Multiple sequence alignment - TraesCS4A01G256100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G256100 chr4A 100.000 5695 0 0 1 5695 567686775 567681081 0.000000e+00 10517.0
1 TraesCS4A01G256100 chr4A 94.000 300 13 2 420 715 518118410 518118112 3.130000e-122 449.0
2 TraesCS4A01G256100 chr4A 97.753 178 2 2 4681 4858 89423254 89423079 7.170000e-79 305.0
3 TraesCS4A01G256100 chr4A 93.137 204 12 2 4642 4845 3725790 3725991 1.200000e-76 298.0
4 TraesCS4A01G256100 chr4A 84.892 139 14 4 281 419 136431370 136431501 3.580000e-27 134.0
5 TraesCS4A01G256100 chr4D 96.413 2760 66 13 929 3668 34665759 34668505 0.000000e+00 4518.0
6 TraesCS4A01G256100 chr4D 96.827 851 27 0 3831 4681 34668491 34669341 0.000000e+00 1423.0
7 TraesCS4A01G256100 chr4D 96.122 851 28 3 4846 5695 34669325 34670171 0.000000e+00 1384.0
8 TraesCS4A01G256100 chr4D 91.285 459 33 4 1 455 34664814 34665269 2.250000e-173 619.0
9 TraesCS4A01G256100 chr4B 92.224 3022 146 27 714 3668 49740407 49743406 0.000000e+00 4196.0
10 TraesCS4A01G256100 chr4B 89.032 857 71 13 4846 5695 49744466 49745306 0.000000e+00 1040.0
11 TraesCS4A01G256100 chr4B 84.420 552 43 19 3828 4357 49743389 49743919 2.370000e-138 503.0
12 TraesCS4A01G256100 chr4B 96.000 250 6 2 1 247 49740012 49740260 2.470000e-108 403.0
13 TraesCS4A01G256100 chr4B 93.583 187 10 1 4497 4681 49744296 49744482 1.560000e-70 278.0
14 TraesCS4A01G256100 chr7A 94.237 295 13 1 420 710 645255651 645255945 1.130000e-121 448.0
15 TraesCS4A01G256100 chr7A 93.960 298 12 3 420 712 185196681 185196977 4.050000e-121 446.0
16 TraesCS4A01G256100 chr7A 92.905 296 18 1 420 712 477310119 477309824 1.470000e-115 427.0
17 TraesCS4A01G256100 chr7A 95.385 195 6 2 4651 4845 1709389 1709580 1.990000e-79 307.0
18 TraesCS4A01G256100 chr6D 93.464 306 13 4 413 712 308586223 308585919 1.130000e-121 448.0
19 TraesCS4A01G256100 chr6D 95.676 185 6 2 3665 3849 111664875 111665057 4.310000e-76 296.0
20 TraesCS4A01G256100 chr5A 94.237 295 13 1 420 710 165364958 165365252 1.130000e-121 448.0
21 TraesCS4A01G256100 chr5A 95.939 197 1 7 4665 4858 619094325 619094517 4.280000e-81 313.0
22 TraesCS4A01G256100 chr5A 95.385 195 8 1 4676 4869 439420903 439421097 5.540000e-80 309.0
23 TraesCS4A01G256100 chr5A 98.817 169 2 0 3665 3833 366234993 366234825 9.270000e-78 302.0
24 TraesCS4A01G256100 chr5A 94.652 187 10 0 3662 3848 612924151 612924337 2.010000e-74 291.0
25 TraesCS4A01G256100 chr2A 94.198 293 12 2 420 707 144846134 144845842 5.240000e-120 442.0
26 TraesCS4A01G256100 chr2A 93.289 298 15 2 420 712 278464065 278463768 8.760000e-118 435.0
27 TraesCS4A01G256100 chr2A 96.667 180 4 2 3665 3842 214289288 214289467 1.200000e-76 298.0
28 TraesCS4A01G256100 chr3A 92.715 302 16 3 420 715 458598018 458597717 1.130000e-116 431.0
29 TraesCS4A01G256100 chr3A 90.852 317 18 8 420 732 460588244 460588553 1.140000e-111 414.0
30 TraesCS4A01G256100 chr3A 98.295 176 2 1 4670 4845 57159273 57159447 1.990000e-79 307.0
31 TraesCS4A01G256100 chr3A 78.205 156 32 2 5129 5283 721634986 721635140 1.310000e-16 99.0
32 TraesCS4A01G256100 chr3A 86.275 51 7 0 5139 5189 722647202 722647252 7.970000e-04 56.5
33 TraesCS4A01G256100 chr3A 86.275 51 7 0 5139 5189 722687399 722687449 7.970000e-04 56.5
34 TraesCS4A01G256100 chr3A 86.275 51 7 0 5139 5189 722727771 722727821 7.970000e-04 56.5
35 TraesCS4A01G256100 chr3B 92.182 307 18 3 416 716 44639170 44638864 4.080000e-116 429.0
36 TraesCS4A01G256100 chr3B 98.295 176 3 0 4681 4856 689002691 689002866 5.540000e-80 309.0
37 TraesCS4A01G256100 chr3B 88.393 112 10 3 306 417 736713724 736713616 1.290000e-26 132.0
38 TraesCS4A01G256100 chr1A 91.857 307 16 5 422 723 95573655 95573353 2.450000e-113 420.0
39 TraesCS4A01G256100 chr1A 85.156 128 17 2 281 408 555641103 555641228 4.630000e-26 130.0
40 TraesCS4A01G256100 chr6A 98.315 178 1 2 4669 4845 582491065 582491241 1.540000e-80 311.0
41 TraesCS4A01G256100 chr6A 83.942 137 16 4 285 419 99403182 99403050 5.990000e-25 126.0
42 TraesCS4A01G256100 chr6A 85.833 120 15 2 284 403 391254569 391254452 5.990000e-25 126.0
43 TraesCS4A01G256100 chr6A 84.483 116 15 3 304 419 184388311 184388199 1.680000e-20 111.0
44 TraesCS4A01G256100 chr5B 97.778 180 4 0 4669 4848 209646397 209646218 1.540000e-80 311.0
45 TraesCS4A01G256100 chr5B 97.368 38 1 0 5139 5176 15181431 15181394 1.320000e-06 65.8
46 TraesCS4A01G256100 chr5D 98.817 169 2 0 3665 3833 292148063 292147895 9.270000e-78 302.0
47 TraesCS4A01G256100 chr5D 95.676 185 7 1 3665 3848 404500693 404500877 4.310000e-76 296.0
48 TraesCS4A01G256100 chr6B 97.701 174 3 1 3664 3837 120648850 120649022 1.200000e-76 298.0
49 TraesCS4A01G256100 chr6B 97.633 169 4 0 3665 3833 368473379 368473547 2.010000e-74 291.0
50 TraesCS4A01G256100 chr7B 94.211 190 9 2 3665 3852 253646230 253646041 7.220000e-74 289.0
51 TraesCS4A01G256100 chr7B 81.507 146 22 4 275 419 477607119 477607260 1.300000e-21 115.0
52 TraesCS4A01G256100 chr1B 82.639 144 19 5 277 419 156849609 156849747 7.750000e-24 122.0
53 TraesCS4A01G256100 chr1D 97.222 36 1 0 5139 5174 445997995 445997960 1.710000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G256100 chr4A 567681081 567686775 5694 True 10517 10517 100.00000 1 5695 1 chr4A.!!$R3 5694
1 TraesCS4A01G256100 chr4D 34664814 34670171 5357 False 1986 4518 95.16175 1 5695 4 chr4D.!!$F1 5694
2 TraesCS4A01G256100 chr4B 49740012 49745306 5294 False 1284 4196 91.05180 1 5695 5 chr4B.!!$F1 5694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 899 0.110486 TCCTGTGAACCAAAGGAGGC 59.890 55.0 1.83 0.00 42.43 4.70 F
709 901 0.111253 CTGTGAACCAAAGGAGGCCT 59.889 55.0 3.86 3.86 33.87 5.19 F
864 1086 0.176680 GCGACCCACTGATCATCACT 59.823 55.0 0.00 0.00 0.00 3.41 F
910 1139 0.250793 TTGTGGTGTCCGTCACAAGT 59.749 50.0 4.98 0.00 45.40 3.16 F
1900 2134 0.527817 GGATTCTGTCACCTACGGCG 60.528 60.0 4.80 4.80 34.14 6.46 F
3721 3986 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.0 0.00 0.00 35.66 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2284 2518 0.033109 GCAACAAATAGCCCCCTCCT 60.033 55.000 0.00 0.0 0.00 3.69 R
2289 2523 0.246360 GTGGTGCAACAAATAGCCCC 59.754 55.000 5.70 0.0 39.98 5.80 R
2367 2601 0.678950 AACCCCAAACATCCTTTGCG 59.321 50.000 0.00 0.0 0.00 4.85 R
2727 2961 3.808834 TCTCTAGACTGACCCTGAACA 57.191 47.619 0.00 0.0 0.00 3.18 R
3731 3996 0.179037 GCTCTGCCACATGGATAGCA 60.179 55.000 0.87 0.0 36.42 3.49 R
5613 6144 0.036388 GGCTGTTCTCCGTTGATCCA 60.036 55.000 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 129 3.525800 AACTGGTTAAGGAGCCAACAT 57.474 42.857 0.00 0.00 33.93 2.71
162 166 1.202976 AGGAATATGCATCCCAGTGCC 60.203 52.381 0.19 0.00 44.43 5.01
292 296 5.616204 GCACGTTGTAAAATTGTACTCCCTC 60.616 44.000 7.31 0.00 0.00 4.30
295 299 5.929992 CGTTGTAAAATTGTACTCCCTCTGA 59.070 40.000 7.31 0.00 0.00 3.27
296 300 6.128634 CGTTGTAAAATTGTACTCCCTCTGAC 60.129 42.308 7.31 0.00 0.00 3.51
302 306 4.808414 TTGTACTCCCTCTGACTTCATG 57.192 45.455 0.00 0.00 0.00 3.07
356 360 7.684670 TGAACGACATATAAACTGAAATGAGC 58.315 34.615 0.00 0.00 0.00 4.26
368 372 4.036734 ACTGAAATGAGCGAACAAACACAT 59.963 37.500 0.00 0.00 0.00 3.21
403 407 7.864379 GTCCATATGCATTCGATTCAGAAAAAT 59.136 33.333 3.54 0.00 33.43 1.82
425 430 5.036117 TGTTATAGAACATCTTGGCCTCC 57.964 43.478 3.32 0.00 40.72 4.30
430 435 1.821136 GAACATCTTGGCCTCCTTTGG 59.179 52.381 3.32 0.00 0.00 3.28
433 438 2.250924 CATCTTGGCCTCCTTTGGTTT 58.749 47.619 3.32 0.00 0.00 3.27
434 439 1.703411 TCTTGGCCTCCTTTGGTTTG 58.297 50.000 3.32 0.00 0.00 2.93
435 440 1.063266 TCTTGGCCTCCTTTGGTTTGT 60.063 47.619 3.32 0.00 0.00 2.83
442 447 3.444034 GCCTCCTTTGGTTTGTAGGAATC 59.556 47.826 0.00 0.00 37.61 2.52
443 448 4.811063 GCCTCCTTTGGTTTGTAGGAATCT 60.811 45.833 0.00 0.00 37.61 2.40
445 450 6.481643 CCTCCTTTGGTTTGTAGGAATCTTA 58.518 40.000 0.00 0.00 37.61 2.10
489 497 7.656707 TGCATAGGAAATTTTTCTTTGAAGC 57.343 32.000 10.92 3.36 37.35 3.86
492 500 5.894298 AGGAAATTTTTCTTTGAAGCCCT 57.106 34.783 3.28 0.00 37.35 5.19
495 503 6.543465 AGGAAATTTTTCTTTGAAGCCCTTTG 59.457 34.615 3.28 0.00 37.35 2.77
497 505 4.835284 TTTTTCTTTGAAGCCCTTTGGT 57.165 36.364 0.00 0.00 0.00 3.67
500 508 3.817709 TCTTTGAAGCCCTTTGGTTTG 57.182 42.857 0.00 0.00 34.87 2.93
501 509 3.103742 TCTTTGAAGCCCTTTGGTTTGT 58.896 40.909 0.00 0.00 34.87 2.83
502 510 4.282496 TCTTTGAAGCCCTTTGGTTTGTA 58.718 39.130 0.00 0.00 34.87 2.41
503 511 4.340950 TCTTTGAAGCCCTTTGGTTTGTAG 59.659 41.667 0.00 0.00 34.87 2.74
508 516 3.165071 AGCCCTTTGGTTTGTAGGAATG 58.835 45.455 0.00 0.00 0.00 2.67
509 517 3.161866 GCCCTTTGGTTTGTAGGAATGA 58.838 45.455 0.00 0.00 0.00 2.57
510 518 3.576550 GCCCTTTGGTTTGTAGGAATGAA 59.423 43.478 0.00 0.00 0.00 2.57
511 519 4.222810 GCCCTTTGGTTTGTAGGAATGAAT 59.777 41.667 0.00 0.00 0.00 2.57
513 521 6.398095 CCCTTTGGTTTGTAGGAATGAATTC 58.602 40.000 0.00 0.00 36.08 2.17
559 654 9.927668 GAATCAATCCTTTACATTTTGGAGAAA 57.072 29.630 0.00 0.00 31.59 2.52
585 680 8.635765 AAAAACATTAGCTAAGACTCAATGGA 57.364 30.769 12.54 0.00 32.20 3.41
586 681 8.635765 AAAACATTAGCTAAGACTCAATGGAA 57.364 30.769 12.54 0.00 32.20 3.53
589 684 8.635765 ACATTAGCTAAGACTCAATGGAAAAA 57.364 30.769 12.54 0.00 32.20 1.94
611 803 9.991906 AAAAATTCCTATCCTATGCATCAAATG 57.008 29.630 0.19 0.00 0.00 2.32
612 804 8.945195 AAATTCCTATCCTATGCATCAAATGA 57.055 30.769 0.19 0.00 0.00 2.57
613 805 7.934855 ATTCCTATCCTATGCATCAAATGAC 57.065 36.000 0.19 0.00 0.00 3.06
614 806 6.438186 TCCTATCCTATGCATCAAATGACA 57.562 37.500 0.19 0.00 0.00 3.58
615 807 7.024345 TCCTATCCTATGCATCAAATGACAT 57.976 36.000 0.19 0.00 33.67 3.06
616 808 7.108194 TCCTATCCTATGCATCAAATGACATC 58.892 38.462 0.19 0.00 32.25 3.06
618 810 7.280428 CCTATCCTATGCATCAAATGACATCTC 59.720 40.741 0.19 0.00 32.25 2.75
619 811 6.183810 TCCTATGCATCAAATGACATCTCT 57.816 37.500 0.19 0.00 32.25 3.10
620 812 6.598503 TCCTATGCATCAAATGACATCTCTT 58.401 36.000 0.19 0.00 32.25 2.85
622 814 7.228108 TCCTATGCATCAAATGACATCTCTTTC 59.772 37.037 0.19 0.00 32.25 2.62
623 815 7.228906 CCTATGCATCAAATGACATCTCTTTCT 59.771 37.037 0.19 0.00 32.25 2.52
624 816 6.432607 TGCATCAAATGACATCTCTTTCTC 57.567 37.500 0.00 0.00 0.00 2.87
625 817 6.178324 TGCATCAAATGACATCTCTTTCTCT 58.822 36.000 0.00 0.00 0.00 3.10
626 818 7.333323 TGCATCAAATGACATCTCTTTCTCTA 58.667 34.615 0.00 0.00 0.00 2.43
631 823 9.426534 TCAAATGACATCTCTTTCTCTATAGGA 57.573 33.333 0.00 0.00 0.00 2.94
636 828 9.426534 TGACATCTCTTTCTCTATAGGAATTGA 57.573 33.333 0.00 4.25 0.00 2.57
638 830 9.653516 ACATCTCTTTCTCTATAGGAATTGAGA 57.346 33.333 21.74 21.74 40.68 3.27
659 851 7.517614 GAGATACATGTCATCTCACTTCCTA 57.482 40.000 24.95 0.62 45.17 2.94
661 853 7.894708 AGATACATGTCATCTCACTTCCTATG 58.105 38.462 0.00 0.00 0.00 2.23
663 855 6.744175 ACATGTCATCTCACTTCCTATGAT 57.256 37.500 0.00 0.00 31.49 2.45
664 856 7.134362 ACATGTCATCTCACTTCCTATGATT 57.866 36.000 0.00 0.00 31.49 2.57
665 857 7.571919 ACATGTCATCTCACTTCCTATGATTT 58.428 34.615 0.00 0.00 31.49 2.17
667 859 8.900781 CATGTCATCTCACTTCCTATGATTTTT 58.099 33.333 0.00 0.00 31.49 1.94
668 860 8.498054 TGTCATCTCACTTCCTATGATTTTTC 57.502 34.615 0.00 0.00 31.49 2.29
669 861 8.324306 TGTCATCTCACTTCCTATGATTTTTCT 58.676 33.333 0.00 0.00 31.49 2.52
674 866 9.838339 TCTCACTTCCTATGATTTTTCTATTCC 57.162 33.333 0.00 0.00 0.00 3.01
675 867 9.844257 CTCACTTCCTATGATTTTTCTATTCCT 57.156 33.333 0.00 0.00 0.00 3.36
697 889 9.832445 TTCCTATAACATTCTTATCCTGTGAAC 57.168 33.333 0.00 0.00 0.00 3.18
698 890 8.429641 TCCTATAACATTCTTATCCTGTGAACC 58.570 37.037 0.00 0.00 0.00 3.62
699 891 8.210946 CCTATAACATTCTTATCCTGTGAACCA 58.789 37.037 0.00 0.00 0.00 3.67
700 892 9.613428 CTATAACATTCTTATCCTGTGAACCAA 57.387 33.333 0.00 0.00 0.00 3.67
701 893 8.877864 ATAACATTCTTATCCTGTGAACCAAA 57.122 30.769 0.00 0.00 0.00 3.28
702 894 6.824305 ACATTCTTATCCTGTGAACCAAAG 57.176 37.500 0.00 0.00 0.00 2.77
703 895 5.711976 ACATTCTTATCCTGTGAACCAAAGG 59.288 40.000 0.00 0.00 40.12 3.11
707 899 0.110486 TCCTGTGAACCAAAGGAGGC 59.890 55.000 1.83 0.00 42.43 4.70
708 900 0.895559 CCTGTGAACCAAAGGAGGCC 60.896 60.000 0.00 0.00 41.22 5.19
709 901 0.111253 CTGTGAACCAAAGGAGGCCT 59.889 55.000 3.86 3.86 33.87 5.19
711 903 1.777878 TGTGAACCAAAGGAGGCCTTA 59.222 47.619 6.77 0.00 43.92 2.69
712 904 2.160205 GTGAACCAAAGGAGGCCTTAC 58.840 52.381 6.77 2.89 43.92 2.34
726 918 4.332828 AGGCCTTACAGTATTTGTGAACC 58.667 43.478 0.00 0.00 41.10 3.62
753 953 9.796180 GAAGGAGTATATACTGAGTAAGGAGAA 57.204 37.037 20.13 0.00 36.50 2.87
863 1085 0.811616 GGCGACCCACTGATCATCAC 60.812 60.000 0.00 0.00 0.00 3.06
864 1086 0.176680 GCGACCCACTGATCATCACT 59.823 55.000 0.00 0.00 0.00 3.41
865 1087 1.804372 GCGACCCACTGATCATCACTC 60.804 57.143 0.00 0.00 0.00 3.51
866 1088 1.478105 CGACCCACTGATCATCACTCA 59.522 52.381 0.00 0.00 0.00 3.41
867 1089 2.102084 CGACCCACTGATCATCACTCAT 59.898 50.000 0.00 0.00 0.00 2.90
868 1090 3.726607 GACCCACTGATCATCACTCATC 58.273 50.000 0.00 0.00 0.00 2.92
869 1091 3.109928 ACCCACTGATCATCACTCATCA 58.890 45.455 0.00 0.00 0.00 3.07
876 1098 6.532365 CTGATCATCACTCATCAGTTCATG 57.468 41.667 0.00 0.00 40.78 3.07
910 1139 0.250793 TTGTGGTGTCCGTCACAAGT 59.749 50.000 4.98 0.00 45.40 3.16
912 1141 2.103432 TTGTGGTGTCCGTCACAAGTAT 59.897 45.455 4.98 0.00 45.40 2.12
913 1142 3.800949 TTGTGGTGTCCGTCACAAGTATC 60.801 47.826 4.98 0.00 45.40 2.24
914 1143 6.010991 TTGTGGTGTCCGTCACAAGTATCT 62.011 45.833 4.98 0.00 45.40 1.98
915 1144 7.421464 TTGTGGTGTCCGTCACAAGTATCTT 62.421 44.000 4.98 0.00 45.40 2.40
917 1146 3.909430 GTGTCCGTCACAAGTATCTTGA 58.091 45.455 15.04 0.00 45.51 3.02
918 1147 3.921021 GTGTCCGTCACAAGTATCTTGAG 59.079 47.826 15.04 8.23 45.51 3.02
919 1148 3.572682 TGTCCGTCACAAGTATCTTGAGT 59.427 43.478 15.04 0.00 29.30 3.41
936 1165 3.807553 TGAGTTCTTGACTGACATGCAA 58.192 40.909 0.00 0.00 39.19 4.08
945 1174 4.061596 TGACTGACATGCAATTGTTCGTA 58.938 39.130 7.40 0.00 0.00 3.43
947 1176 4.973396 ACTGACATGCAATTGTTCGTATG 58.027 39.130 7.40 7.15 0.00 2.39
948 1177 4.694982 ACTGACATGCAATTGTTCGTATGA 59.305 37.500 7.40 0.00 0.00 2.15
1383 1617 1.153989 CCTCTCGGCCTCCATCCTA 59.846 63.158 0.00 0.00 0.00 2.94
1584 1818 2.701780 CGAGCTCCGCCACTACACT 61.702 63.158 8.47 0.00 0.00 3.55
1830 2064 3.015753 GGGTCCAAGGGGAGGGTC 61.016 72.222 0.00 0.00 46.12 4.46
1900 2134 0.527817 GGATTCTGTCACCTACGGCG 60.528 60.000 4.80 4.80 34.14 6.46
1910 2144 1.065928 CCTACGGCGCTCTGGTTAG 59.934 63.158 6.90 0.00 0.00 2.34
2225 2459 2.198827 ACCTTCGCAATCATGGTGAA 57.801 45.000 0.00 0.00 34.01 3.18
2284 2518 5.479724 TGCAATTATTTCAAGGACATGGTCA 59.520 36.000 0.00 0.00 33.68 4.02
2289 2523 1.279496 TCAAGGACATGGTCAGGAGG 58.721 55.000 0.00 0.00 33.68 4.30
2367 2601 4.864247 GTCAGAGATGAGAAACTTGAGCTC 59.136 45.833 6.82 6.82 0.00 4.09
2505 2739 1.220206 CTTGGACATGCTCGAGGCT 59.780 57.895 15.58 0.00 42.39 4.58
2622 2856 1.144936 GTTGATGGCGGAGGAGAGG 59.855 63.158 0.00 0.00 0.00 3.69
2727 2961 3.966930 GAGTCGGGGGAGGCAGACT 62.967 68.421 0.00 0.00 45.46 3.24
2828 3062 3.319122 GGATCATAAGTGGGCAATGAACC 59.681 47.826 0.00 0.00 36.02 3.62
2977 3211 1.367840 GAGCCAAGTGACACTCCGT 59.632 57.895 8.93 0.00 0.00 4.69
3134 3368 0.459489 CAGCCTGTCTGAGCTAGGTC 59.541 60.000 15.12 15.12 45.72 3.85
3265 3504 5.946942 ACTCATCACTCCATCAGTTATGT 57.053 39.130 0.00 0.00 37.79 2.29
3339 3579 7.884257 TCTTCATGCTTATCTCTGAGATACTG 58.116 38.462 23.42 19.38 36.96 2.74
3445 3689 6.017687 TGTTCACTGTGATTGAAGAGTTGATG 60.018 38.462 11.86 0.00 33.63 3.07
3531 3781 7.575414 AATGTGTAAACCATGTAAACTCACA 57.425 32.000 0.00 0.00 37.61 3.58
3671 3936 8.972127 AGTACTGCTGTATTGATCTTTAAGAGA 58.028 33.333 6.73 0.00 39.13 3.10
3672 3937 9.243637 GTACTGCTGTATTGATCTTTAAGAGAG 57.756 37.037 6.73 0.00 37.93 3.20
3673 3938 8.072321 ACTGCTGTATTGATCTTTAAGAGAGA 57.928 34.615 0.03 0.00 37.93 3.10
3674 3939 7.978975 ACTGCTGTATTGATCTTTAAGAGAGAC 59.021 37.037 0.03 0.00 37.93 3.36
3675 3940 7.268586 TGCTGTATTGATCTTTAAGAGAGACC 58.731 38.462 0.03 0.00 37.93 3.85
3676 3941 7.124901 TGCTGTATTGATCTTTAAGAGAGACCT 59.875 37.037 0.03 0.00 37.93 3.85
3677 3942 7.437862 GCTGTATTGATCTTTAAGAGAGACCTG 59.562 40.741 0.03 0.00 37.93 4.00
3678 3943 8.595362 TGTATTGATCTTTAAGAGAGACCTGA 57.405 34.615 0.03 0.00 37.93 3.86
3679 3944 9.035890 TGTATTGATCTTTAAGAGAGACCTGAA 57.964 33.333 0.03 0.00 37.93 3.02
3680 3945 9.528018 GTATTGATCTTTAAGAGAGACCTGAAG 57.472 37.037 0.03 0.00 37.93 3.02
3681 3946 6.537453 TGATCTTTAAGAGAGACCTGAAGG 57.463 41.667 0.03 0.00 37.93 3.46
3682 3947 6.256819 TGATCTTTAAGAGAGACCTGAAGGA 58.743 40.000 2.62 0.00 37.93 3.36
3683 3948 6.900186 TGATCTTTAAGAGAGACCTGAAGGAT 59.100 38.462 2.62 0.00 37.93 3.24
3684 3949 7.401493 TGATCTTTAAGAGAGACCTGAAGGATT 59.599 37.037 2.62 0.00 37.93 3.01
3685 3950 6.940739 TCTTTAAGAGAGACCTGAAGGATTG 58.059 40.000 2.62 0.00 38.94 2.67
3686 3951 5.683876 TTAAGAGAGACCTGAAGGATTGG 57.316 43.478 2.62 0.00 38.94 3.16
3687 3952 3.481559 AGAGAGACCTGAAGGATTGGA 57.518 47.619 2.62 0.00 38.94 3.53
3688 3953 3.373830 AGAGAGACCTGAAGGATTGGAG 58.626 50.000 2.62 0.00 38.94 3.86
3689 3954 3.103742 GAGAGACCTGAAGGATTGGAGT 58.896 50.000 2.62 0.00 38.94 3.85
3690 3955 4.017037 AGAGAGACCTGAAGGATTGGAGTA 60.017 45.833 2.62 0.00 38.94 2.59
3691 3956 4.889780 AGAGACCTGAAGGATTGGAGTAT 58.110 43.478 2.62 0.00 38.94 2.12
3692 3957 4.898861 AGAGACCTGAAGGATTGGAGTATC 59.101 45.833 2.62 0.00 38.94 2.24
3693 3958 4.624913 AGACCTGAAGGATTGGAGTATCA 58.375 43.478 2.62 0.00 38.94 2.15
3694 3959 4.407296 AGACCTGAAGGATTGGAGTATCAC 59.593 45.833 2.62 0.00 38.94 3.06
3695 3960 3.456277 ACCTGAAGGATTGGAGTATCACC 59.544 47.826 2.62 0.00 38.94 4.02
3696 3961 3.455910 CCTGAAGGATTGGAGTATCACCA 59.544 47.826 0.00 0.00 34.60 4.17
3697 3962 6.527086 ACCTGAAGGATTGGAGTATCACCAA 61.527 44.000 2.62 0.00 43.61 3.67
3698 3963 7.950045 ACCTGAAGGATTGGAGTATCACCAAA 61.950 42.308 2.62 0.00 43.17 3.28
3699 3964 9.647145 ACCTGAAGGATTGGAGTATCACCAAAG 62.647 44.444 2.62 0.00 43.17 2.77
3706 3971 5.086104 TGGAGTATCACCAAAGAACTAGC 57.914 43.478 0.00 0.00 36.25 3.42
3707 3972 4.777896 TGGAGTATCACCAAAGAACTAGCT 59.222 41.667 0.00 0.00 36.25 3.32
3708 3973 5.955959 TGGAGTATCACCAAAGAACTAGCTA 59.044 40.000 0.00 0.00 36.25 3.32
3709 3974 6.611642 TGGAGTATCACCAAAGAACTAGCTAT 59.388 38.462 0.00 0.00 36.25 2.97
3710 3975 6.926272 GGAGTATCACCAAAGAACTAGCTATG 59.074 42.308 0.00 0.00 36.25 2.23
3711 3976 6.821388 AGTATCACCAAAGAACTAGCTATGG 58.179 40.000 7.17 7.17 0.00 2.74
3712 3977 5.957771 ATCACCAAAGAACTAGCTATGGA 57.042 39.130 14.35 0.00 0.00 3.41
3713 3978 5.086104 TCACCAAAGAACTAGCTATGGAC 57.914 43.478 14.35 0.00 0.00 4.02
3714 3979 4.530553 TCACCAAAGAACTAGCTATGGACA 59.469 41.667 14.35 0.00 0.00 4.02
3715 3980 4.872691 CACCAAAGAACTAGCTATGGACAG 59.127 45.833 14.35 0.00 0.00 3.51
3716 3981 4.080863 ACCAAAGAACTAGCTATGGACAGG 60.081 45.833 14.35 5.47 0.00 4.00
3717 3982 4.446371 CAAAGAACTAGCTATGGACAGGG 58.554 47.826 0.00 0.00 0.00 4.45
3718 3983 2.683768 AGAACTAGCTATGGACAGGGG 58.316 52.381 0.00 0.00 0.00 4.79
3719 3984 2.022918 AGAACTAGCTATGGACAGGGGT 60.023 50.000 0.00 0.00 0.00 4.95
3720 3985 1.794714 ACTAGCTATGGACAGGGGTG 58.205 55.000 0.00 0.00 0.00 4.61
3721 3986 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
3722 3987 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
3723 3988 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
3724 3989 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
3725 3990 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
3727 3992 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
3728 3993 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
3729 3994 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
3730 3995 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
3731 3996 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
3732 3997 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
3733 3998 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
3734 3999 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
3735 4000 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
3736 4001 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
3737 4002 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
3738 4003 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
3739 4004 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
3740 4005 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
3741 4006 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
3742 4007 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
3743 4008 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
3744 4009 1.952296 GGAAGCTTGCTATCCATGTGG 59.048 52.381 11.19 0.00 33.30 4.17
3745 4010 1.336125 GAAGCTTGCTATCCATGTGGC 59.664 52.381 2.10 0.00 34.44 5.01
3746 4011 0.256752 AGCTTGCTATCCATGTGGCA 59.743 50.000 0.00 0.00 34.44 4.92
3747 4012 0.666913 GCTTGCTATCCATGTGGCAG 59.333 55.000 0.00 0.00 36.06 4.85
3748 4013 1.748244 GCTTGCTATCCATGTGGCAGA 60.748 52.381 0.00 0.00 36.06 4.26
3749 4014 2.219458 CTTGCTATCCATGTGGCAGAG 58.781 52.381 0.00 0.00 36.06 3.35
3750 4015 0.179037 TGCTATCCATGTGGCAGAGC 60.179 55.000 10.76 10.76 35.67 4.09
3767 4032 3.786101 CCATGAGTTGGTCGCGAG 58.214 61.111 10.24 0.00 40.99 5.03
3768 4033 1.215382 CCATGAGTTGGTCGCGAGA 59.785 57.895 10.24 0.00 40.99 4.04
3769 4034 0.179100 CCATGAGTTGGTCGCGAGAT 60.179 55.000 10.24 0.00 45.19 2.75
3770 4035 1.203928 CATGAGTTGGTCGCGAGATC 58.796 55.000 10.24 2.63 45.19 2.75
3771 4036 1.107114 ATGAGTTGGTCGCGAGATCT 58.893 50.000 10.24 5.84 43.23 2.75
3772 4037 0.888619 TGAGTTGGTCGCGAGATCTT 59.111 50.000 10.24 0.00 43.23 2.40
3773 4038 2.089201 TGAGTTGGTCGCGAGATCTTA 58.911 47.619 10.24 0.00 43.23 2.10
3774 4039 2.688446 TGAGTTGGTCGCGAGATCTTAT 59.312 45.455 10.24 0.00 43.23 1.73
3775 4040 3.046390 GAGTTGGTCGCGAGATCTTATG 58.954 50.000 10.24 0.00 43.23 1.90
3776 4041 2.128035 GTTGGTCGCGAGATCTTATGG 58.872 52.381 10.24 0.00 43.23 2.74
3777 4042 0.673985 TGGTCGCGAGATCTTATGGG 59.326 55.000 10.24 0.00 43.23 4.00
3778 4043 0.674534 GGTCGCGAGATCTTATGGGT 59.325 55.000 10.24 0.00 45.19 4.51
3779 4044 1.068741 GGTCGCGAGATCTTATGGGTT 59.931 52.381 10.24 0.00 45.19 4.11
3780 4045 2.483188 GGTCGCGAGATCTTATGGGTTT 60.483 50.000 10.24 0.00 45.19 3.27
3781 4046 2.795470 GTCGCGAGATCTTATGGGTTTC 59.205 50.000 10.24 0.00 45.19 2.78
3782 4047 2.429250 TCGCGAGATCTTATGGGTTTCA 59.571 45.455 3.71 0.00 33.31 2.69
3783 4048 2.540101 CGCGAGATCTTATGGGTTTCAC 59.460 50.000 0.00 0.00 0.00 3.18
3784 4049 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
3785 4050 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
3786 4051 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
3787 4052 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
3788 4053 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
3789 4054 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
3790 4055 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
3791 4056 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
3792 4057 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
3793 4058 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
3794 4059 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
3795 4060 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
3796 4061 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
3797 4062 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
3798 4063 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
3799 4064 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
3800 4065 1.294068 TCACCTCTAGCCTACCCCAAT 59.706 52.381 0.00 0.00 0.00 3.16
3801 4066 2.127708 CACCTCTAGCCTACCCCAATT 58.872 52.381 0.00 0.00 0.00 2.32
3802 4067 2.509964 CACCTCTAGCCTACCCCAATTT 59.490 50.000 0.00 0.00 0.00 1.82
3803 4068 2.509964 ACCTCTAGCCTACCCCAATTTG 59.490 50.000 0.00 0.00 0.00 2.32
3804 4069 2.509964 CCTCTAGCCTACCCCAATTTGT 59.490 50.000 0.00 0.00 0.00 2.83
3805 4070 3.053619 CCTCTAGCCTACCCCAATTTGTT 60.054 47.826 0.00 0.00 0.00 2.83
3806 4071 4.569865 CCTCTAGCCTACCCCAATTTGTTT 60.570 45.833 0.00 0.00 0.00 2.83
3807 4072 4.340617 TCTAGCCTACCCCAATTTGTTTG 58.659 43.478 0.00 0.00 34.93 2.93
3819 4084 5.213891 CAATTTGTTTGGGACTAAAGGCT 57.786 39.130 0.00 0.00 0.00 4.58
3820 4085 5.610398 CAATTTGTTTGGGACTAAAGGCTT 58.390 37.500 0.00 0.00 0.00 4.35
3821 4086 5.887214 ATTTGTTTGGGACTAAAGGCTTT 57.113 34.783 17.76 17.76 0.00 3.51
3822 4087 4.664150 TTGTTTGGGACTAAAGGCTTTG 57.336 40.909 22.32 13.97 0.00 2.77
3823 4088 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
3824 4089 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
3825 4090 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
3826 4091 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
3829 4094 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
3849 4114 9.624697 TTGTTGTTGTATTGATCTTTAATCAGC 57.375 29.630 0.00 0.00 0.00 4.26
3932 4201 4.974275 GCTATGCTTATGTGCACTTTCATG 59.026 41.667 19.41 4.74 46.33 3.07
4003 4280 2.957402 TGGATGGAATATGGAGTGCC 57.043 50.000 0.00 0.00 0.00 5.01
4018 4295 3.129287 GGAGTGCCAGAATATTTGGTGTG 59.871 47.826 14.31 0.00 38.02 3.82
4162 4441 5.779529 ATTGAACATTGTTGCTGAGACTT 57.220 34.783 6.80 0.00 0.00 3.01
4164 4443 5.929697 TGAACATTGTTGCTGAGACTTAG 57.070 39.130 6.80 0.00 0.00 2.18
4235 4517 9.282247 CTGTTCCAGATTTTAATTTCTGAATCG 57.718 33.333 13.88 1.79 41.53 3.34
4269 4551 1.208614 CGCAGAGCTTTGTCCTTGC 59.791 57.895 6.08 0.00 0.00 4.01
4277 4559 2.818432 AGCTTTGTCCTTGCATCTGAAG 59.182 45.455 0.00 0.00 0.00 3.02
4449 4941 7.970614 AGAGATTTTTAGATTGCCAACGATTTC 59.029 33.333 0.00 0.00 0.00 2.17
4681 5206 3.857052 AGTGATTGAATTGCAATGCCAG 58.143 40.909 13.82 0.00 46.90 4.85
4682 5207 3.512329 AGTGATTGAATTGCAATGCCAGA 59.488 39.130 13.82 0.00 46.90 3.86
4683 5208 3.863424 GTGATTGAATTGCAATGCCAGAG 59.137 43.478 13.82 0.00 46.90 3.35
4684 5209 3.118920 TGATTGAATTGCAATGCCAGAGG 60.119 43.478 13.82 0.00 46.90 3.69
4685 5210 1.187974 TGAATTGCAATGCCAGAGGG 58.812 50.000 13.82 0.00 37.18 4.30
4707 5232 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
4708 5233 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
4709 5234 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
4710 5235 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
4711 5236 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
4712 5237 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
4713 5238 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
4714 5239 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
4715 5240 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
4716 5241 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
4717 5242 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
4718 5243 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
4719 5244 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
4720 5245 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
4721 5246 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
4722 5247 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
4723 5248 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
4724 5249 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
4725 5250 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
4726 5251 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
4727 5252 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
4728 5253 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
4729 5254 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
4730 5255 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
4731 5256 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
4732 5257 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
4733 5258 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
4734 5259 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
4735 5260 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
4736 5261 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
4737 5262 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
4738 5263 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
4739 5264 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
4740 5265 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
4741 5266 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
4742 5267 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
4743 5268 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
4744 5269 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
4755 5280 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
4756 5281 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
4757 5282 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
4758 5283 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
4759 5284 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
4760 5285 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
4761 5286 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
4762 5287 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
4763 5288 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
4764 5289 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
4765 5290 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
4766 5291 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
4767 5292 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
4768 5293 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
4778 5303 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
4779 5304 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
4780 5305 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
4781 5306 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
4782 5307 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
4783 5308 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
4784 5309 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
4785 5310 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
4786 5311 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
4787 5312 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
4788 5313 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
4789 5314 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
4790 5315 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
4791 5316 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
4792 5317 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
4793 5318 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
4794 5319 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
4795 5320 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
4796 5321 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
4797 5322 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
4798 5323 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
4799 5324 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
4800 5325 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
4801 5326 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
4802 5327 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
4803 5328 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
4804 5329 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
4805 5330 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
4806 5331 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
4807 5332 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
4808 5333 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
4809 5334 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
4810 5335 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
4812 5337 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
4813 5338 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
4814 5339 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
4815 5340 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
4816 5341 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
4817 5342 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
4818 5343 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
4825 5350 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
4826 5351 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
4827 5352 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
4828 5353 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
4829 5354 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
4830 5355 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
4831 5356 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
4832 5357 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
4833 5358 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
4834 5359 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
4835 5360 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
4836 5361 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
4837 5362 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
4838 5363 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
4839 5364 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
4840 5365 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
4841 5366 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
4842 5367 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
4843 5368 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
4844 5369 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
4845 5370 0.904649 CTATGCACTGGGTCTGTCCA 59.095 55.000 0.00 0.00 38.11 4.02
4846 5371 1.487976 CTATGCACTGGGTCTGTCCAT 59.512 52.381 0.00 0.00 36.05 3.41
4847 5372 0.700564 ATGCACTGGGTCTGTCCATT 59.299 50.000 0.00 0.00 36.05 3.16
4848 5373 0.250858 TGCACTGGGTCTGTCCATTG 60.251 55.000 0.00 0.00 39.55 2.82
4849 5374 0.036732 GCACTGGGTCTGTCCATTGA 59.963 55.000 11.73 0.00 39.08 2.57
4850 5375 1.545428 GCACTGGGTCTGTCCATTGAA 60.545 52.381 11.73 0.00 39.08 2.69
4851 5376 2.881403 GCACTGGGTCTGTCCATTGAAT 60.881 50.000 11.73 0.00 39.08 2.57
4852 5377 3.424703 CACTGGGTCTGTCCATTGAATT 58.575 45.455 0.00 0.00 39.08 2.17
4853 5378 3.192001 CACTGGGTCTGTCCATTGAATTG 59.808 47.826 0.00 0.00 39.08 2.32
4854 5379 2.165030 CTGGGTCTGTCCATTGAATTGC 59.835 50.000 0.00 0.00 36.05 3.56
4855 5380 2.170166 GGGTCTGTCCATTGAATTGCA 58.830 47.619 0.00 0.00 38.11 4.08
4856 5381 2.562298 GGGTCTGTCCATTGAATTGCAA 59.438 45.455 0.00 0.00 41.53 4.08
4905 5430 8.316214 AGATTTGAACCAACATATTTCATTGCT 58.684 29.630 0.00 0.00 0.00 3.91
4906 5431 9.585099 GATTTGAACCAACATATTTCATTGCTA 57.415 29.630 0.00 0.00 0.00 3.49
4907 5432 9.941325 ATTTGAACCAACATATTTCATTGCTAA 57.059 25.926 0.00 0.00 0.00 3.09
5000 5527 9.997482 TGTTACTAAACTTAACTTTGCTTCTTG 57.003 29.630 0.00 0.00 36.51 3.02
5189 5717 0.756294 TGAACGGCTGTGAAAGGAGA 59.244 50.000 0.00 0.00 0.00 3.71
5301 5832 4.223032 ACGTCATGGAAGTAGAAATCACCT 59.777 41.667 0.00 0.00 0.00 4.00
5305 5836 8.141909 CGTCATGGAAGTAGAAATCACCTTATA 58.858 37.037 0.00 0.00 0.00 0.98
5407 5938 2.126071 CGACGAAGATGGCGTGGT 60.126 61.111 0.00 0.00 42.77 4.16
5424 5955 0.037326 GGTGACCGATGCTCTTCACA 60.037 55.000 3.23 0.00 40.18 3.58
5433 5964 1.181741 TGCTCTTCACAGGCTCGAGT 61.182 55.000 15.13 0.00 0.00 4.18
5557 6088 1.969208 TGTTTGCATGCCCAATCTCAA 59.031 42.857 16.68 0.00 0.00 3.02
5563 6094 2.307768 CATGCCCAATCTCAAGAGCAT 58.692 47.619 0.00 0.00 41.40 3.79
5613 6144 2.739943 TCAGACCAGAACATCTCGGAT 58.260 47.619 0.00 0.00 0.00 4.18
5661 6192 0.443869 CAAAGATCTTGTCGGCCACG 59.556 55.000 9.17 0.00 42.74 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.668535 GCTCCCACCAACAAACTCAC 59.331 55.000 0.00 0.00 0.00 3.51
76 80 7.124298 TGGTCAAGTCACTAGCTATAGAAACAT 59.876 37.037 3.21 0.00 32.93 2.71
225 229 2.781681 ACACCCTGCTATGTACCAAC 57.218 50.000 0.00 0.00 0.00 3.77
236 240 6.371809 TCGATGAAATAATAAACACCCTGC 57.628 37.500 0.00 0.00 0.00 4.85
356 360 7.301789 TGGACATATGTTAATGTGTTTGTTCG 58.698 34.615 10.30 0.00 40.17 3.95
385 389 9.935682 TCTATAACATTTTTCTGAATCGAATGC 57.064 29.630 15.54 0.00 32.42 3.56
421 425 4.923415 AGATTCCTACAAACCAAAGGAGG 58.077 43.478 0.00 0.00 40.43 4.30
425 430 9.853177 ATCCTATAAGATTCCTACAAACCAAAG 57.147 33.333 0.00 0.00 0.00 2.77
463 468 8.724229 GCTTCAAAGAAAAATTTCCTATGCAAT 58.276 29.630 0.00 0.00 37.92 3.56
464 469 7.173047 GGCTTCAAAGAAAAATTTCCTATGCAA 59.827 33.333 0.00 0.00 37.92 4.08
465 470 6.650390 GGCTTCAAAGAAAAATTTCCTATGCA 59.350 34.615 2.37 0.00 37.92 3.96
466 471 6.092670 GGGCTTCAAAGAAAAATTTCCTATGC 59.907 38.462 2.37 1.41 37.92 3.14
467 472 7.389232 AGGGCTTCAAAGAAAAATTTCCTATG 58.611 34.615 2.37 0.80 37.92 2.23
468 473 7.559335 AGGGCTTCAAAGAAAAATTTCCTAT 57.441 32.000 2.37 0.00 37.92 2.57
475 483 5.372343 ACCAAAGGGCTTCAAAGAAAAAT 57.628 34.783 0.00 0.00 37.90 1.82
483 491 2.962421 CCTACAAACCAAAGGGCTTCAA 59.038 45.455 0.00 0.00 37.90 2.69
485 493 2.871453 TCCTACAAACCAAAGGGCTTC 58.129 47.619 0.00 0.00 37.90 3.86
486 494 3.322191 TTCCTACAAACCAAAGGGCTT 57.678 42.857 0.00 0.00 37.90 4.35
487 495 3.165071 CATTCCTACAAACCAAAGGGCT 58.835 45.455 0.00 0.00 37.90 5.19
489 497 6.358974 AATTCATTCCTACAAACCAAAGGG 57.641 37.500 0.00 0.00 41.29 3.95
532 627 8.066612 TCTCCAAAATGTAAAGGATTGATTCC 57.933 34.615 0.00 0.00 45.85 3.01
560 655 8.635765 TCCATTGAGTCTTAGCTAATGTTTTT 57.364 30.769 6.64 0.00 0.00 1.94
561 656 8.635765 TTCCATTGAGTCTTAGCTAATGTTTT 57.364 30.769 6.64 0.00 0.00 2.43
562 657 8.635765 TTTCCATTGAGTCTTAGCTAATGTTT 57.364 30.769 6.64 0.00 0.00 2.83
564 659 8.635765 TTTTTCCATTGAGTCTTAGCTAATGT 57.364 30.769 6.64 0.00 0.00 2.71
585 680 9.991906 CATTTGATGCATAGGATAGGAATTTTT 57.008 29.630 0.00 0.00 0.00 1.94
586 681 9.370930 TCATTTGATGCATAGGATAGGAATTTT 57.629 29.630 0.00 0.00 0.00 1.82
589 684 7.464273 TGTCATTTGATGCATAGGATAGGAAT 58.536 34.615 0.00 0.00 0.00 3.01
593 688 8.041919 AGAGATGTCATTTGATGCATAGGATAG 58.958 37.037 0.00 0.00 30.80 2.08
601 793 6.178324 AGAGAAAGAGATGTCATTTGATGCA 58.822 36.000 0.00 0.00 0.00 3.96
610 802 9.426534 TCAATTCCTATAGAGAAAGAGATGTCA 57.573 33.333 0.00 0.00 0.00 3.58
611 803 9.912634 CTCAATTCCTATAGAGAAAGAGATGTC 57.087 37.037 18.93 0.00 34.18 3.06
612 804 9.653516 TCTCAATTCCTATAGAGAAAGAGATGT 57.346 33.333 20.46 2.79 35.41 3.06
635 827 6.403866 AGGAAGTGAGATGACATGTATCTC 57.596 41.667 24.04 24.04 46.82 2.75
636 828 7.727634 TCATAGGAAGTGAGATGACATGTATCT 59.272 37.037 14.05 14.05 37.59 1.98
638 830 7.846101 TCATAGGAAGTGAGATGACATGTAT 57.154 36.000 0.00 0.00 0.00 2.29
639 831 7.846101 ATCATAGGAAGTGAGATGACATGTA 57.154 36.000 0.00 0.00 31.41 2.29
640 832 6.744175 ATCATAGGAAGTGAGATGACATGT 57.256 37.500 0.00 0.00 31.41 3.21
643 835 8.324306 AGAAAAATCATAGGAAGTGAGATGACA 58.676 33.333 0.00 0.00 31.41 3.58
649 841 9.844257 AGGAATAGAAAAATCATAGGAAGTGAG 57.156 33.333 0.00 0.00 0.00 3.51
671 863 9.832445 GTTCACAGGATAAGAATGTTATAGGAA 57.168 33.333 0.00 0.00 0.00 3.36
672 864 8.429641 GGTTCACAGGATAAGAATGTTATAGGA 58.570 37.037 0.00 0.00 0.00 2.94
673 865 8.210946 TGGTTCACAGGATAAGAATGTTATAGG 58.789 37.037 0.00 0.00 0.00 2.57
674 866 9.613428 TTGGTTCACAGGATAAGAATGTTATAG 57.387 33.333 0.00 0.00 0.00 1.31
675 867 9.967451 TTTGGTTCACAGGATAAGAATGTTATA 57.033 29.630 0.00 0.00 0.00 0.98
676 868 8.877864 TTTGGTTCACAGGATAAGAATGTTAT 57.122 30.769 0.00 0.00 0.00 1.89
677 869 7.393234 CCTTTGGTTCACAGGATAAGAATGTTA 59.607 37.037 0.00 0.00 33.52 2.41
678 870 6.209391 CCTTTGGTTCACAGGATAAGAATGTT 59.791 38.462 0.00 0.00 33.52 2.71
679 871 5.711976 CCTTTGGTTCACAGGATAAGAATGT 59.288 40.000 0.00 0.00 33.52 2.71
680 872 5.945784 TCCTTTGGTTCACAGGATAAGAATG 59.054 40.000 0.00 0.00 35.68 2.67
681 873 6.139679 TCCTTTGGTTCACAGGATAAGAAT 57.860 37.500 0.00 0.00 35.68 2.40
682 874 5.514834 CCTCCTTTGGTTCACAGGATAAGAA 60.515 44.000 3.61 0.00 39.26 2.52
683 875 4.019321 CCTCCTTTGGTTCACAGGATAAGA 60.019 45.833 3.61 0.00 39.26 2.10
684 876 4.265073 CCTCCTTTGGTTCACAGGATAAG 58.735 47.826 3.61 0.00 39.26 1.73
685 877 3.561313 GCCTCCTTTGGTTCACAGGATAA 60.561 47.826 3.61 0.00 39.26 1.75
686 878 2.026262 GCCTCCTTTGGTTCACAGGATA 60.026 50.000 3.61 0.00 39.26 2.59
687 879 1.272147 GCCTCCTTTGGTTCACAGGAT 60.272 52.381 3.61 0.00 39.26 3.24
688 880 0.110486 GCCTCCTTTGGTTCACAGGA 59.890 55.000 3.22 3.22 37.91 3.86
689 881 0.895559 GGCCTCCTTTGGTTCACAGG 60.896 60.000 0.00 0.00 33.03 4.00
690 882 0.111253 AGGCCTCCTTTGGTTCACAG 59.889 55.000 0.00 0.00 0.00 3.66
691 883 0.555769 AAGGCCTCCTTTGGTTCACA 59.444 50.000 5.23 0.00 41.69 3.58
692 884 2.160205 GTAAGGCCTCCTTTGGTTCAC 58.840 52.381 5.23 0.00 41.69 3.18
693 885 1.777878 TGTAAGGCCTCCTTTGGTTCA 59.222 47.619 5.23 0.00 41.69 3.18
694 886 2.224793 ACTGTAAGGCCTCCTTTGGTTC 60.225 50.000 5.23 0.00 41.69 3.62
695 887 1.780919 ACTGTAAGGCCTCCTTTGGTT 59.219 47.619 5.23 0.00 41.69 3.67
696 888 1.446016 ACTGTAAGGCCTCCTTTGGT 58.554 50.000 5.23 0.00 41.69 3.67
697 889 3.933861 ATACTGTAAGGCCTCCTTTGG 57.066 47.619 5.23 0.00 41.69 3.28
698 890 5.010282 ACAAATACTGTAAGGCCTCCTTTG 58.990 41.667 5.23 10.75 41.69 2.77
699 891 5.010282 CACAAATACTGTAAGGCCTCCTTT 58.990 41.667 5.23 0.00 44.25 3.11
700 892 4.288626 TCACAAATACTGTAAGGCCTCCTT 59.711 41.667 5.23 3.40 46.63 3.36
701 893 3.844211 TCACAAATACTGTAAGGCCTCCT 59.156 43.478 5.23 0.00 39.30 3.69
702 894 4.216411 TCACAAATACTGTAAGGCCTCC 57.784 45.455 5.23 0.00 39.30 4.30
703 895 4.395231 GGTTCACAAATACTGTAAGGCCTC 59.605 45.833 5.23 0.00 39.30 4.70
704 896 4.332828 GGTTCACAAATACTGTAAGGCCT 58.667 43.478 0.00 0.00 39.30 5.19
705 897 3.126343 CGGTTCACAAATACTGTAAGGCC 59.874 47.826 0.00 0.00 39.30 5.19
706 898 3.998341 TCGGTTCACAAATACTGTAAGGC 59.002 43.478 0.00 0.00 39.30 4.35
707 899 5.121768 CCTTCGGTTCACAAATACTGTAAGG 59.878 44.000 0.00 0.00 39.30 2.69
708 900 5.929992 TCCTTCGGTTCACAAATACTGTAAG 59.070 40.000 0.00 0.00 36.10 2.34
709 901 5.856156 TCCTTCGGTTCACAAATACTGTAA 58.144 37.500 0.00 0.00 36.10 2.41
710 902 5.011329 ACTCCTTCGGTTCACAAATACTGTA 59.989 40.000 0.00 0.00 36.10 2.74
711 903 4.202326 ACTCCTTCGGTTCACAAATACTGT 60.202 41.667 0.00 0.00 39.56 3.55
712 904 4.315803 ACTCCTTCGGTTCACAAATACTG 58.684 43.478 0.00 0.00 0.00 2.74
726 918 8.095792 TCTCCTTACTCAGTATATACTCCTTCG 58.904 40.741 12.62 1.89 33.46 3.79
750 950 9.959721 AACTCAGTTGTGGTATATACAAATTCT 57.040 29.630 14.70 4.66 39.50 2.40
753 953 7.829211 AGCAACTCAGTTGTGGTATATACAAAT 59.171 33.333 18.89 0.00 44.40 2.32
763 963 2.154462 GCATAGCAACTCAGTTGTGGT 58.846 47.619 18.89 2.84 44.40 4.16
764 964 2.153645 TGCATAGCAACTCAGTTGTGG 58.846 47.619 18.89 7.34 44.40 4.17
765 965 3.466712 CTGCATAGCAACTCAGTTGTG 57.533 47.619 18.89 10.45 44.40 3.33
792 992 8.621532 TGCATTACAGTTCTCTAAAAGATGTT 57.378 30.769 0.00 0.00 31.30 2.71
848 1070 3.109928 TGATGAGTGATGATCAGTGGGT 58.890 45.455 7.63 0.00 28.50 4.51
864 1086 4.002316 TGCATTTCGTCATGAACTGATGA 58.998 39.130 0.00 0.00 46.01 2.92
865 1087 4.345271 TGCATTTCGTCATGAACTGATG 57.655 40.909 0.00 1.62 39.03 3.07
866 1088 5.571784 ATTGCATTTCGTCATGAACTGAT 57.428 34.783 0.00 0.00 39.03 2.90
867 1089 4.435917 CGATTGCATTTCGTCATGAACTGA 60.436 41.667 0.00 0.00 39.03 3.41
868 1090 3.782369 CGATTGCATTTCGTCATGAACTG 59.218 43.478 0.00 0.00 39.53 3.16
869 1091 3.436704 ACGATTGCATTTCGTCATGAACT 59.563 39.130 16.75 0.00 46.13 3.01
910 1139 5.871524 GCATGTCAGTCAAGAACTCAAGATA 59.128 40.000 0.00 0.00 35.45 1.98
912 1141 4.060900 GCATGTCAGTCAAGAACTCAAGA 58.939 43.478 0.00 0.00 35.45 3.02
913 1142 3.811497 TGCATGTCAGTCAAGAACTCAAG 59.189 43.478 0.00 0.00 35.45 3.02
914 1143 3.807553 TGCATGTCAGTCAAGAACTCAA 58.192 40.909 0.00 0.00 35.45 3.02
915 1144 3.473923 TGCATGTCAGTCAAGAACTCA 57.526 42.857 0.00 0.00 35.45 3.41
916 1145 5.152097 CAATTGCATGTCAGTCAAGAACTC 58.848 41.667 0.00 0.00 35.45 3.01
917 1146 4.581824 ACAATTGCATGTCAGTCAAGAACT 59.418 37.500 5.05 0.00 39.44 3.01
918 1147 4.863491 ACAATTGCATGTCAGTCAAGAAC 58.137 39.130 5.05 0.00 0.00 3.01
919 1148 5.518848 AACAATTGCATGTCAGTCAAGAA 57.481 34.783 5.05 0.00 31.81 2.52
936 1165 5.053811 TGTTCTGTGTGTCATACGAACAAT 58.946 37.500 23.75 0.00 37.94 2.71
945 1174 3.244318 TGCTGATCTGTTCTGTGTGTCAT 60.244 43.478 1.27 0.00 0.00 3.06
947 1176 2.735663 CTGCTGATCTGTTCTGTGTGTC 59.264 50.000 1.27 0.00 0.00 3.67
948 1177 2.366590 TCTGCTGATCTGTTCTGTGTGT 59.633 45.455 1.27 0.00 0.00 3.72
1417 1651 3.541713 GAGCGCGAAGGGGAGGAT 61.542 66.667 12.10 0.00 42.39 3.24
1830 2064 0.179084 ACACCCGCATTACCTCATCG 60.179 55.000 0.00 0.00 0.00 3.84
1900 2134 1.663161 GCAAAACGCACTAACCAGAGC 60.663 52.381 0.00 0.00 41.79 4.09
1992 2226 0.974383 AGAACCCAAGGTACACTCCG 59.026 55.000 0.00 0.00 33.12 4.63
2284 2518 0.033109 GCAACAAATAGCCCCCTCCT 60.033 55.000 0.00 0.00 0.00 3.69
2289 2523 0.246360 GTGGTGCAACAAATAGCCCC 59.754 55.000 5.70 0.00 39.98 5.80
2367 2601 0.678950 AACCCCAAACATCCTTTGCG 59.321 50.000 0.00 0.00 0.00 4.85
2529 2763 4.021981 AGTCCCTTCATTAGCTTTGCAAAC 60.022 41.667 8.05 5.75 0.00 2.93
2727 2961 3.808834 TCTCTAGACTGACCCTGAACA 57.191 47.619 0.00 0.00 0.00 3.18
2977 3211 3.389329 GGCAGATGGACTTCAGATAGGAA 59.611 47.826 0.00 0.00 0.00 3.36
3134 3368 1.741706 CAACAAGCTAGGTCAGGCATG 59.258 52.381 0.00 0.00 34.03 4.06
3143 3377 1.896220 TCCAGTTGCAACAAGCTAGG 58.104 50.000 30.11 19.75 45.94 3.02
3371 3615 7.974504 AGATCAGACTTTTAAGTGGGTTTAGA 58.025 34.615 0.00 0.00 39.88 2.10
3417 3661 7.171508 TCAACTCTTCAATCACAGTGAACATAC 59.828 37.037 7.50 0.00 31.78 2.39
3584 3849 8.354711 TGATTAAATGTTAATACCAGCACCAA 57.645 30.769 0.00 0.00 0.00 3.67
3616 3881 2.452600 TGTTATGGAAATGAGGGGGC 57.547 50.000 0.00 0.00 0.00 5.80
3646 3911 9.243637 CTCTCTTAAAGATCAATACAGCAGTAC 57.756 37.037 0.00 0.00 32.19 2.73
3647 3912 9.190317 TCTCTCTTAAAGATCAATACAGCAGTA 57.810 33.333 0.00 0.00 32.19 2.74
3648 3913 7.978975 GTCTCTCTTAAAGATCAATACAGCAGT 59.021 37.037 0.00 0.00 32.19 4.40
3649 3914 7.437862 GGTCTCTCTTAAAGATCAATACAGCAG 59.562 40.741 0.00 0.00 32.19 4.24
3650 3915 7.124901 AGGTCTCTCTTAAAGATCAATACAGCA 59.875 37.037 0.00 0.00 32.19 4.41
3651 3916 7.437862 CAGGTCTCTCTTAAAGATCAATACAGC 59.562 40.741 0.00 0.00 32.19 4.40
3652 3917 8.690884 TCAGGTCTCTCTTAAAGATCAATACAG 58.309 37.037 0.00 0.00 32.19 2.74
3653 3918 8.595362 TCAGGTCTCTCTTAAAGATCAATACA 57.405 34.615 0.00 0.00 32.19 2.29
3654 3919 9.528018 CTTCAGGTCTCTCTTAAAGATCAATAC 57.472 37.037 0.00 0.00 32.19 1.89
3655 3920 8.700051 CCTTCAGGTCTCTCTTAAAGATCAATA 58.300 37.037 0.00 0.00 32.19 1.90
3656 3921 7.401493 TCCTTCAGGTCTCTCTTAAAGATCAAT 59.599 37.037 0.00 0.00 36.34 2.57
3657 3922 6.726299 TCCTTCAGGTCTCTCTTAAAGATCAA 59.274 38.462 0.00 0.00 36.34 2.57
3658 3923 6.256819 TCCTTCAGGTCTCTCTTAAAGATCA 58.743 40.000 0.00 0.00 36.34 2.92
3659 3924 6.783708 TCCTTCAGGTCTCTCTTAAAGATC 57.216 41.667 0.00 0.00 36.34 2.75
3660 3925 7.365473 CCAATCCTTCAGGTCTCTCTTAAAGAT 60.365 40.741 0.00 0.00 36.34 2.40
3661 3926 6.070538 CCAATCCTTCAGGTCTCTCTTAAAGA 60.071 42.308 0.00 0.00 36.34 2.52
3662 3927 6.070538 TCCAATCCTTCAGGTCTCTCTTAAAG 60.071 42.308 0.00 0.00 36.34 1.85
3663 3928 5.785423 TCCAATCCTTCAGGTCTCTCTTAAA 59.215 40.000 0.00 0.00 36.34 1.52
3664 3929 5.342017 TCCAATCCTTCAGGTCTCTCTTAA 58.658 41.667 0.00 0.00 36.34 1.85
3665 3930 4.947883 TCCAATCCTTCAGGTCTCTCTTA 58.052 43.478 0.00 0.00 36.34 2.10
3666 3931 3.774216 CTCCAATCCTTCAGGTCTCTCTT 59.226 47.826 0.00 0.00 36.34 2.85
3667 3932 3.245948 ACTCCAATCCTTCAGGTCTCTCT 60.246 47.826 0.00 0.00 36.34 3.10
3668 3933 3.103742 ACTCCAATCCTTCAGGTCTCTC 58.896 50.000 0.00 0.00 36.34 3.20
3669 3934 3.197927 ACTCCAATCCTTCAGGTCTCT 57.802 47.619 0.00 0.00 36.34 3.10
3670 3935 4.651503 TGATACTCCAATCCTTCAGGTCTC 59.348 45.833 0.00 0.00 36.34 3.36
3671 3936 4.407296 GTGATACTCCAATCCTTCAGGTCT 59.593 45.833 0.00 0.00 36.34 3.85
3672 3937 4.443598 GGTGATACTCCAATCCTTCAGGTC 60.444 50.000 0.00 0.00 36.34 3.85
3673 3938 3.456277 GGTGATACTCCAATCCTTCAGGT 59.544 47.826 0.00 0.00 36.34 4.00
3674 3939 3.455910 TGGTGATACTCCAATCCTTCAGG 59.544 47.826 0.00 0.00 31.50 3.86
3675 3940 4.760530 TGGTGATACTCCAATCCTTCAG 57.239 45.455 0.00 0.00 31.50 3.02
3676 3941 5.250543 TCTTTGGTGATACTCCAATCCTTCA 59.749 40.000 6.20 0.00 43.25 3.02
3677 3942 5.745227 TCTTTGGTGATACTCCAATCCTTC 58.255 41.667 6.20 0.00 43.25 3.46
3678 3943 5.779241 TCTTTGGTGATACTCCAATCCTT 57.221 39.130 6.20 0.00 43.25 3.36
3679 3944 5.251700 AGTTCTTTGGTGATACTCCAATCCT 59.748 40.000 6.20 0.00 43.25 3.24
3680 3945 5.501156 AGTTCTTTGGTGATACTCCAATCC 58.499 41.667 6.20 0.00 43.25 3.01
3681 3946 6.258947 GCTAGTTCTTTGGTGATACTCCAATC 59.741 42.308 6.20 0.00 43.25 2.67
3682 3947 6.069963 AGCTAGTTCTTTGGTGATACTCCAAT 60.070 38.462 6.20 0.00 43.25 3.16
3683 3948 5.248477 AGCTAGTTCTTTGGTGATACTCCAA 59.752 40.000 0.00 0.00 42.29 3.53
3684 3949 4.777896 AGCTAGTTCTTTGGTGATACTCCA 59.222 41.667 0.00 0.00 0.00 3.86
3685 3950 5.346181 AGCTAGTTCTTTGGTGATACTCC 57.654 43.478 0.00 0.00 0.00 3.85
3686 3951 6.926272 CCATAGCTAGTTCTTTGGTGATACTC 59.074 42.308 0.00 0.00 32.65 2.59
3687 3952 6.611642 TCCATAGCTAGTTCTTTGGTGATACT 59.388 38.462 8.33 0.00 36.79 2.12
3688 3953 6.702282 GTCCATAGCTAGTTCTTTGGTGATAC 59.298 42.308 8.33 0.00 36.79 2.24
3689 3954 6.382859 TGTCCATAGCTAGTTCTTTGGTGATA 59.617 38.462 8.33 0.00 36.79 2.15
3690 3955 5.189736 TGTCCATAGCTAGTTCTTTGGTGAT 59.810 40.000 8.33 0.00 36.79 3.06
3691 3956 4.530553 TGTCCATAGCTAGTTCTTTGGTGA 59.469 41.667 8.33 0.00 36.79 4.02
3692 3957 4.832248 TGTCCATAGCTAGTTCTTTGGTG 58.168 43.478 8.33 0.00 36.79 4.17
3693 3958 4.080863 CCTGTCCATAGCTAGTTCTTTGGT 60.081 45.833 8.33 0.00 36.79 3.67
3694 3959 4.446371 CCTGTCCATAGCTAGTTCTTTGG 58.554 47.826 0.00 0.65 36.78 3.28
3695 3960 4.446371 CCCTGTCCATAGCTAGTTCTTTG 58.554 47.826 0.00 0.00 0.00 2.77
3696 3961 3.456277 CCCCTGTCCATAGCTAGTTCTTT 59.544 47.826 0.00 0.00 0.00 2.52
3697 3962 3.041946 CCCCTGTCCATAGCTAGTTCTT 58.958 50.000 0.00 0.00 0.00 2.52
3698 3963 2.022918 ACCCCTGTCCATAGCTAGTTCT 60.023 50.000 0.00 0.00 0.00 3.01
3699 3964 2.103263 CACCCCTGTCCATAGCTAGTTC 59.897 54.545 0.00 0.00 0.00 3.01
3700 3965 2.119495 CACCCCTGTCCATAGCTAGTT 58.881 52.381 0.00 0.00 0.00 2.24
3701 3966 1.794714 CACCCCTGTCCATAGCTAGT 58.205 55.000 0.00 0.00 0.00 2.57
3702 3967 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
3703 3968 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
3704 3969 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
3705 3970 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
3706 3971 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
3707 3972 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
3708 3973 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
3710 3975 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
3711 3976 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
3712 3977 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
3713 3978 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
3714 3979 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
3715 3980 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
3716 3981 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
3717 3982 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
3718 3983 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
3719 3984 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
3720 3985 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
3721 3986 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
3722 3987 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
3723 3988 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
3724 3989 1.952296 CCACATGGATAGCAAGCTTCC 59.048 52.381 0.00 7.95 37.39 3.46
3725 3990 1.336125 GCCACATGGATAGCAAGCTTC 59.664 52.381 0.87 0.00 37.39 3.86
3726 3991 1.341285 TGCCACATGGATAGCAAGCTT 60.341 47.619 0.87 0.00 37.39 3.74
3727 3992 0.256752 TGCCACATGGATAGCAAGCT 59.743 50.000 0.87 0.00 37.39 3.74
3728 3993 0.666913 CTGCCACATGGATAGCAAGC 59.333 55.000 0.87 0.00 37.39 4.01
3729 3994 2.219458 CTCTGCCACATGGATAGCAAG 58.781 52.381 0.87 0.00 37.39 4.01
3730 3995 1.748244 GCTCTGCCACATGGATAGCAA 60.748 52.381 0.87 0.00 36.42 3.91
3731 3996 0.179037 GCTCTGCCACATGGATAGCA 60.179 55.000 0.87 0.00 36.42 3.49
3732 3997 2.626582 GCTCTGCCACATGGATAGC 58.373 57.895 0.87 3.11 37.39 2.97
3751 4016 1.202348 AGATCTCGCGACCAACTCATG 60.202 52.381 3.71 0.00 0.00 3.07
3752 4017 1.107114 AGATCTCGCGACCAACTCAT 58.893 50.000 3.71 0.00 0.00 2.90
3753 4018 0.888619 AAGATCTCGCGACCAACTCA 59.111 50.000 3.71 0.00 0.00 3.41
3754 4019 2.846039 TAAGATCTCGCGACCAACTC 57.154 50.000 3.71 0.00 0.00 3.01
3755 4020 2.223829 CCATAAGATCTCGCGACCAACT 60.224 50.000 3.71 0.00 0.00 3.16
3756 4021 2.128035 CCATAAGATCTCGCGACCAAC 58.872 52.381 3.71 0.00 0.00 3.77
3757 4022 1.068588 CCCATAAGATCTCGCGACCAA 59.931 52.381 3.71 0.00 0.00 3.67
3758 4023 0.673985 CCCATAAGATCTCGCGACCA 59.326 55.000 3.71 0.00 0.00 4.02
3759 4024 0.674534 ACCCATAAGATCTCGCGACC 59.325 55.000 3.71 0.00 0.00 4.79
3760 4025 2.510768 AACCCATAAGATCTCGCGAC 57.489 50.000 3.71 0.00 0.00 5.19
3761 4026 2.429250 TGAAACCCATAAGATCTCGCGA 59.571 45.455 9.26 9.26 0.00 5.87
3762 4027 2.540101 GTGAAACCCATAAGATCTCGCG 59.460 50.000 0.00 0.00 0.00 5.87
3777 4042 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
3778 4043 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
3779 4044 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
3780 4045 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
3781 4046 1.807814 ATTGGGGTAGGCTAGAGGTG 58.192 55.000 0.00 0.00 0.00 4.00
3782 4047 2.509964 CAAATTGGGGTAGGCTAGAGGT 59.490 50.000 0.00 0.00 0.00 3.85
3783 4048 2.509964 ACAAATTGGGGTAGGCTAGAGG 59.490 50.000 0.00 0.00 0.00 3.69
3784 4049 3.933861 ACAAATTGGGGTAGGCTAGAG 57.066 47.619 0.00 0.00 0.00 2.43
3785 4050 4.340617 CAAACAAATTGGGGTAGGCTAGA 58.659 43.478 0.00 0.00 35.27 2.43
3786 4051 4.718940 CAAACAAATTGGGGTAGGCTAG 57.281 45.455 0.00 0.00 35.27 3.42
3797 4062 5.213891 AGCCTTTAGTCCCAAACAAATTG 57.786 39.130 0.00 0.00 38.84 2.32
3798 4063 5.887214 AAGCCTTTAGTCCCAAACAAATT 57.113 34.783 0.00 0.00 0.00 1.82
3799 4064 5.130311 ACAAAGCCTTTAGTCCCAAACAAAT 59.870 36.000 0.00 0.00 0.00 2.32
3800 4065 4.468153 ACAAAGCCTTTAGTCCCAAACAAA 59.532 37.500 0.00 0.00 0.00 2.83
3801 4066 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
3802 4067 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
3803 4068 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
3804 4069 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
3805 4070 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
3806 4071 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
3807 4072 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
3808 4073 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
3809 4074 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
3810 4075 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
3811 4076 7.704472 TCAATACAACAACAACAAAGCCTTTAG 59.296 33.333 0.00 0.00 0.00 1.85
3812 4077 7.548097 TCAATACAACAACAACAAAGCCTTTA 58.452 30.769 0.00 0.00 0.00 1.85
3813 4078 6.402222 TCAATACAACAACAACAAAGCCTTT 58.598 32.000 0.00 0.00 0.00 3.11
3814 4079 5.971763 TCAATACAACAACAACAAAGCCTT 58.028 33.333 0.00 0.00 0.00 4.35
3815 4080 5.590530 TCAATACAACAACAACAAAGCCT 57.409 34.783 0.00 0.00 0.00 4.58
3816 4081 6.215845 AGATCAATACAACAACAACAAAGCC 58.784 36.000 0.00 0.00 0.00 4.35
3817 4082 7.698836 AAGATCAATACAACAACAACAAAGC 57.301 32.000 0.00 0.00 0.00 3.51
3823 4088 9.624697 GCTGATTAAAGATCAATACAACAACAA 57.375 29.630 0.00 0.00 0.00 2.83
3824 4089 9.013229 AGCTGATTAAAGATCAATACAACAACA 57.987 29.630 0.00 0.00 0.00 3.33
3825 4090 9.282247 CAGCTGATTAAAGATCAATACAACAAC 57.718 33.333 8.42 0.00 0.00 3.32
3826 4091 7.970061 GCAGCTGATTAAAGATCAATACAACAA 59.030 33.333 20.43 0.00 0.00 2.83
3829 4094 7.121020 TGTGCAGCTGATTAAAGATCAATACAA 59.879 33.333 20.43 0.00 0.00 2.41
3849 4114 3.316308 AGCTCAAAAGGTTTAGTGTGCAG 59.684 43.478 0.00 0.00 33.94 4.41
3932 4201 3.366374 GGATAAAGCACAAGCACCAGTTC 60.366 47.826 0.00 0.00 45.49 3.01
4003 4280 5.587388 ATTGCCTCACACCAAATATTCTG 57.413 39.130 0.00 0.00 0.00 3.02
4164 4443 8.924303 TGAGATGCCTGTATATATATTGGTACC 58.076 37.037 4.43 4.43 0.00 3.34
4235 4517 4.149747 GCTCTGCGTTAGAAGCATAAGATC 59.850 45.833 5.35 0.00 44.26 2.75
4414 4710 9.547753 GGCAATCTAAAAATCTCTATGTAGTCA 57.452 33.333 0.00 0.00 0.00 3.41
4449 4941 4.118410 CTCTAGCTTGATACAACCAGCAG 58.882 47.826 0.00 0.00 0.00 4.24
4690 5215 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
4691 5216 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
4692 5217 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
4693 5218 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
4694 5219 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
4695 5220 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
4696 5221 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
4702 5227 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
4703 5228 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
4704 5229 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
4705 5230 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
4706 5231 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
4707 5232 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
4708 5233 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
4719 5244 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
4720 5245 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
4721 5246 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
4722 5247 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
4723 5248 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
4724 5249 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
4725 5250 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
4726 5251 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
4727 5252 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
4728 5253 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
4737 5262 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
4738 5263 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
4739 5264 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
4740 5265 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
4741 5266 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
4742 5267 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
4743 5268 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
4744 5269 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
4746 5271 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
4747 5272 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
4748 5273 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
4749 5274 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
4760 5285 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
4761 5286 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
4762 5287 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
4763 5288 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
4764 5289 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
4765 5290 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
4766 5291 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
4767 5292 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
4768 5293 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
4769 5294 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
4770 5295 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
4771 5296 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
4772 5297 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
4773 5298 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
4774 5299 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
4775 5300 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
4776 5301 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
4777 5302 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
4778 5303 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
4779 5304 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
4780 5305 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
4781 5306 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
4782 5307 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
4783 5308 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
4784 5309 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
4785 5310 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
4786 5311 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
4787 5312 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
4788 5313 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
4789 5314 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
4790 5315 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
4791 5316 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
4792 5317 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
4793 5318 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
4795 5320 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
4796 5321 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
4797 5322 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
4798 5323 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
4799 5324 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
4800 5325 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
4801 5326 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
4809 5334 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
4810 5335 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
4811 5336 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
4812 5337 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
4813 5338 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
4814 5339 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
4815 5340 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
4816 5341 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
4817 5342 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
4818 5343 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
4819 5344 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
4820 5345 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
4821 5346 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
4822 5347 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
4823 5348 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
4824 5349 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
4825 5350 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
4826 5351 0.904649 TGGACAGACCCAGTGCATAG 59.095 55.000 0.00 0.00 38.00 2.23
4827 5352 1.583556 ATGGACAGACCCAGTGCATA 58.416 50.000 0.00 0.00 44.61 3.14
4828 5353 2.391226 ATGGACAGACCCAGTGCAT 58.609 52.632 0.00 0.00 42.19 3.96
4829 5354 0.250858 CAATGGACAGACCCAGTGCA 60.251 55.000 0.00 0.00 43.90 4.57
4830 5355 2.559785 CAATGGACAGACCCAGTGC 58.440 57.895 0.00 0.00 43.90 4.40
4832 5357 3.424703 CAATTCAATGGACAGACCCAGT 58.575 45.455 0.00 0.00 39.97 4.00
4833 5358 2.165030 GCAATTCAATGGACAGACCCAG 59.835 50.000 0.00 0.00 39.97 4.45
4834 5359 2.170166 GCAATTCAATGGACAGACCCA 58.830 47.619 0.00 0.00 41.05 4.51
4835 5360 2.170166 TGCAATTCAATGGACAGACCC 58.830 47.619 0.00 0.00 38.00 4.46
4836 5361 3.940209 TTGCAATTCAATGGACAGACC 57.060 42.857 0.00 0.00 39.54 3.85
4845 5370 5.941058 TCTTGATTTGGCATTGCAATTCAAT 59.059 32.000 17.76 10.61 45.82 2.57
4846 5371 5.306394 TCTTGATTTGGCATTGCAATTCAA 58.694 33.333 9.83 14.41 39.32 2.69
4847 5372 4.895961 TCTTGATTTGGCATTGCAATTCA 58.104 34.783 9.83 7.18 0.00 2.57
4848 5373 5.410439 ACTTCTTGATTTGGCATTGCAATTC 59.590 36.000 9.83 4.56 0.00 2.17
4849 5374 5.180492 CACTTCTTGATTTGGCATTGCAATT 59.820 36.000 9.83 0.00 0.00 2.32
4850 5375 4.693566 CACTTCTTGATTTGGCATTGCAAT 59.306 37.500 5.99 5.99 0.00 3.56
4851 5376 4.059511 CACTTCTTGATTTGGCATTGCAA 58.940 39.130 11.39 0.00 0.00 4.08
4852 5377 3.555377 CCACTTCTTGATTTGGCATTGCA 60.555 43.478 11.39 0.00 0.00 4.08
4853 5378 2.997986 CCACTTCTTGATTTGGCATTGC 59.002 45.455 0.00 0.00 0.00 3.56
4854 5379 4.524316 TCCACTTCTTGATTTGGCATTG 57.476 40.909 0.00 0.00 0.00 2.82
4855 5380 4.562143 GCTTCCACTTCTTGATTTGGCATT 60.562 41.667 0.00 0.00 0.00 3.56
4856 5381 3.056322 GCTTCCACTTCTTGATTTGGCAT 60.056 43.478 0.00 0.00 0.00 4.40
4857 5382 2.297033 GCTTCCACTTCTTGATTTGGCA 59.703 45.455 0.00 0.00 0.00 4.92
4858 5383 2.297033 TGCTTCCACTTCTTGATTTGGC 59.703 45.455 0.00 0.00 0.00 4.52
4859 5384 3.822735 TCTGCTTCCACTTCTTGATTTGG 59.177 43.478 0.00 0.00 0.00 3.28
4860 5385 5.640189 ATCTGCTTCCACTTCTTGATTTG 57.360 39.130 0.00 0.00 0.00 2.32
4861 5386 6.266103 TCAAATCTGCTTCCACTTCTTGATTT 59.734 34.615 0.00 0.00 34.51 2.17
4905 5430 6.731919 TGTTCTTCCCTAACTCCCACTTATTA 59.268 38.462 0.00 0.00 0.00 0.98
4906 5431 5.550403 TGTTCTTCCCTAACTCCCACTTATT 59.450 40.000 0.00 0.00 0.00 1.40
4907 5432 5.045797 GTGTTCTTCCCTAACTCCCACTTAT 60.046 44.000 0.00 0.00 0.00 1.73
4993 5520 0.529378 CCCATGTTCAGGCAAGAAGC 59.471 55.000 0.00 0.00 44.65 3.86
4994 5521 2.205022 TCCCATGTTCAGGCAAGAAG 57.795 50.000 0.00 0.00 0.00 2.85
4996 5523 2.173356 CCTATCCCATGTTCAGGCAAGA 59.827 50.000 0.00 0.00 0.00 3.02
4997 5524 2.579873 CCTATCCCATGTTCAGGCAAG 58.420 52.381 0.00 0.00 0.00 4.01
4999 5526 0.846015 CCCTATCCCATGTTCAGGCA 59.154 55.000 0.00 0.00 0.00 4.75
5000 5527 1.140312 TCCCTATCCCATGTTCAGGC 58.860 55.000 0.00 0.00 0.00 4.85
5189 5717 1.610673 ACACGGAGGGATGCTGACT 60.611 57.895 0.00 0.00 0.00 3.41
5407 5938 0.247460 CCTGTGAAGAGCATCGGTCA 59.753 55.000 0.00 0.00 42.67 4.02
5424 5955 2.754658 CGGGGTGTACTCGAGCCT 60.755 66.667 13.61 0.00 0.00 4.58
5433 5964 0.038166 ACGACTCTAACCGGGGTGTA 59.962 55.000 6.32 0.00 0.00 2.90
5557 6088 1.067084 CCGACGATGCTCATGCTCT 59.933 57.895 0.00 0.00 40.48 4.09
5563 6094 1.079197 ATGTTGCCGACGATGCTCA 60.079 52.632 0.00 0.00 0.00 4.26
5613 6144 0.036388 GGCTGTTCTCCGTTGATCCA 60.036 55.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.