.631377 AAAGAACTGCTTGCAAGAATTGTACTT 60.631 33.333 30.39 19.25 41.45 2.24
5715 6534 6.183360 AAAGAACTGCTTGCAAGAATTGTACT 60.183 34.615 30.39 15.04 41.45 2.73
5716 6535 5.979517 AAAGAACTGCTTGCAAGAATTGTAC 59.020 36.000 30.39 10.65 41.45 2.90
5739 6558 3.016736 GTTGGCCAGCTCAGCTTTATAA 58.983 45.455 13.08 0.00 36.40 0.98
5760 6579 2.336945 TCTCCATGCTGTAATGCTGG 57.663 50.000 0.00 0.00 34.70 4.85
5894 6730 3.525268 TGATTGATGCAGCTCTAACGA 57.475 42.857 2.53 0.00 0.00 3.85
5895 6731 4.808077 AATGATTGATGCAGCTCTAACG 57.192 40.909 2.53 0.00 0.00 3.18
5904 6740 6.456853 GCGTTAGACAGTTAATGATTGATGCA 60.457 38.462 0.00 0.00 0.00 3.96
5918 6754 0.246635 ATTCCGCTGCGTTAGACAGT 59.753 50.000 21.59 0.00 37.47 3.55
5928 6764 3.499537 TGATTCATATGACATTCCGCTGC 59.500 43.478 4.48 0.00 0.00 5.25
5929 6765 4.992951 TCTGATTCATATGACATTCCGCTG 59.007 41.667 4.48 0.00 0.00 5.18
5936 6772 4.909695 TCCTGGGTCTGATTCATATGACAT 59.090 41.667 4.48 2.65 0.00 3.06
5997 6833 3.132646 TGCAGCACAGAAAATGGTCTTTT 59.867 39.130 0.00 0.00 0.00 2.27
5998 6834 2.694628 TGCAGCACAGAAAATGGTCTTT 59.305 40.909 0.00 0.00 0.00 2.52
6014 6850 5.566774 GCTGACAAATATAATCGATTGCAGC 59.433 40.000 20.87 19.37 41.18 5.25
6030 6866 5.391843 CCACGATAATCACAATGCTGACAAA 60.392 40.000 0.00 0.00 0.00 2.83
6033 6869 3.623060 ACCACGATAATCACAATGCTGAC 59.377 43.478 0.00 0.00 0.00 3.51
6034 6870 3.871006 GACCACGATAATCACAATGCTGA 59.129 43.478 0.00 0.00 0.00 4.26
6035 6871 3.002656 GGACCACGATAATCACAATGCTG 59.997 47.826 0.00 0.00 0.00 4.41
6036 6872 3.118261 AGGACCACGATAATCACAATGCT 60.118 43.478 0.00 0.00 0.00 3.79
6037 6873 3.206150 AGGACCACGATAATCACAATGC 58.794 45.455 0.00 0.00 0.00 3.56
6038 6874 4.697514 AGAGGACCACGATAATCACAATG 58.302 43.478 0.00 0.00 0.00 2.82
6039 6875 5.129485 AGAAGAGGACCACGATAATCACAAT 59.871 40.000 0.00 0.00 0.00 2.71
6040 6876 4.466370 AGAAGAGGACCACGATAATCACAA 59.534 41.667 0.00 0.00 0.00 3.33
6047 6884 5.627182 ACTACTAGAAGAGGACCACGATA 57.373 43.478 0.00 0.00 0.00 2.92
6093 6930 9.450807 GCATTGTATAGTACTTTTAAGGCATTG 57.549 33.333 0.00 0.49 0.00 2.82
6094 6931 9.408648 AGCATTGTATAGTACTTTTAAGGCATT 57.591 29.630 0.00 0.00 0.00 3.56
6095 6932 8.980481 AGCATTGTATAGTACTTTTAAGGCAT 57.020 30.769 0.00 0.00 0.00 4.40
6096 6933 8.265055 AGAGCATTGTATAGTACTTTTAAGGCA 58.735 33.333 0.00 0.00 0.00 4.75
6097 6934 8.664211 AGAGCATTGTATAGTACTTTTAAGGC 57.336 34.615 0.00 6.17 0.00 4.35
6101 6938 9.967346 CAGCTAGAGCATTGTATAGTACTTTTA 57.033 33.333 0.00 0.00 45.16 1.52
6102 6939 8.478877 ACAGCTAGAGCATTGTATAGTACTTTT 58.521 33.333 0.00 0.00 45.16 2.27
6103 6940 8.012957 ACAGCTAGAGCATTGTATAGTACTTT 57.987 34.615 0.00 0.00 45.16 2.66
6104 6941 7.589958 ACAGCTAGAGCATTGTATAGTACTT 57.410 36.000 0.00 0.00 45.16 2.24
6105 6942 7.589958 AACAGCTAGAGCATTGTATAGTACT 57.410 36.000 0.00 0.00 45.16 2.73
6106 6943 8.649973 AAAACAGCTAGAGCATTGTATAGTAC 57.350 34.615 4.01 0.00 45.16 2.73
6107 6944 9.745880 GTAAAACAGCTAGAGCATTGTATAGTA 57.254 33.333 4.01 0.00 45.16 1.82
6108 6945 8.258007 TGTAAAACAGCTAGAGCATTGTATAGT 58.742 33.333 4.01 0.00 45.16 2.12
6109 6946 8.543774 GTGTAAAACAGCTAGAGCATTGTATAG 58.456 37.037 4.01 0.00 45.16 1.31
6110 6947 8.038351 TGTGTAAAACAGCTAGAGCATTGTATA 58.962 33.333 4.01 0.00 45.16 1.47
6111 6948 6.878923 TGTGTAAAACAGCTAGAGCATTGTAT 59.121 34.615 4.01 0.00 45.16 2.29
6235 7383 9.317827 CTATCTGAAATTATCCCAAATCCCAAT 57.682 33.333 0.00 0.00 0.00 3.16
6236 7384 7.233348 GCTATCTGAAATTATCCCAAATCCCAA 59.767 37.037 0.00 0.00 0.00 4.12
6237 7385 6.721208 GCTATCTGAAATTATCCCAAATCCCA 59.279 38.462 0.00 0.00 0.00 4.37
6238 7386 6.950619 AGCTATCTGAAATTATCCCAAATCCC 59.049 38.462 0.00 0.00 0.00 3.85
6239 7387 8.414629 AAGCTATCTGAAATTATCCCAAATCC 57.585 34.615 0.00 0.00 0.00 3.01
6366 7515 9.798994 TTGCAGTTTAAATTGAAATGCAAAAAT 57.201 22.222 27.29 0.00 45.91 1.82
6370 7519 9.070149 GTTTTTGCAGTTTAAATTGAAATGCAA 57.930 25.926 26.27 26.27 46.86 4.08
6371 7520 7.427606 CGTTTTTGCAGTTTAAATTGAAATGCA 59.572 29.630 18.91 18.91 40.17 3.96
6372 7521 7.427895 ACGTTTTTGCAGTTTAAATTGAAATGC 59.572 29.630 14.48 14.48 0.00 3.56
6373 7522 8.819152 ACGTTTTTGCAGTTTAAATTGAAATG 57.181 26.923 14.30 12.34 0.00 2.32
6374 7523 8.878769 AGACGTTTTTGCAGTTTAAATTGAAAT 58.121 25.926 14.30 0.00 0.00 2.17
6375 7524 8.245701 AGACGTTTTTGCAGTTTAAATTGAAA 57.754 26.923 14.30 7.42 0.00 2.69
6376 7525 7.820044 AGACGTTTTTGCAGTTTAAATTGAA 57.180 28.000 14.30 0.78 0.00 2.69
6377 7526 7.820044 AAGACGTTTTTGCAGTTTAAATTGA 57.180 28.000 14.30 0.00 0.00 2.57
6384 7533 8.760569 CCAAAATATAAGACGTTTTTGCAGTTT 58.239 29.630 13.03 2.46 37.60 2.66
6385 7534 7.923878 ACCAAAATATAAGACGTTTTTGCAGTT 59.076 29.630 13.03 0.00 37.60 3.16
6386 7535 7.430441 ACCAAAATATAAGACGTTTTTGCAGT 58.570 30.769 13.03 6.29 37.60 4.40
6387 7536 7.867445 ACCAAAATATAAGACGTTTTTGCAG 57.133 32.000 13.03 5.81 37.60 4.41
6388 7537 8.350722 TGTACCAAAATATAAGACGTTTTTGCA 58.649 29.630 13.03 5.80 37.60 4.08
6389 7538 8.730970 TGTACCAAAATATAAGACGTTTTTGC 57.269 30.769 13.03 3.83 37.60 3.68
6393 7542 8.889717 CCATCTGTACCAAAATATAAGACGTTT 58.110 33.333 0.00 0.00 0.00 3.60
6394 7543 8.262227 TCCATCTGTACCAAAATATAAGACGTT 58.738 33.333 0.00 0.00 0.00 3.99
6395 7544 7.788026 TCCATCTGTACCAAAATATAAGACGT 58.212 34.615 0.00 0.00 0.00 4.34
6396 7545 7.926555 ACTCCATCTGTACCAAAATATAAGACG 59.073 37.037 0.00 0.00 0.00 4.18
6402 7551 9.920946 AAACATACTCCATCTGTACCAAAATAT 57.079 29.630 0.00 0.00 0.00 1.28
6403 7552 9.173021 CAAACATACTCCATCTGTACCAAAATA 57.827 33.333 0.00 0.00 0.00 1.40
6404 7553 7.669722 ACAAACATACTCCATCTGTACCAAAAT 59.330 33.333 0.00 0.00 0.00 1.82
6405 7554 7.001674 ACAAACATACTCCATCTGTACCAAAA 58.998 34.615 0.00 0.00 0.00 2.44
6406 7555 6.539173 ACAAACATACTCCATCTGTACCAAA 58.461 36.000 0.00 0.00 0.00 3.28
6407 7556 6.121776 ACAAACATACTCCATCTGTACCAA 57.878 37.500 0.00 0.00 0.00 3.67
6408 7557 5.755409 ACAAACATACTCCATCTGTACCA 57.245 39.130 0.00 0.00 0.00 3.25
6409 7558 6.757010 CACTACAAACATACTCCATCTGTACC 59.243 42.308 0.00 0.00 0.00 3.34
6410 7559 6.757010 CCACTACAAACATACTCCATCTGTAC 59.243 42.308 0.00 0.00 0.00 2.90
6411 7560 6.629515 GCCACTACAAACATACTCCATCTGTA 60.630 42.308 0.00 0.00 0.00 2.74
6412 7561 5.734720 CCACTACAAACATACTCCATCTGT 58.265 41.667 0.00 0.00 0.00 3.41
6413 7562 4.572389 GCCACTACAAACATACTCCATCTG 59.428 45.833 0.00 0.00 0.00 2.90
6414 7563 4.225042 TGCCACTACAAACATACTCCATCT 59.775 41.667 0.00 0.00 0.00 2.90
6415 7564 4.513442 TGCCACTACAAACATACTCCATC 58.487 43.478 0.00 0.00 0.00 3.51
6416 7565 4.568072 TGCCACTACAAACATACTCCAT 57.432 40.909 0.00 0.00 0.00 3.41
6417 7566 4.225042 AGATGCCACTACAAACATACTCCA 59.775 41.667 0.00 0.00 0.00 3.86
6418 7567 4.572389 CAGATGCCACTACAAACATACTCC 59.428 45.833 0.00 0.00 0.00 3.85
6419 7568 5.178797 ACAGATGCCACTACAAACATACTC 58.821 41.667 0.00 0.00 0.00 2.59
6420 7569 5.165961 ACAGATGCCACTACAAACATACT 57.834 39.130 0.00 0.00 0.00 2.12
6421 7570 4.935205 TGACAGATGCCACTACAAACATAC 59.065 41.667 0.00 0.00 0.00 2.39
6453 7605 6.299141 ACTCACTAAAACAAGACCATGATGT 58.701 36.000 0.00 0.00 0.00 3.06
6454 7606 6.808008 ACTCACTAAAACAAGACCATGATG 57.192 37.500 0.00 0.00 0.00 3.07
6455 7607 8.543774 AGATACTCACTAAAACAAGACCATGAT 58.456 33.333 0.00 0.00 0.00 2.45
6456 7608 7.907389 AGATACTCACTAAAACAAGACCATGA 58.093 34.615 0.00 0.00 0.00 3.07
6457 7609 9.307121 CTAGATACTCACTAAAACAAGACCATG 57.693 37.037 0.00 0.00 0.00 3.66
6470 7623 6.263412 AGGTAGGTTGCTAGATACTCACTA 57.737 41.667 0.00 0.00 0.00 2.74
6537 7690 2.054232 AATTCCAGAGCCTCTGCATG 57.946 50.000 16.49 3.19 42.98 4.06
6633 7786 2.809119 CACAATGTACTTGCCGTTGGTA 59.191 45.455 0.00 0.00 38.50 3.25
7073 8232 7.223777 TCAGTTAAACAAAGTTTAAGCATTGCC 59.776 33.333 13.56 3.21 0.00 4.52
7116 8276 6.702329 ACATCTAAGGACTCGAATGAACTTT 58.298 36.000 0.00 0.00 0.00 2.66
7126 8286 4.592485 ATGGCTAACATCTAAGGACTCG 57.408 45.455 0.00 0.00 33.53 4.18
7153 8313 1.786937 TGGCAACCCAACTTCACATT 58.213 45.000 0.00 0.00 38.46 2.71
7232 8392 4.321718 TCTGCTGAACTCCAATGAAGAAG 58.678 43.478 0.00 0.00 0.00 2.85
7233 8393 4.202398 ACTCTGCTGAACTCCAATGAAGAA 60.202 41.667 0.00 0.00 0.00 2.52
7234 8394 3.326006 ACTCTGCTGAACTCCAATGAAGA 59.674 43.478 0.00 0.00 0.00 2.87
7287 8451 7.335422 CCTAGTGAACTATTCAACATGAAAGCT 59.665 37.037 0.00 0.00 40.12 3.74
7396 8573 4.647564 ACATTGACACCATCTCTCCTTT 57.352 40.909 0.00 0.00 0.00 3.11
7399 8576 3.679389 ACAACATTGACACCATCTCTCC 58.321 45.455 0.00 0.00 0.00 3.71
7475 8652 2.562298 CCATGCTCTAGCTTCCTCTAGG 59.438 54.545 3.26 0.00 42.66 3.02
7539 8717 5.843673 TGCATCACAAAGGACAGTTTTTA 57.156 34.783 0.00 0.00 0.00 1.52
7600 8780 6.011981 TGGTGAGGGTAGATTTTTATCAAGGT 60.012 38.462 0.00 0.00 0.00 3.50
7601 8781 6.423182 TGGTGAGGGTAGATTTTTATCAAGG 58.577 40.000 0.00 0.00 0.00 3.61
7603 8783 6.377146 GCTTGGTGAGGGTAGATTTTTATCAA 59.623 38.462 0.00 0.00 0.00 2.57
7605 8785 5.885912 TGCTTGGTGAGGGTAGATTTTTATC 59.114 40.000 0.00 0.00 0.00 1.75
7606 8786 5.652452 GTGCTTGGTGAGGGTAGATTTTTAT 59.348 40.000 0.00 0.00 0.00 1.40
7607 8787 5.007682 GTGCTTGGTGAGGGTAGATTTTTA 58.992 41.667 0.00 0.00 0.00 1.52
7613 8795 1.656587 ATGTGCTTGGTGAGGGTAGA 58.343 50.000 0.00 0.00 0.00 2.59
7617 8799 3.748048 CGATTATATGTGCTTGGTGAGGG 59.252 47.826 0.00 0.00 0.00 4.30
7618 8800 4.631131 TCGATTATATGTGCTTGGTGAGG 58.369 43.478 0.00 0.00 0.00 3.86
7621 8803 6.791887 ATCTTCGATTATATGTGCTTGGTG 57.208 37.500 0.00 0.00 0.00 4.17
7622 8804 6.293626 GCAATCTTCGATTATATGTGCTTGGT 60.294 38.462 0.00 0.00 0.00 3.67
7633 8815 7.082602 GCAAGATCATTGCAATCTTCGATTAT 58.917 34.615 9.53 0.40 40.61 1.28
7652 8835 1.620323 GGAAAAGGCCAGTTGCAAGAT 59.380 47.619 5.01 0.00 43.89 2.40
7676 8859 6.777580 AGGCCAGTTTATCTCAAAGAAAGAAA 59.222 34.615 5.01 0.00 0.00 2.52
7677 8860 6.306987 AGGCCAGTTTATCTCAAAGAAAGAA 58.693 36.000 5.01 0.00 0.00 2.52
7678 8861 5.880901 AGGCCAGTTTATCTCAAAGAAAGA 58.119 37.500 5.01 0.00 0.00 2.52
7679 8862 6.581171 AAGGCCAGTTTATCTCAAAGAAAG 57.419 37.500 5.01 0.00 0.00 2.62
7680 8863 6.323739 ACAAAGGCCAGTTTATCTCAAAGAAA 59.676 34.615 5.01 0.00 0.00 2.52
7681 8864 5.833131 ACAAAGGCCAGTTTATCTCAAAGAA 59.167 36.000 5.01 0.00 0.00 2.52
7682 8865 5.385198 ACAAAGGCCAGTTTATCTCAAAGA 58.615 37.500 5.01 0.00 0.00 2.52
7683 8866 5.474876 AGACAAAGGCCAGTTTATCTCAAAG 59.525 40.000 5.01 0.00 0.00 2.77
7684 8867 5.385198 AGACAAAGGCCAGTTTATCTCAAA 58.615 37.500 5.01 0.00 0.00 2.69
7685 8868 4.985538 AGACAAAGGCCAGTTTATCTCAA 58.014 39.130 5.01 0.00 0.00 3.02
7686 8869 4.640771 AGACAAAGGCCAGTTTATCTCA 57.359 40.909 5.01 0.00 0.00 3.27
7687 8870 4.379918 GCAAGACAAAGGCCAGTTTATCTC 60.380 45.833 5.01 0.00 0.00 2.75
7688 8871 3.507622 GCAAGACAAAGGCCAGTTTATCT 59.492 43.478 5.01 0.00 0.00 1.98
7689 8872 3.255642 TGCAAGACAAAGGCCAGTTTATC 59.744 43.478 5.01 0.00 0.00 1.75
7690 8873 3.230134 TGCAAGACAAAGGCCAGTTTAT 58.770 40.909 5.01 0.00 0.00 1.40
7691 8874 2.660572 TGCAAGACAAAGGCCAGTTTA 58.339 42.857 5.01 0.00 0.00 2.01
7692 8875 1.484038 TGCAAGACAAAGGCCAGTTT 58.516 45.000 5.01 0.00 0.00 2.66
7693 8876 1.615392 GATGCAAGACAAAGGCCAGTT 59.385 47.619 5.01 0.00 0.00 3.16
7694 8877 1.251251 GATGCAAGACAAAGGCCAGT 58.749 50.000 5.01 0.00 0.00 4.00
7695 8878 1.250328 TGATGCAAGACAAAGGCCAG 58.750 50.000 5.01 0.00 0.00 4.85
7696 8879 1.702182 TTGATGCAAGACAAAGGCCA 58.298 45.000 5.01 0.00 0.00 5.36
7697 8880 2.407090 GTTTGATGCAAGACAAAGGCC 58.593 47.619 14.24 0.00 36.81 5.19
7698 8881 2.053627 CGTTTGATGCAAGACAAAGGC 58.946 47.619 17.17 8.42 36.81 4.35
7699 8882 3.624326 TCGTTTGATGCAAGACAAAGG 57.376 42.857 20.38 20.38 40.69 3.11
7700 8883 5.107760 CCAAATCGTTTGATGCAAGACAAAG 60.108 40.000 14.24 10.20 43.26 2.77
7701 8884 4.744137 CCAAATCGTTTGATGCAAGACAAA 59.256 37.500 11.21 11.21 43.26 2.83
7702 8885 4.037327 TCCAAATCGTTTGATGCAAGACAA 59.963 37.500 10.71 0.00 43.26 3.18
7703 8886 3.567585 TCCAAATCGTTTGATGCAAGACA 59.432 39.130 10.71 0.00 43.26 3.41
7704 8887 4.159377 TCCAAATCGTTTGATGCAAGAC 57.841 40.909 10.71 0.00 43.26 3.01
7705 8888 4.380761 CCATCCAAATCGTTTGATGCAAGA 60.381 41.667 10.71 1.68 43.26 3.02
7706 8889 3.861113 CCATCCAAATCGTTTGATGCAAG 59.139 43.478 10.71 0.00 43.26 4.01
7707 8890 3.257873 ACCATCCAAATCGTTTGATGCAA 59.742 39.130 10.71 0.00 43.26 4.08
7708 8891 2.824936 ACCATCCAAATCGTTTGATGCA 59.175 40.909 10.71 0.00 43.26 3.96
7709 8892 3.438360 GACCATCCAAATCGTTTGATGC 58.562 45.455 10.71 0.00 43.26 3.91
7710 8893 3.443329 TGGACCATCCAAATCGTTTGATG 59.557 43.478 10.71 6.01 45.00 3.07
7711 8894 3.696045 TGGACCATCCAAATCGTTTGAT 58.304 40.909 10.71 0.00 45.00 2.57
7712 8895 3.147553 TGGACCATCCAAATCGTTTGA 57.852 42.857 10.71 0.00 45.00 2.69
7744 8927 0.179056 AAATGGTCCGTGCCCTATCG 60.179 55.000 0.00 0.00 0.00 2.92
7750 8933 1.463674 ATCTGAAAATGGTCCGTGCC 58.536 50.000 0.00 0.00 0.00 5.01
7784 8967 5.818857 ACAGCTTTTACTAAAGGACAACGAA 59.181 36.000 0.00 0.00 40.90 3.85
7790 8973 5.995897 TGAAGGACAGCTTTTACTAAAGGAC 59.004 40.000 0.00 0.00 40.90 3.85
7805 8988 1.746470 TGCTGCATCATGAAGGACAG 58.254 50.000 0.00 6.40 0.00 3.51
7826 9009 8.854979 TCATTTTACAGTTCAAGATGTTTGTG 57.145 30.769 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.