Multiple sequence alignment - TraesCS4A01G257800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G257800 chr4A 100.000 4490 0 0 1 4490 570481540 570477051 0.000000e+00 8292.0
1 TraesCS4A01G257800 chr4A 94.872 39 1 1 31 68 486120356 486120318 4.850000e-05 60.2
2 TraesCS4A01G257800 chr4D 93.557 1816 68 9 1892 3702 32220366 32222137 0.000000e+00 2660.0
3 TraesCS4A01G257800 chr4D 89.197 1768 144 28 156 1899 32218682 32220426 0.000000e+00 2163.0
4 TraesCS4A01G257800 chr4D 88.764 89 10 0 70 158 501331779 501331691 4.750000e-20 110.0
5 TraesCS4A01G257800 chr4D 84.946 93 14 0 1001 1093 405321655 405321747 1.330000e-15 95.3
6 TraesCS4A01G257800 chr4D 100.000 34 0 0 3895 3928 32222335 32222368 3.750000e-06 63.9
7 TraesCS4A01G257800 chr4D 86.154 65 2 1 3976 4040 32222390 32222447 3.750000e-06 63.9
8 TraesCS4A01G257800 chr4D 94.872 39 2 0 30 68 420944895 420944857 1.350000e-05 62.1
9 TraesCS4A01G257800 chr4B 96.002 1626 56 5 1892 3514 46608066 46609685 0.000000e+00 2634.0
10 TraesCS4A01G257800 chr4B 88.683 1670 120 24 144 1775 46606293 46607931 0.000000e+00 1973.0
11 TraesCS4A01G257800 chr4B 91.878 197 13 1 1706 1899 46607931 46608127 5.720000e-69 272.0
12 TraesCS4A01G257800 chr4B 79.087 416 41 21 3545 3943 46609679 46610065 1.250000e-60 244.0
13 TraesCS4A01G257800 chr4B 79.443 287 38 12 3977 4244 46610062 46610346 2.760000e-42 183.0
14 TraesCS4A01G257800 chr1B 88.662 1861 163 36 1935 3791 594138950 594140766 0.000000e+00 2224.0
15 TraesCS4A01G257800 chr1B 77.905 611 66 42 751 1342 594138009 594138569 2.610000e-82 316.0
16 TraesCS4A01G257800 chr1B 94.872 39 2 0 30 68 26655240 26655202 1.350000e-05 62.1
17 TraesCS4A01G257800 chr1D 89.568 1783 137 36 1935 3711 438369284 438371023 0.000000e+00 2217.0
18 TraesCS4A01G257800 chr1D 78.383 569 74 33 790 1342 438368364 438368899 1.560000e-84 324.0
19 TraesCS4A01G257800 chr1A 89.132 1785 144 36 1935 3710 535062939 535064682 0.000000e+00 2176.0
20 TraesCS4A01G257800 chr1A 76.823 617 76 43 751 1342 535061999 535062573 7.350000e-73 285.0
21 TraesCS4A01G257800 chr1A 87.629 97 11 1 67 162 522970092 522969996 1.320000e-20 111.0
22 TraesCS4A01G257800 chr5A 88.387 620 72 0 2829 3448 598519358 598519977 0.000000e+00 747.0
23 TraesCS4A01G257800 chr5A 92.632 95 7 0 1001 1095 598517836 598517930 2.180000e-28 137.0
24 TraesCS4A01G257800 chr5B 86.883 648 85 0 2829 3476 587601351 587601998 0.000000e+00 726.0
25 TraesCS4A01G257800 chr5B 92.632 95 7 0 1001 1095 587599856 587599950 2.180000e-28 137.0
26 TraesCS4A01G257800 chr5D 86.595 649 85 2 2829 3476 479878741 479879388 0.000000e+00 715.0
27 TraesCS4A01G257800 chr5D 92.632 95 7 0 1001 1095 479877248 479877342 2.180000e-28 137.0
28 TraesCS4A01G257800 chr5D 93.827 81 5 0 78 158 232418808 232418888 6.100000e-24 122.0
29 TraesCS4A01G257800 chr2D 82.812 320 53 2 2855 3173 154182155 154181837 7.350000e-73 285.0
30 TraesCS4A01G257800 chr2D 91.250 80 7 0 78 157 540546315 540546394 4.750000e-20 110.0
31 TraesCS4A01G257800 chr2D 100.000 31 0 0 38 68 166150778 166150748 1.740000e-04 58.4
32 TraesCS4A01G257800 chr2A 95.098 102 5 0 2063 2164 94389020 94388919 1.290000e-35 161.0
33 TraesCS4A01G257800 chr6B 94.118 102 6 0 2063 2164 302277662 302277763 6.010000e-34 156.0
34 TraesCS4A01G257800 chr3B 94.118 102 6 0 2063 2164 8671898 8671999 6.010000e-34 156.0
35 TraesCS4A01G257800 chr6A 93.137 102 7 0 2063 2164 463742020 463742121 2.800000e-32 150.0
36 TraesCS4A01G257800 chr6D 91.358 81 7 0 78 158 455718021 455718101 1.320000e-20 111.0
37 TraesCS4A01G257800 chr6D 90.361 83 8 0 78 160 283850982 283850900 4.750000e-20 110.0
38 TraesCS4A01G257800 chr6D 90.361 83 8 0 78 160 377642967 377642885 4.750000e-20 110.0
39 TraesCS4A01G257800 chr7D 93.333 75 4 1 87 160 350100548 350100474 4.750000e-20 110.0
40 TraesCS4A01G257800 chr3D 86.957 92 12 0 66 157 326955158 326955249 2.210000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G257800 chr4A 570477051 570481540 4489 True 8292.0 8292 100.0000 1 4490 1 chr4A.!!$R2 4489
1 TraesCS4A01G257800 chr4D 32218682 32222447 3765 False 1237.7 2660 92.2270 156 4040 4 chr4D.!!$F2 3884
2 TraesCS4A01G257800 chr4B 46606293 46610346 4053 False 1061.2 2634 87.0186 144 4244 5 chr4B.!!$F1 4100
3 TraesCS4A01G257800 chr1B 594138009 594140766 2757 False 1270.0 2224 83.2835 751 3791 2 chr1B.!!$F1 3040
4 TraesCS4A01G257800 chr1D 438368364 438371023 2659 False 1270.5 2217 83.9755 790 3711 2 chr1D.!!$F1 2921
5 TraesCS4A01G257800 chr1A 535061999 535064682 2683 False 1230.5 2176 82.9775 751 3710 2 chr1A.!!$F1 2959
6 TraesCS4A01G257800 chr5A 598517836 598519977 2141 False 442.0 747 90.5095 1001 3448 2 chr5A.!!$F1 2447
7 TraesCS4A01G257800 chr5B 587599856 587601998 2142 False 431.5 726 89.7575 1001 3476 2 chr5B.!!$F1 2475
8 TraesCS4A01G257800 chr5D 479877248 479879388 2140 False 426.0 715 89.6135 1001 3476 2 chr5D.!!$F2 2475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
709 738 0.246635 ACGGTACATGACAGGCTGAC 59.753 55.0 23.66 16.47 0.00 3.51 F
1300 1381 0.468226 TGCTTCTGTTGGTCTCGGTT 59.532 50.0 0.00 0.00 0.00 4.44 F
1782 1980 0.036010 ATCCTCGCTGGTGTTTCTGG 60.036 55.0 0.00 0.00 37.07 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1768 1966 1.808411 ACATACCAGAAACACCAGCG 58.192 50.000 0.00 0.0 0.00 5.18 R
2815 3465 1.541588 GACCTGCAGATTGGTTGTTCC 59.458 52.381 17.39 0.0 36.59 3.62 R
3688 4344 1.014352 GCTATGGGTGTAGGCAAACG 58.986 55.000 0.00 0.0 0.00 3.60 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.616237 ATGAAATCCTCTTTCCTGCAAAAT 57.384 33.333 0.00 0.00 0.00 1.82
24 25 7.722949 ATGAAATCCTCTTTCCTGCAAAATA 57.277 32.000 0.00 0.00 0.00 1.40
25 26 7.537596 TGAAATCCTCTTTCCTGCAAAATAA 57.462 32.000 0.00 0.00 0.00 1.40
26 27 7.961351 TGAAATCCTCTTTCCTGCAAAATAAA 58.039 30.769 0.00 0.00 0.00 1.40
27 28 8.596293 TGAAATCCTCTTTCCTGCAAAATAAAT 58.404 29.630 0.00 0.00 0.00 1.40
52 53 9.825972 ATAAATAAATAATACGCACACTCATGC 57.174 29.630 0.00 0.00 42.48 4.06
59 60 3.786955 GCACACTCATGCGTATTCG 57.213 52.632 0.00 0.00 35.50 3.34
60 61 1.277326 GCACACTCATGCGTATTCGA 58.723 50.000 0.00 0.00 39.71 3.71
61 62 1.256376 GCACACTCATGCGTATTCGAG 59.744 52.381 0.00 0.23 39.71 4.04
62 63 2.797491 CACACTCATGCGTATTCGAGA 58.203 47.619 7.66 0.00 39.71 4.04
63 64 2.786027 CACACTCATGCGTATTCGAGAG 59.214 50.000 7.66 3.03 39.71 3.20
64 65 2.683362 ACACTCATGCGTATTCGAGAGA 59.317 45.455 13.27 0.20 39.71 3.10
81 82 7.825331 TCGAGAGAAAACATATACATCCTCT 57.175 36.000 0.00 0.00 37.03 3.69
82 83 8.919777 TCGAGAGAAAACATATACATCCTCTA 57.080 34.615 0.00 0.00 37.03 2.43
83 84 9.521841 TCGAGAGAAAACATATACATCCTCTAT 57.478 33.333 0.00 0.00 37.03 1.98
84 85 9.781834 CGAGAGAAAACATATACATCCTCTATC 57.218 37.037 0.00 0.00 30.79 2.08
119 120 8.658499 AAGAACGTTTTTGACATTAGACTAGT 57.342 30.769 0.46 0.00 0.00 2.57
120 121 8.658499 AGAACGTTTTTGACATTAGACTAGTT 57.342 30.769 0.46 0.00 0.00 2.24
121 122 9.106070 AGAACGTTTTTGACATTAGACTAGTTT 57.894 29.630 0.46 0.00 0.00 2.66
151 152 6.819284 ACGTTTTTATATTATGGGACGGAGA 58.181 36.000 0.00 0.00 33.95 3.71
152 153 6.927381 ACGTTTTTATATTATGGGACGGAGAG 59.073 38.462 0.00 0.00 33.95 3.20
159 160 2.830651 ATGGGACGGAGAGAGTACTT 57.169 50.000 0.00 0.00 0.00 2.24
164 165 2.434428 GACGGAGAGAGTACTTGTCCA 58.566 52.381 15.59 0.00 32.40 4.02
224 225 2.169789 CCGCAGAAGATCCACGCAG 61.170 63.158 0.00 0.00 0.00 5.18
228 229 2.510238 GAAGATCCACGCAGCGCT 60.510 61.111 16.61 2.64 0.00 5.92
252 253 4.649705 TGGTTCTCCCGCTCCCCA 62.650 66.667 0.00 0.00 35.15 4.96
269 270 5.107104 GCTCCCCAATTTCAAAAATCGAAAC 60.107 40.000 0.00 0.00 35.31 2.78
271 272 7.291411 TCCCCAATTTCAAAAATCGAAACTA 57.709 32.000 0.00 0.00 35.31 2.24
333 334 1.377229 GGAACCGTCCATCCAACCA 59.623 57.895 0.00 0.00 44.26 3.67
334 335 0.958876 GGAACCGTCCATCCAACCAC 60.959 60.000 0.00 0.00 44.26 4.16
337 338 2.045340 CGTCCATCCAACCACCCC 60.045 66.667 0.00 0.00 0.00 4.95
362 365 3.917760 CCGGACGGCTCATCTCCC 61.918 72.222 0.00 0.00 0.00 4.30
480 500 4.462280 CCCCCGCTACCAACCGAC 62.462 72.222 0.00 0.00 0.00 4.79
529 554 3.451178 TCTCTTACTACATCAACCCAGCC 59.549 47.826 0.00 0.00 0.00 4.85
533 558 0.469917 CTACATCAACCCAGCCCGAT 59.530 55.000 0.00 0.00 0.00 4.18
587 612 2.343758 CTGGACCCACACGTCAGG 59.656 66.667 0.00 0.00 34.24 3.86
614 643 0.249657 CAGGCGGGTAATCTCTCTGC 60.250 60.000 0.00 0.00 0.00 4.26
675 704 0.394899 CACCAAGCCCCCTCAGATTC 60.395 60.000 0.00 0.00 0.00 2.52
684 713 3.812167 GCCCCCTCAGATTCCACATATTC 60.812 52.174 0.00 0.00 0.00 1.75
709 738 0.246635 ACGGTACATGACAGGCTGAC 59.753 55.000 23.66 16.47 0.00 3.51
733 762 2.975799 CAACCACCCGACCGTTGG 60.976 66.667 0.00 0.00 34.55 3.77
748 777 2.961893 TTGGCCGGCACCGAGTAAT 61.962 57.895 30.85 0.00 42.83 1.89
932 973 2.930562 AGCTTTGGCCTCCGTCCT 60.931 61.111 3.32 0.00 39.73 3.85
934 975 2.269241 CTTTGGCCTCCGTCCTCC 59.731 66.667 3.32 0.00 0.00 4.30
1097 1139 1.312815 GAGCATGGCATTCAGGTACC 58.687 55.000 2.73 2.73 0.00 3.34
1101 1145 2.575532 CATGGCATTCAGGTACCGATT 58.424 47.619 6.18 1.13 0.00 3.34
1115 1163 2.186903 GATTCGCTCGCTTCCCCA 59.813 61.111 0.00 0.00 0.00 4.96
1137 1185 2.099062 GTTCTGCCATGCTTCGCG 59.901 61.111 0.00 0.00 0.00 5.87
1156 1208 1.466024 CGTTAGATCCGCGCTAGATCC 60.466 57.143 25.11 14.16 40.92 3.36
1166 1218 1.749033 GCTAGATCCGGGGGTTCTG 59.251 63.158 0.00 0.00 34.14 3.02
1194 1260 4.814294 GGCGTGCTCGGTCGGATT 62.814 66.667 10.52 0.00 37.56 3.01
1195 1261 2.813908 GCGTGCTCGGTCGGATTT 60.814 61.111 10.52 0.00 37.56 2.17
1196 1262 3.081133 CGTGCTCGGTCGGATTTG 58.919 61.111 0.00 0.00 0.00 2.32
1277 1356 0.908910 ACGGAATGTAGGGTGCATGA 59.091 50.000 0.00 0.00 0.00 3.07
1296 1377 2.147150 GAGGTTGCTTCTGTTGGTCTC 58.853 52.381 0.00 0.00 0.00 3.36
1297 1378 0.868406 GGTTGCTTCTGTTGGTCTCG 59.132 55.000 0.00 0.00 0.00 4.04
1298 1379 0.868406 GTTGCTTCTGTTGGTCTCGG 59.132 55.000 0.00 0.00 0.00 4.63
1300 1381 0.468226 TGCTTCTGTTGGTCTCGGTT 59.532 50.000 0.00 0.00 0.00 4.44
1303 1384 0.468226 TTCTGTTGGTCTCGGTTGCT 59.532 50.000 0.00 0.00 0.00 3.91
1305 1386 0.868406 CTGTTGGTCTCGGTTGCTTC 59.132 55.000 0.00 0.00 0.00 3.86
1307 1388 1.959226 TTGGTCTCGGTTGCTTCGC 60.959 57.895 0.00 0.00 0.00 4.70
1437 1528 1.875514 GTGCTGCAGTTCACTTGATCA 59.124 47.619 16.64 0.00 0.00 2.92
1439 1530 1.875514 GCTGCAGTTCACTTGATCACA 59.124 47.619 16.64 0.00 0.00 3.58
1518 1614 4.991153 TGTGGTAGATCTGATCAGTGTC 57.009 45.455 21.92 19.34 0.00 3.67
1536 1633 7.453393 TCAGTGTCCTCTAAATTGAACTCATT 58.547 34.615 0.00 0.00 0.00 2.57
1582 1681 8.811017 AGAATGTAGATATTGTAGAGGGACATG 58.189 37.037 0.00 0.00 0.00 3.21
1590 1689 3.248024 TGTAGAGGGACATGACCTGTTT 58.752 45.455 16.50 6.58 38.54 2.83
1591 1690 2.867109 AGAGGGACATGACCTGTTTG 57.133 50.000 16.50 0.00 38.54 2.93
1619 1746 2.334838 ACTTGTTACATTCGACGCTCC 58.665 47.619 0.00 0.00 0.00 4.70
1659 1786 8.918658 CATTATTATTATGTTGCAAGCATCACC 58.081 33.333 14.94 0.00 0.00 4.02
1696 1825 4.638421 TCGTTTGTTTGAAATGTCCTGTCT 59.362 37.500 0.00 0.00 0.00 3.41
1753 1951 5.213891 ACGGTGATATCTGTTCATGCATA 57.786 39.130 0.00 0.00 0.00 3.14
1759 1957 6.367149 GTGATATCTGTTCATGCATATCGTGT 59.633 38.462 0.00 0.00 32.85 4.49
1768 1966 7.545615 TGTTCATGCATATCGTGTTATATCCTC 59.454 37.037 0.00 0.00 33.44 3.71
1776 1974 2.223735 CGTGTTATATCCTCGCTGGTGT 60.224 50.000 0.00 0.00 37.07 4.16
1782 1980 0.036010 ATCCTCGCTGGTGTTTCTGG 60.036 55.000 0.00 0.00 37.07 3.86
1783 1981 1.071471 CCTCGCTGGTGTTTCTGGT 59.929 57.895 0.00 0.00 0.00 4.00
1814 2012 2.288030 GCCTGCTCATATGGAAATGCAC 60.288 50.000 2.13 0.00 0.00 4.57
1880 2081 6.815641 TGTAATGCAAACTGTTTTGTGAATGT 59.184 30.769 2.41 0.00 43.62 2.71
1884 2085 6.597614 TGCAAACTGTTTTGTGAATGTTTTC 58.402 32.000 2.41 0.00 43.62 2.29
1885 2086 6.426328 TGCAAACTGTTTTGTGAATGTTTTCT 59.574 30.769 2.41 0.00 43.62 2.52
1886 2087 7.041508 TGCAAACTGTTTTGTGAATGTTTTCTT 60.042 29.630 2.41 0.00 43.62 2.52
1888 2089 7.961325 AACTGTTTTGTGAATGTTTTCTTGT 57.039 28.000 0.00 0.00 32.78 3.16
1891 2092 7.872483 ACTGTTTTGTGAATGTTTTCTTGTTCT 59.128 29.630 0.00 0.00 32.78 3.01
1892 2093 8.016497 TGTTTTGTGAATGTTTTCTTGTTCTG 57.984 30.769 0.00 0.00 32.78 3.02
1893 2094 7.655328 TGTTTTGTGAATGTTTTCTTGTTCTGT 59.345 29.630 0.00 0.00 32.78 3.41
1894 2095 8.495148 GTTTTGTGAATGTTTTCTTGTTCTGTT 58.505 29.630 0.00 0.00 32.78 3.16
1895 2096 7.579589 TTGTGAATGTTTTCTTGTTCTGTTG 57.420 32.000 0.00 0.00 32.78 3.33
1896 2097 5.576384 TGTGAATGTTTTCTTGTTCTGTTGC 59.424 36.000 0.00 0.00 32.78 4.17
1897 2098 5.807011 GTGAATGTTTTCTTGTTCTGTTGCT 59.193 36.000 0.00 0.00 32.78 3.91
1898 2099 6.972328 GTGAATGTTTTCTTGTTCTGTTGCTA 59.028 34.615 0.00 0.00 32.78 3.49
1899 2100 7.649306 GTGAATGTTTTCTTGTTCTGTTGCTAT 59.351 33.333 0.00 0.00 32.78 2.97
1900 2101 7.648908 TGAATGTTTTCTTGTTCTGTTGCTATG 59.351 33.333 0.00 0.00 32.78 2.23
1901 2102 6.691754 TGTTTTCTTGTTCTGTTGCTATGA 57.308 33.333 0.00 0.00 0.00 2.15
1902 2103 7.094508 TGTTTTCTTGTTCTGTTGCTATGAA 57.905 32.000 0.00 0.00 0.00 2.57
1903 2104 7.715657 TGTTTTCTTGTTCTGTTGCTATGAAT 58.284 30.769 0.00 0.00 0.00 2.57
1904 2105 8.196771 TGTTTTCTTGTTCTGTTGCTATGAATT 58.803 29.630 0.00 0.00 0.00 2.17
1905 2106 8.694394 GTTTTCTTGTTCTGTTGCTATGAATTC 58.306 33.333 0.00 0.00 0.00 2.17
1906 2107 7.509141 TTCTTGTTCTGTTGCTATGAATTCA 57.491 32.000 11.26 11.26 0.00 2.57
1907 2108 7.692460 TCTTGTTCTGTTGCTATGAATTCAT 57.308 32.000 23.75 23.75 40.22 2.57
1908 2109 7.755591 TCTTGTTCTGTTGCTATGAATTCATC 58.244 34.615 23.95 11.71 37.76 2.92
1909 2110 7.609146 TCTTGTTCTGTTGCTATGAATTCATCT 59.391 33.333 23.95 5.47 37.76 2.90
1910 2111 7.080353 TGTTCTGTTGCTATGAATTCATCTG 57.920 36.000 23.95 17.98 37.76 2.90
1911 2112 6.656270 TGTTCTGTTGCTATGAATTCATCTGT 59.344 34.615 23.95 4.31 37.76 3.41
1912 2113 7.823799 TGTTCTGTTGCTATGAATTCATCTGTA 59.176 33.333 23.95 14.51 37.76 2.74
1913 2114 8.668353 GTTCTGTTGCTATGAATTCATCTGTAA 58.332 33.333 23.95 18.82 37.76 2.41
1914 2115 8.969260 TCTGTTGCTATGAATTCATCTGTAAT 57.031 30.769 23.95 2.39 37.76 1.89
1915 2116 9.399797 TCTGTTGCTATGAATTCATCTGTAATT 57.600 29.630 23.95 1.62 37.76 1.40
1916 2117 9.661187 CTGTTGCTATGAATTCATCTGTAATTC 57.339 33.333 23.95 12.61 41.60 2.17
1960 2371 6.072112 TCCTGTTCTGTTGCTACAAAATTC 57.928 37.500 1.93 0.00 32.92 2.17
1980 2391 7.786178 AATTCAGTATATTTAGCTTCGCACA 57.214 32.000 0.00 0.00 0.00 4.57
2263 2833 0.393077 AGTAAGTGCCGTGCTTGTCT 59.607 50.000 0.00 0.00 0.00 3.41
2700 3296 3.430453 CCCAACATACACCAACCTCAAT 58.570 45.455 0.00 0.00 0.00 2.57
2742 3387 3.264450 AGCCCTGTTTCTGCTTAGTACAT 59.736 43.478 0.00 0.00 29.17 2.29
2743 3388 3.375299 GCCCTGTTTCTGCTTAGTACATG 59.625 47.826 0.00 0.00 0.00 3.21
2785 3434 9.866798 ATGTATGATATATGTTGCACTGTCTAG 57.133 33.333 0.00 0.00 0.00 2.43
2815 3465 8.795513 TGTTATATTGGGATCTAATGCATTGTG 58.204 33.333 22.27 14.04 0.00 3.33
2898 3548 7.514784 TCTGAATGTTGATGTGAATGAGTTT 57.485 32.000 0.00 0.00 0.00 2.66
3060 3710 3.256960 AAGTGTGACCCCCGCCAT 61.257 61.111 0.00 0.00 0.00 4.40
3333 3983 1.174783 AGTTCGACCTGATGTACGCT 58.825 50.000 0.00 0.00 0.00 5.07
3381 4031 2.367512 GAGGGCATGGAGGAGGGT 60.368 66.667 0.00 0.00 0.00 4.34
3495 4145 3.203263 AGGGTGATGAGTACTAGAGCAGA 59.797 47.826 0.00 0.00 0.00 4.26
3539 4190 1.135489 CAAGCGTGCCTTCGTCTACTA 60.135 52.381 0.00 0.00 0.00 1.82
3558 4209 2.180946 ACTATCCTGTGATCTGCCCA 57.819 50.000 0.00 0.00 32.18 5.36
3561 4212 0.106819 ATCCTGTGATCTGCCCAAGC 60.107 55.000 0.00 0.00 40.48 4.01
3580 4231 1.202076 GCGGCTTTATCTGTTGTCTGC 60.202 52.381 0.00 0.00 0.00 4.26
3639 4295 3.882888 ACCTGTTGTGTTGTATGAACCTG 59.117 43.478 0.00 0.00 0.00 4.00
3640 4296 3.882888 CCTGTTGTGTTGTATGAACCTGT 59.117 43.478 0.00 0.00 0.00 4.00
3641 4297 4.261155 CCTGTTGTGTTGTATGAACCTGTG 60.261 45.833 0.00 0.00 0.00 3.66
3688 4344 6.488006 ACCTTGGTCAATATGCATGTTATCTC 59.512 38.462 10.16 0.79 0.00 2.75
3702 4358 2.934553 GTTATCTCGTTTGCCTACACCC 59.065 50.000 0.00 0.00 0.00 4.61
3712 4368 0.394565 GCCTACACCCATAGCCTCTG 59.605 60.000 0.00 0.00 0.00 3.35
3746 4402 5.253330 TCACCATTTCCCTGTTTCAGTATC 58.747 41.667 0.00 0.00 0.00 2.24
3749 4405 4.096984 CCATTTCCCTGTTTCAGTATCTGC 59.903 45.833 0.00 0.00 0.00 4.26
3779 4436 2.370349 TCGTGTGATTTGGTTGGTGTT 58.630 42.857 0.00 0.00 0.00 3.32
3791 4448 0.687920 TTGGTGTTGTCGCCTGGATA 59.312 50.000 0.00 0.00 43.94 2.59
3799 4457 0.038159 GTCGCCTGGATAATCCCTCG 60.038 60.000 0.00 0.00 35.03 4.63
3818 4476 6.532657 TCCCTCGTTTATATTGTTTCTTCGTC 59.467 38.462 0.00 0.00 0.00 4.20
3819 4477 6.534079 CCCTCGTTTATATTGTTTCTTCGTCT 59.466 38.462 0.00 0.00 0.00 4.18
3820 4478 7.064253 CCCTCGTTTATATTGTTTCTTCGTCTT 59.936 37.037 0.00 0.00 0.00 3.01
3821 4479 7.898309 CCTCGTTTATATTGTTTCTTCGTCTTG 59.102 37.037 0.00 0.00 0.00 3.02
3822 4480 8.301730 TCGTTTATATTGTTTCTTCGTCTTGT 57.698 30.769 0.00 0.00 0.00 3.16
3823 4481 8.218441 TCGTTTATATTGTTTCTTCGTCTTGTG 58.782 33.333 0.00 0.00 0.00 3.33
3824 4482 8.007716 CGTTTATATTGTTTCTTCGTCTTGTGT 58.992 33.333 0.00 0.00 0.00 3.72
3825 4483 9.314501 GTTTATATTGTTTCTTCGTCTTGTGTC 57.685 33.333 0.00 0.00 0.00 3.67
3839 4497 0.613572 TGTGTCGTGCCTCCCTGATA 60.614 55.000 0.00 0.00 0.00 2.15
3841 4499 1.040646 TGTCGTGCCTCCCTGATATC 58.959 55.000 0.00 0.00 0.00 1.63
3847 4505 1.055040 GCCTCCCTGATATCTGCTGT 58.945 55.000 3.98 0.00 0.00 4.40
3849 4507 2.233431 GCCTCCCTGATATCTGCTGTAG 59.767 54.545 3.98 0.00 0.00 2.74
3850 4508 2.233431 CCTCCCTGATATCTGCTGTAGC 59.767 54.545 3.98 0.00 42.50 3.58
3851 4509 3.164268 CTCCCTGATATCTGCTGTAGCT 58.836 50.000 3.98 0.00 42.66 3.32
3852 4510 3.577848 CTCCCTGATATCTGCTGTAGCTT 59.422 47.826 3.98 0.00 42.66 3.74
3853 4511 3.576118 TCCCTGATATCTGCTGTAGCTTC 59.424 47.826 3.98 0.00 42.66 3.86
3855 4513 3.577848 CCTGATATCTGCTGTAGCTTCCT 59.422 47.826 3.98 0.00 42.66 3.36
3857 4515 5.207110 TGATATCTGCTGTAGCTTCCTTC 57.793 43.478 3.98 0.00 42.66 3.46
3868 4582 1.349357 AGCTTCCTTCCCAGTCAAGTC 59.651 52.381 0.00 0.00 0.00 3.01
3875 4589 1.218316 CCCAGTCAAGTCCTACGCC 59.782 63.158 0.00 0.00 0.00 5.68
3884 4598 2.993899 CAAGTCCTACGCCTGTAACAAG 59.006 50.000 0.00 0.00 0.00 3.16
3929 4643 0.252421 AGTCCCTGCATCTGGTCTGA 60.252 55.000 0.00 0.00 0.00 3.27
3930 4644 0.615331 GTCCCTGCATCTGGTCTGAA 59.385 55.000 0.00 0.00 0.00 3.02
3931 4645 0.615331 TCCCTGCATCTGGTCTGAAC 59.385 55.000 0.00 0.00 0.00 3.18
3932 4646 0.617413 CCCTGCATCTGGTCTGAACT 59.383 55.000 0.00 0.00 0.00 3.01
3934 4648 2.237143 CCCTGCATCTGGTCTGAACTAA 59.763 50.000 0.00 0.00 0.00 2.24
3935 4649 3.529533 CCTGCATCTGGTCTGAACTAAG 58.470 50.000 0.00 0.00 0.00 2.18
3937 4651 4.180057 CTGCATCTGGTCTGAACTAAGTC 58.820 47.826 0.00 0.00 0.00 3.01
3939 4653 4.081972 TGCATCTGGTCTGAACTAAGTCTC 60.082 45.833 0.00 0.00 0.00 3.36
3941 4655 4.114015 TCTGGTCTGAACTAAGTCTCCA 57.886 45.455 0.00 0.00 0.00 3.86
3942 4656 4.480115 TCTGGTCTGAACTAAGTCTCCAA 58.520 43.478 0.00 0.00 0.00 3.53
3944 4658 3.964688 TGGTCTGAACTAAGTCTCCAACA 59.035 43.478 0.00 0.00 0.00 3.33
3945 4659 4.407621 TGGTCTGAACTAAGTCTCCAACAA 59.592 41.667 0.00 0.00 0.00 2.83
3947 4661 5.820947 GGTCTGAACTAAGTCTCCAACAAAA 59.179 40.000 0.00 0.00 0.00 2.44
3948 4662 6.017852 GGTCTGAACTAAGTCTCCAACAAAAG 60.018 42.308 0.00 0.00 0.00 2.27
3949 4663 6.539103 GTCTGAACTAAGTCTCCAACAAAAGT 59.461 38.462 0.00 0.00 0.00 2.66
3950 4664 7.065923 GTCTGAACTAAGTCTCCAACAAAAGTT 59.934 37.037 0.00 0.00 32.39 2.66
3951 4665 7.610305 TCTGAACTAAGTCTCCAACAAAAGTTT 59.390 33.333 0.00 0.00 30.88 2.66
3952 4666 7.535139 TGAACTAAGTCTCCAACAAAAGTTTG 58.465 34.615 2.22 2.22 43.62 2.93
3953 4667 5.891451 ACTAAGTCTCCAACAAAAGTTTGC 58.109 37.500 3.68 0.00 41.79 3.68
3954 4668 3.420839 AGTCTCCAACAAAAGTTTGCG 57.579 42.857 3.68 0.00 41.79 4.85
3955 4669 2.752903 AGTCTCCAACAAAAGTTTGCGT 59.247 40.909 3.68 0.00 41.79 5.24
3956 4670 3.942748 AGTCTCCAACAAAAGTTTGCGTA 59.057 39.130 3.68 0.00 41.79 4.42
3957 4671 4.035208 AGTCTCCAACAAAAGTTTGCGTAG 59.965 41.667 3.68 0.00 41.79 3.51
3958 4672 4.034742 GTCTCCAACAAAAGTTTGCGTAGA 59.965 41.667 3.68 0.45 41.79 2.59
3959 4673 4.636648 TCTCCAACAAAAGTTTGCGTAGAA 59.363 37.500 3.68 0.00 41.79 2.10
3960 4674 4.664188 TCCAACAAAAGTTTGCGTAGAAC 58.336 39.130 3.68 0.00 41.79 3.01
3961 4675 3.794564 CCAACAAAAGTTTGCGTAGAACC 59.205 43.478 3.68 0.00 41.79 3.62
3962 4676 4.439563 CCAACAAAAGTTTGCGTAGAACCT 60.440 41.667 3.68 0.00 41.79 3.50
3963 4677 4.547406 ACAAAAGTTTGCGTAGAACCTC 57.453 40.909 3.68 0.00 41.79 3.85
3964 4678 4.196971 ACAAAAGTTTGCGTAGAACCTCT 58.803 39.130 3.68 0.00 41.79 3.69
3965 4679 4.035208 ACAAAAGTTTGCGTAGAACCTCTG 59.965 41.667 3.68 0.00 41.79 3.35
3966 4680 3.746045 AAGTTTGCGTAGAACCTCTGA 57.254 42.857 0.00 0.00 0.00 3.27
3967 4681 3.963428 AGTTTGCGTAGAACCTCTGAT 57.037 42.857 0.00 0.00 0.00 2.90
3968 4682 4.273148 AGTTTGCGTAGAACCTCTGATT 57.727 40.909 0.00 0.00 0.00 2.57
3969 4683 3.997021 AGTTTGCGTAGAACCTCTGATTG 59.003 43.478 0.00 0.00 0.00 2.67
3970 4684 2.672961 TGCGTAGAACCTCTGATTGG 57.327 50.000 0.00 0.00 0.00 3.16
3971 4685 1.291132 GCGTAGAACCTCTGATTGGC 58.709 55.000 0.00 0.00 0.00 4.52
3972 4686 1.405526 GCGTAGAACCTCTGATTGGCA 60.406 52.381 0.00 0.00 0.00 4.92
3973 4687 2.271800 CGTAGAACCTCTGATTGGCAC 58.728 52.381 0.00 0.00 0.00 5.01
3974 4688 2.633488 GTAGAACCTCTGATTGGCACC 58.367 52.381 0.00 0.00 0.00 5.01
4005 4719 0.533755 CATCGTCCCATCTCCAAGCC 60.534 60.000 0.00 0.00 0.00 4.35
4024 4738 3.144506 GCCTATACGTCTAGTGCCTGTA 58.855 50.000 7.15 0.00 0.00 2.74
4042 4756 1.227556 AGCTTTCGCTGTCGGTTGT 60.228 52.632 0.00 0.00 46.86 3.32
4044 4758 1.076332 GCTTTCGCTGTCGGTTGTAT 58.924 50.000 0.00 0.00 36.13 2.29
4045 4759 1.201921 GCTTTCGCTGTCGGTTGTATG 60.202 52.381 0.00 0.00 36.13 2.39
4046 4760 1.393539 CTTTCGCTGTCGGTTGTATGG 59.606 52.381 0.00 0.00 36.13 2.74
4048 4762 0.389296 TCGCTGTCGGTTGTATGGTG 60.389 55.000 0.00 0.00 36.13 4.17
4049 4763 0.389296 CGCTGTCGGTTGTATGGTGA 60.389 55.000 0.00 0.00 0.00 4.02
4050 4764 1.739035 CGCTGTCGGTTGTATGGTGAT 60.739 52.381 0.00 0.00 0.00 3.06
4051 4765 2.480587 CGCTGTCGGTTGTATGGTGATA 60.481 50.000 0.00 0.00 0.00 2.15
4053 4767 4.557895 CGCTGTCGGTTGTATGGTGATATA 60.558 45.833 0.00 0.00 0.00 0.86
4054 4768 4.684703 GCTGTCGGTTGTATGGTGATATAC 59.315 45.833 0.00 0.00 34.78 1.47
4080 4794 4.256920 TGACCTATTGCTTTCTCTCTTGC 58.743 43.478 0.00 0.00 0.00 4.01
4117 4856 2.820330 CCTGAAACATGTGCCGTTTTT 58.180 42.857 0.00 0.00 36.72 1.94
4120 4859 2.428890 TGAAACATGTGCCGTTTTTCCT 59.571 40.909 0.00 0.00 36.72 3.36
4121 4860 2.507339 AACATGTGCCGTTTTTCCTG 57.493 45.000 0.00 0.00 0.00 3.86
4122 4861 0.673437 ACATGTGCCGTTTTTCCTGG 59.327 50.000 0.00 0.00 0.00 4.45
4123 4862 0.673437 CATGTGCCGTTTTTCCTGGT 59.327 50.000 0.00 0.00 0.00 4.00
4124 4863 1.068434 CATGTGCCGTTTTTCCTGGTT 59.932 47.619 0.00 0.00 0.00 3.67
4125 4864 0.457851 TGTGCCGTTTTTCCTGGTTG 59.542 50.000 0.00 0.00 0.00 3.77
4126 4865 0.874175 GTGCCGTTTTTCCTGGTTGC 60.874 55.000 0.00 0.00 0.00 4.17
4127 4866 1.040339 TGCCGTTTTTCCTGGTTGCT 61.040 50.000 0.00 0.00 0.00 3.91
4128 4867 0.104120 GCCGTTTTTCCTGGTTGCTT 59.896 50.000 0.00 0.00 0.00 3.91
4129 4868 1.338655 GCCGTTTTTCCTGGTTGCTTA 59.661 47.619 0.00 0.00 0.00 3.09
4130 4869 2.607038 GCCGTTTTTCCTGGTTGCTTAG 60.607 50.000 0.00 0.00 0.00 2.18
4131 4870 2.621526 CCGTTTTTCCTGGTTGCTTAGT 59.378 45.455 0.00 0.00 0.00 2.24
4136 4875 4.647424 TTTCCTGGTTGCTTAGTTGTTG 57.353 40.909 0.00 0.00 0.00 3.33
4156 4895 3.833732 TGTCAAGTACTGAGACTGACCT 58.166 45.455 22.15 0.00 33.60 3.85
4159 4898 2.494073 CAAGTACTGAGACTGACCTCCC 59.506 54.545 0.00 0.00 32.32 4.30
4160 4899 1.711375 AGTACTGAGACTGACCTCCCA 59.289 52.381 0.00 0.00 32.32 4.37
4161 4900 2.313342 AGTACTGAGACTGACCTCCCAT 59.687 50.000 0.00 0.00 32.32 4.00
4162 4901 3.528078 AGTACTGAGACTGACCTCCCATA 59.472 47.826 0.00 0.00 32.32 2.74
4164 4903 3.791320 ACTGAGACTGACCTCCCATAAA 58.209 45.455 0.00 0.00 32.32 1.40
4165 4904 3.772025 ACTGAGACTGACCTCCCATAAAG 59.228 47.826 0.00 0.00 32.32 1.85
4193 4935 1.269621 ACCACTCTTCTTTCACGTCCG 60.270 52.381 0.00 0.00 0.00 4.79
4208 4950 0.992802 GTCCGTGCATTTCTCGAGAC 59.007 55.000 16.36 4.02 33.89 3.36
4214 4956 0.806492 GCATTTCTCGAGACCCCGAC 60.806 60.000 16.36 0.00 34.56 4.79
4244 4986 4.067896 AGAAATATCAAAGATGCCGCGAT 58.932 39.130 8.23 0.00 0.00 4.58
4245 4987 3.818961 AATATCAAAGATGCCGCGATG 57.181 42.857 8.23 0.00 0.00 3.84
4246 4988 0.867746 TATCAAAGATGCCGCGATGC 59.132 50.000 8.23 3.39 0.00 3.91
4247 4989 1.789078 ATCAAAGATGCCGCGATGCC 61.789 55.000 8.23 0.00 0.00 4.40
4248 4990 3.211963 AAAGATGCCGCGATGCCC 61.212 61.111 8.23 0.00 0.00 5.36
4249 4991 3.704231 AAAGATGCCGCGATGCCCT 62.704 57.895 8.23 0.25 0.00 5.19
4250 4992 2.324014 AAAGATGCCGCGATGCCCTA 62.324 55.000 8.23 0.00 0.00 3.53
4251 4993 2.046892 GATGCCGCGATGCCCTAT 60.047 61.111 8.23 0.00 0.00 2.57
4252 4994 1.672356 GATGCCGCGATGCCCTATT 60.672 57.895 8.23 0.00 0.00 1.73
4253 4995 1.639298 GATGCCGCGATGCCCTATTC 61.639 60.000 8.23 0.00 0.00 1.75
4254 4996 2.031163 GCCGCGATGCCCTATTCT 59.969 61.111 8.23 0.00 0.00 2.40
4255 4997 1.598130 GCCGCGATGCCCTATTCTT 60.598 57.895 8.23 0.00 0.00 2.52
4256 4998 1.569479 GCCGCGATGCCCTATTCTTC 61.569 60.000 8.23 0.00 0.00 2.87
4257 4999 0.951040 CCGCGATGCCCTATTCTTCC 60.951 60.000 8.23 0.00 0.00 3.46
4258 5000 0.249868 CGCGATGCCCTATTCTTCCA 60.250 55.000 0.00 0.00 0.00 3.53
4259 5001 1.609061 CGCGATGCCCTATTCTTCCAT 60.609 52.381 0.00 0.00 0.00 3.41
4260 5002 2.079925 GCGATGCCCTATTCTTCCATC 58.920 52.381 0.00 0.00 0.00 3.51
4261 5003 2.550855 GCGATGCCCTATTCTTCCATCA 60.551 50.000 0.00 0.00 33.65 3.07
4262 5004 3.070018 CGATGCCCTATTCTTCCATCAC 58.930 50.000 0.00 0.00 33.65 3.06
4263 5005 2.620251 TGCCCTATTCTTCCATCACG 57.380 50.000 0.00 0.00 0.00 4.35
4264 5006 1.837439 TGCCCTATTCTTCCATCACGT 59.163 47.619 0.00 0.00 0.00 4.49
4265 5007 2.158957 TGCCCTATTCTTCCATCACGTC 60.159 50.000 0.00 0.00 0.00 4.34
4266 5008 2.743938 CCCTATTCTTCCATCACGTCG 58.256 52.381 0.00 0.00 0.00 5.12
4267 5009 2.128035 CCTATTCTTCCATCACGTCGC 58.872 52.381 0.00 0.00 0.00 5.19
4268 5010 1.781429 CTATTCTTCCATCACGTCGCG 59.219 52.381 0.00 0.00 0.00 5.87
4269 5011 0.108804 ATTCTTCCATCACGTCGCGT 60.109 50.000 5.77 0.00 42.36 6.01
4283 5025 3.788766 GCGTGCTTGCGGAATCGT 61.789 61.111 0.00 0.00 38.89 3.73
4284 5026 2.096406 CGTGCTTGCGGAATCGTG 59.904 61.111 0.00 0.00 38.89 4.35
4285 5027 2.379634 CGTGCTTGCGGAATCGTGA 61.380 57.895 0.00 0.00 38.89 4.35
4286 5028 1.421485 GTGCTTGCGGAATCGTGAG 59.579 57.895 0.00 0.00 38.89 3.51
4287 5029 2.390599 TGCTTGCGGAATCGTGAGC 61.391 57.895 0.00 0.00 42.38 4.26
4288 5030 2.390599 GCTTGCGGAATCGTGAGCA 61.391 57.895 0.00 0.00 41.98 4.26
4289 5031 1.421485 CTTGCGGAATCGTGAGCAC 59.579 57.895 0.00 0.00 39.51 4.40
4290 5032 1.970917 CTTGCGGAATCGTGAGCACC 61.971 60.000 0.00 0.00 39.51 5.01
4291 5033 2.434185 GCGGAATCGTGAGCACCA 60.434 61.111 0.00 0.00 38.89 4.17
4292 5034 2.456119 GCGGAATCGTGAGCACCAG 61.456 63.158 0.00 0.00 38.89 4.00
4293 5035 2.456119 CGGAATCGTGAGCACCAGC 61.456 63.158 0.00 0.00 42.56 4.85
4294 5036 1.375908 GGAATCGTGAGCACCAGCA 60.376 57.895 0.00 0.00 45.49 4.41
4295 5037 0.955428 GGAATCGTGAGCACCAGCAA 60.955 55.000 0.00 0.00 45.49 3.91
4296 5038 0.874390 GAATCGTGAGCACCAGCAAA 59.126 50.000 0.00 0.00 45.49 3.68
4297 5039 0.593128 AATCGTGAGCACCAGCAAAC 59.407 50.000 0.00 0.00 45.49 2.93
4298 5040 0.250467 ATCGTGAGCACCAGCAAACT 60.250 50.000 0.00 0.00 45.49 2.66
4299 5041 0.463654 TCGTGAGCACCAGCAAACTT 60.464 50.000 0.00 0.00 45.49 2.66
4300 5042 0.317269 CGTGAGCACCAGCAAACTTG 60.317 55.000 0.00 0.00 45.49 3.16
4316 5058 4.600012 AACTTGCCGATCAATACTTTCG 57.400 40.909 0.00 0.00 33.57 3.46
4320 5062 1.948104 CCGATCAATACTTTCGGCCA 58.052 50.000 2.24 0.00 45.04 5.36
4321 5063 2.494059 CCGATCAATACTTTCGGCCAT 58.506 47.619 2.24 0.00 45.04 4.40
4322 5064 2.224079 CCGATCAATACTTTCGGCCATG 59.776 50.000 2.24 0.00 45.04 3.66
4323 5065 2.224079 CGATCAATACTTTCGGCCATGG 59.776 50.000 7.63 7.63 0.00 3.66
4324 5066 3.476552 GATCAATACTTTCGGCCATGGA 58.523 45.455 18.40 0.00 0.00 3.41
4325 5067 2.639065 TCAATACTTTCGGCCATGGAC 58.361 47.619 18.40 13.35 0.00 4.02
4326 5068 1.676006 CAATACTTTCGGCCATGGACC 59.324 52.381 18.40 15.42 0.00 4.46
4327 5069 0.916086 ATACTTTCGGCCATGGACCA 59.084 50.000 18.40 0.00 0.00 4.02
4328 5070 0.693622 TACTTTCGGCCATGGACCAA 59.306 50.000 18.40 4.08 0.00 3.67
4329 5071 0.039618 ACTTTCGGCCATGGACCAAT 59.960 50.000 18.40 0.00 0.00 3.16
4330 5072 1.283613 ACTTTCGGCCATGGACCAATA 59.716 47.619 18.40 2.07 0.00 1.90
4331 5073 2.091885 ACTTTCGGCCATGGACCAATAT 60.092 45.455 18.40 0.00 0.00 1.28
4332 5074 2.270352 TTCGGCCATGGACCAATATC 57.730 50.000 18.40 0.00 0.00 1.63
4333 5075 0.400213 TCGGCCATGGACCAATATCC 59.600 55.000 18.40 2.98 39.45 2.59
4334 5076 0.609131 CGGCCATGGACCAATATCCC 60.609 60.000 18.40 2.16 38.06 3.85
4335 5077 0.779997 GGCCATGGACCAATATCCCT 59.220 55.000 18.40 0.00 38.06 4.20
4336 5078 1.548582 GGCCATGGACCAATATCCCTG 60.549 57.143 18.40 0.00 38.06 4.45
4337 5079 1.915141 CCATGGACCAATATCCCTGC 58.085 55.000 5.56 0.00 38.06 4.85
4338 5080 1.145531 CCATGGACCAATATCCCTGCA 59.854 52.381 5.56 0.00 38.06 4.41
4339 5081 2.511659 CATGGACCAATATCCCTGCAG 58.488 52.381 6.78 6.78 38.06 4.41
4340 5082 0.846015 TGGACCAATATCCCTGCAGG 59.154 55.000 26.87 26.87 38.06 4.85
4341 5083 0.538287 GGACCAATATCCCTGCAGGC 60.538 60.000 28.39 9.96 34.51 4.85
4342 5084 0.183492 GACCAATATCCCTGCAGGCA 59.817 55.000 28.39 14.72 34.51 4.75
4343 5085 0.184451 ACCAATATCCCTGCAGGCAG 59.816 55.000 28.39 15.11 43.26 4.85
4344 5086 1.177256 CCAATATCCCTGCAGGCAGC 61.177 60.000 28.39 0.00 42.35 5.25
4345 5087 1.152368 AATATCCCTGCAGGCAGCC 59.848 57.895 28.39 1.84 44.83 4.85
4346 5088 1.358830 AATATCCCTGCAGGCAGCCT 61.359 55.000 28.39 8.70 44.83 4.58
4347 5089 1.776975 ATATCCCTGCAGGCAGCCTC 61.777 60.000 28.39 7.49 44.83 4.70
4348 5090 2.903871 TATCCCTGCAGGCAGCCTCT 62.904 60.000 28.39 0.00 44.83 3.69
4349 5091 4.044439 CCCTGCAGGCAGCCTCTT 62.044 66.667 28.39 0.00 44.83 2.85
4350 5092 2.750637 CCTGCAGGCAGCCTCTTG 60.751 66.667 22.33 2.21 44.83 3.02
4351 5093 2.033757 CTGCAGGCAGCCTCTTGT 59.966 61.111 12.53 0.00 44.83 3.16
4352 5094 2.281970 TGCAGGCAGCCTCTTGTG 60.282 61.111 12.53 1.31 44.83 3.33
4353 5095 2.033141 GCAGGCAGCCTCTTGTGA 59.967 61.111 12.53 0.00 37.23 3.58
4354 5096 1.601759 GCAGGCAGCCTCTTGTGAA 60.602 57.895 12.53 0.00 37.23 3.18
4355 5097 1.584380 GCAGGCAGCCTCTTGTGAAG 61.584 60.000 12.53 0.00 37.23 3.02
4356 5098 0.959372 CAGGCAGCCTCTTGTGAAGG 60.959 60.000 12.53 0.00 0.00 3.46
4357 5099 1.073897 GGCAGCCTCTTGTGAAGGT 59.926 57.895 3.29 0.00 0.00 3.50
4358 5100 0.538287 GGCAGCCTCTTGTGAAGGTT 60.538 55.000 3.29 0.00 0.00 3.50
4359 5101 0.877743 GCAGCCTCTTGTGAAGGTTC 59.122 55.000 0.00 0.00 0.00 3.62
4360 5102 1.815408 GCAGCCTCTTGTGAAGGTTCA 60.815 52.381 0.00 0.00 34.20 3.18
4369 5111 3.131326 TGAAGGTTCACATACGGCG 57.869 52.632 4.80 4.80 31.01 6.46
4370 5112 1.017177 TGAAGGTTCACATACGGCGC 61.017 55.000 6.90 0.00 31.01 6.53
4371 5113 1.004320 AAGGTTCACATACGGCGCA 60.004 52.632 10.83 0.00 0.00 6.09
4372 5114 0.392461 AAGGTTCACATACGGCGCAT 60.392 50.000 10.83 0.00 0.00 4.73
4373 5115 0.810031 AGGTTCACATACGGCGCATC 60.810 55.000 10.83 0.00 0.00 3.91
4374 5116 1.087202 GGTTCACATACGGCGCATCA 61.087 55.000 10.83 0.00 0.00 3.07
4375 5117 0.301687 GTTCACATACGGCGCATCAG 59.698 55.000 10.83 0.00 0.00 2.90
4376 5118 1.428370 TTCACATACGGCGCATCAGC 61.428 55.000 10.83 0.00 37.42 4.26
4387 5129 1.351012 GCATCAGCGATCAGTGTGC 59.649 57.895 0.00 0.00 0.00 4.57
4388 5130 2.012237 CATCAGCGATCAGTGTGCC 58.988 57.895 0.00 0.00 0.00 5.01
4389 5131 1.520120 ATCAGCGATCAGTGTGCCG 60.520 57.895 0.00 0.00 0.00 5.69
4390 5132 3.857854 CAGCGATCAGTGTGCCGC 61.858 66.667 14.99 14.99 47.00 6.53
4392 5134 3.857854 GCGATCAGTGTGCCGCAG 61.858 66.667 16.88 0.00 46.04 5.18
4393 5135 3.857854 CGATCAGTGTGCCGCAGC 61.858 66.667 0.00 0.00 40.48 5.25
4402 5144 3.577229 TGCCGCAGCACATTAGTG 58.423 55.556 0.00 0.00 46.52 2.74
4403 5145 1.302431 TGCCGCAGCACATTAGTGT 60.302 52.632 0.00 0.00 46.52 3.55
4404 5146 0.888736 TGCCGCAGCACATTAGTGTT 60.889 50.000 0.00 0.00 46.52 3.32
4405 5147 2.420607 TGCCGCAGCACATTAGTGTTT 61.421 47.619 0.00 0.00 46.52 2.83
4406 5148 4.265436 TGCCGCAGCACATTAGTGTTTC 62.265 50.000 0.00 0.00 46.52 2.78
4417 5159 7.462109 CACATTAGTGTTTCTATGAGAGCTC 57.538 40.000 5.27 5.27 40.92 4.09
4418 5160 6.478344 CACATTAGTGTTTCTATGAGAGCTCC 59.522 42.308 10.93 2.40 40.92 4.70
4419 5161 6.155221 ACATTAGTGTTTCTATGAGAGCTCCA 59.845 38.462 10.93 8.78 34.01 3.86
4420 5162 4.464069 AGTGTTTCTATGAGAGCTCCAC 57.536 45.455 10.93 7.94 0.00 4.02
4421 5163 3.196685 AGTGTTTCTATGAGAGCTCCACC 59.803 47.826 10.93 0.37 0.00 4.61
4422 5164 2.501723 TGTTTCTATGAGAGCTCCACCC 59.498 50.000 10.93 0.00 0.00 4.61
4423 5165 2.501723 GTTTCTATGAGAGCTCCACCCA 59.498 50.000 10.93 4.11 0.00 4.51
4424 5166 2.079170 TCTATGAGAGCTCCACCCAG 57.921 55.000 10.93 6.96 0.00 4.45
4425 5167 1.047002 CTATGAGAGCTCCACCCAGG 58.953 60.000 10.93 0.00 39.47 4.45
4426 5168 1.050988 TATGAGAGCTCCACCCAGGC 61.051 60.000 10.93 0.00 37.29 4.85
4427 5169 2.686835 GAGAGCTCCACCCAGGCT 60.687 66.667 10.93 0.00 39.16 4.58
4428 5170 1.381872 GAGAGCTCCACCCAGGCTA 60.382 63.158 10.93 0.00 36.37 3.93
4429 5171 1.382420 AGAGCTCCACCCAGGCTAG 60.382 63.158 10.93 0.00 36.37 3.42
4430 5172 1.687493 GAGCTCCACCCAGGCTAGT 60.687 63.158 0.87 0.00 36.37 2.57
4431 5173 0.397254 GAGCTCCACCCAGGCTAGTA 60.397 60.000 0.87 0.00 36.37 1.82
4432 5174 0.266152 AGCTCCACCCAGGCTAGTAT 59.734 55.000 0.00 0.00 37.29 2.12
4433 5175 1.132500 GCTCCACCCAGGCTAGTATT 58.868 55.000 0.00 0.00 37.29 1.89
4434 5176 1.202698 GCTCCACCCAGGCTAGTATTG 60.203 57.143 0.00 0.00 37.29 1.90
4435 5177 2.119495 CTCCACCCAGGCTAGTATTGT 58.881 52.381 0.00 0.00 37.29 2.71
4436 5178 3.305720 CTCCACCCAGGCTAGTATTGTA 58.694 50.000 0.00 0.00 37.29 2.41
4437 5179 3.904339 CTCCACCCAGGCTAGTATTGTAT 59.096 47.826 0.00 0.00 37.29 2.29
4438 5180 4.303794 TCCACCCAGGCTAGTATTGTATT 58.696 43.478 0.00 0.00 37.29 1.89
4439 5181 4.347000 TCCACCCAGGCTAGTATTGTATTC 59.653 45.833 0.00 0.00 37.29 1.75
4440 5182 4.505039 CCACCCAGGCTAGTATTGTATTCC 60.505 50.000 0.00 0.00 0.00 3.01
4441 5183 3.651423 ACCCAGGCTAGTATTGTATTCCC 59.349 47.826 0.00 0.00 0.00 3.97
4442 5184 3.650942 CCCAGGCTAGTATTGTATTCCCA 59.349 47.826 0.00 0.00 0.00 4.37
4443 5185 4.505039 CCCAGGCTAGTATTGTATTCCCAC 60.505 50.000 0.00 0.00 0.00 4.61
4444 5186 4.307432 CAGGCTAGTATTGTATTCCCACG 58.693 47.826 0.00 0.00 0.00 4.94
4445 5187 3.323979 AGGCTAGTATTGTATTCCCACGG 59.676 47.826 0.00 0.00 0.00 4.94
4446 5188 3.070590 GGCTAGTATTGTATTCCCACGGT 59.929 47.826 0.00 0.00 0.00 4.83
4447 5189 4.443881 GGCTAGTATTGTATTCCCACGGTT 60.444 45.833 0.00 0.00 0.00 4.44
4448 5190 5.121105 GCTAGTATTGTATTCCCACGGTTT 58.879 41.667 0.00 0.00 0.00 3.27
4449 5191 5.007332 GCTAGTATTGTATTCCCACGGTTTG 59.993 44.000 0.00 0.00 0.00 2.93
4450 5192 4.913784 AGTATTGTATTCCCACGGTTTGT 58.086 39.130 0.00 0.00 0.00 2.83
4451 5193 4.939439 AGTATTGTATTCCCACGGTTTGTC 59.061 41.667 0.00 0.00 0.00 3.18
4452 5194 2.188062 TGTATTCCCACGGTTTGTCC 57.812 50.000 0.00 0.00 0.00 4.02
4453 5195 1.271488 TGTATTCCCACGGTTTGTCCC 60.271 52.381 0.00 0.00 0.00 4.46
4454 5196 1.065647 TATTCCCACGGTTTGTCCCA 58.934 50.000 0.00 0.00 0.00 4.37
4455 5197 0.251165 ATTCCCACGGTTTGTCCCAG 60.251 55.000 0.00 0.00 0.00 4.45
4456 5198 2.969300 TTCCCACGGTTTGTCCCAGC 62.969 60.000 0.00 0.00 0.00 4.85
4457 5199 2.113139 CCACGGTTTGTCCCAGCT 59.887 61.111 0.00 0.00 0.00 4.24
4458 5200 1.373435 CCACGGTTTGTCCCAGCTA 59.627 57.895 0.00 0.00 0.00 3.32
4459 5201 0.035439 CCACGGTTTGTCCCAGCTAT 60.035 55.000 0.00 0.00 0.00 2.97
4460 5202 1.086696 CACGGTTTGTCCCAGCTATG 58.913 55.000 0.00 0.00 0.00 2.23
4462 5204 1.376609 CGGTTTGTCCCAGCTATGGC 61.377 60.000 0.00 0.00 46.19 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.616237 ATTTTGCAGGAAAGAGGATTTCAT 57.384 33.333 3.07 0.00 0.00 2.57
1 2 7.537596 TTATTTTGCAGGAAAGAGGATTTCA 57.462 32.000 3.07 0.00 0.00 2.69
26 27 9.825972 GCATGAGTGTGCGTATTATTTATTTAT 57.174 29.630 0.00 0.00 35.10 1.40
41 42 1.256376 CTCGAATACGCATGAGTGTGC 59.744 52.381 12.80 3.04 39.47 4.57
42 43 2.786027 CTCTCGAATACGCATGAGTGTG 59.214 50.000 12.80 0.00 39.22 3.82
43 44 2.683362 TCTCTCGAATACGCATGAGTGT 59.317 45.455 12.80 2.11 42.14 3.55
44 45 3.340337 TCTCTCGAATACGCATGAGTG 57.660 47.619 12.80 0.00 39.58 3.51
45 46 4.371855 TTTCTCTCGAATACGCATGAGT 57.628 40.909 7.41 7.41 39.58 3.41
46 47 4.562789 TGTTTTCTCTCGAATACGCATGAG 59.437 41.667 0.00 0.00 39.58 2.90
47 48 4.490743 TGTTTTCTCTCGAATACGCATGA 58.509 39.130 0.00 0.00 39.58 3.07
48 49 4.840401 TGTTTTCTCTCGAATACGCATG 57.160 40.909 0.00 0.00 39.58 4.06
49 50 7.865889 TGTATATGTTTTCTCTCGAATACGCAT 59.134 33.333 0.00 0.00 39.58 4.73
50 51 7.197703 TGTATATGTTTTCTCTCGAATACGCA 58.802 34.615 0.00 0.00 39.58 5.24
51 52 7.618964 TGTATATGTTTTCTCTCGAATACGC 57.381 36.000 0.00 0.00 39.58 4.42
52 53 8.851416 GGATGTATATGTTTTCTCTCGAATACG 58.149 37.037 0.00 0.00 34.90 3.06
53 54 9.915629 AGGATGTATATGTTTTCTCTCGAATAC 57.084 33.333 0.00 0.00 33.42 1.89
55 56 8.865090 AGAGGATGTATATGTTTTCTCTCGAAT 58.135 33.333 0.00 0.00 0.00 3.34
56 57 8.239038 AGAGGATGTATATGTTTTCTCTCGAA 57.761 34.615 0.00 0.00 0.00 3.71
57 58 7.825331 AGAGGATGTATATGTTTTCTCTCGA 57.175 36.000 0.00 0.00 0.00 4.04
58 59 9.781834 GATAGAGGATGTATATGTTTTCTCTCG 57.218 37.037 0.00 0.00 33.20 4.04
93 94 9.754382 ACTAGTCTAATGTCAAAAACGTTCTTA 57.246 29.630 0.00 0.00 38.14 2.10
94 95 8.658499 ACTAGTCTAATGTCAAAAACGTTCTT 57.342 30.769 0.00 0.00 38.14 2.52
95 96 8.658499 AACTAGTCTAATGTCAAAAACGTTCT 57.342 30.769 0.00 0.00 38.14 3.01
123 124 8.738106 TCCGTCCCATAATATAAAAACGTTTTT 58.262 29.630 33.94 33.94 42.51 1.94
124 125 8.278729 TCCGTCCCATAATATAAAAACGTTTT 57.721 30.769 20.26 20.26 0.00 2.43
125 126 7.769970 TCTCCGTCCCATAATATAAAAACGTTT 59.230 33.333 7.96 7.96 0.00 3.60
126 127 7.274447 TCTCCGTCCCATAATATAAAAACGTT 58.726 34.615 0.00 0.00 0.00 3.99
127 128 6.819284 TCTCCGTCCCATAATATAAAAACGT 58.181 36.000 0.00 0.00 0.00 3.99
128 129 7.149973 TCTCTCCGTCCCATAATATAAAAACG 58.850 38.462 0.00 0.00 0.00 3.60
129 130 8.148999 ACTCTCTCCGTCCCATAATATAAAAAC 58.851 37.037 0.00 0.00 0.00 2.43
130 131 8.258850 ACTCTCTCCGTCCCATAATATAAAAA 57.741 34.615 0.00 0.00 0.00 1.94
131 132 7.850935 ACTCTCTCCGTCCCATAATATAAAA 57.149 36.000 0.00 0.00 0.00 1.52
132 133 8.168725 AGTACTCTCTCCGTCCCATAATATAAA 58.831 37.037 0.00 0.00 0.00 1.40
133 134 7.696981 AGTACTCTCTCCGTCCCATAATATAA 58.303 38.462 0.00 0.00 0.00 0.98
134 135 7.268212 AGTACTCTCTCCGTCCCATAATATA 57.732 40.000 0.00 0.00 0.00 0.86
135 136 6.142259 AGTACTCTCTCCGTCCCATAATAT 57.858 41.667 0.00 0.00 0.00 1.28
136 137 5.579753 AGTACTCTCTCCGTCCCATAATA 57.420 43.478 0.00 0.00 0.00 0.98
137 138 4.456662 AGTACTCTCTCCGTCCCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
138 139 3.947612 AGTACTCTCTCCGTCCCATAA 57.052 47.619 0.00 0.00 0.00 1.90
139 140 3.053842 ACAAGTACTCTCTCCGTCCCATA 60.054 47.826 0.00 0.00 0.00 2.74
140 141 2.291670 ACAAGTACTCTCTCCGTCCCAT 60.292 50.000 0.00 0.00 0.00 4.00
141 142 1.075050 ACAAGTACTCTCTCCGTCCCA 59.925 52.381 0.00 0.00 0.00 4.37
142 143 1.744522 GACAAGTACTCTCTCCGTCCC 59.255 57.143 0.00 0.00 0.00 4.46
146 147 1.473278 GGTGGACAAGTACTCTCTCCG 59.527 57.143 0.00 0.00 0.00 4.63
151 152 0.966920 CCGTGGTGGACAAGTACTCT 59.033 55.000 0.00 0.00 42.00 3.24
152 153 0.669625 GCCGTGGTGGACAAGTACTC 60.670 60.000 0.00 0.00 42.00 2.59
228 229 4.367023 CGGGAGAACCAACGGCGA 62.367 66.667 16.62 0.00 40.22 5.54
232 233 2.434359 GGAGCGGGAGAACCAACG 60.434 66.667 0.00 0.00 40.22 4.10
236 237 2.211468 AATTGGGGAGCGGGAGAACC 62.211 60.000 0.00 0.00 0.00 3.62
269 270 1.139095 GTCGGGCAGGTTCGAGTAG 59.861 63.158 0.00 0.00 36.00 2.57
271 272 2.600769 AGTCGGGCAGGTTCGAGT 60.601 61.111 0.00 0.00 36.00 4.18
301 302 1.500396 GTTCCATTCCACCGTTCGC 59.500 57.895 0.00 0.00 0.00 4.70
428 448 1.248486 TCCTCGTTGGTGAGACTGAG 58.752 55.000 0.00 0.00 38.28 3.35
515 540 0.468226 GATCGGGCTGGGTTGATGTA 59.532 55.000 0.00 0.00 0.00 2.29
549 574 3.423162 TTTGTTGCTGGGCGTGTGC 62.423 57.895 0.00 0.00 41.71 4.57
557 582 1.463553 GGTCCAGGGTTTGTTGCTGG 61.464 60.000 0.00 0.00 36.59 4.85
596 621 1.403687 GGCAGAGAGATTACCCGCCT 61.404 60.000 0.00 0.00 35.17 5.52
599 624 0.830648 TTGGGCAGAGAGATTACCCG 59.169 55.000 0.00 0.00 44.00 5.28
614 643 2.223711 ACGCTTTTTGTTAGCACTTGGG 60.224 45.455 0.00 0.00 38.55 4.12
650 679 0.972471 GAGGGGGCTTGGTGGAATTG 60.972 60.000 0.00 0.00 0.00 2.32
675 704 3.000815 CCGTTCCGGGAATATGTGG 57.999 57.895 13.48 6.65 44.15 4.17
709 738 3.892162 TCGGGTGGTTGGGTTGGG 61.892 66.667 0.00 0.00 0.00 4.12
733 762 2.522638 CGAATTACTCGGTGCCGGC 61.523 63.158 22.73 22.73 44.20 6.13
932 973 3.846254 GATCGGGGGAGGAGGGGA 61.846 72.222 0.00 0.00 0.00 4.81
934 975 2.203714 GAGATCGGGGGAGGAGGG 60.204 72.222 0.00 0.00 0.00 4.30
1115 1163 0.886563 GAAGCATGGCAGAACAAGCT 59.113 50.000 0.00 0.00 46.17 3.74
1137 1185 1.466024 CGGATCTAGCGCGGATCTAAC 60.466 57.143 30.22 19.85 39.41 2.34
1156 1208 2.282180 CAACCACCAGAACCCCCG 60.282 66.667 0.00 0.00 0.00 5.73
1186 1252 2.886730 ATCCACGCCCAAATCCGACC 62.887 60.000 0.00 0.00 0.00 4.79
1187 1253 1.436983 GATCCACGCCCAAATCCGAC 61.437 60.000 0.00 0.00 0.00 4.79
1188 1254 1.153249 GATCCACGCCCAAATCCGA 60.153 57.895 0.00 0.00 0.00 4.55
1189 1255 1.153168 AGATCCACGCCCAAATCCG 60.153 57.895 0.00 0.00 0.00 4.18
1190 1256 0.107214 TCAGATCCACGCCCAAATCC 60.107 55.000 0.00 0.00 0.00 3.01
1191 1257 1.017387 GTCAGATCCACGCCCAAATC 58.983 55.000 0.00 0.00 0.00 2.17
1192 1258 0.620556 AGTCAGATCCACGCCCAAAT 59.379 50.000 0.00 0.00 0.00 2.32
1193 1259 0.321564 CAGTCAGATCCACGCCCAAA 60.322 55.000 0.00 0.00 0.00 3.28
1194 1260 1.296392 CAGTCAGATCCACGCCCAA 59.704 57.895 0.00 0.00 0.00 4.12
1195 1261 2.981302 CAGTCAGATCCACGCCCA 59.019 61.111 0.00 0.00 0.00 5.36
1196 1262 2.512515 GCAGTCAGATCCACGCCC 60.513 66.667 0.00 0.00 0.00 6.13
1277 1356 1.541233 CGAGACCAACAGAAGCAACCT 60.541 52.381 0.00 0.00 0.00 3.50
1303 1384 1.193650 CAAATTCGAACCGTCTGCGAA 59.806 47.619 0.00 0.00 46.31 4.70
1305 1386 0.787787 TCAAATTCGAACCGTCTGCG 59.212 50.000 0.00 0.00 37.95 5.18
1307 1388 6.523201 CCTAAAATTCAAATTCGAACCGTCTG 59.477 38.462 0.00 0.00 0.00 3.51
1437 1528 0.877071 CAGAATTGCAACCGCTCTGT 59.123 50.000 0.00 0.00 39.64 3.41
1439 1530 2.472695 TACAGAATTGCAACCGCTCT 57.527 45.000 0.00 0.00 39.64 4.09
1466 1557 0.817634 CACAACCCGAAGCAGGTGAA 60.818 55.000 0.00 0.00 37.78 3.18
1575 1674 3.012518 CAGATCAAACAGGTCATGTCCC 58.987 50.000 5.28 0.73 43.00 4.46
1582 1681 6.619801 AACAAGTAACAGATCAAACAGGTC 57.380 37.500 0.00 0.00 0.00 3.85
1590 1689 6.307077 CGTCGAATGTAACAAGTAACAGATCA 59.693 38.462 0.00 0.00 0.00 2.92
1591 1690 6.683883 CGTCGAATGTAACAAGTAACAGATC 58.316 40.000 0.00 0.00 0.00 2.75
1753 1951 2.891580 ACCAGCGAGGATATAACACGAT 59.108 45.455 5.19 0.00 41.22 3.73
1759 1957 4.442893 CCAGAAACACCAGCGAGGATATAA 60.443 45.833 5.19 0.00 41.22 0.98
1768 1966 1.808411 ACATACCAGAAACACCAGCG 58.192 50.000 0.00 0.00 0.00 5.18
1776 1974 3.694072 GCAGGCAATGTACATACCAGAAA 59.306 43.478 23.09 0.00 0.00 2.52
1782 1980 5.122869 CCATATGAGCAGGCAATGTACATAC 59.877 44.000 9.21 4.50 34.51 2.39
1783 1981 5.012975 TCCATATGAGCAGGCAATGTACATA 59.987 40.000 9.21 0.00 35.37 2.29
1880 2081 8.412456 TGAATTCATAGCAACAGAACAAGAAAA 58.588 29.630 3.38 0.00 0.00 2.29
1884 2085 7.696872 CAGATGAATTCATAGCAACAGAACAAG 59.303 37.037 20.75 0.00 36.57 3.16
1885 2086 7.175467 ACAGATGAATTCATAGCAACAGAACAA 59.825 33.333 20.75 0.00 36.57 2.83
1886 2087 6.656270 ACAGATGAATTCATAGCAACAGAACA 59.344 34.615 20.75 0.00 36.57 3.18
1888 2089 8.791327 TTACAGATGAATTCATAGCAACAGAA 57.209 30.769 20.75 5.25 36.57 3.02
1891 2092 9.176460 TGAATTACAGATGAATTCATAGCAACA 57.824 29.630 20.75 10.71 44.46 3.33
1903 2104 9.299963 CACAAAACAGTTTGAATTACAGATGAA 57.700 29.630 0.00 0.00 45.99 2.57
1904 2105 8.681806 TCACAAAACAGTTTGAATTACAGATGA 58.318 29.630 0.00 0.00 45.99 2.92
1905 2106 8.854979 TCACAAAACAGTTTGAATTACAGATG 57.145 30.769 0.00 0.00 45.99 2.90
1907 2108 9.299963 CATTCACAAAACAGTTTGAATTACAGA 57.700 29.630 8.42 0.00 45.99 3.41
1908 2109 9.086336 ACATTCACAAAACAGTTTGAATTACAG 57.914 29.630 8.42 2.50 45.99 2.74
1909 2110 8.994429 ACATTCACAAAACAGTTTGAATTACA 57.006 26.923 8.42 0.00 45.99 2.41
1912 2113 9.824534 GAAAACATTCACAAAACAGTTTGAATT 57.175 25.926 8.42 0.00 45.99 2.17
1913 2114 8.450180 GGAAAACATTCACAAAACAGTTTGAAT 58.550 29.630 0.00 2.73 45.99 2.57
1914 2115 7.659390 AGGAAAACATTCACAAAACAGTTTGAA 59.341 29.630 0.00 0.20 45.99 2.69
1915 2116 7.117523 CAGGAAAACATTCACAAAACAGTTTGA 59.882 33.333 0.00 0.00 45.99 2.69
1917 2118 6.934083 ACAGGAAAACATTCACAAAACAGTTT 59.066 30.769 0.00 0.00 0.00 2.66
1918 2119 6.463360 ACAGGAAAACATTCACAAAACAGTT 58.537 32.000 0.00 0.00 0.00 3.16
1980 2391 6.785466 ACAAGGGGGATTAAACAGTGTTAAAT 59.215 34.615 9.37 0.00 0.00 1.40
2291 2861 5.255687 TGATCAGCAACAGTGATAATTGGT 58.744 37.500 0.00 0.00 34.69 3.67
2418 3014 1.940613 ACAGCGTTGAAGACAAGGAAC 59.059 47.619 6.16 0.00 42.27 3.62
2700 3296 3.568853 GCTATACCTGAGAAACGAGCCTA 59.431 47.826 0.00 0.00 0.00 3.93
2785 3434 8.565896 TGCATTAGATCCCAATATAACATGAC 57.434 34.615 0.00 0.00 0.00 3.06
2815 3465 1.541588 GACCTGCAGATTGGTTGTTCC 59.458 52.381 17.39 0.00 36.59 3.62
2823 3473 3.139850 GGATGAGATGACCTGCAGATTG 58.860 50.000 17.39 0.15 0.00 2.67
3237 3887 4.785453 GCCCTCTGGACCTTGGCG 62.785 72.222 0.00 0.00 31.55 5.69
3333 3983 1.373748 GTGGACGAAGGCACGCTTA 60.374 57.895 0.00 0.00 36.70 3.09
3381 4031 1.228894 ACGGGCCTCAGAGAACTCA 60.229 57.895 0.84 0.00 0.00 3.41
3495 4145 2.479566 ACATCAGGTCGCAAACTCAT 57.520 45.000 0.00 0.00 0.00 2.90
3526 4177 4.023878 CACAGGATAGTAGTAGACGAAGGC 60.024 50.000 0.00 0.00 0.00 4.35
3539 4190 2.180946 TGGGCAGATCACAGGATAGT 57.819 50.000 0.00 0.00 32.67 2.12
3558 4209 2.744202 CAGACAACAGATAAAGCCGCTT 59.256 45.455 0.00 0.00 0.00 4.68
3561 4212 1.398390 GGCAGACAACAGATAAAGCCG 59.602 52.381 0.00 0.00 0.00 5.52
3580 4231 3.552699 CACACAGCAAACATTCAAACAGG 59.447 43.478 0.00 0.00 0.00 4.00
3632 4288 3.886505 GGTTCAAACATACCACAGGTTCA 59.113 43.478 0.00 0.00 37.09 3.18
3639 4295 3.364964 CGAAGCAGGTTCAAACATACCAC 60.365 47.826 12.77 0.00 36.87 4.16
3640 4296 2.811431 CGAAGCAGGTTCAAACATACCA 59.189 45.455 12.77 0.00 36.87 3.25
3641 4297 3.471495 CGAAGCAGGTTCAAACATACC 57.529 47.619 12.77 0.00 34.44 2.73
3688 4344 1.014352 GCTATGGGTGTAGGCAAACG 58.986 55.000 0.00 0.00 0.00 3.60
3717 4373 1.710244 ACAGGGAAATGGTGATGGACA 59.290 47.619 0.00 0.00 0.00 4.02
3718 4374 2.514458 ACAGGGAAATGGTGATGGAC 57.486 50.000 0.00 0.00 0.00 4.02
3722 4378 4.118168 ACTGAAACAGGGAAATGGTGAT 57.882 40.909 0.00 0.00 35.51 3.06
3746 4402 3.607422 TCACACGAAGAAACAATGCAG 57.393 42.857 0.00 0.00 0.00 4.41
3749 4405 5.280945 ACCAAATCACACGAAGAAACAATG 58.719 37.500 0.00 0.00 0.00 2.82
3779 4436 1.048601 GAGGGATTATCCAGGCGACA 58.951 55.000 13.78 0.00 38.64 4.35
3791 4448 7.551617 ACGAAGAAACAATATAAACGAGGGATT 59.448 33.333 0.00 0.00 0.00 3.01
3799 4457 9.314501 GACACAAGACGAAGAAACAATATAAAC 57.685 33.333 0.00 0.00 0.00 2.01
3818 4476 1.669115 CAGGGAGGCACGACACAAG 60.669 63.158 0.00 0.00 0.00 3.16
3819 4477 1.480212 ATCAGGGAGGCACGACACAA 61.480 55.000 0.00 0.00 0.00 3.33
3820 4478 0.613572 TATCAGGGAGGCACGACACA 60.614 55.000 0.00 0.00 0.00 3.72
3821 4479 0.753262 ATATCAGGGAGGCACGACAC 59.247 55.000 0.00 0.00 0.00 3.67
3822 4480 1.040646 GATATCAGGGAGGCACGACA 58.959 55.000 0.00 0.00 0.00 4.35
3823 4481 1.000283 CAGATATCAGGGAGGCACGAC 60.000 57.143 5.32 0.00 0.00 4.34
3824 4482 1.332195 CAGATATCAGGGAGGCACGA 58.668 55.000 5.32 0.00 0.00 4.35
3825 4483 0.320247 GCAGATATCAGGGAGGCACG 60.320 60.000 5.32 0.00 0.00 5.34
3839 4497 1.488393 GGGAAGGAAGCTACAGCAGAT 59.512 52.381 3.70 0.00 45.16 2.90
3841 4499 0.615331 TGGGAAGGAAGCTACAGCAG 59.385 55.000 3.70 0.00 45.16 4.24
3847 4505 2.567615 GACTTGACTGGGAAGGAAGCTA 59.432 50.000 0.00 0.00 0.00 3.32
3849 4507 1.611936 GGACTTGACTGGGAAGGAAGC 60.612 57.143 0.00 0.00 0.00 3.86
3850 4508 1.981495 AGGACTTGACTGGGAAGGAAG 59.019 52.381 0.00 0.00 0.00 3.46
3851 4509 2.118403 AGGACTTGACTGGGAAGGAA 57.882 50.000 0.00 0.00 0.00 3.36
3852 4510 2.537143 GTAGGACTTGACTGGGAAGGA 58.463 52.381 0.00 0.00 0.00 3.36
3853 4511 1.204941 CGTAGGACTTGACTGGGAAGG 59.795 57.143 0.00 0.00 0.00 3.46
3855 4513 0.606604 GCGTAGGACTTGACTGGGAA 59.393 55.000 0.00 0.00 0.00 3.97
3857 4515 1.218316 GGCGTAGGACTTGACTGGG 59.782 63.158 0.00 0.00 0.00 4.45
3868 4582 2.607187 CTCACTTGTTACAGGCGTAGG 58.393 52.381 0.00 0.00 0.00 3.18
3875 4589 3.059325 GCAGTTCAGCTCACTTGTTACAG 60.059 47.826 0.00 0.00 0.00 2.74
3884 4598 1.012841 GGCTATGCAGTTCAGCTCAC 58.987 55.000 10.90 0.00 35.60 3.51
3929 4643 6.330278 GCAAACTTTTGTTGGAGACTTAGTT 58.670 36.000 3.74 0.00 42.67 2.24
3930 4644 5.448632 CGCAAACTTTTGTTGGAGACTTAGT 60.449 40.000 3.74 0.00 42.67 2.24
3931 4645 4.970003 CGCAAACTTTTGTTGGAGACTTAG 59.030 41.667 3.74 0.00 42.67 2.18
3932 4646 4.396790 ACGCAAACTTTTGTTGGAGACTTA 59.603 37.500 3.74 0.00 42.67 2.24
3934 4648 2.752903 ACGCAAACTTTTGTTGGAGACT 59.247 40.909 3.74 0.00 42.67 3.24
3935 4649 3.145212 ACGCAAACTTTTGTTGGAGAC 57.855 42.857 3.74 0.00 42.67 3.36
3937 4651 4.545823 TCTACGCAAACTTTTGTTGGAG 57.454 40.909 3.74 3.48 42.67 3.86
3939 4653 3.794564 GGTTCTACGCAAACTTTTGTTGG 59.205 43.478 3.74 0.00 42.67 3.77
3941 4655 4.638865 AGAGGTTCTACGCAAACTTTTGTT 59.361 37.500 3.74 0.00 45.94 2.83
3942 4656 4.035208 CAGAGGTTCTACGCAAACTTTTGT 59.965 41.667 3.74 0.00 40.24 2.83
3944 4658 4.448210 TCAGAGGTTCTACGCAAACTTTT 58.552 39.130 0.00 0.00 0.00 2.27
3945 4659 4.067972 TCAGAGGTTCTACGCAAACTTT 57.932 40.909 0.00 0.00 0.00 2.66
3947 4661 3.963428 ATCAGAGGTTCTACGCAAACT 57.037 42.857 0.00 0.00 0.00 2.66
3948 4662 3.125316 CCAATCAGAGGTTCTACGCAAAC 59.875 47.826 0.00 0.00 0.00 2.93
3949 4663 3.334691 CCAATCAGAGGTTCTACGCAAA 58.665 45.455 0.00 0.00 0.00 3.68
3950 4664 2.935238 GCCAATCAGAGGTTCTACGCAA 60.935 50.000 0.00 0.00 0.00 4.85
3951 4665 1.405526 GCCAATCAGAGGTTCTACGCA 60.406 52.381 0.00 0.00 0.00 5.24
3952 4666 1.291132 GCCAATCAGAGGTTCTACGC 58.709 55.000 0.00 0.00 0.00 4.42
3953 4667 2.271800 GTGCCAATCAGAGGTTCTACG 58.728 52.381 0.00 0.00 0.00 3.51
3954 4668 2.027192 TGGTGCCAATCAGAGGTTCTAC 60.027 50.000 0.00 0.00 0.00 2.59
3955 4669 2.027192 GTGGTGCCAATCAGAGGTTCTA 60.027 50.000 0.00 0.00 0.00 2.10
3956 4670 1.067295 TGGTGCCAATCAGAGGTTCT 58.933 50.000 0.00 0.00 0.00 3.01
3957 4671 1.168714 GTGGTGCCAATCAGAGGTTC 58.831 55.000 0.00 0.00 0.00 3.62
3958 4672 0.251341 GGTGGTGCCAATCAGAGGTT 60.251 55.000 0.00 0.00 37.17 3.50
3959 4673 1.380302 GGTGGTGCCAATCAGAGGT 59.620 57.895 0.00 0.00 37.17 3.85
3960 4674 1.379916 TGGTGGTGCCAATCAGAGG 59.620 57.895 0.00 0.00 45.94 3.69
3969 4683 1.000274 GATGACTGTTTTGGTGGTGCC 60.000 52.381 0.00 0.00 37.90 5.01
3970 4684 1.334960 CGATGACTGTTTTGGTGGTGC 60.335 52.381 0.00 0.00 0.00 5.01
3971 4685 1.946768 ACGATGACTGTTTTGGTGGTG 59.053 47.619 0.00 0.00 0.00 4.17
3972 4686 2.218603 GACGATGACTGTTTTGGTGGT 58.781 47.619 0.00 0.00 0.00 4.16
3973 4687 1.535462 GGACGATGACTGTTTTGGTGG 59.465 52.381 0.00 0.00 0.00 4.61
3974 4688 1.535462 GGGACGATGACTGTTTTGGTG 59.465 52.381 0.00 0.00 0.00 4.17
4005 4719 4.066490 AGCTACAGGCACTAGACGTATAG 58.934 47.826 15.45 15.45 44.79 1.31
4046 4760 6.115448 AGCAATAGGTCAAGGGTATATCAC 57.885 41.667 0.00 0.00 0.00 3.06
4048 4762 7.454225 AGAAAGCAATAGGTCAAGGGTATATC 58.546 38.462 0.00 0.00 0.00 1.63
4049 4763 7.293535 AGAGAAAGCAATAGGTCAAGGGTATAT 59.706 37.037 0.00 0.00 0.00 0.86
4050 4764 6.615726 AGAGAAAGCAATAGGTCAAGGGTATA 59.384 38.462 0.00 0.00 0.00 1.47
4051 4765 5.430089 AGAGAAAGCAATAGGTCAAGGGTAT 59.570 40.000 0.00 0.00 0.00 2.73
4053 4767 3.589288 AGAGAAAGCAATAGGTCAAGGGT 59.411 43.478 0.00 0.00 0.00 4.34
4054 4768 4.080638 AGAGAGAAAGCAATAGGTCAAGGG 60.081 45.833 0.00 0.00 0.00 3.95
4056 4770 5.163774 GCAAGAGAGAAAGCAATAGGTCAAG 60.164 44.000 0.00 0.00 0.00 3.02
4057 4771 4.697352 GCAAGAGAGAAAGCAATAGGTCAA 59.303 41.667 0.00 0.00 0.00 3.18
4058 4772 4.256920 GCAAGAGAGAAAGCAATAGGTCA 58.743 43.478 0.00 0.00 0.00 4.02
4059 4773 3.308323 CGCAAGAGAGAAAGCAATAGGTC 59.692 47.826 0.00 0.00 43.02 3.85
4060 4774 3.265791 CGCAAGAGAGAAAGCAATAGGT 58.734 45.455 0.00 0.00 43.02 3.08
4062 4776 2.935201 AGCGCAAGAGAGAAAGCAATAG 59.065 45.455 11.47 0.00 43.02 1.73
4063 4777 2.977914 AGCGCAAGAGAGAAAGCAATA 58.022 42.857 11.47 0.00 43.02 1.90
4064 4778 1.818642 AGCGCAAGAGAGAAAGCAAT 58.181 45.000 11.47 0.00 43.02 3.56
4096 4810 0.031994 AAACGGCACATGTTTCAGGC 59.968 50.000 0.00 0.00 0.00 4.85
4117 4856 3.211045 GACAACAACTAAGCAACCAGGA 58.789 45.455 0.00 0.00 0.00 3.86
4120 4859 4.013728 ACTTGACAACAACTAAGCAACCA 58.986 39.130 0.00 0.00 32.27 3.67
4121 4860 4.632538 ACTTGACAACAACTAAGCAACC 57.367 40.909 0.00 0.00 32.27 3.77
4122 4861 6.036735 TCAGTACTTGACAACAACTAAGCAAC 59.963 38.462 0.00 0.00 32.27 4.17
4123 4862 6.110033 TCAGTACTTGACAACAACTAAGCAA 58.890 36.000 0.00 0.00 32.27 3.91
4124 4863 5.666462 TCAGTACTTGACAACAACTAAGCA 58.334 37.500 0.00 0.00 32.27 3.91
4125 4864 5.983720 TCTCAGTACTTGACAACAACTAAGC 59.016 40.000 0.00 0.00 32.27 3.09
4126 4865 7.168302 CAGTCTCAGTACTTGACAACAACTAAG 59.832 40.741 21.07 0.00 33.56 2.18
4127 4866 6.978659 CAGTCTCAGTACTTGACAACAACTAA 59.021 38.462 21.07 0.00 33.56 2.24
4128 4867 6.320418 TCAGTCTCAGTACTTGACAACAACTA 59.680 38.462 21.07 3.33 33.56 2.24
4129 4868 5.127194 TCAGTCTCAGTACTTGACAACAACT 59.873 40.000 21.07 4.39 33.56 3.16
4130 4869 5.232414 GTCAGTCTCAGTACTTGACAACAAC 59.768 44.000 21.07 12.50 32.49 3.32
4131 4870 5.348986 GTCAGTCTCAGTACTTGACAACAA 58.651 41.667 21.07 6.82 32.49 2.83
4136 4875 3.191791 GGAGGTCAGTCTCAGTACTTGAC 59.808 52.174 13.86 13.86 35.58 3.18
4156 4895 5.191722 AGAGTGGTAGAAATGCTTTATGGGA 59.808 40.000 0.00 0.00 0.00 4.37
4159 4898 7.856145 AGAAGAGTGGTAGAAATGCTTTATG 57.144 36.000 0.00 0.00 0.00 1.90
4160 4899 8.870075 AAAGAAGAGTGGTAGAAATGCTTTAT 57.130 30.769 0.00 0.00 0.00 1.40
4161 4900 7.936847 TGAAAGAAGAGTGGTAGAAATGCTTTA 59.063 33.333 0.00 0.00 0.00 1.85
4162 4901 6.772716 TGAAAGAAGAGTGGTAGAAATGCTTT 59.227 34.615 0.00 0.00 0.00 3.51
4164 4903 5.703130 GTGAAAGAAGAGTGGTAGAAATGCT 59.297 40.000 0.00 0.00 0.00 3.79
4165 4904 5.389935 CGTGAAAGAAGAGTGGTAGAAATGC 60.390 44.000 0.00 0.00 0.00 3.56
4193 4935 1.084370 CGGGGTCTCGAGAAATGCAC 61.084 60.000 18.55 5.50 0.00 4.57
4208 4950 2.770164 ATTTCTCTGAACTGTCGGGG 57.230 50.000 0.00 0.00 30.95 5.73
4214 4956 7.416022 GGCATCTTTGATATTTCTCTGAACTG 58.584 38.462 0.00 0.00 0.00 3.16
4244 4986 1.837439 ACGTGATGGAAGAATAGGGCA 59.163 47.619 0.00 0.00 0.00 5.36
4245 4987 2.484889 GACGTGATGGAAGAATAGGGC 58.515 52.381 0.00 0.00 0.00 5.19
4246 4988 2.743938 CGACGTGATGGAAGAATAGGG 58.256 52.381 0.00 0.00 0.00 3.53
4247 4989 2.128035 GCGACGTGATGGAAGAATAGG 58.872 52.381 0.00 0.00 0.00 2.57
4248 4990 1.781429 CGCGACGTGATGGAAGAATAG 59.219 52.381 0.00 0.00 0.00 1.73
4249 4991 1.133598 ACGCGACGTGATGGAAGAATA 59.866 47.619 15.93 0.00 39.18 1.75
4250 4992 0.108804 ACGCGACGTGATGGAAGAAT 60.109 50.000 15.93 0.00 39.18 2.40
4251 4993 1.287815 ACGCGACGTGATGGAAGAA 59.712 52.632 15.93 0.00 39.18 2.52
4252 4994 2.959372 ACGCGACGTGATGGAAGA 59.041 55.556 15.93 0.00 39.18 2.87
4266 5008 3.788766 ACGATTCCGCAAGCACGC 61.789 61.111 0.00 0.00 39.95 5.34
4267 5009 2.096406 CACGATTCCGCAAGCACG 59.904 61.111 0.00 0.00 39.95 5.34
4268 5010 1.421485 CTCACGATTCCGCAAGCAC 59.579 57.895 0.00 0.00 39.95 4.40
4269 5011 2.390599 GCTCACGATTCCGCAAGCA 61.391 57.895 0.00 0.00 42.55 3.91
4270 5012 2.390599 TGCTCACGATTCCGCAAGC 61.391 57.895 0.00 0.00 42.99 4.01
4271 5013 1.421485 GTGCTCACGATTCCGCAAG 59.579 57.895 0.00 0.00 39.95 4.01
4272 5014 2.032634 GGTGCTCACGATTCCGCAA 61.033 57.895 0.00 0.00 39.95 4.85
4273 5015 2.434185 GGTGCTCACGATTCCGCA 60.434 61.111 0.00 0.00 39.95 5.69
4274 5016 2.434185 TGGTGCTCACGATTCCGC 60.434 61.111 0.00 0.00 39.95 5.54
4275 5017 2.456119 GCTGGTGCTCACGATTCCG 61.456 63.158 0.00 0.00 37.79 4.30
4276 5018 0.955428 TTGCTGGTGCTCACGATTCC 60.955 55.000 0.00 0.00 40.48 3.01
4277 5019 0.874390 TTTGCTGGTGCTCACGATTC 59.126 50.000 0.00 0.00 40.48 2.52
4278 5020 0.593128 GTTTGCTGGTGCTCACGATT 59.407 50.000 0.00 0.00 40.48 3.34
4279 5021 0.250467 AGTTTGCTGGTGCTCACGAT 60.250 50.000 0.00 0.00 40.48 3.73
4280 5022 0.463654 AAGTTTGCTGGTGCTCACGA 60.464 50.000 0.00 0.00 40.48 4.35
4281 5023 0.317269 CAAGTTTGCTGGTGCTCACG 60.317 55.000 0.00 0.00 40.48 4.35
4282 5024 3.557207 CAAGTTTGCTGGTGCTCAC 57.443 52.632 0.00 0.00 40.48 3.51
4293 5035 4.788100 CGAAAGTATTGATCGGCAAGTTTG 59.212 41.667 0.00 0.00 40.42 2.93
4294 5036 4.969816 CGAAAGTATTGATCGGCAAGTTT 58.030 39.130 0.00 0.00 40.42 2.66
4295 5037 4.600012 CGAAAGTATTGATCGGCAAGTT 57.400 40.909 0.00 0.00 40.42 2.66
4302 5044 2.224079 CCATGGCCGAAAGTATTGATCG 59.776 50.000 0.00 0.00 36.39 3.69
4303 5045 3.251004 GTCCATGGCCGAAAGTATTGATC 59.749 47.826 6.96 0.00 0.00 2.92
4304 5046 3.214328 GTCCATGGCCGAAAGTATTGAT 58.786 45.455 6.96 0.00 0.00 2.57
4305 5047 2.639065 GTCCATGGCCGAAAGTATTGA 58.361 47.619 6.96 0.00 0.00 2.57
4306 5048 1.676006 GGTCCATGGCCGAAAGTATTG 59.324 52.381 6.96 0.00 0.00 1.90
4307 5049 1.283613 TGGTCCATGGCCGAAAGTATT 59.716 47.619 6.96 0.00 0.00 1.89
4308 5050 0.916086 TGGTCCATGGCCGAAAGTAT 59.084 50.000 6.96 0.00 0.00 2.12
4309 5051 0.693622 TTGGTCCATGGCCGAAAGTA 59.306 50.000 6.96 0.00 0.00 2.24
4310 5052 0.039618 ATTGGTCCATGGCCGAAAGT 59.960 50.000 16.32 1.50 0.00 2.66
4311 5053 2.051334 TATTGGTCCATGGCCGAAAG 57.949 50.000 16.32 0.00 0.00 2.62
4312 5054 2.582052 GATATTGGTCCATGGCCGAAA 58.418 47.619 16.32 9.03 0.00 3.46
4313 5055 1.202879 GGATATTGGTCCATGGCCGAA 60.203 52.381 16.32 5.99 38.20 4.30
4314 5056 0.400213 GGATATTGGTCCATGGCCGA 59.600 55.000 6.96 12.12 38.20 5.54
4315 5057 0.609131 GGGATATTGGTCCATGGCCG 60.609 60.000 6.96 0.00 40.17 6.13
4316 5058 0.779997 AGGGATATTGGTCCATGGCC 59.220 55.000 6.96 12.55 40.17 5.36
4317 5059 1.915141 CAGGGATATTGGTCCATGGC 58.085 55.000 6.96 1.78 44.23 4.40
4320 5062 1.426598 CCTGCAGGGATATTGGTCCAT 59.573 52.381 26.14 0.00 40.17 3.41
4321 5063 0.846015 CCTGCAGGGATATTGGTCCA 59.154 55.000 26.14 0.00 40.17 4.02
4322 5064 0.538287 GCCTGCAGGGATATTGGTCC 60.538 60.000 33.46 9.38 37.23 4.46
4323 5065 0.183492 TGCCTGCAGGGATATTGGTC 59.817 55.000 33.46 14.10 37.23 4.02
4324 5066 0.184451 CTGCCTGCAGGGATATTGGT 59.816 55.000 33.46 0.00 40.17 3.67
4325 5067 1.177256 GCTGCCTGCAGGGATATTGG 61.177 60.000 33.46 19.47 43.77 3.16
4326 5068 1.177256 GGCTGCCTGCAGGGATATTG 61.177 60.000 33.46 19.85 45.15 1.90
4327 5069 1.152368 GGCTGCCTGCAGGGATATT 59.848 57.895 33.46 0.00 45.15 1.28
4328 5070 1.773391 AGGCTGCCTGCAGGGATAT 60.773 57.895 33.46 16.68 45.15 1.63
4329 5071 2.367377 AGGCTGCCTGCAGGGATA 60.367 61.111 33.46 7.07 45.15 2.59
4330 5072 3.806667 GAGGCTGCCTGCAGGGAT 61.807 66.667 33.46 17.09 45.15 3.85
4332 5074 4.044439 AAGAGGCTGCCTGCAGGG 62.044 66.667 33.46 19.16 45.15 4.45
4333 5075 2.750637 CAAGAGGCTGCCTGCAGG 60.751 66.667 28.82 29.34 45.15 4.85
4334 5076 2.033757 ACAAGAGGCTGCCTGCAG 59.966 61.111 28.82 16.90 45.15 4.41
4335 5077 2.281970 CACAAGAGGCTGCCTGCA 60.282 61.111 28.82 0.00 45.15 4.41
4336 5078 1.584380 CTTCACAAGAGGCTGCCTGC 61.584 60.000 28.82 17.22 41.94 4.85
4337 5079 0.959372 CCTTCACAAGAGGCTGCCTG 60.959 60.000 28.82 15.64 31.76 4.85
4338 5080 1.377994 CCTTCACAAGAGGCTGCCT 59.622 57.895 23.64 23.64 36.03 4.75
4339 5081 0.538287 AACCTTCACAAGAGGCTGCC 60.538 55.000 11.65 11.65 0.00 4.85
4340 5082 0.877743 GAACCTTCACAAGAGGCTGC 59.122 55.000 0.00 0.00 0.00 5.25
4341 5083 2.260844 TGAACCTTCACAAGAGGCTG 57.739 50.000 0.00 0.00 31.01 4.85
4351 5093 1.017177 GCGCCGTATGTGAACCTTCA 61.017 55.000 0.00 0.00 34.20 3.02
4352 5094 1.017177 TGCGCCGTATGTGAACCTTC 61.017 55.000 4.18 0.00 0.00 3.46
4353 5095 0.392461 ATGCGCCGTATGTGAACCTT 60.392 50.000 4.18 0.00 0.00 3.50
4354 5096 0.810031 GATGCGCCGTATGTGAACCT 60.810 55.000 4.18 0.00 0.00 3.50
4355 5097 1.087202 TGATGCGCCGTATGTGAACC 61.087 55.000 4.18 0.00 0.00 3.62
4356 5098 0.301687 CTGATGCGCCGTATGTGAAC 59.698 55.000 4.18 0.00 0.00 3.18
4357 5099 1.428370 GCTGATGCGCCGTATGTGAA 61.428 55.000 4.18 0.00 0.00 3.18
4358 5100 1.882625 GCTGATGCGCCGTATGTGA 60.883 57.895 4.18 0.00 0.00 3.58
4359 5101 2.628106 GCTGATGCGCCGTATGTG 59.372 61.111 4.18 0.00 0.00 3.21
4369 5111 1.351012 GCACACTGATCGCTGATGC 59.649 57.895 0.00 0.00 0.00 3.91
4370 5112 1.759293 CGGCACACTGATCGCTGATG 61.759 60.000 0.00 0.00 33.74 3.07
4371 5113 1.520120 CGGCACACTGATCGCTGAT 60.520 57.895 0.00 0.00 33.74 2.90
4372 5114 2.125952 CGGCACACTGATCGCTGA 60.126 61.111 0.00 0.00 33.74 4.26
4373 5115 3.857854 GCGGCACACTGATCGCTG 61.858 66.667 0.00 0.00 44.10 5.18
4376 5118 3.857854 GCTGCGGCACACTGATCG 61.858 66.667 14.08 0.00 38.54 3.69
4377 5119 2.743538 TGCTGCGGCACACTGATC 60.744 61.111 18.37 0.00 44.28 2.92
4394 5136 6.155221 TGGAGCTCTCATAGAAACACTAATGT 59.845 38.462 14.64 0.00 42.46 2.71
4395 5137 6.478344 GTGGAGCTCTCATAGAAACACTAATG 59.522 42.308 14.64 0.00 34.56 1.90
4396 5138 6.407525 GGTGGAGCTCTCATAGAAACACTAAT 60.408 42.308 14.64 0.00 34.56 1.73
4397 5139 5.105310 GGTGGAGCTCTCATAGAAACACTAA 60.105 44.000 14.64 0.00 34.56 2.24
4398 5140 4.402793 GGTGGAGCTCTCATAGAAACACTA 59.597 45.833 14.64 0.00 35.42 2.74
4399 5141 3.196685 GGTGGAGCTCTCATAGAAACACT 59.803 47.826 14.64 0.00 0.00 3.55
4400 5142 3.526534 GGTGGAGCTCTCATAGAAACAC 58.473 50.000 14.64 9.35 0.00 3.32
4401 5143 2.501723 GGGTGGAGCTCTCATAGAAACA 59.498 50.000 14.64 0.00 0.00 2.83
4402 5144 2.501723 TGGGTGGAGCTCTCATAGAAAC 59.498 50.000 14.64 0.00 0.00 2.78
4403 5145 2.768527 CTGGGTGGAGCTCTCATAGAAA 59.231 50.000 14.64 0.00 0.00 2.52
4404 5146 2.392662 CTGGGTGGAGCTCTCATAGAA 58.607 52.381 14.64 0.00 0.00 2.10
4405 5147 1.412217 CCTGGGTGGAGCTCTCATAGA 60.412 57.143 14.64 0.00 38.35 1.98
4406 5148 1.047002 CCTGGGTGGAGCTCTCATAG 58.953 60.000 14.64 9.51 38.35 2.23
4407 5149 1.050988 GCCTGGGTGGAGCTCTCATA 61.051 60.000 14.64 0.00 38.35 2.15
4408 5150 2.373707 GCCTGGGTGGAGCTCTCAT 61.374 63.158 14.64 0.00 38.35 2.90
4409 5151 2.168272 TAGCCTGGGTGGAGCTCTCA 62.168 60.000 14.64 7.25 38.06 3.27
4410 5152 1.381872 TAGCCTGGGTGGAGCTCTC 60.382 63.158 14.64 7.27 38.06 3.20
4411 5153 1.382420 CTAGCCTGGGTGGAGCTCT 60.382 63.158 14.64 0.00 38.06 4.09
4412 5154 0.397254 TACTAGCCTGGGTGGAGCTC 60.397 60.000 16.51 4.71 38.06 4.09
4413 5155 0.266152 ATACTAGCCTGGGTGGAGCT 59.734 55.000 16.51 0.00 40.66 4.09
4414 5156 1.132500 AATACTAGCCTGGGTGGAGC 58.868 55.000 16.51 0.00 38.35 4.70
4415 5157 2.119495 ACAATACTAGCCTGGGTGGAG 58.881 52.381 16.51 5.18 38.35 3.86
4416 5158 2.263895 ACAATACTAGCCTGGGTGGA 57.736 50.000 16.51 0.00 38.35 4.02
4417 5159 4.505039 GGAATACAATACTAGCCTGGGTGG 60.505 50.000 9.02 8.37 39.35 4.61
4418 5160 4.505039 GGGAATACAATACTAGCCTGGGTG 60.505 50.000 9.02 1.25 0.00 4.61
4419 5161 3.651423 GGGAATACAATACTAGCCTGGGT 59.349 47.826 2.98 2.98 0.00 4.51
4420 5162 3.650942 TGGGAATACAATACTAGCCTGGG 59.349 47.826 0.00 0.00 0.00 4.45
4421 5163 4.642429 GTGGGAATACAATACTAGCCTGG 58.358 47.826 0.00 0.00 0.00 4.45
4422 5164 4.307432 CGTGGGAATACAATACTAGCCTG 58.693 47.826 0.00 0.00 0.00 4.85
4423 5165 3.323979 CCGTGGGAATACAATACTAGCCT 59.676 47.826 0.00 0.00 0.00 4.58
4424 5166 3.070590 ACCGTGGGAATACAATACTAGCC 59.929 47.826 0.00 0.00 0.00 3.93
4425 5167 4.332428 ACCGTGGGAATACAATACTAGC 57.668 45.455 0.00 0.00 0.00 3.42
4426 5168 6.110707 ACAAACCGTGGGAATACAATACTAG 58.889 40.000 0.00 0.00 0.00 2.57
4427 5169 6.052405 ACAAACCGTGGGAATACAATACTA 57.948 37.500 0.00 0.00 0.00 1.82
4428 5170 4.913784 ACAAACCGTGGGAATACAATACT 58.086 39.130 0.00 0.00 0.00 2.12
4429 5171 4.095334 GGACAAACCGTGGGAATACAATAC 59.905 45.833 0.00 0.00 0.00 1.89
4430 5172 4.263435 GGACAAACCGTGGGAATACAATA 58.737 43.478 0.00 0.00 0.00 1.90
4431 5173 3.086282 GGACAAACCGTGGGAATACAAT 58.914 45.455 0.00 0.00 0.00 2.71
4432 5174 2.506444 GGACAAACCGTGGGAATACAA 58.494 47.619 0.00 0.00 0.00 2.41
4433 5175 1.271488 GGGACAAACCGTGGGAATACA 60.271 52.381 0.00 0.00 40.11 2.29
4434 5176 1.271488 TGGGACAAACCGTGGGAATAC 60.271 52.381 0.00 0.00 40.11 1.89
4435 5177 1.003812 CTGGGACAAACCGTGGGAATA 59.996 52.381 0.00 0.00 38.70 1.75
4436 5178 0.251165 CTGGGACAAACCGTGGGAAT 60.251 55.000 0.00 0.00 38.70 3.01
4437 5179 1.149627 CTGGGACAAACCGTGGGAA 59.850 57.895 0.00 0.00 38.70 3.97
4438 5180 2.833227 CTGGGACAAACCGTGGGA 59.167 61.111 0.00 0.00 38.70 4.37
4439 5181 2.119484 TAGCTGGGACAAACCGTGGG 62.119 60.000 0.00 0.00 38.70 4.61
4440 5182 0.035439 ATAGCTGGGACAAACCGTGG 60.035 55.000 0.00 0.00 38.70 4.94
4441 5183 1.086696 CATAGCTGGGACAAACCGTG 58.913 55.000 0.00 0.00 38.70 4.94
4442 5184 0.035439 CCATAGCTGGGACAAACCGT 60.035 55.000 0.00 0.00 38.70 4.83
4443 5185 1.376609 GCCATAGCTGGGACAAACCG 61.377 60.000 10.20 0.00 43.36 4.44
4444 5186 2.493547 GCCATAGCTGGGACAAACC 58.506 57.895 10.20 0.00 43.36 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.