Multiple sequence alignment - TraesCS4A01G255100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G255100 chr4A 100.000 2270 0 0 1 2270 567194136 567191867 0.000000e+00 4193.0
1 TraesCS4A01G255100 chr4A 85.149 1414 168 15 250 1622 704227683 704229095 0.000000e+00 1410.0
2 TraesCS4A01G255100 chr4A 82.318 1674 218 30 28 1625 704253845 704255516 0.000000e+00 1380.0
3 TraesCS4A01G255100 chr4A 92.857 42 2 1 1983 2023 215023400 215023441 2.440000e-05 60.2
4 TraesCS4A01G255100 chr1D 87.304 1654 164 21 2 1628 373422828 373424462 0.000000e+00 1849.0
5 TraesCS4A01G255100 chr1D 85.049 1331 145 19 358 1637 406166323 406167650 0.000000e+00 1306.0
6 TraesCS4A01G255100 chr1D 80.983 1709 234 38 1 1628 486901380 486899682 0.000000e+00 1271.0
7 TraesCS4A01G255100 chr7B 86.988 1660 177 17 1 1626 59624869 59623215 0.000000e+00 1832.0
8 TraesCS4A01G255100 chr7B 86.023 1667 184 13 1 1628 498252656 498251000 0.000000e+00 1742.0
9 TraesCS4A01G255100 chr7B 84.713 942 117 14 1 934 598163477 598162555 0.000000e+00 917.0
10 TraesCS4A01G255100 chr1A 86.783 1604 178 16 1 1581 501063354 501064946 0.000000e+00 1757.0
11 TraesCS4A01G255100 chr6B 85.903 1667 193 15 1 1626 121523065 121521400 0.000000e+00 1738.0
12 TraesCS4A01G255100 chr6B 97.260 365 10 0 1906 2270 80163801 80163437 8.910000e-174 619.0
13 TraesCS4A01G255100 chr3B 84.707 1674 172 28 1 1628 76428300 76429935 0.000000e+00 1596.0
14 TraesCS4A01G255100 chr3B 91.304 46 3 1 1983 2028 382310561 382310605 6.770000e-06 62.1
15 TraesCS4A01G255100 chr1B 85.988 1513 182 19 137 1628 589984511 589983008 0.000000e+00 1592.0
16 TraesCS4A01G255100 chr1B 87.160 1028 110 6 300 1306 619088564 619089590 0.000000e+00 1147.0
17 TraesCS4A01G255100 chr1B 87.182 866 95 10 3 858 522648612 522649471 0.000000e+00 970.0
18 TraesCS4A01G255100 chr4D 87.464 1388 143 15 257 1628 349583617 349582245 0.000000e+00 1570.0
19 TraesCS4A01G255100 chr4D 83.857 223 22 6 1635 1856 35589241 35589032 1.380000e-47 200.0
20 TraesCS4A01G255100 chr4D 90.385 52 2 3 1936 1986 400703108 400703059 5.230000e-07 65.8
21 TraesCS4A01G255100 chr4D 100.000 31 0 0 1937 1967 282615138 282615108 8.760000e-05 58.4
22 TraesCS4A01G255100 chr4D 100.000 30 0 0 1939 1968 263874615 263874586 3.150000e-04 56.5
23 TraesCS4A01G255100 chr2B 87.801 1205 111 17 1 1173 654644932 654646132 0.000000e+00 1378.0
24 TraesCS4A01G255100 chr2B 87.635 1205 114 16 1 1173 654695000 654696201 0.000000e+00 1367.0
25 TraesCS4A01G255100 chr2B 87.635 1205 111 17 1 1173 654717011 654718209 0.000000e+00 1365.0
26 TraesCS4A01G255100 chr2B 92.857 42 2 1 1983 2023 150538421 150538380 2.440000e-05 60.2
27 TraesCS4A01G255100 chr2A 86.041 1268 163 11 1 1259 51915946 51917208 0.000000e+00 1349.0
28 TraesCS4A01G255100 chr2A 92.857 42 2 1 1979 2019 164926137 164926178 2.440000e-05 60.2
29 TraesCS4A01G255100 chr2A 89.796 49 2 3 1979 2026 603543267 603543221 2.440000e-05 60.2
30 TraesCS4A01G255100 chr6A 86.620 1151 137 7 491 1628 404452707 404451561 0.000000e+00 1256.0
31 TraesCS4A01G255100 chr6A 97.534 365 9 0 1906 2270 602737747 602737383 1.910000e-175 625.0
32 TraesCS4A01G255100 chr6A 93.023 43 2 1 1936 1977 497998123 497998165 6.770000e-06 62.1
33 TraesCS4A01G255100 chr3D 85.944 1117 132 10 526 1628 328520093 328521198 0.000000e+00 1170.0
34 TraesCS4A01G255100 chr3D 97.297 37 0 1 1937 1972 203975146 203975110 6.770000e-06 62.1
35 TraesCS4A01G255100 chr5D 88.735 941 98 3 1 934 424111512 424112451 0.000000e+00 1144.0
36 TraesCS4A01G255100 chr5D 92.857 42 2 1 1983 2023 340957670 340957629 2.440000e-05 60.2
37 TraesCS4A01G255100 chr6D 84.970 672 89 3 977 1637 303198954 303199624 0.000000e+00 671.0
38 TraesCS4A01G255100 chr5B 97.534 365 9 0 1906 2270 425344820 425345184 1.910000e-175 625.0
39 TraesCS4A01G255100 chr7D 85.830 247 33 2 2024 2269 134165594 134165349 6.220000e-66 261.0
40 TraesCS4A01G255100 chr2D 97.059 34 0 1 1940 1972 541207356 541207323 3.150000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G255100 chr4A 567191867 567194136 2269 True 4193 4193 100.000 1 2270 1 chr4A.!!$R1 2269
1 TraesCS4A01G255100 chr4A 704227683 704229095 1412 False 1410 1410 85.149 250 1622 1 chr4A.!!$F2 1372
2 TraesCS4A01G255100 chr4A 704253845 704255516 1671 False 1380 1380 82.318 28 1625 1 chr4A.!!$F3 1597
3 TraesCS4A01G255100 chr1D 373422828 373424462 1634 False 1849 1849 87.304 2 1628 1 chr1D.!!$F1 1626
4 TraesCS4A01G255100 chr1D 406166323 406167650 1327 False 1306 1306 85.049 358 1637 1 chr1D.!!$F2 1279
5 TraesCS4A01G255100 chr1D 486899682 486901380 1698 True 1271 1271 80.983 1 1628 1 chr1D.!!$R1 1627
6 TraesCS4A01G255100 chr7B 59623215 59624869 1654 True 1832 1832 86.988 1 1626 1 chr7B.!!$R1 1625
7 TraesCS4A01G255100 chr7B 498251000 498252656 1656 True 1742 1742 86.023 1 1628 1 chr7B.!!$R2 1627
8 TraesCS4A01G255100 chr7B 598162555 598163477 922 True 917 917 84.713 1 934 1 chr7B.!!$R3 933
9 TraesCS4A01G255100 chr1A 501063354 501064946 1592 False 1757 1757 86.783 1 1581 1 chr1A.!!$F1 1580
10 TraesCS4A01G255100 chr6B 121521400 121523065 1665 True 1738 1738 85.903 1 1626 1 chr6B.!!$R2 1625
11 TraesCS4A01G255100 chr3B 76428300 76429935 1635 False 1596 1596 84.707 1 1628 1 chr3B.!!$F1 1627
12 TraesCS4A01G255100 chr1B 589983008 589984511 1503 True 1592 1592 85.988 137 1628 1 chr1B.!!$R1 1491
13 TraesCS4A01G255100 chr1B 619088564 619089590 1026 False 1147 1147 87.160 300 1306 1 chr1B.!!$F2 1006
14 TraesCS4A01G255100 chr1B 522648612 522649471 859 False 970 970 87.182 3 858 1 chr1B.!!$F1 855
15 TraesCS4A01G255100 chr4D 349582245 349583617 1372 True 1570 1570 87.464 257 1628 1 chr4D.!!$R4 1371
16 TraesCS4A01G255100 chr2B 654644932 654646132 1200 False 1378 1378 87.801 1 1173 1 chr2B.!!$F1 1172
17 TraesCS4A01G255100 chr2B 654695000 654696201 1201 False 1367 1367 87.635 1 1173 1 chr2B.!!$F2 1172
18 TraesCS4A01G255100 chr2B 654717011 654718209 1198 False 1365 1365 87.635 1 1173 1 chr2B.!!$F3 1172
19 TraesCS4A01G255100 chr2A 51915946 51917208 1262 False 1349 1349 86.041 1 1259 1 chr2A.!!$F1 1258
20 TraesCS4A01G255100 chr6A 404451561 404452707 1146 True 1256 1256 86.620 491 1628 1 chr6A.!!$R1 1137
21 TraesCS4A01G255100 chr3D 328520093 328521198 1105 False 1170 1170 85.944 526 1628 1 chr3D.!!$F1 1102
22 TraesCS4A01G255100 chr5D 424111512 424112451 939 False 1144 1144 88.735 1 934 1 chr5D.!!$F1 933
23 TraesCS4A01G255100 chr6D 303198954 303199624 670 False 671 671 84.970 977 1637 1 chr6D.!!$F1 660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 141 0.171455 CCTTGGTCTTCGTCTCCTCG 59.829 60.0 0.0 0.0 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2036 2276 0.035915 GAAGGAGGACTGCTGGAACC 60.036 60.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.123928 ATGAGGTTCCAGATCCGGAC 58.876 55.000 6.12 0.11 33.75 4.79
38 40 5.301045 CCGGACTGAGTACAATAGTAATGGA 59.699 44.000 0.00 0.00 30.67 3.41
124 126 2.359975 CGGGTGGCCTTGGTCTTC 60.360 66.667 3.32 0.00 0.00 2.87
129 131 0.670854 GTGGCCTTGGTCTTCGTCTC 60.671 60.000 3.32 0.00 0.00 3.36
133 141 0.171455 CCTTGGTCTTCGTCTCCTCG 59.829 60.000 0.00 0.00 0.00 4.63
144 164 2.887568 CTCCTCGTGCACCATCGC 60.888 66.667 12.15 0.00 0.00 4.58
171 191 1.987855 CCTCGTTGGAGCCCACCTA 60.988 63.158 0.00 0.00 39.06 3.08
342 393 0.978907 TTGCTCTCTGTCCAGCATCA 59.021 50.000 0.00 0.00 45.03 3.07
416 468 0.690192 TTCGCTGGGTCAGGAATCAA 59.310 50.000 0.00 0.00 31.21 2.57
430 482 4.397417 CAGGAATCAATGTCTTCAACTCCC 59.603 45.833 0.00 0.00 0.00 4.30
456 508 1.947456 GTCACCTTCTTGACCACAACC 59.053 52.381 0.00 0.00 40.15 3.77
478 530 1.799403 CTGACTCTTTGTGCAGCTCTG 59.201 52.381 0.00 0.00 0.00 3.35
686 808 3.820119 GCAAGGTGGGTTAATAAAGGGGT 60.820 47.826 0.00 0.00 0.00 4.95
693 815 4.474287 TGGGTTAATAAAGGGGTACACGAT 59.526 41.667 0.00 0.00 0.00 3.73
783 908 2.423926 ATGCAGATCGACACGGATAC 57.576 50.000 0.00 0.00 0.00 2.24
790 915 1.143183 CGACACGGATACCAAGGGG 59.857 63.158 0.00 0.00 41.29 4.79
794 919 1.200519 CACGGATACCAAGGGGAAGA 58.799 55.000 0.00 0.00 38.05 2.87
820 945 0.461548 TGCCATCGAAGGAGCAGTAG 59.538 55.000 11.67 0.00 0.00 2.57
824 949 2.302260 CATCGAAGGAGCAGTAGAGGA 58.698 52.381 0.00 0.00 0.00 3.71
934 1114 0.743097 GTCGGAACTACGGCCACTAT 59.257 55.000 2.24 0.00 31.09 2.12
936 1116 0.317603 CGGAACTACGGCCACTATCG 60.318 60.000 2.24 0.00 0.00 2.92
963 1143 1.002011 GAGGGCCAACCACCTTCTC 60.002 63.158 6.18 0.00 43.89 2.87
1051 1244 0.318699 CGTGTCGCAGGAGTTCAAGA 60.319 55.000 0.00 0.00 0.00 3.02
1397 1623 7.033791 GCTTAGTACTACTATGTTCTGTTGCA 58.966 38.462 0.91 0.00 29.64 4.08
1414 1652 3.632643 TGCATGTGCTCTTCCTGATAA 57.367 42.857 6.55 0.00 42.66 1.75
1433 1671 2.325082 CGCTGTGTGCTGGTAACCC 61.325 63.158 0.00 0.00 40.11 4.11
1442 1680 3.405923 TGGTAACCCCACCATCGG 58.594 61.111 0.00 0.00 43.76 4.18
1467 1705 4.401519 CCGAGGAGGTTATTAGACAACAGA 59.598 45.833 0.00 0.00 34.51 3.41
1488 1726 3.682766 TTGCATGCAACCAAACAGG 57.317 47.368 28.80 0.00 45.67 4.00
1512 1750 0.656205 CTTGTGTTTGCGCGTACACC 60.656 55.000 29.96 18.34 43.04 4.16
1587 1826 8.848182 ACTAAATACGGACAACCAAACAAATTA 58.152 29.630 0.00 0.00 35.59 1.40
1601 1840 8.239998 ACCAAACAAATTACAAATGTTGGTTTG 58.760 29.630 9.31 9.31 43.11 2.93
1632 1872 2.291856 GCTCAACCAGCCTCCTAGT 58.708 57.895 0.00 0.00 43.17 2.57
1633 1873 0.107945 GCTCAACCAGCCTCCTAGTG 60.108 60.000 0.00 0.00 43.17 2.74
1634 1874 0.107945 CTCAACCAGCCTCCTAGTGC 60.108 60.000 0.00 0.00 0.00 4.40
1636 1876 1.538876 AACCAGCCTCCTAGTGCCA 60.539 57.895 0.00 0.00 0.00 4.92
1637 1877 0.916358 AACCAGCCTCCTAGTGCCAT 60.916 55.000 0.00 0.00 0.00 4.40
1638 1878 1.341156 ACCAGCCTCCTAGTGCCATC 61.341 60.000 0.00 0.00 0.00 3.51
1639 1879 1.340399 CCAGCCTCCTAGTGCCATCA 61.340 60.000 0.00 0.00 0.00 3.07
1640 1880 0.543277 CAGCCTCCTAGTGCCATCAA 59.457 55.000 0.00 0.00 0.00 2.57
1641 1881 1.142465 CAGCCTCCTAGTGCCATCAAT 59.858 52.381 0.00 0.00 0.00 2.57
1642 1882 1.849039 AGCCTCCTAGTGCCATCAATT 59.151 47.619 0.00 0.00 0.00 2.32
1643 1883 2.243221 AGCCTCCTAGTGCCATCAATTT 59.757 45.455 0.00 0.00 0.00 1.82
1644 1884 2.620585 GCCTCCTAGTGCCATCAATTTC 59.379 50.000 0.00 0.00 0.00 2.17
1645 1885 3.686691 GCCTCCTAGTGCCATCAATTTCT 60.687 47.826 0.00 0.00 0.00 2.52
1646 1886 4.133078 CCTCCTAGTGCCATCAATTTCTC 58.867 47.826 0.00 0.00 0.00 2.87
1647 1887 3.797039 TCCTAGTGCCATCAATTTCTCG 58.203 45.455 0.00 0.00 0.00 4.04
1648 1888 3.197766 TCCTAGTGCCATCAATTTCTCGT 59.802 43.478 0.00 0.00 0.00 4.18
1649 1889 3.310774 CCTAGTGCCATCAATTTCTCGTG 59.689 47.826 0.00 0.00 0.00 4.35
1650 1890 1.470098 AGTGCCATCAATTTCTCGTGC 59.530 47.619 0.00 0.00 0.00 5.34
1651 1891 1.199789 GTGCCATCAATTTCTCGTGCA 59.800 47.619 0.00 0.00 0.00 4.57
1652 1892 2.093890 TGCCATCAATTTCTCGTGCAT 58.906 42.857 0.00 0.00 0.00 3.96
1653 1893 2.159352 TGCCATCAATTTCTCGTGCATG 60.159 45.455 0.00 0.00 0.00 4.06
1654 1894 2.097954 GCCATCAATTTCTCGTGCATGA 59.902 45.455 8.64 8.64 0.00 3.07
1655 1895 3.688272 CCATCAATTTCTCGTGCATGAC 58.312 45.455 3.97 0.00 0.00 3.06
1656 1896 3.127376 CCATCAATTTCTCGTGCATGACA 59.873 43.478 3.97 0.00 0.00 3.58
1657 1897 4.379708 CCATCAATTTCTCGTGCATGACAA 60.380 41.667 3.97 0.00 0.00 3.18
1658 1898 5.337554 CATCAATTTCTCGTGCATGACAAT 58.662 37.500 3.97 3.75 0.00 2.71
1659 1899 4.973396 TCAATTTCTCGTGCATGACAATC 58.027 39.130 3.97 0.00 0.00 2.67
1660 1900 4.100529 CAATTTCTCGTGCATGACAATCC 58.899 43.478 3.97 0.00 0.00 3.01
1661 1901 2.470983 TTCTCGTGCATGACAATCCA 57.529 45.000 3.97 0.00 0.00 3.41
1662 1902 2.696989 TCTCGTGCATGACAATCCAT 57.303 45.000 3.97 0.00 0.00 3.41
1663 1903 3.817709 TCTCGTGCATGACAATCCATA 57.182 42.857 3.97 0.00 0.00 2.74
1664 1904 3.457234 TCTCGTGCATGACAATCCATAC 58.543 45.455 3.97 0.00 0.00 2.39
1665 1905 3.132824 TCTCGTGCATGACAATCCATACT 59.867 43.478 3.97 0.00 0.00 2.12
1666 1906 3.457234 TCGTGCATGACAATCCATACTC 58.543 45.455 3.97 0.00 0.00 2.59
1667 1907 2.219445 CGTGCATGACAATCCATACTCG 59.781 50.000 0.00 0.00 0.00 4.18
1668 1908 2.032549 GTGCATGACAATCCATACTCGC 60.033 50.000 0.00 0.00 0.00 5.03
1669 1909 2.212652 GCATGACAATCCATACTCGCA 58.787 47.619 0.00 0.00 0.00 5.10
1670 1910 2.613595 GCATGACAATCCATACTCGCAA 59.386 45.455 0.00 0.00 0.00 4.85
1671 1911 3.303593 GCATGACAATCCATACTCGCAAG 60.304 47.826 0.00 0.00 0.00 4.01
1701 1941 1.332195 AAAGGGACAAGCTGGAAAGC 58.668 50.000 0.00 0.00 0.00 3.51
1702 1942 0.185901 AAGGGACAAGCTGGAAAGCA 59.814 50.000 0.00 0.00 37.25 3.91
1703 1943 0.185901 AGGGACAAGCTGGAAAGCAA 59.814 50.000 0.00 0.00 37.25 3.91
1704 1944 1.039856 GGGACAAGCTGGAAAGCAAA 58.960 50.000 0.00 0.00 37.25 3.68
1705 1945 1.412343 GGGACAAGCTGGAAAGCAAAA 59.588 47.619 0.00 0.00 37.25 2.44
1706 1946 2.037641 GGGACAAGCTGGAAAGCAAAAT 59.962 45.455 0.00 0.00 37.25 1.82
1707 1947 3.062042 GGACAAGCTGGAAAGCAAAATG 58.938 45.455 0.00 0.00 37.25 2.32
1708 1948 3.062042 GACAAGCTGGAAAGCAAAATGG 58.938 45.455 0.00 0.00 37.25 3.16
1709 1949 1.802365 CAAGCTGGAAAGCAAAATGGC 59.198 47.619 0.00 0.00 37.25 4.40
1710 1950 0.037975 AGCTGGAAAGCAAAATGGCG 60.038 50.000 0.00 0.00 39.27 5.69
1711 1951 0.038343 GCTGGAAAGCAAAATGGCGA 60.038 50.000 0.00 0.00 39.27 5.54
1712 1952 1.404583 GCTGGAAAGCAAAATGGCGAT 60.405 47.619 0.00 0.00 39.27 4.58
1713 1953 2.264813 CTGGAAAGCAAAATGGCGATG 58.735 47.619 0.00 0.00 39.27 3.84
1714 1954 1.001624 GGAAAGCAAAATGGCGATGC 58.998 50.000 0.00 0.00 40.34 3.91
1718 1958 2.877396 GCAAAATGGCGATGCTAGC 58.123 52.632 8.10 8.10 37.12 3.42
1719 1959 0.383231 GCAAAATGGCGATGCTAGCT 59.617 50.000 17.23 0.83 37.12 3.32
1720 1960 1.862815 GCAAAATGGCGATGCTAGCTG 60.863 52.381 17.23 7.04 37.12 4.24
1721 1961 1.672363 CAAAATGGCGATGCTAGCTGA 59.328 47.619 17.23 0.00 34.52 4.26
1722 1962 2.267174 AAATGGCGATGCTAGCTGAT 57.733 45.000 17.23 1.03 34.52 2.90
1723 1963 1.805869 AATGGCGATGCTAGCTGATC 58.194 50.000 17.23 10.48 34.52 2.92
1724 1964 0.036577 ATGGCGATGCTAGCTGATCC 60.037 55.000 17.23 12.25 34.52 3.36
1725 1965 1.117749 TGGCGATGCTAGCTGATCCT 61.118 55.000 17.23 0.00 34.52 3.24
1726 1966 0.669932 GGCGATGCTAGCTGATCCTG 60.670 60.000 17.23 1.39 34.52 3.86
1727 1967 0.316522 GCGATGCTAGCTGATCCTGA 59.683 55.000 17.23 0.00 0.00 3.86
1728 1968 1.934399 GCGATGCTAGCTGATCCTGAC 60.934 57.143 17.23 0.00 0.00 3.51
1729 1969 1.339291 CGATGCTAGCTGATCCTGACA 59.661 52.381 17.23 0.00 0.00 3.58
1730 1970 2.607526 CGATGCTAGCTGATCCTGACAG 60.608 54.545 17.23 0.00 38.27 3.51
1736 1976 3.149899 CTGATCCTGACAGCACCAC 57.850 57.895 0.00 0.00 0.00 4.16
1737 1977 0.322648 CTGATCCTGACAGCACCACA 59.677 55.000 0.00 0.00 0.00 4.17
1738 1978 0.322648 TGATCCTGACAGCACCACAG 59.677 55.000 0.00 0.00 0.00 3.66
1739 1979 1.002868 ATCCTGACAGCACCACAGC 60.003 57.895 0.00 0.00 0.00 4.40
1740 1980 1.771783 ATCCTGACAGCACCACAGCA 61.772 55.000 0.00 0.00 36.85 4.41
1741 1981 2.256591 CCTGACAGCACCACAGCAC 61.257 63.158 0.00 0.00 36.85 4.40
1742 1982 2.588596 TGACAGCACCACAGCACG 60.589 61.111 0.00 0.00 36.85 5.34
1743 1983 2.588877 GACAGCACCACAGCACGT 60.589 61.111 0.00 0.00 36.85 4.49
1744 1984 2.885676 GACAGCACCACAGCACGTG 61.886 63.158 12.28 12.28 45.92 4.49
1745 1985 2.896854 CAGCACCACAGCACGTGT 60.897 61.111 18.38 0.68 44.78 4.49
1746 1986 2.124736 AGCACCACAGCACGTGTT 60.125 55.556 18.38 8.60 44.78 3.32
1747 1987 2.180204 AGCACCACAGCACGTGTTC 61.180 57.895 18.38 0.57 44.78 3.18
1748 1988 2.180204 GCACCACAGCACGTGTTCT 61.180 57.895 18.38 3.34 44.78 3.01
1749 1989 1.643292 CACCACAGCACGTGTTCTG 59.357 57.895 18.38 18.25 44.78 3.02
1750 1990 2.180204 ACCACAGCACGTGTTCTGC 61.180 57.895 18.38 1.48 44.78 4.26
1751 1991 2.633657 CACAGCACGTGTTCTGCC 59.366 61.111 18.38 0.00 41.03 4.85
1752 1992 1.889105 CACAGCACGTGTTCTGCCT 60.889 57.895 18.38 0.88 41.03 4.75
1753 1993 1.153168 ACAGCACGTGTTCTGCCTT 60.153 52.632 18.38 0.00 34.94 4.35
1754 1994 0.748005 ACAGCACGTGTTCTGCCTTT 60.748 50.000 18.38 0.00 34.94 3.11
1755 1995 0.381801 CAGCACGTGTTCTGCCTTTT 59.618 50.000 18.38 0.00 35.01 2.27
1756 1996 0.663153 AGCACGTGTTCTGCCTTTTC 59.337 50.000 18.38 0.00 35.01 2.29
1757 1997 0.663153 GCACGTGTTCTGCCTTTTCT 59.337 50.000 18.38 0.00 0.00 2.52
1758 1998 1.871039 GCACGTGTTCTGCCTTTTCTA 59.129 47.619 18.38 0.00 0.00 2.10
1759 1999 2.349532 GCACGTGTTCTGCCTTTTCTAC 60.350 50.000 18.38 0.00 0.00 2.59
1760 2000 3.131396 CACGTGTTCTGCCTTTTCTACT 58.869 45.455 7.58 0.00 0.00 2.57
1761 2001 3.059597 CACGTGTTCTGCCTTTTCTACTG 60.060 47.826 7.58 0.00 0.00 2.74
1762 2002 2.096218 CGTGTTCTGCCTTTTCTACTGC 60.096 50.000 0.00 0.00 0.00 4.40
1763 2003 3.142174 GTGTTCTGCCTTTTCTACTGCT 58.858 45.455 0.00 0.00 0.00 4.24
1764 2004 3.058639 GTGTTCTGCCTTTTCTACTGCTG 60.059 47.826 0.00 0.00 0.00 4.41
1765 2005 1.813513 TCTGCCTTTTCTACTGCTGC 58.186 50.000 0.00 0.00 0.00 5.25
1766 2006 1.349026 TCTGCCTTTTCTACTGCTGCT 59.651 47.619 0.00 0.00 0.00 4.24
1767 2007 2.567169 TCTGCCTTTTCTACTGCTGCTA 59.433 45.455 0.00 0.00 0.00 3.49
1768 2008 3.007940 TCTGCCTTTTCTACTGCTGCTAA 59.992 43.478 0.00 0.00 0.00 3.09
1769 2009 3.750371 TGCCTTTTCTACTGCTGCTAAA 58.250 40.909 0.00 0.00 0.00 1.85
1770 2010 3.502211 TGCCTTTTCTACTGCTGCTAAAC 59.498 43.478 0.00 0.00 0.00 2.01
1771 2011 3.753797 GCCTTTTCTACTGCTGCTAAACT 59.246 43.478 0.00 0.00 0.00 2.66
1772 2012 4.378874 GCCTTTTCTACTGCTGCTAAACTG 60.379 45.833 0.00 0.00 0.00 3.16
1773 2013 4.757149 CCTTTTCTACTGCTGCTAAACTGT 59.243 41.667 0.00 0.00 0.00 3.55
1774 2014 5.239525 CCTTTTCTACTGCTGCTAAACTGTT 59.760 40.000 0.00 0.00 0.00 3.16
1775 2015 6.238759 CCTTTTCTACTGCTGCTAAACTGTTT 60.239 38.462 10.98 10.98 0.00 2.83
1776 2016 6.693315 TTTCTACTGCTGCTAAACTGTTTT 57.307 33.333 11.48 0.00 0.00 2.43
1777 2017 5.673337 TCTACTGCTGCTAAACTGTTTTG 57.327 39.130 11.48 10.55 0.00 2.44
1778 2018 5.123227 TCTACTGCTGCTAAACTGTTTTGT 58.877 37.500 11.48 3.06 0.00 2.83
1779 2019 4.292977 ACTGCTGCTAAACTGTTTTGTC 57.707 40.909 11.48 6.64 0.00 3.18
1780 2020 3.947834 ACTGCTGCTAAACTGTTTTGTCT 59.052 39.130 11.48 0.00 0.00 3.41
1781 2021 4.399303 ACTGCTGCTAAACTGTTTTGTCTT 59.601 37.500 11.48 0.00 0.00 3.01
1782 2022 4.671377 TGCTGCTAAACTGTTTTGTCTTG 58.329 39.130 11.48 3.38 0.00 3.02
1783 2023 3.487207 GCTGCTAAACTGTTTTGTCTTGC 59.513 43.478 11.48 8.72 0.00 4.01
1784 2024 4.671377 CTGCTAAACTGTTTTGTCTTGCA 58.329 39.130 11.48 10.90 0.00 4.08
1785 2025 4.671377 TGCTAAACTGTTTTGTCTTGCAG 58.329 39.130 11.48 1.37 35.31 4.41
1786 2026 4.157656 TGCTAAACTGTTTTGTCTTGCAGT 59.842 37.500 11.48 0.00 43.13 4.40
1787 2027 5.355630 TGCTAAACTGTTTTGTCTTGCAGTA 59.644 36.000 11.48 0.00 40.79 2.74
1788 2028 6.127869 TGCTAAACTGTTTTGTCTTGCAGTAA 60.128 34.615 11.48 0.00 40.79 2.24
1789 2029 6.750039 GCTAAACTGTTTTGTCTTGCAGTAAA 59.250 34.615 11.48 0.00 40.79 2.01
1790 2030 7.435192 GCTAAACTGTTTTGTCTTGCAGTAAAT 59.565 33.333 11.48 0.00 40.79 1.40
1791 2031 9.301153 CTAAACTGTTTTGTCTTGCAGTAAATT 57.699 29.630 11.48 0.00 40.79 1.82
1792 2032 7.524294 AACTGTTTTGTCTTGCAGTAAATTG 57.476 32.000 0.00 0.00 40.79 2.32
1793 2033 5.519927 ACTGTTTTGTCTTGCAGTAAATTGC 59.480 36.000 0.00 0.00 44.33 3.56
1794 2034 4.808364 TGTTTTGTCTTGCAGTAAATTGCC 59.192 37.500 0.00 0.00 43.43 4.52
1795 2035 4.662468 TTTGTCTTGCAGTAAATTGCCA 57.338 36.364 0.00 0.00 43.43 4.92
1796 2036 3.641437 TGTCTTGCAGTAAATTGCCAC 57.359 42.857 0.00 0.00 43.43 5.01
1797 2037 3.221771 TGTCTTGCAGTAAATTGCCACT 58.778 40.909 0.00 0.00 43.43 4.00
1798 2038 4.393834 TGTCTTGCAGTAAATTGCCACTA 58.606 39.130 0.00 0.00 43.43 2.74
1799 2039 4.215399 TGTCTTGCAGTAAATTGCCACTAC 59.785 41.667 0.00 0.00 43.43 2.73
1800 2040 4.455877 GTCTTGCAGTAAATTGCCACTACT 59.544 41.667 0.00 0.00 43.43 2.57
1801 2041 4.695455 TCTTGCAGTAAATTGCCACTACTC 59.305 41.667 0.00 0.00 43.43 2.59
1802 2042 3.343617 TGCAGTAAATTGCCACTACTCC 58.656 45.455 0.00 0.00 43.43 3.85
1803 2043 2.683362 GCAGTAAATTGCCACTACTCCC 59.317 50.000 0.00 0.00 38.13 4.30
1804 2044 3.279434 CAGTAAATTGCCACTACTCCCC 58.721 50.000 0.00 0.00 0.00 4.81
1805 2045 2.241430 AGTAAATTGCCACTACTCCCCC 59.759 50.000 0.00 0.00 0.00 5.40
1828 2068 8.609617 CCCCCTAAGAAAATTAAATCCTTTCT 57.390 34.615 0.00 0.00 40.31 2.52
1829 2069 9.046846 CCCCCTAAGAAAATTAAATCCTTTCTT 57.953 33.333 12.22 12.22 46.16 2.52
1830 2070 9.875691 CCCCTAAGAAAATTAAATCCTTTCTTG 57.124 33.333 15.71 8.26 44.83 3.02
1831 2071 9.371136 CCCTAAGAAAATTAAATCCTTTCTTGC 57.629 33.333 15.71 0.00 44.83 4.01
1832 2072 9.927668 CCTAAGAAAATTAAATCCTTTCTTGCA 57.072 29.630 15.71 0.00 44.83 4.08
1835 2075 9.836864 AAGAAAATTAAATCCTTTCTTGCAAGT 57.163 25.926 25.19 6.75 44.01 3.16
1840 2080 9.643693 AATTAAATCCTTTCTTGCAAGTACATG 57.356 29.630 25.19 11.82 0.00 3.21
1841 2081 6.655078 AAATCCTTTCTTGCAAGTACATGT 57.345 33.333 25.19 2.69 0.00 3.21
1842 2082 7.759489 AAATCCTTTCTTGCAAGTACATGTA 57.241 32.000 25.19 0.08 0.00 2.29
1843 2083 7.759489 AATCCTTTCTTGCAAGTACATGTAA 57.241 32.000 25.19 8.28 0.00 2.41
1844 2084 6.554334 TCCTTTCTTGCAAGTACATGTAAC 57.446 37.500 25.19 2.37 0.00 2.50
1845 2085 6.058833 TCCTTTCTTGCAAGTACATGTAACA 58.941 36.000 25.19 1.22 0.00 2.41
1846 2086 6.714810 TCCTTTCTTGCAAGTACATGTAACAT 59.285 34.615 25.19 0.00 0.00 2.71
1847 2087 7.230510 TCCTTTCTTGCAAGTACATGTAACATT 59.769 33.333 25.19 0.32 0.00 2.71
1848 2088 7.867403 CCTTTCTTGCAAGTACATGTAACATTT 59.133 33.333 25.19 0.00 0.00 2.32
1849 2089 8.795786 TTTCTTGCAAGTACATGTAACATTTC 57.204 30.769 25.19 0.00 0.00 2.17
1850 2090 6.598525 TCTTGCAAGTACATGTAACATTTCG 58.401 36.000 25.19 0.00 0.00 3.46
1851 2091 4.717991 TGCAAGTACATGTAACATTTCGC 58.282 39.130 7.25 4.68 0.00 4.70
1852 2092 4.095610 GCAAGTACATGTAACATTTCGCC 58.904 43.478 7.25 0.00 0.00 5.54
1853 2093 4.142687 GCAAGTACATGTAACATTTCGCCT 60.143 41.667 7.25 0.00 0.00 5.52
1854 2094 5.560148 CAAGTACATGTAACATTTCGCCTC 58.440 41.667 7.25 0.00 0.00 4.70
1855 2095 4.827692 AGTACATGTAACATTTCGCCTCA 58.172 39.130 7.25 0.00 0.00 3.86
1856 2096 5.428253 AGTACATGTAACATTTCGCCTCAT 58.572 37.500 7.25 0.00 0.00 2.90
1857 2097 6.578944 AGTACATGTAACATTTCGCCTCATA 58.421 36.000 7.25 0.00 0.00 2.15
1858 2098 7.217200 AGTACATGTAACATTTCGCCTCATAT 58.783 34.615 7.25 0.00 0.00 1.78
1859 2099 6.942532 ACATGTAACATTTCGCCTCATATT 57.057 33.333 0.00 0.00 0.00 1.28
1860 2100 6.728200 ACATGTAACATTTCGCCTCATATTG 58.272 36.000 0.00 0.00 0.00 1.90
1861 2101 6.318648 ACATGTAACATTTCGCCTCATATTGT 59.681 34.615 0.00 0.00 0.00 2.71
1862 2102 6.358118 TGTAACATTTCGCCTCATATTGTC 57.642 37.500 0.00 0.00 0.00 3.18
1863 2103 4.900635 AACATTTCGCCTCATATTGTCC 57.099 40.909 0.00 0.00 0.00 4.02
1864 2104 3.214328 ACATTTCGCCTCATATTGTCCC 58.786 45.455 0.00 0.00 0.00 4.46
1865 2105 3.213506 CATTTCGCCTCATATTGTCCCA 58.786 45.455 0.00 0.00 0.00 4.37
1866 2106 3.358111 TTTCGCCTCATATTGTCCCAA 57.642 42.857 0.00 0.00 0.00 4.12
1867 2107 3.358111 TTCGCCTCATATTGTCCCAAA 57.642 42.857 0.00 0.00 0.00 3.28
1868 2108 3.576078 TCGCCTCATATTGTCCCAAAT 57.424 42.857 0.00 0.00 0.00 2.32
1869 2109 3.897239 TCGCCTCATATTGTCCCAAATT 58.103 40.909 0.00 0.00 0.00 1.82
1870 2110 5.042463 TCGCCTCATATTGTCCCAAATTA 57.958 39.130 0.00 0.00 0.00 1.40
1871 2111 5.063204 TCGCCTCATATTGTCCCAAATTAG 58.937 41.667 0.00 0.00 0.00 1.73
1872 2112 4.216257 CGCCTCATATTGTCCCAAATTAGG 59.784 45.833 0.00 0.00 0.00 2.69
1873 2113 5.385198 GCCTCATATTGTCCCAAATTAGGA 58.615 41.667 0.00 0.00 0.00 2.94
1874 2114 5.474876 GCCTCATATTGTCCCAAATTAGGAG 59.525 44.000 0.00 0.00 32.84 3.69
1875 2115 6.691491 GCCTCATATTGTCCCAAATTAGGAGA 60.691 42.308 0.00 0.00 32.84 3.71
1876 2116 7.465116 CCTCATATTGTCCCAAATTAGGAGAT 58.535 38.462 0.00 0.00 32.84 2.75
1877 2117 7.392673 CCTCATATTGTCCCAAATTAGGAGATG 59.607 40.741 0.00 1.55 32.84 2.90
1878 2118 6.716628 TCATATTGTCCCAAATTAGGAGATGC 59.283 38.462 0.00 0.00 32.84 3.91
1879 2119 3.297134 TGTCCCAAATTAGGAGATGCC 57.703 47.619 0.00 0.00 32.84 4.40
1880 2120 2.091885 TGTCCCAAATTAGGAGATGCCC 60.092 50.000 0.00 0.00 37.37 5.36
1881 2121 2.175715 GTCCCAAATTAGGAGATGCCCT 59.824 50.000 0.00 0.00 40.29 5.19
1882 2122 2.858768 TCCCAAATTAGGAGATGCCCTT 59.141 45.455 0.00 0.00 37.74 3.95
1883 2123 4.051478 TCCCAAATTAGGAGATGCCCTTA 58.949 43.478 0.00 0.00 37.74 2.69
1884 2124 4.669768 TCCCAAATTAGGAGATGCCCTTAT 59.330 41.667 0.00 0.00 37.74 1.73
1885 2125 5.012893 CCCAAATTAGGAGATGCCCTTATC 58.987 45.833 0.00 0.00 37.74 1.75
1886 2126 5.458069 CCCAAATTAGGAGATGCCCTTATCA 60.458 44.000 0.00 0.00 37.74 2.15
1887 2127 6.070656 CCAAATTAGGAGATGCCCTTATCAA 58.929 40.000 0.00 0.00 37.74 2.57
1888 2128 6.723052 CCAAATTAGGAGATGCCCTTATCAAT 59.277 38.462 0.00 0.00 37.74 2.57
1889 2129 7.234166 CCAAATTAGGAGATGCCCTTATCAATT 59.766 37.037 0.00 0.00 37.74 2.32
1890 2130 9.300681 CAAATTAGGAGATGCCCTTATCAATTA 57.699 33.333 0.00 0.00 37.74 1.40
1891 2131 9.881773 AAATTAGGAGATGCCCTTATCAATTAA 57.118 29.630 0.00 0.00 37.74 1.40
1892 2132 8.870075 ATTAGGAGATGCCCTTATCAATTAAC 57.130 34.615 0.00 0.00 37.74 2.01
1893 2133 6.521527 AGGAGATGCCCTTATCAATTAACT 57.478 37.500 0.00 0.00 37.37 2.24
1894 2134 6.915786 AGGAGATGCCCTTATCAATTAACTT 58.084 36.000 0.00 0.00 37.37 2.66
1895 2135 6.774656 AGGAGATGCCCTTATCAATTAACTTG 59.225 38.462 0.00 0.00 37.37 3.16
1896 2136 6.015940 GGAGATGCCCTTATCAATTAACTTGG 60.016 42.308 0.00 0.00 35.43 3.61
1897 2137 6.435164 AGATGCCCTTATCAATTAACTTGGT 58.565 36.000 0.00 0.00 35.43 3.67
1898 2138 5.913137 TGCCCTTATCAATTAACTTGGTG 57.087 39.130 0.00 0.00 35.43 4.17
1899 2139 5.575157 TGCCCTTATCAATTAACTTGGTGA 58.425 37.500 0.00 0.00 35.43 4.02
1900 2140 5.417580 TGCCCTTATCAATTAACTTGGTGAC 59.582 40.000 0.00 0.00 35.43 3.67
1901 2141 5.652452 GCCCTTATCAATTAACTTGGTGACT 59.348 40.000 0.00 0.00 35.43 3.41
1902 2142 6.183360 GCCCTTATCAATTAACTTGGTGACTC 60.183 42.308 0.00 0.00 35.43 3.36
1903 2143 7.112779 CCCTTATCAATTAACTTGGTGACTCT 58.887 38.462 0.00 0.00 35.43 3.24
1904 2144 7.281100 CCCTTATCAATTAACTTGGTGACTCTC 59.719 40.741 0.00 0.00 35.43 3.20
1905 2145 7.281100 CCTTATCAATTAACTTGGTGACTCTCC 59.719 40.741 0.00 0.00 35.43 3.71
1906 2146 5.825593 TCAATTAACTTGGTGACTCTCCT 57.174 39.130 0.00 0.00 35.43 3.69
1907 2147 5.794894 TCAATTAACTTGGTGACTCTCCTC 58.205 41.667 0.00 0.00 35.43 3.71
1908 2148 5.544176 TCAATTAACTTGGTGACTCTCCTCT 59.456 40.000 0.00 0.00 35.43 3.69
1909 2149 6.043243 TCAATTAACTTGGTGACTCTCCTCTT 59.957 38.462 0.00 0.00 35.43 2.85
1910 2150 5.888982 TTAACTTGGTGACTCTCCTCTTT 57.111 39.130 0.00 0.00 0.00 2.52
1911 2151 4.344359 AACTTGGTGACTCTCCTCTTTC 57.656 45.455 0.00 0.00 0.00 2.62
1912 2152 2.635427 ACTTGGTGACTCTCCTCTTTCC 59.365 50.000 0.00 0.00 0.00 3.13
1913 2153 1.645710 TGGTGACTCTCCTCTTTCCC 58.354 55.000 0.00 0.00 0.00 3.97
1914 2154 1.132849 TGGTGACTCTCCTCTTTCCCA 60.133 52.381 0.00 0.00 0.00 4.37
1915 2155 1.552792 GGTGACTCTCCTCTTTCCCAG 59.447 57.143 0.00 0.00 0.00 4.45
1916 2156 1.066502 GTGACTCTCCTCTTTCCCAGC 60.067 57.143 0.00 0.00 0.00 4.85
1917 2157 0.174617 GACTCTCCTCTTTCCCAGCG 59.825 60.000 0.00 0.00 0.00 5.18
1918 2158 1.153469 CTCTCCTCTTTCCCAGCGC 60.153 63.158 0.00 0.00 0.00 5.92
1919 2159 1.610673 TCTCCTCTTTCCCAGCGCT 60.611 57.895 2.64 2.64 0.00 5.92
1920 2160 1.153469 CTCCTCTTTCCCAGCGCTC 60.153 63.158 7.13 0.00 0.00 5.03
1921 2161 1.610673 TCCTCTTTCCCAGCGCTCT 60.611 57.895 7.13 0.00 0.00 4.09
1922 2162 1.153469 CCTCTTTCCCAGCGCTCTC 60.153 63.158 7.13 0.00 0.00 3.20
1923 2163 1.612395 CCTCTTTCCCAGCGCTCTCT 61.612 60.000 7.13 0.00 0.00 3.10
1924 2164 0.248843 CTCTTTCCCAGCGCTCTCTT 59.751 55.000 7.13 0.00 0.00 2.85
1925 2165 0.247736 TCTTTCCCAGCGCTCTCTTC 59.752 55.000 7.13 0.00 0.00 2.87
1926 2166 0.742635 CTTTCCCAGCGCTCTCTTCC 60.743 60.000 7.13 0.00 0.00 3.46
1927 2167 2.185310 TTTCCCAGCGCTCTCTTCCC 62.185 60.000 7.13 0.00 0.00 3.97
1928 2168 4.168291 CCCAGCGCTCTCTTCCCC 62.168 72.222 7.13 0.00 0.00 4.81
1929 2169 3.393970 CCAGCGCTCTCTTCCCCA 61.394 66.667 7.13 0.00 0.00 4.96
1930 2170 2.186384 CAGCGCTCTCTTCCCCAG 59.814 66.667 7.13 0.00 0.00 4.45
1931 2171 3.780173 AGCGCTCTCTTCCCCAGC 61.780 66.667 2.64 0.00 0.00 4.85
1932 2172 4.847444 GCGCTCTCTTCCCCAGCC 62.847 72.222 0.00 0.00 0.00 4.85
1933 2173 3.080121 CGCTCTCTTCCCCAGCCT 61.080 66.667 0.00 0.00 0.00 4.58
1934 2174 2.588989 GCTCTCTTCCCCAGCCTG 59.411 66.667 0.00 0.00 0.00 4.85
1935 2175 2.588989 CTCTCTTCCCCAGCCTGC 59.411 66.667 0.00 0.00 0.00 4.85
1936 2176 3.011517 TCTCTTCCCCAGCCTGCC 61.012 66.667 0.00 0.00 0.00 4.85
1937 2177 4.479993 CTCTTCCCCAGCCTGCCG 62.480 72.222 0.00 0.00 0.00 5.69
1973 2213 3.827898 CCGGCGTCCACCTCTCTC 61.828 72.222 6.01 0.00 0.00 3.20
1974 2214 2.752238 CGGCGTCCACCTCTCTCT 60.752 66.667 0.00 0.00 0.00 3.10
1975 2215 2.766400 CGGCGTCCACCTCTCTCTC 61.766 68.421 0.00 0.00 0.00 3.20
1976 2216 1.379309 GGCGTCCACCTCTCTCTCT 60.379 63.158 0.00 0.00 0.00 3.10
1977 2217 1.381165 GGCGTCCACCTCTCTCTCTC 61.381 65.000 0.00 0.00 0.00 3.20
1978 2218 1.381165 GCGTCCACCTCTCTCTCTCC 61.381 65.000 0.00 0.00 0.00 3.71
1979 2219 0.750182 CGTCCACCTCTCTCTCTCCC 60.750 65.000 0.00 0.00 0.00 4.30
1980 2220 0.396556 GTCCACCTCTCTCTCTCCCC 60.397 65.000 0.00 0.00 0.00 4.81
1981 2221 0.553862 TCCACCTCTCTCTCTCCCCT 60.554 60.000 0.00 0.00 0.00 4.79
1982 2222 0.106217 CCACCTCTCTCTCTCCCCTC 60.106 65.000 0.00 0.00 0.00 4.30
1983 2223 0.106217 CACCTCTCTCTCTCCCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
1984 2224 1.150536 CCTCTCTCTCTCCCCTCCG 59.849 68.421 0.00 0.00 0.00 4.63
1985 2225 1.528309 CTCTCTCTCTCCCCTCCGC 60.528 68.421 0.00 0.00 0.00 5.54
1986 2226 2.520741 CTCTCTCTCCCCTCCGCC 60.521 72.222 0.00 0.00 0.00 6.13
1987 2227 4.507916 TCTCTCTCCCCTCCGCCG 62.508 72.222 0.00 0.00 0.00 6.46
2021 2261 4.452733 CGGCGTCCACCTTCCCTC 62.453 72.222 0.00 0.00 0.00 4.30
2022 2262 4.097361 GGCGTCCACCTTCCCTCC 62.097 72.222 0.00 0.00 0.00 4.30
2023 2263 4.452733 GCGTCCACCTTCCCTCCG 62.453 72.222 0.00 0.00 0.00 4.63
2024 2264 3.771160 CGTCCACCTTCCCTCCGG 61.771 72.222 0.00 0.00 0.00 5.14
2025 2265 4.097361 GTCCACCTTCCCTCCGGC 62.097 72.222 0.00 0.00 0.00 6.13
2028 2268 3.411517 CACCTTCCCTCCGGCCAT 61.412 66.667 2.24 0.00 0.00 4.40
2029 2269 3.411517 ACCTTCCCTCCGGCCATG 61.412 66.667 2.24 0.00 0.00 3.66
2030 2270 4.195334 CCTTCCCTCCGGCCATGG 62.195 72.222 7.63 7.63 0.00 3.66
2031 2271 4.883354 CTTCCCTCCGGCCATGGC 62.883 72.222 29.47 29.47 41.06 4.40
2042 2282 4.402528 CCATGGCGTCCGGTTCCA 62.403 66.667 12.88 12.88 0.00 3.53
2043 2283 2.819595 CATGGCGTCCGGTTCCAG 60.820 66.667 15.06 6.43 32.78 3.86
2044 2284 4.778143 ATGGCGTCCGGTTCCAGC 62.778 66.667 15.06 8.84 32.78 4.85
2047 2287 4.681978 GCGTCCGGTTCCAGCAGT 62.682 66.667 0.00 0.00 0.00 4.40
2048 2288 2.432628 CGTCCGGTTCCAGCAGTC 60.433 66.667 0.00 0.00 0.00 3.51
2049 2289 2.047179 GTCCGGTTCCAGCAGTCC 60.047 66.667 0.00 0.00 0.00 3.85
2050 2290 2.203788 TCCGGTTCCAGCAGTCCT 60.204 61.111 0.00 0.00 0.00 3.85
2051 2291 2.266055 CCGGTTCCAGCAGTCCTC 59.734 66.667 0.00 0.00 0.00 3.71
2052 2292 2.266055 CGGTTCCAGCAGTCCTCC 59.734 66.667 0.00 0.00 0.00 4.30
2053 2293 2.286523 CGGTTCCAGCAGTCCTCCT 61.287 63.158 0.00 0.00 0.00 3.69
2054 2294 1.831652 CGGTTCCAGCAGTCCTCCTT 61.832 60.000 0.00 0.00 0.00 3.36
2055 2295 0.035915 GGTTCCAGCAGTCCTCCTTC 60.036 60.000 0.00 0.00 0.00 3.46
2056 2296 0.390472 GTTCCAGCAGTCCTCCTTCG 60.390 60.000 0.00 0.00 0.00 3.79
2057 2297 1.544825 TTCCAGCAGTCCTCCTTCGG 61.545 60.000 0.00 0.00 0.00 4.30
2058 2298 2.286523 CCAGCAGTCCTCCTTCGGT 61.287 63.158 0.00 0.00 0.00 4.69
2059 2299 1.079543 CAGCAGTCCTCCTTCGGTG 60.080 63.158 0.00 0.00 0.00 4.94
2060 2300 1.534235 AGCAGTCCTCCTTCGGTGT 60.534 57.895 0.00 0.00 0.00 4.16
2061 2301 1.079750 GCAGTCCTCCTTCGGTGTC 60.080 63.158 0.00 0.00 0.00 3.67
2062 2302 1.592223 CAGTCCTCCTTCGGTGTCC 59.408 63.158 0.00 0.00 0.00 4.02
2063 2303 0.900647 CAGTCCTCCTTCGGTGTCCT 60.901 60.000 0.00 0.00 0.00 3.85
2064 2304 0.612453 AGTCCTCCTTCGGTGTCCTC 60.612 60.000 0.00 0.00 0.00 3.71
2065 2305 1.305046 TCCTCCTTCGGTGTCCTCC 60.305 63.158 0.00 0.00 0.00 4.30
2066 2306 1.305381 CCTCCTTCGGTGTCCTCCT 60.305 63.158 0.00 0.00 0.00 3.69
2067 2307 1.324005 CCTCCTTCGGTGTCCTCCTC 61.324 65.000 0.00 0.00 0.00 3.71
2068 2308 1.305046 TCCTTCGGTGTCCTCCTCC 60.305 63.158 0.00 0.00 0.00 4.30
2069 2309 1.609501 CCTTCGGTGTCCTCCTCCA 60.610 63.158 0.00 0.00 0.00 3.86
2070 2310 0.978146 CCTTCGGTGTCCTCCTCCAT 60.978 60.000 0.00 0.00 0.00 3.41
2071 2311 0.176680 CTTCGGTGTCCTCCTCCATG 59.823 60.000 0.00 0.00 0.00 3.66
2072 2312 1.899437 TTCGGTGTCCTCCTCCATGC 61.899 60.000 0.00 0.00 0.00 4.06
2073 2313 2.187946 GGTGTCCTCCTCCATGCG 59.812 66.667 0.00 0.00 0.00 4.73
2074 2314 2.187946 GTGTCCTCCTCCATGCGG 59.812 66.667 0.00 0.00 0.00 5.69
2075 2315 3.785859 TGTCCTCCTCCATGCGGC 61.786 66.667 0.00 0.00 0.00 6.53
2076 2316 4.554036 GTCCTCCTCCATGCGGCC 62.554 72.222 0.00 0.00 0.00 6.13
2077 2317 4.804420 TCCTCCTCCATGCGGCCT 62.804 66.667 0.00 0.00 0.00 5.19
2078 2318 4.559063 CCTCCTCCATGCGGCCTG 62.559 72.222 0.00 0.00 0.00 4.85
2079 2319 3.790437 CTCCTCCATGCGGCCTGT 61.790 66.667 0.00 0.00 0.00 4.00
2080 2320 4.100084 TCCTCCATGCGGCCTGTG 62.100 66.667 0.00 0.00 0.00 3.66
2082 2322 4.415150 CTCCATGCGGCCTGTGGT 62.415 66.667 15.06 0.00 34.61 4.16
2083 2323 4.720902 TCCATGCGGCCTGTGGTG 62.721 66.667 15.06 1.67 34.61 4.17
2085 2325 3.434319 CATGCGGCCTGTGGTGTC 61.434 66.667 0.00 0.00 0.00 3.67
2086 2326 3.640407 ATGCGGCCTGTGGTGTCT 61.640 61.111 0.00 0.00 0.00 3.41
2087 2327 3.907260 ATGCGGCCTGTGGTGTCTG 62.907 63.158 0.00 0.00 0.00 3.51
2089 2329 4.704833 CGGCCTGTGGTGTCTGGG 62.705 72.222 0.00 0.00 0.00 4.45
2091 2331 3.958860 GCCTGTGGTGTCTGGGCT 61.959 66.667 0.00 0.00 39.68 5.19
2092 2332 2.592993 GCCTGTGGTGTCTGGGCTA 61.593 63.158 0.00 0.00 39.68 3.93
2093 2333 1.599047 CCTGTGGTGTCTGGGCTAG 59.401 63.158 0.00 0.00 0.00 3.42
2094 2334 1.599047 CTGTGGTGTCTGGGCTAGG 59.401 63.158 0.00 0.00 0.00 3.02
2095 2335 1.903877 CTGTGGTGTCTGGGCTAGGG 61.904 65.000 0.00 0.00 0.00 3.53
2096 2336 3.009115 TGGTGTCTGGGCTAGGGC 61.009 66.667 0.00 0.00 37.82 5.19
2097 2337 2.689034 GGTGTCTGGGCTAGGGCT 60.689 66.667 0.00 0.00 38.73 5.19
2098 2338 2.736826 GGTGTCTGGGCTAGGGCTC 61.737 68.421 0.00 0.00 39.89 4.70
2099 2339 1.687493 GTGTCTGGGCTAGGGCTCT 60.687 63.158 0.00 0.00 40.19 4.09
2100 2340 1.381872 TGTCTGGGCTAGGGCTCTC 60.382 63.158 0.00 0.00 40.19 3.20
2101 2341 1.075600 GTCTGGGCTAGGGCTCTCT 60.076 63.158 0.00 0.00 40.19 3.10
2102 2342 1.075674 TCTGGGCTAGGGCTCTCTG 60.076 63.158 0.00 0.00 40.19 3.35
2103 2343 2.765807 TGGGCTAGGGCTCTCTGC 60.766 66.667 0.00 0.00 40.19 4.26
2112 2352 4.168291 GCTCTCTGCCTTCCCCGG 62.168 72.222 0.00 0.00 35.15 5.73
2113 2353 3.474570 CTCTCTGCCTTCCCCGGG 61.475 72.222 15.80 15.80 0.00 5.73
2114 2354 4.332543 TCTCTGCCTTCCCCGGGT 62.333 66.667 21.85 0.00 0.00 5.28
2115 2355 3.787001 CTCTGCCTTCCCCGGGTC 61.787 72.222 21.85 3.30 0.00 4.46
2152 2392 4.778143 GGTGCGGCTACCCTGGTG 62.778 72.222 0.00 0.00 34.56 4.17
2153 2393 4.778143 GTGCGGCTACCCTGGTGG 62.778 72.222 0.00 0.00 41.37 4.61
2204 2444 2.753043 GGCTGGGTCCGTCTCGTA 60.753 66.667 0.00 0.00 0.00 3.43
2205 2445 2.345760 GGCTGGGTCCGTCTCGTAA 61.346 63.158 0.00 0.00 0.00 3.18
2206 2446 1.139095 GCTGGGTCCGTCTCGTAAG 59.861 63.158 0.00 0.00 0.00 2.34
2207 2447 1.807886 CTGGGTCCGTCTCGTAAGG 59.192 63.158 0.00 0.00 38.47 2.69
2208 2448 2.280823 CTGGGTCCGTCTCGTAAGGC 62.281 65.000 0.00 0.00 38.47 4.35
2209 2449 2.493501 GGTCCGTCTCGTAAGGCC 59.506 66.667 0.00 0.00 38.47 5.19
2210 2450 2.345760 GGTCCGTCTCGTAAGGCCA 61.346 63.158 5.01 0.00 38.47 5.36
2211 2451 1.673808 GGTCCGTCTCGTAAGGCCAT 61.674 60.000 5.01 0.00 38.47 4.40
2212 2452 0.527817 GTCCGTCTCGTAAGGCCATG 60.528 60.000 5.01 0.00 38.47 3.66
2213 2453 0.968901 TCCGTCTCGTAAGGCCATGT 60.969 55.000 5.01 0.00 38.47 3.21
2214 2454 0.806102 CCGTCTCGTAAGGCCATGTG 60.806 60.000 5.01 0.00 38.47 3.21
2215 2455 0.806102 CGTCTCGTAAGGCCATGTGG 60.806 60.000 5.01 0.00 38.53 4.17
2234 2474 3.766691 GGCGGTGTCGGGCTCTAA 61.767 66.667 0.00 0.00 36.79 2.10
2235 2475 2.202756 GCGGTGTCGGGCTCTAAG 60.203 66.667 0.00 0.00 36.79 2.18
2236 2476 2.494918 CGGTGTCGGGCTCTAAGG 59.505 66.667 0.00 0.00 0.00 2.69
2237 2477 2.187163 GGTGTCGGGCTCTAAGGC 59.813 66.667 0.00 0.00 40.51 4.35
2238 2478 2.202756 GTGTCGGGCTCTAAGGCG 60.203 66.667 0.00 0.00 42.43 5.52
2239 2479 4.143333 TGTCGGGCTCTAAGGCGC 62.143 66.667 0.00 0.00 42.43 6.53
2240 2480 4.893601 GTCGGGCTCTAAGGCGCC 62.894 72.222 21.89 21.89 42.43 6.53
2268 2508 4.314440 TGGTGTCCAGAGGCGTGC 62.314 66.667 0.00 0.00 0.00 5.34
2269 2509 4.314440 GGTGTCCAGAGGCGTGCA 62.314 66.667 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 40 8.794553 CGTACTATGTAAGATGAACCCTAATCT 58.205 37.037 0.00 0.00 34.58 2.40
124 126 1.517257 GATGGTGCACGAGGAGACG 60.517 63.158 11.45 0.00 39.31 4.18
129 131 4.457496 AGGCGATGGTGCACGAGG 62.457 66.667 11.45 4.53 36.28 4.63
133 141 0.674895 AAGAAGAGGCGATGGTGCAC 60.675 55.000 8.80 8.80 36.28 4.57
164 184 0.184451 AGCATGCCAATCTAGGTGGG 59.816 55.000 15.66 3.80 36.58 4.61
171 191 1.551883 GGAAACCAAGCATGCCAATCT 59.448 47.619 15.66 0.00 0.00 2.40
255 306 2.356382 CGGCTTGTACTTCACCACAAAA 59.644 45.455 0.00 0.00 34.43 2.44
272 323 1.153568 CATGACCATCGTGTCGGCT 60.154 57.895 0.00 0.00 38.11 5.52
342 393 0.911769 TGAATCAGGCTGAATCCGGT 59.088 50.000 25.57 5.20 0.00 5.28
430 482 2.742372 CAAGAAGGTGACGCGGGG 60.742 66.667 12.47 0.00 0.00 5.73
456 508 2.067766 GAGCTGCACAAAGAGTCAGAG 58.932 52.381 1.02 0.00 31.28 3.35
478 530 2.414138 GCTCAAATTTCAGCAACATGGC 59.586 45.455 9.42 0.00 35.56 4.40
686 808 4.805192 GCCATTAAAACCTACGATCGTGTA 59.195 41.667 30.23 10.90 0.00 2.90
693 815 3.864243 ACATCGCCATTAAAACCTACGA 58.136 40.909 0.00 0.00 0.00 3.43
783 908 0.251341 CACCACCTTCTTCCCCTTGG 60.251 60.000 0.00 0.00 0.00 3.61
790 915 0.036388 TCGATGGCACCACCTTCTTC 60.036 55.000 0.00 0.00 39.86 2.87
794 919 1.002134 CCTTCGATGGCACCACCTT 60.002 57.895 4.15 0.00 40.22 3.50
820 945 0.463474 GCACCTCATCCTTGCTCCTC 60.463 60.000 0.00 0.00 33.26 3.71
936 1116 3.256960 TTGGCCCTCCCACCTCAC 61.257 66.667 0.00 0.00 45.34 3.51
963 1143 1.456331 GGGGGCATGATCACCTTGG 60.456 63.158 0.00 0.00 0.00 3.61
985 1178 0.037232 GGCATAGGTATGGCCTCGAC 60.037 60.000 3.32 0.00 46.96 4.20
1025 1218 4.789075 CCTGCGACACGTACGGGG 62.789 72.222 23.48 14.79 0.00 5.73
1051 1244 0.670546 CAGCCGGTGTTCGTCTTCAT 60.671 55.000 1.90 0.00 37.11 2.57
1119 1312 2.710826 AAAGGTGGCCCAACCCTGT 61.711 57.895 8.63 0.00 41.54 4.00
1225 1426 4.703575 CCTGATCACCACTTCAATGACATT 59.296 41.667 0.00 0.00 0.00 2.71
1229 1430 3.678289 CACCTGATCACCACTTCAATGA 58.322 45.455 0.00 0.00 0.00 2.57
1320 1539 4.497340 GGACAAGTTCAAACGCAAATCAGA 60.497 41.667 0.00 0.00 0.00 3.27
1397 1623 2.169352 AGCGTTATCAGGAAGAGCACAT 59.831 45.455 0.00 0.00 0.00 3.21
1433 1671 2.758327 TCCTCGGTCCGATGGTGG 60.758 66.667 15.81 12.67 34.61 4.61
1488 1726 2.050077 GCGCAAACACAAGGCCTC 60.050 61.111 5.23 0.00 0.00 4.70
1520 1758 3.902162 TAGCGCACGGTGTTCGGTC 62.902 63.158 11.47 0.00 44.45 4.79
1587 1826 2.102925 CAGCCTCCAAACCAACATTTGT 59.897 45.455 0.00 0.00 37.79 2.83
1601 1840 0.108945 GTTGAGCAAATGCAGCCTCC 60.109 55.000 8.28 0.00 45.16 4.30
1628 1868 3.242543 GCACGAGAAATTGATGGCACTAG 60.243 47.826 0.00 0.00 0.00 2.57
1631 1871 1.199789 TGCACGAGAAATTGATGGCAC 59.800 47.619 0.00 0.00 0.00 5.01
1632 1872 1.532523 TGCACGAGAAATTGATGGCA 58.467 45.000 0.00 0.00 0.00 4.92
1633 1873 2.097954 TCATGCACGAGAAATTGATGGC 59.902 45.455 0.00 0.00 0.00 4.40
1634 1874 3.127376 TGTCATGCACGAGAAATTGATGG 59.873 43.478 0.00 0.00 0.00 3.51
1636 1876 5.449588 GGATTGTCATGCACGAGAAATTGAT 60.450 40.000 0.00 0.00 0.00 2.57
1637 1877 4.142622 GGATTGTCATGCACGAGAAATTGA 60.143 41.667 0.00 0.00 0.00 2.57
1638 1878 4.100529 GGATTGTCATGCACGAGAAATTG 58.899 43.478 0.00 0.00 0.00 2.32
1639 1879 3.758023 TGGATTGTCATGCACGAGAAATT 59.242 39.130 0.00 0.00 0.00 1.82
1640 1880 3.346315 TGGATTGTCATGCACGAGAAAT 58.654 40.909 0.00 0.00 0.00 2.17
1641 1881 2.777094 TGGATTGTCATGCACGAGAAA 58.223 42.857 0.00 0.00 0.00 2.52
1642 1882 2.470983 TGGATTGTCATGCACGAGAA 57.529 45.000 0.00 0.00 0.00 2.87
1643 1883 2.696989 ATGGATTGTCATGCACGAGA 57.303 45.000 0.00 0.00 32.80 4.04
1644 1884 3.461061 AGTATGGATTGTCATGCACGAG 58.539 45.455 0.00 0.00 32.80 4.18
1645 1885 3.457234 GAGTATGGATTGTCATGCACGA 58.543 45.455 0.00 0.00 32.80 4.35
1646 1886 2.219445 CGAGTATGGATTGTCATGCACG 59.781 50.000 0.00 0.00 37.44 5.34
1647 1887 2.032549 GCGAGTATGGATTGTCATGCAC 60.033 50.000 0.00 0.00 32.80 4.57
1648 1888 2.212652 GCGAGTATGGATTGTCATGCA 58.787 47.619 0.00 0.00 34.82 3.96
1649 1889 2.212652 TGCGAGTATGGATTGTCATGC 58.787 47.619 0.00 0.00 0.00 4.06
1650 1890 4.122046 TCTTGCGAGTATGGATTGTCATG 58.878 43.478 0.00 0.00 0.00 3.07
1651 1891 4.406648 TCTTGCGAGTATGGATTGTCAT 57.593 40.909 0.00 0.00 0.00 3.06
1652 1892 3.885724 TCTTGCGAGTATGGATTGTCA 57.114 42.857 0.00 0.00 0.00 3.58
1653 1893 5.447818 CCTTTTCTTGCGAGTATGGATTGTC 60.448 44.000 0.00 0.00 0.00 3.18
1654 1894 4.396166 CCTTTTCTTGCGAGTATGGATTGT 59.604 41.667 0.00 0.00 0.00 2.71
1655 1895 4.635765 TCCTTTTCTTGCGAGTATGGATTG 59.364 41.667 0.00 0.00 0.00 2.67
1656 1896 4.843728 TCCTTTTCTTGCGAGTATGGATT 58.156 39.130 0.00 0.00 0.00 3.01
1657 1897 4.487714 TCCTTTTCTTGCGAGTATGGAT 57.512 40.909 0.00 0.00 0.00 3.41
1658 1898 3.973206 TCCTTTTCTTGCGAGTATGGA 57.027 42.857 0.00 5.32 0.00 3.41
1659 1899 5.371115 TTTTCCTTTTCTTGCGAGTATGG 57.629 39.130 0.00 3.14 0.00 2.74
1680 1920 2.103094 GCTTTCCAGCTTGTCCCTTTTT 59.897 45.455 0.00 0.00 43.51 1.94
1681 1921 1.688735 GCTTTCCAGCTTGTCCCTTTT 59.311 47.619 0.00 0.00 43.51 2.27
1682 1922 1.332195 GCTTTCCAGCTTGTCCCTTT 58.668 50.000 0.00 0.00 43.51 3.11
1683 1923 3.042481 GCTTTCCAGCTTGTCCCTT 57.958 52.632 0.00 0.00 43.51 3.95
1684 1924 4.830573 GCTTTCCAGCTTGTCCCT 57.169 55.556 0.00 0.00 43.51 4.20
1693 1933 2.264813 CATCGCCATTTTGCTTTCCAG 58.735 47.619 0.00 0.00 0.00 3.86
1694 1934 1.672441 GCATCGCCATTTTGCTTTCCA 60.672 47.619 0.00 0.00 33.61 3.53
1695 1935 1.001624 GCATCGCCATTTTGCTTTCC 58.998 50.000 0.00 0.00 33.61 3.13
1696 1936 2.000429 AGCATCGCCATTTTGCTTTC 58.000 45.000 0.00 0.00 43.94 2.62
1697 1937 2.736400 GCTAGCATCGCCATTTTGCTTT 60.736 45.455 10.63 0.00 43.94 3.51
1698 1938 1.202336 GCTAGCATCGCCATTTTGCTT 60.202 47.619 10.63 0.00 43.94 3.91
1700 1940 0.383231 AGCTAGCATCGCCATTTTGC 59.617 50.000 18.83 0.00 36.63 3.68
1701 1941 1.672363 TCAGCTAGCATCGCCATTTTG 59.328 47.619 18.83 2.02 0.00 2.44
1702 1942 2.042686 TCAGCTAGCATCGCCATTTT 57.957 45.000 18.83 0.00 0.00 1.82
1703 1943 2.149578 GATCAGCTAGCATCGCCATTT 58.850 47.619 18.83 0.00 0.00 2.32
1704 1944 1.610102 GGATCAGCTAGCATCGCCATT 60.610 52.381 18.83 0.00 0.00 3.16
1705 1945 0.036577 GGATCAGCTAGCATCGCCAT 60.037 55.000 18.83 0.00 0.00 4.40
1706 1946 1.117749 AGGATCAGCTAGCATCGCCA 61.118 55.000 18.83 0.00 0.00 5.69
1707 1947 0.669932 CAGGATCAGCTAGCATCGCC 60.670 60.000 18.83 12.63 0.00 5.54
1708 1948 0.316522 TCAGGATCAGCTAGCATCGC 59.683 55.000 18.83 6.48 0.00 4.58
1709 1949 1.339291 TGTCAGGATCAGCTAGCATCG 59.661 52.381 18.83 4.91 0.00 3.84
1710 1950 3.029320 CTGTCAGGATCAGCTAGCATC 57.971 52.381 18.83 11.87 0.00 3.91
1718 1958 0.322648 TGTGGTGCTGTCAGGATCAG 59.677 55.000 7.67 0.00 36.18 2.90
1719 1959 0.322648 CTGTGGTGCTGTCAGGATCA 59.677 55.000 2.70 2.70 0.00 2.92
1720 1960 1.023513 GCTGTGGTGCTGTCAGGATC 61.024 60.000 1.14 0.00 0.00 3.36
1721 1961 1.002868 GCTGTGGTGCTGTCAGGAT 60.003 57.895 1.14 0.00 0.00 3.24
1722 1962 2.427320 GCTGTGGTGCTGTCAGGA 59.573 61.111 1.14 0.00 0.00 3.86
1723 1963 2.111669 TGCTGTGGTGCTGTCAGG 59.888 61.111 1.14 0.00 0.00 3.86
1724 1964 2.601398 CGTGCTGTGGTGCTGTCAG 61.601 63.158 0.00 0.00 0.00 3.51
1725 1965 2.588596 CGTGCTGTGGTGCTGTCA 60.589 61.111 0.00 0.00 0.00 3.58
1726 1966 2.588877 ACGTGCTGTGGTGCTGTC 60.589 61.111 0.00 0.00 0.00 3.51
1727 1967 2.896854 CACGTGCTGTGGTGCTGT 60.897 61.111 0.82 0.00 45.21 4.40
1735 1975 0.748005 AAAGGCAGAACACGTGCTGT 60.748 50.000 17.22 0.00 40.97 4.40
1736 1976 0.381801 AAAAGGCAGAACACGTGCTG 59.618 50.000 17.22 16.60 40.97 4.41
1737 1977 0.663153 GAAAAGGCAGAACACGTGCT 59.337 50.000 17.22 2.15 40.97 4.40
1738 1978 0.663153 AGAAAAGGCAGAACACGTGC 59.337 50.000 17.22 0.00 40.42 5.34
1739 1979 3.059597 CAGTAGAAAAGGCAGAACACGTG 60.060 47.826 15.48 15.48 0.00 4.49
1740 1980 3.131396 CAGTAGAAAAGGCAGAACACGT 58.869 45.455 0.00 0.00 0.00 4.49
1741 1981 2.096218 GCAGTAGAAAAGGCAGAACACG 60.096 50.000 0.00 0.00 0.00 4.49
1742 1982 3.058639 CAGCAGTAGAAAAGGCAGAACAC 60.059 47.826 0.00 0.00 0.00 3.32
1743 1983 3.141398 CAGCAGTAGAAAAGGCAGAACA 58.859 45.455 0.00 0.00 0.00 3.18
1744 1984 2.095516 GCAGCAGTAGAAAAGGCAGAAC 60.096 50.000 0.00 0.00 0.00 3.01
1745 1985 2.154462 GCAGCAGTAGAAAAGGCAGAA 58.846 47.619 0.00 0.00 0.00 3.02
1746 1986 1.349026 AGCAGCAGTAGAAAAGGCAGA 59.651 47.619 0.00 0.00 0.00 4.26
1747 1987 1.818642 AGCAGCAGTAGAAAAGGCAG 58.181 50.000 0.00 0.00 0.00 4.85
1748 1988 3.417069 TTAGCAGCAGTAGAAAAGGCA 57.583 42.857 0.00 0.00 0.00 4.75
1749 1989 3.753797 AGTTTAGCAGCAGTAGAAAAGGC 59.246 43.478 0.00 0.00 0.00 4.35
1750 1990 4.757149 ACAGTTTAGCAGCAGTAGAAAAGG 59.243 41.667 0.00 0.00 0.00 3.11
1751 1991 5.931441 ACAGTTTAGCAGCAGTAGAAAAG 57.069 39.130 0.00 0.00 0.00 2.27
1752 1992 6.693315 AAACAGTTTAGCAGCAGTAGAAAA 57.307 33.333 0.00 0.00 0.00 2.29
1753 1993 6.094881 ACAAAACAGTTTAGCAGCAGTAGAAA 59.905 34.615 0.00 0.00 0.00 2.52
1754 1994 5.588648 ACAAAACAGTTTAGCAGCAGTAGAA 59.411 36.000 0.00 0.00 0.00 2.10
1755 1995 5.123227 ACAAAACAGTTTAGCAGCAGTAGA 58.877 37.500 0.00 0.00 0.00 2.59
1756 1996 5.237344 AGACAAAACAGTTTAGCAGCAGTAG 59.763 40.000 0.00 0.00 0.00 2.57
1757 1997 5.123227 AGACAAAACAGTTTAGCAGCAGTA 58.877 37.500 0.00 0.00 0.00 2.74
1758 1998 3.947834 AGACAAAACAGTTTAGCAGCAGT 59.052 39.130 0.00 0.00 0.00 4.40
1759 1999 4.558538 AGACAAAACAGTTTAGCAGCAG 57.441 40.909 0.00 0.00 0.00 4.24
1760 2000 4.671377 CAAGACAAAACAGTTTAGCAGCA 58.329 39.130 0.00 0.00 0.00 4.41
1761 2001 3.487207 GCAAGACAAAACAGTTTAGCAGC 59.513 43.478 0.00 0.00 0.00 5.25
1762 2002 4.671377 TGCAAGACAAAACAGTTTAGCAG 58.329 39.130 0.00 0.00 0.00 4.24
1763 2003 4.157656 ACTGCAAGACAAAACAGTTTAGCA 59.842 37.500 0.00 3.13 40.35 3.49
1764 2004 4.672409 ACTGCAAGACAAAACAGTTTAGC 58.328 39.130 0.00 0.00 40.35 3.09
1765 2005 8.856490 ATTTACTGCAAGACAAAACAGTTTAG 57.144 30.769 0.00 0.00 42.97 1.85
1766 2006 9.081997 CAATTTACTGCAAGACAAAACAGTTTA 57.918 29.630 0.00 0.00 42.97 2.01
1767 2007 7.412891 GCAATTTACTGCAAGACAAAACAGTTT 60.413 33.333 0.00 0.00 42.97 2.66
1768 2008 6.035975 GCAATTTACTGCAAGACAAAACAGTT 59.964 34.615 0.00 0.00 42.97 3.16
1769 2009 5.519927 GCAATTTACTGCAAGACAAAACAGT 59.480 36.000 0.00 0.00 45.02 3.55
1770 2010 5.050837 GGCAATTTACTGCAAGACAAAACAG 60.051 40.000 0.00 0.00 44.52 3.16
1771 2011 4.808364 GGCAATTTACTGCAAGACAAAACA 59.192 37.500 0.00 0.00 44.52 2.83
1772 2012 4.808364 TGGCAATTTACTGCAAGACAAAAC 59.192 37.500 0.00 0.00 44.52 2.43
1773 2013 4.808364 GTGGCAATTTACTGCAAGACAAAA 59.192 37.500 0.00 0.00 44.52 2.44
1774 2014 4.099266 AGTGGCAATTTACTGCAAGACAAA 59.901 37.500 0.00 0.00 44.52 2.83
1775 2015 3.636300 AGTGGCAATTTACTGCAAGACAA 59.364 39.130 0.00 0.00 44.52 3.18
1776 2016 3.221771 AGTGGCAATTTACTGCAAGACA 58.778 40.909 0.00 0.00 44.52 3.41
1777 2017 3.923017 AGTGGCAATTTACTGCAAGAC 57.077 42.857 0.00 0.00 44.52 3.01
1778 2018 4.651778 AGTAGTGGCAATTTACTGCAAGA 58.348 39.130 0.00 0.00 44.52 3.02
1779 2019 4.142600 GGAGTAGTGGCAATTTACTGCAAG 60.143 45.833 16.31 0.00 44.52 4.01
1780 2020 3.756434 GGAGTAGTGGCAATTTACTGCAA 59.244 43.478 16.31 0.00 44.52 4.08
1781 2021 3.343617 GGAGTAGTGGCAATTTACTGCA 58.656 45.455 16.31 0.00 44.52 4.41
1782 2022 2.683362 GGGAGTAGTGGCAATTTACTGC 59.317 50.000 14.18 14.18 41.85 4.40
1783 2023 3.279434 GGGGAGTAGTGGCAATTTACTG 58.721 50.000 11.02 0.00 0.00 2.74
1784 2024 2.241430 GGGGGAGTAGTGGCAATTTACT 59.759 50.000 0.00 0.00 0.00 2.24
1785 2025 2.651455 GGGGGAGTAGTGGCAATTTAC 58.349 52.381 0.00 0.00 0.00 2.01
1803 2043 8.609617 AGAAAGGATTTAATTTTCTTAGGGGG 57.390 34.615 0.31 0.00 39.27 5.40
1804 2044 9.875691 CAAGAAAGGATTTAATTTTCTTAGGGG 57.124 33.333 13.64 3.07 44.78 4.79
1805 2045 9.371136 GCAAGAAAGGATTTAATTTTCTTAGGG 57.629 33.333 13.64 6.65 44.78 3.53
1806 2046 9.927668 TGCAAGAAAGGATTTAATTTTCTTAGG 57.072 29.630 13.64 7.14 44.78 2.69
1809 2049 9.836864 ACTTGCAAGAAAGGATTTAATTTTCTT 57.163 25.926 32.50 10.05 46.47 2.52
1814 2054 9.643693 CATGTACTTGCAAGAAAGGATTTAATT 57.356 29.630 32.50 7.97 39.27 1.40
1815 2055 8.806146 ACATGTACTTGCAAGAAAGGATTTAAT 58.194 29.630 32.50 8.18 39.27 1.40
1816 2056 8.177119 ACATGTACTTGCAAGAAAGGATTTAA 57.823 30.769 32.50 6.32 39.27 1.52
1817 2057 7.759489 ACATGTACTTGCAAGAAAGGATTTA 57.241 32.000 32.50 9.16 39.27 1.40
1818 2058 6.655078 ACATGTACTTGCAAGAAAGGATTT 57.345 33.333 32.50 10.21 43.98 2.17
1819 2059 7.230510 TGTTACATGTACTTGCAAGAAAGGATT 59.769 33.333 32.50 10.97 0.00 3.01
1820 2060 6.714810 TGTTACATGTACTTGCAAGAAAGGAT 59.285 34.615 32.50 15.21 0.00 3.24
1821 2061 6.058833 TGTTACATGTACTTGCAAGAAAGGA 58.941 36.000 32.50 11.15 0.00 3.36
1822 2062 6.312399 TGTTACATGTACTTGCAAGAAAGG 57.688 37.500 32.50 19.33 0.00 3.11
1823 2063 8.801715 AAATGTTACATGTACTTGCAAGAAAG 57.198 30.769 32.50 17.85 0.00 2.62
1824 2064 7.589587 CGAAATGTTACATGTACTTGCAAGAAA 59.410 33.333 32.50 16.87 0.00 2.52
1825 2065 7.075121 CGAAATGTTACATGTACTTGCAAGAA 58.925 34.615 32.50 17.20 0.00 2.52
1826 2066 6.598525 CGAAATGTTACATGTACTTGCAAGA 58.401 36.000 32.50 11.28 0.00 3.02
1827 2067 5.283717 GCGAAATGTTACATGTACTTGCAAG 59.716 40.000 24.84 24.84 0.00 4.01
1828 2068 5.150683 GCGAAATGTTACATGTACTTGCAA 58.849 37.500 4.68 0.00 0.00 4.08
1829 2069 4.378978 GGCGAAATGTTACATGTACTTGCA 60.379 41.667 4.68 3.30 0.00 4.08
1830 2070 4.095610 GGCGAAATGTTACATGTACTTGC 58.904 43.478 4.68 3.32 0.00 4.01
1831 2071 5.121611 TGAGGCGAAATGTTACATGTACTTG 59.878 40.000 4.68 7.18 0.00 3.16
1832 2072 5.242434 TGAGGCGAAATGTTACATGTACTT 58.758 37.500 4.68 0.00 0.00 2.24
1833 2073 4.827692 TGAGGCGAAATGTTACATGTACT 58.172 39.130 4.68 0.00 0.00 2.73
1834 2074 5.734855 ATGAGGCGAAATGTTACATGTAC 57.265 39.130 4.68 1.95 0.00 2.90
1835 2075 7.497579 ACAATATGAGGCGAAATGTTACATGTA 59.502 33.333 0.08 0.08 0.00 2.29
1836 2076 6.318648 ACAATATGAGGCGAAATGTTACATGT 59.681 34.615 2.69 2.69 0.00 3.21
1837 2077 6.728200 ACAATATGAGGCGAAATGTTACATG 58.272 36.000 0.00 0.00 0.00 3.21
1838 2078 6.017109 GGACAATATGAGGCGAAATGTTACAT 60.017 38.462 0.00 0.00 0.00 2.29
1839 2079 5.295787 GGACAATATGAGGCGAAATGTTACA 59.704 40.000 0.00 0.00 0.00 2.41
1840 2080 5.277828 GGGACAATATGAGGCGAAATGTTAC 60.278 44.000 0.00 0.00 0.00 2.50
1841 2081 4.819630 GGGACAATATGAGGCGAAATGTTA 59.180 41.667 0.00 0.00 0.00 2.41
1842 2082 3.632145 GGGACAATATGAGGCGAAATGTT 59.368 43.478 0.00 0.00 0.00 2.71
1843 2083 3.214328 GGGACAATATGAGGCGAAATGT 58.786 45.455 0.00 0.00 0.00 2.71
1844 2084 3.213506 TGGGACAATATGAGGCGAAATG 58.786 45.455 0.00 0.00 31.92 2.32
1845 2085 3.576078 TGGGACAATATGAGGCGAAAT 57.424 42.857 0.00 0.00 31.92 2.17
1854 2094 8.928542 GGGCATCTCCTAATTTGGGACAATATG 61.929 44.444 6.08 1.96 38.29 1.78
1855 2095 6.977687 GGGCATCTCCTAATTTGGGACAATAT 60.978 42.308 6.08 0.00 38.29 1.28
1856 2096 5.692781 GGGCATCTCCTAATTTGGGACAATA 60.693 44.000 6.08 0.00 38.29 1.90
1857 2097 4.937196 GGGCATCTCCTAATTTGGGACAAT 60.937 45.833 6.08 0.00 38.29 2.71
1858 2098 3.627237 GGGCATCTCCTAATTTGGGACAA 60.627 47.826 6.08 0.00 38.29 3.18
1859 2099 2.091885 GGGCATCTCCTAATTTGGGACA 60.092 50.000 6.08 0.00 34.39 4.02
1860 2100 2.175715 AGGGCATCTCCTAATTTGGGAC 59.824 50.000 6.08 0.00 34.92 4.46
1861 2101 2.502745 AGGGCATCTCCTAATTTGGGA 58.497 47.619 6.08 1.18 34.92 4.37
1862 2102 3.319031 AAGGGCATCTCCTAATTTGGG 57.681 47.619 6.08 0.00 35.80 4.12
1863 2103 5.634118 TGATAAGGGCATCTCCTAATTTGG 58.366 41.667 0.00 0.00 35.80 3.28
1864 2104 7.771927 ATTGATAAGGGCATCTCCTAATTTG 57.228 36.000 0.00 0.00 35.80 2.32
1865 2105 9.881773 TTAATTGATAAGGGCATCTCCTAATTT 57.118 29.630 0.00 0.00 35.80 1.82
1866 2106 9.301897 GTTAATTGATAAGGGCATCTCCTAATT 57.698 33.333 0.00 0.00 35.80 1.40
1867 2107 8.673251 AGTTAATTGATAAGGGCATCTCCTAAT 58.327 33.333 0.00 0.00 35.80 1.73
1868 2108 8.045720 AGTTAATTGATAAGGGCATCTCCTAA 57.954 34.615 0.00 0.00 35.80 2.69
1869 2109 7.633018 AGTTAATTGATAAGGGCATCTCCTA 57.367 36.000 0.00 0.00 35.80 2.94
1870 2110 6.521527 AGTTAATTGATAAGGGCATCTCCT 57.478 37.500 0.00 0.00 39.17 3.69
1871 2111 6.015940 CCAAGTTAATTGATAAGGGCATCTCC 60.016 42.308 0.00 0.00 41.83 3.71
1872 2112 6.547510 ACCAAGTTAATTGATAAGGGCATCTC 59.452 38.462 0.00 0.00 41.83 2.75
1873 2113 6.322201 CACCAAGTTAATTGATAAGGGCATCT 59.678 38.462 0.00 0.00 41.83 2.90
1874 2114 6.321181 TCACCAAGTTAATTGATAAGGGCATC 59.679 38.462 0.00 0.00 41.83 3.91
1875 2115 6.096846 GTCACCAAGTTAATTGATAAGGGCAT 59.903 38.462 0.00 0.00 41.83 4.40
1876 2116 5.417580 GTCACCAAGTTAATTGATAAGGGCA 59.582 40.000 0.00 0.00 41.83 5.36
1877 2117 5.652452 AGTCACCAAGTTAATTGATAAGGGC 59.348 40.000 0.00 0.00 41.83 5.19
1878 2118 7.112779 AGAGTCACCAAGTTAATTGATAAGGG 58.887 38.462 0.00 0.00 41.83 3.95
1879 2119 7.281100 GGAGAGTCACCAAGTTAATTGATAAGG 59.719 40.741 1.15 0.00 41.83 2.69
1880 2120 8.043710 AGGAGAGTCACCAAGTTAATTGATAAG 58.956 37.037 9.44 0.00 41.83 1.73
1881 2121 7.918076 AGGAGAGTCACCAAGTTAATTGATAA 58.082 34.615 9.44 0.00 41.83 1.75
1882 2122 7.400339 AGAGGAGAGTCACCAAGTTAATTGATA 59.600 37.037 9.44 0.00 41.83 2.15
1883 2123 6.214412 AGAGGAGAGTCACCAAGTTAATTGAT 59.786 38.462 9.44 0.00 41.83 2.57
1884 2124 5.544176 AGAGGAGAGTCACCAAGTTAATTGA 59.456 40.000 9.44 0.00 41.83 2.57
1885 2125 5.799213 AGAGGAGAGTCACCAAGTTAATTG 58.201 41.667 9.44 0.00 38.74 2.32
1886 2126 6.441088 AAGAGGAGAGTCACCAAGTTAATT 57.559 37.500 9.44 0.00 0.00 1.40
1887 2127 6.441088 AAAGAGGAGAGTCACCAAGTTAAT 57.559 37.500 9.44 0.00 0.00 1.40
1888 2128 5.221661 GGAAAGAGGAGAGTCACCAAGTTAA 60.222 44.000 9.44 0.00 0.00 2.01
1889 2129 4.283722 GGAAAGAGGAGAGTCACCAAGTTA 59.716 45.833 9.44 0.00 0.00 2.24
1890 2130 3.071747 GGAAAGAGGAGAGTCACCAAGTT 59.928 47.826 9.44 0.00 0.00 2.66
1891 2131 2.635427 GGAAAGAGGAGAGTCACCAAGT 59.365 50.000 9.44 0.00 0.00 3.16
1892 2132 2.027653 GGGAAAGAGGAGAGTCACCAAG 60.028 54.545 9.44 0.00 0.00 3.61
1893 2133 1.978580 GGGAAAGAGGAGAGTCACCAA 59.021 52.381 9.44 0.00 0.00 3.67
1894 2134 1.132849 TGGGAAAGAGGAGAGTCACCA 60.133 52.381 9.44 0.00 0.00 4.17
1895 2135 1.552792 CTGGGAAAGAGGAGAGTCACC 59.447 57.143 0.00 0.00 0.00 4.02
1896 2136 1.066502 GCTGGGAAAGAGGAGAGTCAC 60.067 57.143 0.00 0.00 0.00 3.67
1897 2137 1.270907 GCTGGGAAAGAGGAGAGTCA 58.729 55.000 0.00 0.00 0.00 3.41
1898 2138 0.174617 CGCTGGGAAAGAGGAGAGTC 59.825 60.000 0.00 0.00 0.00 3.36
1899 2139 1.893919 GCGCTGGGAAAGAGGAGAGT 61.894 60.000 0.00 0.00 0.00 3.24
1900 2140 1.153469 GCGCTGGGAAAGAGGAGAG 60.153 63.158 0.00 0.00 0.00 3.20
1901 2141 1.608717 GAGCGCTGGGAAAGAGGAGA 61.609 60.000 18.48 0.00 0.00 3.71
1902 2142 1.153469 GAGCGCTGGGAAAGAGGAG 60.153 63.158 18.48 0.00 0.00 3.69
1903 2143 1.608717 GAGAGCGCTGGGAAAGAGGA 61.609 60.000 18.48 0.00 0.00 3.71
1904 2144 1.153469 GAGAGCGCTGGGAAAGAGG 60.153 63.158 18.48 0.00 0.00 3.69
1905 2145 0.248843 AAGAGAGCGCTGGGAAAGAG 59.751 55.000 18.48 0.00 0.00 2.85
1906 2146 0.247736 GAAGAGAGCGCTGGGAAAGA 59.752 55.000 18.48 0.00 0.00 2.52
1907 2147 0.742635 GGAAGAGAGCGCTGGGAAAG 60.743 60.000 18.48 0.00 0.00 2.62
1908 2148 1.296715 GGAAGAGAGCGCTGGGAAA 59.703 57.895 18.48 0.00 0.00 3.13
1909 2149 2.660064 GGGAAGAGAGCGCTGGGAA 61.660 63.158 18.48 0.00 0.00 3.97
1910 2150 3.077556 GGGAAGAGAGCGCTGGGA 61.078 66.667 18.48 0.00 0.00 4.37
1911 2151 4.168291 GGGGAAGAGAGCGCTGGG 62.168 72.222 18.48 0.00 0.00 4.45
1912 2152 3.382803 CTGGGGAAGAGAGCGCTGG 62.383 68.421 18.48 0.00 0.00 4.85
1913 2153 2.186384 CTGGGGAAGAGAGCGCTG 59.814 66.667 18.48 0.00 0.00 5.18
1914 2154 3.780173 GCTGGGGAAGAGAGCGCT 61.780 66.667 11.27 11.27 0.00 5.92
1915 2155 4.847444 GGCTGGGGAAGAGAGCGC 62.847 72.222 0.00 0.00 33.26 5.92
1916 2156 3.080121 AGGCTGGGGAAGAGAGCG 61.080 66.667 0.00 0.00 33.26 5.03
1917 2157 2.588989 CAGGCTGGGGAAGAGAGC 59.411 66.667 6.61 0.00 0.00 4.09
1918 2158 2.588989 GCAGGCTGGGGAAGAGAG 59.411 66.667 17.64 0.00 0.00 3.20
1919 2159 3.011517 GGCAGGCTGGGGAAGAGA 61.012 66.667 17.64 0.00 0.00 3.10
1920 2160 4.479993 CGGCAGGCTGGGGAAGAG 62.480 72.222 17.64 0.00 0.00 2.85
1956 2196 3.827898 GAGAGAGGTGGACGCCGG 61.828 72.222 0.00 0.00 0.00 6.13
1957 2197 2.752238 AGAGAGAGGTGGACGCCG 60.752 66.667 0.00 0.00 0.00 6.46
1958 2198 1.379309 AGAGAGAGAGGTGGACGCC 60.379 63.158 0.00 0.00 0.00 5.68
1959 2199 1.381165 GGAGAGAGAGAGGTGGACGC 61.381 65.000 0.00 0.00 0.00 5.19
1960 2200 0.750182 GGGAGAGAGAGAGGTGGACG 60.750 65.000 0.00 0.00 0.00 4.79
1961 2201 0.396556 GGGGAGAGAGAGAGGTGGAC 60.397 65.000 0.00 0.00 0.00 4.02
1962 2202 0.553862 AGGGGAGAGAGAGAGGTGGA 60.554 60.000 0.00 0.00 0.00 4.02
1963 2203 0.106217 GAGGGGAGAGAGAGAGGTGG 60.106 65.000 0.00 0.00 0.00 4.61
1964 2204 0.106217 GGAGGGGAGAGAGAGAGGTG 60.106 65.000 0.00 0.00 0.00 4.00
1965 2205 1.641552 CGGAGGGGAGAGAGAGAGGT 61.642 65.000 0.00 0.00 0.00 3.85
1966 2206 1.150536 CGGAGGGGAGAGAGAGAGG 59.849 68.421 0.00 0.00 0.00 3.69
1967 2207 1.528309 GCGGAGGGGAGAGAGAGAG 60.528 68.421 0.00 0.00 0.00 3.20
1968 2208 2.598467 GCGGAGGGGAGAGAGAGA 59.402 66.667 0.00 0.00 0.00 3.10
1969 2209 2.520741 GGCGGAGGGGAGAGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
1970 2210 4.507916 CGGCGGAGGGGAGAGAGA 62.508 72.222 0.00 0.00 0.00 3.10
2004 2244 4.452733 GAGGGAAGGTGGACGCCG 62.453 72.222 0.00 0.00 0.00 6.46
2005 2245 4.097361 GGAGGGAAGGTGGACGCC 62.097 72.222 0.00 0.00 0.00 5.68
2006 2246 4.452733 CGGAGGGAAGGTGGACGC 62.453 72.222 0.00 0.00 0.00 5.19
2025 2265 4.402528 TGGAACCGGACGCCATGG 62.403 66.667 9.46 7.63 0.00 3.66
2026 2266 2.819595 CTGGAACCGGACGCCATG 60.820 66.667 9.46 3.09 0.00 3.66
2027 2267 4.778143 GCTGGAACCGGACGCCAT 62.778 66.667 9.46 0.00 0.00 4.40
2030 2270 4.681978 ACTGCTGGAACCGGACGC 62.682 66.667 9.46 3.15 0.00 5.19
2031 2271 2.432628 GACTGCTGGAACCGGACG 60.433 66.667 9.46 0.00 0.00 4.79
2032 2272 2.047179 GGACTGCTGGAACCGGAC 60.047 66.667 9.46 0.76 0.00 4.79
2033 2273 2.203788 AGGACTGCTGGAACCGGA 60.204 61.111 9.46 0.00 0.00 5.14
2034 2274 2.266055 GAGGACTGCTGGAACCGG 59.734 66.667 0.00 0.00 0.00 5.28
2035 2275 1.831652 AAGGAGGACTGCTGGAACCG 61.832 60.000 0.00 0.00 0.00 4.44
2036 2276 0.035915 GAAGGAGGACTGCTGGAACC 60.036 60.000 0.00 0.00 0.00 3.62
2037 2277 0.390472 CGAAGGAGGACTGCTGGAAC 60.390 60.000 0.00 0.00 0.00 3.62
2038 2278 1.975327 CGAAGGAGGACTGCTGGAA 59.025 57.895 0.00 0.00 0.00 3.53
2039 2279 3.700109 CGAAGGAGGACTGCTGGA 58.300 61.111 0.00 0.00 0.00 3.86
2052 2292 0.176680 CATGGAGGAGGACACCGAAG 59.823 60.000 0.00 0.00 34.73 3.79
2053 2293 1.899437 GCATGGAGGAGGACACCGAA 61.899 60.000 0.00 0.00 34.73 4.30
2054 2294 2.359169 GCATGGAGGAGGACACCGA 61.359 63.158 0.00 0.00 34.73 4.69
2055 2295 2.187946 GCATGGAGGAGGACACCG 59.812 66.667 0.00 0.00 34.73 4.94
2056 2296 2.187946 CGCATGGAGGAGGACACC 59.812 66.667 0.00 0.00 0.00 4.16
2057 2297 2.187946 CCGCATGGAGGAGGACAC 59.812 66.667 0.00 0.00 37.49 3.67
2058 2298 3.785859 GCCGCATGGAGGAGGACA 61.786 66.667 0.00 0.00 37.49 4.02
2059 2299 4.554036 GGCCGCATGGAGGAGGAC 62.554 72.222 0.00 0.00 37.49 3.85
2060 2300 4.804420 AGGCCGCATGGAGGAGGA 62.804 66.667 0.00 0.00 37.49 3.71
2061 2301 4.559063 CAGGCCGCATGGAGGAGG 62.559 72.222 0.00 0.00 37.49 4.30
2062 2302 3.790437 ACAGGCCGCATGGAGGAG 61.790 66.667 10.21 0.00 37.49 3.69
2063 2303 4.100084 CACAGGCCGCATGGAGGA 62.100 66.667 10.21 0.00 37.49 3.71
2065 2305 4.415150 ACCACAGGCCGCATGGAG 62.415 66.667 24.66 2.55 36.94 3.86
2066 2306 4.720902 CACCACAGGCCGCATGGA 62.721 66.667 24.66 0.00 36.94 3.41
2068 2308 3.434319 GACACCACAGGCCGCATG 61.434 66.667 2.89 2.89 0.00 4.06
2069 2309 3.640407 AGACACCACAGGCCGCAT 61.640 61.111 0.00 0.00 0.00 4.73
2070 2310 4.624364 CAGACACCACAGGCCGCA 62.624 66.667 0.00 0.00 0.00 5.69
2072 2312 4.704833 CCCAGACACCACAGGCCG 62.705 72.222 0.00 0.00 0.00 6.13
2074 2314 2.527951 CTAGCCCAGACACCACAGGC 62.528 65.000 0.00 0.00 44.20 4.85
2075 2315 1.599047 CTAGCCCAGACACCACAGG 59.401 63.158 0.00 0.00 0.00 4.00
2076 2316 1.599047 CCTAGCCCAGACACCACAG 59.401 63.158 0.00 0.00 0.00 3.66
2077 2317 1.918293 CCCTAGCCCAGACACCACA 60.918 63.158 0.00 0.00 0.00 4.17
2078 2318 2.990479 CCCTAGCCCAGACACCAC 59.010 66.667 0.00 0.00 0.00 4.16
2079 2319 3.009115 GCCCTAGCCCAGACACCA 61.009 66.667 0.00 0.00 0.00 4.17
2080 2320 2.689034 AGCCCTAGCCCAGACACC 60.689 66.667 0.00 0.00 41.25 4.16
2081 2321 1.681486 GAGAGCCCTAGCCCAGACAC 61.681 65.000 0.00 0.00 41.25 3.67
2082 2322 1.381872 GAGAGCCCTAGCCCAGACA 60.382 63.158 0.00 0.00 41.25 3.41
2083 2323 1.075600 AGAGAGCCCTAGCCCAGAC 60.076 63.158 0.00 0.00 41.25 3.51
2084 2324 1.075674 CAGAGAGCCCTAGCCCAGA 60.076 63.158 0.00 0.00 41.25 3.86
2085 2325 2.806009 GCAGAGAGCCCTAGCCCAG 61.806 68.421 0.00 0.00 41.25 4.45
2086 2326 2.765807 GCAGAGAGCCCTAGCCCA 60.766 66.667 0.00 0.00 41.25 5.36
2095 2335 4.168291 CCGGGGAAGGCAGAGAGC 62.168 72.222 0.00 0.00 44.65 4.09
2096 2336 3.474570 CCCGGGGAAGGCAGAGAG 61.475 72.222 14.71 0.00 0.00 3.20
2097 2337 4.332543 ACCCGGGGAAGGCAGAGA 62.333 66.667 27.92 0.00 0.00 3.10
2098 2338 3.787001 GACCCGGGGAAGGCAGAG 61.787 72.222 27.92 0.00 0.00 3.35
2135 2375 4.778143 CACCAGGGTAGCCGCACC 62.778 72.222 5.06 0.00 37.91 5.01
2136 2376 4.778143 CCACCAGGGTAGCCGCAC 62.778 72.222 5.06 0.00 0.00 5.34
2187 2427 2.280823 CTTACGAGACGGACCCAGCC 62.281 65.000 0.00 0.00 0.00 4.85
2188 2428 1.139095 CTTACGAGACGGACCCAGC 59.861 63.158 0.00 0.00 0.00 4.85
2189 2429 1.807886 CCTTACGAGACGGACCCAG 59.192 63.158 0.00 0.00 0.00 4.45
2190 2430 2.345760 GCCTTACGAGACGGACCCA 61.346 63.158 0.00 0.00 0.00 4.51
2191 2431 2.493501 GCCTTACGAGACGGACCC 59.506 66.667 0.00 0.00 0.00 4.46
2192 2432 1.673808 ATGGCCTTACGAGACGGACC 61.674 60.000 3.32 0.00 0.00 4.46
2193 2433 0.527817 CATGGCCTTACGAGACGGAC 60.528 60.000 3.32 0.00 0.00 4.79
2194 2434 0.968901 ACATGGCCTTACGAGACGGA 60.969 55.000 3.32 0.00 0.00 4.69
2195 2435 0.806102 CACATGGCCTTACGAGACGG 60.806 60.000 3.32 0.00 0.00 4.79
2196 2436 0.806102 CCACATGGCCTTACGAGACG 60.806 60.000 3.32 0.00 0.00 4.18
2197 2437 3.065575 CCACATGGCCTTACGAGAC 57.934 57.895 3.32 0.00 0.00 3.36
2217 2457 3.718210 CTTAGAGCCCGACACCGCC 62.718 68.421 0.00 0.00 0.00 6.13
2218 2458 2.202756 CTTAGAGCCCGACACCGC 60.203 66.667 0.00 0.00 0.00 5.68
2219 2459 2.494918 CCTTAGAGCCCGACACCG 59.505 66.667 0.00 0.00 0.00 4.94
2220 2460 2.187163 GCCTTAGAGCCCGACACC 59.813 66.667 0.00 0.00 0.00 4.16
2221 2461 2.202756 CGCCTTAGAGCCCGACAC 60.203 66.667 0.00 0.00 0.00 3.67
2222 2462 4.143333 GCGCCTTAGAGCCCGACA 62.143 66.667 0.00 0.00 31.75 4.35
2228 2468 2.894387 CTGCTGGCGCCTTAGAGC 60.894 66.667 29.70 27.17 38.21 4.09
2229 2469 2.202987 CCTGCTGGCGCCTTAGAG 60.203 66.667 29.70 17.88 34.43 2.43
2230 2470 3.785859 CCCTGCTGGCGCCTTAGA 61.786 66.667 29.70 5.90 34.43 2.10
2231 2471 4.864334 CCCCTGCTGGCGCCTTAG 62.864 72.222 29.70 19.10 34.43 2.18
2240 2480 2.348998 GACACCAGTCCCCTGCTG 59.651 66.667 0.00 0.00 38.89 4.41
2251 2491 4.314440 GCACGCCTCTGGACACCA 62.314 66.667 0.00 0.00 0.00 4.17
2252 2492 4.314440 TGCACGCCTCTGGACACC 62.314 66.667 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.