Multiple sequence alignment - TraesCS4A01G254700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G254700 chr4A 100.000 4511 0 0 1 4511 566908692 566904182 0.000000e+00 8331.0
1 TraesCS4A01G254700 chr4A 82.073 2248 382 21 1274 3511 617932584 617930348 0.000000e+00 1899.0
2 TraesCS4A01G254700 chr4A 81.895 2248 392 15 1273 3514 621425620 621423382 0.000000e+00 1882.0
3 TraesCS4A01G254700 chr4A 80.215 2234 416 21 1274 3494 35255911 35258131 0.000000e+00 1653.0
4 TraesCS4A01G254700 chr4A 90.785 662 31 15 3879 4511 567215831 567216491 0.000000e+00 857.0
5 TraesCS4A01G254700 chr4A 88.571 665 32 17 196 831 567213999 567214648 0.000000e+00 767.0
6 TraesCS4A01G254700 chr7D 96.936 3003 82 6 882 3880 563695756 563698752 0.000000e+00 5027.0
7 TraesCS4A01G254700 chr7D 96.336 3002 94 10 882 3878 156074590 156077580 0.000000e+00 4920.0
8 TraesCS4A01G254700 chr7D 96.970 1188 31 3 882 2067 563701300 563700116 0.000000e+00 1989.0
9 TraesCS4A01G254700 chr7D 94.878 449 17 4 3434 3880 94792802 94793246 0.000000e+00 697.0
10 TraesCS4A01G254700 chr7D 95.000 320 11 3 882 1199 94792494 94792810 8.710000e-137 497.0
11 TraesCS4A01G254700 chr7D 92.880 309 18 4 882 1186 529767686 529767994 3.200000e-121 446.0
12 TraesCS4A01G254700 chr7D 85.354 198 17 6 3696 3885 529767994 529768187 1.280000e-45 195.0
13 TraesCS4A01G254700 chr7D 87.879 99 12 0 1198 1296 397999130 397999032 2.850000e-22 117.0
14 TraesCS4A01G254700 chr7D 96.000 50 2 0 832 881 94792518 94792469 1.040000e-11 82.4
15 TraesCS4A01G254700 chr7D 96.000 50 2 0 832 881 156074614 156074565 1.040000e-11 82.4
16 TraesCS4A01G254700 chr7D 96.000 50 2 0 832 881 563695780 563695731 1.040000e-11 82.4
17 TraesCS4A01G254700 chr7D 94.340 53 3 0 829 881 563701273 563701325 1.040000e-11 82.4
18 TraesCS4A01G254700 chr2A 96.500 3000 93 8 882 3878 25047783 25044793 0.000000e+00 4948.0
19 TraesCS4A01G254700 chr2A 84.965 572 47 13 3340 3879 88322730 88323294 1.100000e-150 544.0
20 TraesCS4A01G254700 chr2A 96.000 50 2 0 832 881 25047759 25047808 1.040000e-11 82.4
21 TraesCS4A01G254700 chr2B 93.223 3010 178 12 882 3879 173186309 173189304 0.000000e+00 4405.0
22 TraesCS4A01G254700 chr2B 82.578 1257 214 5 1273 2527 34337499 34338752 0.000000e+00 1103.0
23 TraesCS4A01G254700 chr7B 81.579 2242 396 16 1273 3506 37118011 37115779 0.000000e+00 1836.0
24 TraesCS4A01G254700 chr3A 81.788 2081 360 10 1418 3495 698263422 698261358 0.000000e+00 1725.0
25 TraesCS4A01G254700 chr4D 88.279 674 33 22 3879 4509 35379689 35379019 0.000000e+00 765.0
26 TraesCS4A01G254700 chr4D 85.544 671 44 24 31 694 35614922 35615546 0.000000e+00 652.0
27 TraesCS4A01G254700 chr4D 87.246 541 35 11 194 722 35404519 35404001 1.810000e-163 586.0
28 TraesCS4A01G254700 chr4D 83.679 386 15 19 4147 4509 35618773 35619133 2.020000e-83 320.0
29 TraesCS4A01G254700 chr4D 92.157 153 5 4 3997 4148 35618545 35618691 4.570000e-50 209.0
30 TraesCS4A01G254700 chr4D 87.970 133 4 3 3879 3999 35617842 35617974 3.640000e-31 147.0
31 TraesCS4A01G254700 chr4B 86.706 677 29 24 3879 4511 51636799 51636140 0.000000e+00 695.0
32 TraesCS4A01G254700 chr4B 87.647 510 29 16 188 694 51639976 51639498 3.050000e-156 562.0
33 TraesCS4A01G254700 chr4B 87.071 495 33 9 188 680 51838685 51839150 8.590000e-147 531.0
34 TraesCS4A01G254700 chr4B 86.042 480 24 19 4060 4511 51861668 51862132 4.080000e-130 475.0
35 TraesCS4A01G254700 chr4B 96.000 75 3 0 3879 3953 51861556 51861630 6.130000e-24 122.0
36 TraesCS4A01G254700 chr4B 100.000 29 0 0 3953 3981 51861642 51861670 2.000000e-03 54.7
37 TraesCS4A01G254700 chr6A 84.615 572 48 15 3340 3879 214570937 214570374 2.390000e-147 532.0
38 TraesCS4A01G254700 chr6A 86.026 229 18 8 3661 3878 46577587 46577362 2.710000e-57 233.0
39 TraesCS4A01G254700 chr5B 84.211 570 56 15 3340 3879 536844843 536845408 1.440000e-144 523.0
40 TraesCS4A01G254700 chr1D 93.506 308 17 3 882 1186 340561192 340561499 5.320000e-124 455.0
41 TraesCS4A01G254700 chr1D 85.340 191 16 6 3696 3878 340561499 340561685 2.140000e-43 187.0
42 TraesCS4A01G254700 chr3B 84.942 259 36 3 1022 1279 781037413 781037669 4.480000e-65 259.0
43 TraesCS4A01G254700 chr1A 79.114 158 21 6 3728 3878 22336093 22336245 1.030000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G254700 chr4A 566904182 566908692 4510 True 8331.000000 8331 100.0000 1 4511 1 chr4A.!!$R1 4510
1 TraesCS4A01G254700 chr4A 617930348 617932584 2236 True 1899.000000 1899 82.0730 1274 3511 1 chr4A.!!$R2 2237
2 TraesCS4A01G254700 chr4A 621423382 621425620 2238 True 1882.000000 1882 81.8950 1273 3514 1 chr4A.!!$R3 2241
3 TraesCS4A01G254700 chr4A 35255911 35258131 2220 False 1653.000000 1653 80.2150 1274 3494 1 chr4A.!!$F1 2220
4 TraesCS4A01G254700 chr4A 567213999 567216491 2492 False 812.000000 857 89.6780 196 4511 2 chr4A.!!$F2 4315
5 TraesCS4A01G254700 chr7D 156074590 156077580 2990 False 4920.000000 4920 96.3360 882 3878 1 chr7D.!!$F1 2996
6 TraesCS4A01G254700 chr7D 563695756 563701325 5569 False 2554.700000 5027 95.6380 829 3880 2 chr7D.!!$F4 3051
7 TraesCS4A01G254700 chr7D 563700116 563701300 1184 True 1989.000000 1989 96.9700 882 2067 1 chr7D.!!$R5 1185
8 TraesCS4A01G254700 chr7D 94792494 94793246 752 False 597.000000 697 94.9390 882 3880 2 chr7D.!!$F2 2998
9 TraesCS4A01G254700 chr7D 529767686 529768187 501 False 320.500000 446 89.1170 882 3885 2 chr7D.!!$F3 3003
10 TraesCS4A01G254700 chr2A 25044793 25047783 2990 True 4948.000000 4948 96.5000 882 3878 1 chr2A.!!$R1 2996
11 TraesCS4A01G254700 chr2A 88322730 88323294 564 False 544.000000 544 84.9650 3340 3879 1 chr2A.!!$F2 539
12 TraesCS4A01G254700 chr2B 173186309 173189304 2995 False 4405.000000 4405 93.2230 882 3879 1 chr2B.!!$F2 2997
13 TraesCS4A01G254700 chr2B 34337499 34338752 1253 False 1103.000000 1103 82.5780 1273 2527 1 chr2B.!!$F1 1254
14 TraesCS4A01G254700 chr7B 37115779 37118011 2232 True 1836.000000 1836 81.5790 1273 3506 1 chr7B.!!$R1 2233
15 TraesCS4A01G254700 chr3A 698261358 698263422 2064 True 1725.000000 1725 81.7880 1418 3495 1 chr3A.!!$R1 2077
16 TraesCS4A01G254700 chr4D 35379019 35379689 670 True 765.000000 765 88.2790 3879 4509 1 chr4D.!!$R1 630
17 TraesCS4A01G254700 chr4D 35404001 35404519 518 True 586.000000 586 87.2460 194 722 1 chr4D.!!$R2 528
18 TraesCS4A01G254700 chr4D 35614922 35619133 4211 False 332.000000 652 87.3375 31 4509 4 chr4D.!!$F1 4478
19 TraesCS4A01G254700 chr4B 51636140 51639976 3836 True 628.500000 695 87.1765 188 4511 2 chr4B.!!$R1 4323
20 TraesCS4A01G254700 chr4B 51861556 51862132 576 False 217.233333 475 94.0140 3879 4511 3 chr4B.!!$F2 632
21 TraesCS4A01G254700 chr6A 214570374 214570937 563 True 532.000000 532 84.6150 3340 3879 1 chr6A.!!$R2 539
22 TraesCS4A01G254700 chr5B 536844843 536845408 565 False 523.000000 523 84.2110 3340 3879 1 chr5B.!!$F1 539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 379 0.032540 TGATGGGATGAGACGCGATG 59.967 55.000 15.93 0.0 0.00 3.84 F
875 876 0.035458 CCATGGCCGGTCCTAGAATC 59.965 60.000 2.12 0.0 35.26 2.52 F
880 881 0.178068 GCCGGTCCTAGAATCAAGCA 59.822 55.000 1.90 0.0 0.00 3.91 F
2675 4741 1.755959 TGGTATGGTCATTTGGCATGC 59.244 47.619 9.90 9.9 0.00 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 3839 3.444703 AGTTTCTCATTCGATCCTCGG 57.555 47.619 0.0 0.0 40.88 4.63 R
2374 4433 5.623824 GCACAACTCCGAAGAAGGTAATAGA 60.624 44.000 0.0 0.0 0.00 1.98 R
3287 5364 7.928706 CAGGAACAGTTAAGAGGATTCGATAAT 59.071 37.037 0.0 0.0 0.00 1.28 R
4470 9358 0.739813 AACGTCGCATCAACCTAGGC 60.740 55.000 9.3 0.0 0.00 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 1.136305 ACGAGCTAATCTTTGCGCCTA 59.864 47.619 4.18 0.00 34.13 3.93
66 67 1.523095 GCTAATCTTTGCGCCTAGTCG 59.477 52.381 4.18 0.00 0.00 4.18
67 68 2.810650 CTAATCTTTGCGCCTAGTCGT 58.189 47.619 4.18 0.00 0.00 4.34
68 69 1.359848 AATCTTTGCGCCTAGTCGTG 58.640 50.000 4.18 0.00 0.00 4.35
69 70 0.460284 ATCTTTGCGCCTAGTCGTGG 60.460 55.000 4.18 0.00 0.00 4.94
70 71 2.740714 CTTTGCGCCTAGTCGTGGC 61.741 63.158 4.18 0.00 46.42 5.01
89 90 2.601804 GCACGAACACTGGTTTTGTTT 58.398 42.857 0.00 0.00 37.31 2.83
93 94 4.499040 CACGAACACTGGTTTTGTTTGATC 59.501 41.667 9.02 0.00 39.75 2.92
103 104 1.923356 TTGTTTGATCCTCCAAGCCC 58.077 50.000 0.00 0.00 0.00 5.19
116 117 0.961753 CAAGCCCTGTTCAAAGGTCC 59.038 55.000 0.00 0.00 35.34 4.46
131 132 0.466124 GGTCCAGGATCTTTCCCTCG 59.534 60.000 0.00 0.00 43.76 4.63
132 133 1.196012 GTCCAGGATCTTTCCCTCGT 58.804 55.000 0.00 0.00 43.76 4.18
133 134 1.137282 GTCCAGGATCTTTCCCTCGTC 59.863 57.143 0.00 0.00 43.76 4.20
134 135 1.195115 CCAGGATCTTTCCCTCGTCA 58.805 55.000 0.00 0.00 43.76 4.35
135 136 1.134670 CCAGGATCTTTCCCTCGTCAC 60.135 57.143 0.00 0.00 43.76 3.67
136 137 1.134670 CAGGATCTTTCCCTCGTCACC 60.135 57.143 0.00 0.00 43.76 4.02
137 138 1.196012 GGATCTTTCCCTCGTCACCT 58.804 55.000 0.00 0.00 35.84 4.00
138 139 1.555533 GGATCTTTCCCTCGTCACCTT 59.444 52.381 0.00 0.00 35.84 3.50
139 140 2.027100 GGATCTTTCCCTCGTCACCTTT 60.027 50.000 0.00 0.00 35.84 3.11
140 141 3.559384 GGATCTTTCCCTCGTCACCTTTT 60.559 47.826 0.00 0.00 35.84 2.27
141 142 3.570912 TCTTTCCCTCGTCACCTTTTT 57.429 42.857 0.00 0.00 0.00 1.94
166 167 1.168714 AGAAAACAGCAATCTCCGGC 58.831 50.000 0.00 0.00 0.00 6.13
177 178 2.628178 CAATCTCCGGCAGTACCATAGA 59.372 50.000 0.00 0.00 39.03 1.98
251 252 6.330278 CGTACACACATGACATATATAGGGG 58.670 44.000 0.00 0.00 0.00 4.79
274 275 2.985539 CTAGAGCTGCTAGGCCGGGA 62.986 65.000 0.15 0.00 42.41 5.14
345 346 9.692325 GCCTAGAAATTTATGGAATCCTATCAT 57.308 33.333 0.00 0.00 0.00 2.45
348 349 8.798859 AGAAATTTATGGAATCCTATCATCGG 57.201 34.615 0.00 0.00 0.00 4.18
349 350 7.337942 AGAAATTTATGGAATCCTATCATCGGC 59.662 37.037 0.00 0.00 0.00 5.54
350 351 5.762179 TTTATGGAATCCTATCATCGGCT 57.238 39.130 0.00 0.00 0.00 5.52
351 352 3.623906 ATGGAATCCTATCATCGGCTG 57.376 47.619 0.00 0.00 0.00 4.85
352 353 1.625315 TGGAATCCTATCATCGGCTGG 59.375 52.381 0.00 0.00 0.00 4.85
353 354 1.677217 GGAATCCTATCATCGGCTGGC 60.677 57.143 0.00 0.00 0.00 4.85
354 355 1.002430 GAATCCTATCATCGGCTGGCA 59.998 52.381 1.08 0.00 0.00 4.92
355 356 1.283347 ATCCTATCATCGGCTGGCAT 58.717 50.000 1.08 0.00 0.00 4.40
356 357 0.322648 TCCTATCATCGGCTGGCATG 59.677 55.000 1.08 4.84 0.00 4.06
357 358 0.675837 CCTATCATCGGCTGGCATGG 60.676 60.000 1.08 0.00 0.00 3.66
358 359 0.322648 CTATCATCGGCTGGCATGGA 59.677 55.000 1.08 0.00 0.00 3.41
359 360 0.986527 TATCATCGGCTGGCATGGAT 59.013 50.000 1.08 3.15 0.00 3.41
360 361 0.608308 ATCATCGGCTGGCATGGATG 60.608 55.000 13.33 13.33 38.06 3.51
361 362 1.228033 CATCGGCTGGCATGGATGA 60.228 57.895 13.98 0.00 38.80 2.92
362 363 0.608308 CATCGGCTGGCATGGATGAT 60.608 55.000 13.98 0.00 38.80 2.45
363 364 0.608308 ATCGGCTGGCATGGATGATG 60.608 55.000 1.08 0.00 34.84 3.07
364 365 2.265904 CGGCTGGCATGGATGATGG 61.266 63.158 1.08 0.00 31.99 3.51
365 366 1.906824 GGCTGGCATGGATGATGGG 60.907 63.158 0.00 0.00 31.99 4.00
366 367 1.152138 GCTGGCATGGATGATGGGA 59.848 57.895 0.00 0.00 31.99 4.37
367 368 0.251653 GCTGGCATGGATGATGGGAT 60.252 55.000 0.00 0.00 31.99 3.85
368 369 1.545841 CTGGCATGGATGATGGGATG 58.454 55.000 0.00 0.00 31.99 3.51
369 370 1.074889 CTGGCATGGATGATGGGATGA 59.925 52.381 0.00 0.00 31.99 2.92
370 371 1.074889 TGGCATGGATGATGGGATGAG 59.925 52.381 0.00 0.00 31.99 2.90
371 372 1.353358 GGCATGGATGATGGGATGAGA 59.647 52.381 0.00 0.00 31.99 3.27
372 373 2.434428 GCATGGATGATGGGATGAGAC 58.566 52.381 0.00 0.00 31.99 3.36
373 374 2.696506 CATGGATGATGGGATGAGACG 58.303 52.381 0.00 0.00 0.00 4.18
374 375 0.394192 TGGATGATGGGATGAGACGC 59.606 55.000 0.00 0.00 0.00 5.19
375 376 0.668706 GGATGATGGGATGAGACGCG 60.669 60.000 3.53 3.53 0.00 6.01
376 377 0.315251 GATGATGGGATGAGACGCGA 59.685 55.000 15.93 0.00 0.00 5.87
377 378 0.972134 ATGATGGGATGAGACGCGAT 59.028 50.000 15.93 0.00 0.00 4.58
378 379 0.032540 TGATGGGATGAGACGCGATG 59.967 55.000 15.93 0.00 0.00 3.84
379 380 1.287730 GATGGGATGAGACGCGATGC 61.288 60.000 15.93 0.00 0.00 3.91
423 424 2.749441 GGCACCAGCTCAGCTTCC 60.749 66.667 0.00 0.00 36.40 3.46
424 425 2.350514 GCACCAGCTCAGCTTCCT 59.649 61.111 0.00 0.00 36.40 3.36
425 426 1.744741 GCACCAGCTCAGCTTCCTC 60.745 63.158 0.00 0.00 36.40 3.71
426 427 1.447489 CACCAGCTCAGCTTCCTCG 60.447 63.158 0.00 0.00 36.40 4.63
427 428 1.910772 ACCAGCTCAGCTTCCTCGT 60.911 57.895 0.00 0.00 36.40 4.18
428 429 1.447489 CCAGCTCAGCTTCCTCGTG 60.447 63.158 0.00 0.00 36.40 4.35
429 430 1.447489 CAGCTCAGCTTCCTCGTGG 60.447 63.158 0.00 0.00 36.40 4.94
430 431 2.817396 GCTCAGCTTCCTCGTGGC 60.817 66.667 0.00 0.00 0.00 5.01
431 432 2.125350 CTCAGCTTCCTCGTGGCC 60.125 66.667 0.00 0.00 0.00 5.36
432 433 3.997064 CTCAGCTTCCTCGTGGCCG 62.997 68.421 0.00 0.00 0.00 6.13
433 434 4.069232 CAGCTTCCTCGTGGCCGA 62.069 66.667 0.00 0.00 41.73 5.54
434 435 4.070552 AGCTTCCTCGTGGCCGAC 62.071 66.667 0.00 0.00 38.40 4.79
435 436 4.373116 GCTTCCTCGTGGCCGACA 62.373 66.667 0.00 0.00 38.40 4.35
436 437 2.432628 CTTCCTCGTGGCCGACAC 60.433 66.667 0.00 0.00 46.78 3.67
445 446 1.717194 GTGGCCGACACGATTAAAGA 58.283 50.000 0.00 0.00 40.85 2.52
446 447 2.070783 GTGGCCGACACGATTAAAGAA 58.929 47.619 0.00 0.00 40.85 2.52
447 448 2.093783 GTGGCCGACACGATTAAAGAAG 59.906 50.000 0.00 0.00 40.85 2.85
448 449 1.062148 GGCCGACACGATTAAAGAAGC 59.938 52.381 0.00 0.00 0.00 3.86
455 456 0.938008 CGATTAAAGAAGCGCCTCCC 59.062 55.000 2.29 0.00 37.69 4.30
456 457 1.473434 CGATTAAAGAAGCGCCTCCCT 60.473 52.381 2.29 0.00 37.69 4.20
457 458 2.214347 GATTAAAGAAGCGCCTCCCTC 58.786 52.381 2.29 0.00 0.00 4.30
458 459 0.252197 TTAAAGAAGCGCCTCCCTCC 59.748 55.000 2.29 0.00 0.00 4.30
459 460 1.623542 TAAAGAAGCGCCTCCCTCCC 61.624 60.000 2.29 0.00 0.00 4.30
485 486 4.790962 GCCAGCAGCAGCAGCCTA 62.791 66.667 6.10 0.00 45.49 3.93
486 487 2.192443 CCAGCAGCAGCAGCCTAT 59.808 61.111 6.10 0.00 45.49 2.57
487 488 1.892862 CCAGCAGCAGCAGCCTATC 60.893 63.158 6.10 0.00 45.49 2.08
488 489 1.146485 CAGCAGCAGCAGCCTATCT 59.854 57.895 6.10 0.00 45.49 1.98
489 490 0.881159 CAGCAGCAGCAGCCTATCTC 60.881 60.000 6.10 0.00 45.49 2.75
490 491 1.955157 GCAGCAGCAGCCTATCTCG 60.955 63.158 0.00 0.00 43.56 4.04
491 492 1.440893 CAGCAGCAGCCTATCTCGT 59.559 57.895 0.00 0.00 43.56 4.18
492 493 0.597118 CAGCAGCAGCCTATCTCGTC 60.597 60.000 0.00 0.00 43.56 4.20
493 494 1.300542 GCAGCAGCCTATCTCGTCC 60.301 63.158 0.00 0.00 33.58 4.79
494 495 2.021068 GCAGCAGCCTATCTCGTCCA 62.021 60.000 0.00 0.00 33.58 4.02
495 496 0.678395 CAGCAGCCTATCTCGTCCAT 59.322 55.000 0.00 0.00 0.00 3.41
496 497 0.965439 AGCAGCCTATCTCGTCCATC 59.035 55.000 0.00 0.00 0.00 3.51
497 498 0.387878 GCAGCCTATCTCGTCCATCG 60.388 60.000 0.00 0.00 41.41 3.84
498 499 0.955178 CAGCCTATCTCGTCCATCGT 59.045 55.000 0.00 0.00 40.80 3.73
499 500 1.068885 CAGCCTATCTCGTCCATCGTC 60.069 57.143 0.00 0.00 40.80 4.20
500 501 1.202830 AGCCTATCTCGTCCATCGTCT 60.203 52.381 0.00 0.00 40.80 4.18
501 502 1.198178 GCCTATCTCGTCCATCGTCTC 59.802 57.143 0.00 0.00 40.80 3.36
502 503 1.461512 CCTATCTCGTCCATCGTCTCG 59.538 57.143 0.00 0.00 40.80 4.04
503 504 2.136728 CTATCTCGTCCATCGTCTCGT 58.863 52.381 0.00 0.00 40.80 4.18
504 505 0.938713 ATCTCGTCCATCGTCTCGTC 59.061 55.000 0.00 0.00 40.80 4.20
505 506 0.108281 TCTCGTCCATCGTCTCGTCT 60.108 55.000 0.00 0.00 40.80 4.18
506 507 0.302288 CTCGTCCATCGTCTCGTCTC 59.698 60.000 0.00 0.00 40.80 3.36
507 508 0.108281 TCGTCCATCGTCTCGTCTCT 60.108 55.000 0.00 0.00 40.80 3.10
508 509 0.302288 CGTCCATCGTCTCGTCTCTC 59.698 60.000 0.00 0.00 34.52 3.20
509 510 0.302288 GTCCATCGTCTCGTCTCTCG 59.698 60.000 0.00 0.00 41.41 4.04
510 511 1.010574 CCATCGTCTCGTCTCTCGC 60.011 63.158 0.00 0.00 39.67 5.03
511 512 1.010574 CATCGTCTCGTCTCTCGCC 60.011 63.158 0.00 0.00 39.67 5.54
512 513 2.526993 ATCGTCTCGTCTCTCGCCG 61.527 63.158 0.00 0.00 39.67 6.46
513 514 4.872485 CGTCTCGTCTCTCGCCGC 62.872 72.222 0.00 0.00 39.67 6.53
514 515 3.501548 GTCTCGTCTCTCGCCGCT 61.502 66.667 0.00 0.00 39.67 5.52
515 516 3.500642 TCTCGTCTCTCGCCGCTG 61.501 66.667 0.00 0.00 39.67 5.18
533 534 3.853330 CACCGCCGCGATGTCAAG 61.853 66.667 15.93 0.00 0.00 3.02
534 535 4.373116 ACCGCCGCGATGTCAAGT 62.373 61.111 15.93 0.00 0.00 3.16
535 536 3.554692 CCGCCGCGATGTCAAGTC 61.555 66.667 15.93 0.00 0.00 3.01
536 537 3.554692 CGCCGCGATGTCAAGTCC 61.555 66.667 8.23 0.00 0.00 3.85
537 538 3.195698 GCCGCGATGTCAAGTCCC 61.196 66.667 8.23 0.00 0.00 4.46
538 539 2.885644 CCGCGATGTCAAGTCCCG 60.886 66.667 8.23 0.00 0.00 5.14
539 540 2.126071 CGCGATGTCAAGTCCCGT 60.126 61.111 0.00 0.00 0.00 5.28
540 541 2.158959 CGCGATGTCAAGTCCCGTC 61.159 63.158 0.00 0.00 0.00 4.79
541 542 1.215647 GCGATGTCAAGTCCCGTCT 59.784 57.895 0.00 0.00 0.00 4.18
542 543 1.078759 GCGATGTCAAGTCCCGTCTG 61.079 60.000 0.00 0.00 0.00 3.51
543 544 1.078759 CGATGTCAAGTCCCGTCTGC 61.079 60.000 0.00 0.00 0.00 4.26
544 545 1.078759 GATGTCAAGTCCCGTCTGCG 61.079 60.000 0.00 0.00 37.95 5.18
564 565 2.969628 GACATGTCCAGATTCCGACT 57.030 50.000 15.31 0.00 0.00 4.18
565 566 2.544685 GACATGTCCAGATTCCGACTG 58.455 52.381 15.31 0.00 35.43 3.51
569 570 2.202932 CCAGATTCCGACTGGCCG 60.203 66.667 0.00 0.00 46.30 6.13
602 603 2.897350 GCCCAAAGCGATCGAGGG 60.897 66.667 21.57 22.48 42.55 4.30
603 604 2.203070 CCCAAAGCGATCGAGGGG 60.203 66.667 21.57 18.15 35.83 4.79
604 605 2.731571 CCCAAAGCGATCGAGGGGA 61.732 63.158 21.57 0.00 37.80 4.81
605 606 1.447643 CCAAAGCGATCGAGGGGAT 59.552 57.895 21.57 0.00 38.35 3.85
606 607 0.882042 CCAAAGCGATCGAGGGGATG 60.882 60.000 21.57 7.93 34.82 3.51
607 608 0.882042 CAAAGCGATCGAGGGGATGG 60.882 60.000 21.57 0.00 34.82 3.51
608 609 1.048724 AAAGCGATCGAGGGGATGGA 61.049 55.000 21.57 0.00 34.82 3.41
609 610 0.833834 AAGCGATCGAGGGGATGGAT 60.834 55.000 21.57 0.00 34.82 3.41
610 611 1.216710 GCGATCGAGGGGATGGATC 59.783 63.158 21.57 0.00 39.18 3.36
611 612 1.536073 GCGATCGAGGGGATGGATCA 61.536 60.000 21.57 0.00 41.80 2.92
612 613 0.529833 CGATCGAGGGGATGGATCAG 59.470 60.000 10.26 0.00 41.80 2.90
613 614 0.901124 GATCGAGGGGATGGATCAGG 59.099 60.000 0.00 0.00 41.46 3.86
614 615 0.489117 ATCGAGGGGATGGATCAGGA 59.511 55.000 0.00 0.00 32.92 3.86
615 616 0.264657 TCGAGGGGATGGATCAGGAA 59.735 55.000 0.00 0.00 0.00 3.36
616 617 1.132721 TCGAGGGGATGGATCAGGAAT 60.133 52.381 0.00 0.00 0.00 3.01
617 618 2.111792 TCGAGGGGATGGATCAGGAATA 59.888 50.000 0.00 0.00 0.00 1.75
618 619 2.234908 CGAGGGGATGGATCAGGAATAC 59.765 54.545 0.00 0.00 0.00 1.89
619 620 2.573915 GAGGGGATGGATCAGGAATACC 59.426 54.545 0.00 0.00 0.00 2.73
620 621 1.279271 GGGGATGGATCAGGAATACCG 59.721 57.143 0.00 0.00 41.83 4.02
621 622 2.257207 GGGATGGATCAGGAATACCGA 58.743 52.381 0.00 0.00 41.83 4.69
622 623 2.637872 GGGATGGATCAGGAATACCGAA 59.362 50.000 0.00 0.00 41.83 4.30
623 624 3.264450 GGGATGGATCAGGAATACCGAAT 59.736 47.826 0.00 0.00 41.83 3.34
624 625 4.508662 GGATGGATCAGGAATACCGAATC 58.491 47.826 0.00 0.00 41.83 2.52
625 626 4.020218 GGATGGATCAGGAATACCGAATCA 60.020 45.833 0.00 0.00 41.83 2.57
626 627 4.336889 TGGATCAGGAATACCGAATCAC 57.663 45.455 0.00 0.00 41.83 3.06
627 628 3.709141 TGGATCAGGAATACCGAATCACA 59.291 43.478 0.00 0.00 41.83 3.58
628 629 4.163268 TGGATCAGGAATACCGAATCACAA 59.837 41.667 0.00 0.00 41.83 3.33
629 630 4.511826 GGATCAGGAATACCGAATCACAAC 59.488 45.833 0.00 0.00 41.83 3.32
630 631 4.819105 TCAGGAATACCGAATCACAACT 57.181 40.909 0.00 0.00 41.83 3.16
631 632 4.503910 TCAGGAATACCGAATCACAACTG 58.496 43.478 0.00 0.00 41.83 3.16
632 633 3.623060 CAGGAATACCGAATCACAACTGG 59.377 47.826 0.00 0.00 41.83 4.00
633 634 3.517901 AGGAATACCGAATCACAACTGGA 59.482 43.478 0.00 0.00 41.83 3.86
634 635 4.164221 AGGAATACCGAATCACAACTGGAT 59.836 41.667 0.00 0.00 41.83 3.41
635 636 4.881850 GGAATACCGAATCACAACTGGATT 59.118 41.667 0.00 0.00 37.67 3.01
636 637 5.220854 GGAATACCGAATCACAACTGGATTG 60.221 44.000 0.00 0.00 44.60 2.67
637 638 2.436417 ACCGAATCACAACTGGATTGG 58.564 47.619 0.00 0.00 43.20 3.16
638 639 2.224769 ACCGAATCACAACTGGATTGGT 60.225 45.455 0.00 0.00 43.20 3.67
639 640 2.819608 CCGAATCACAACTGGATTGGTT 59.180 45.455 0.00 0.00 43.20 3.67
640 641 4.006989 CCGAATCACAACTGGATTGGTTA 58.993 43.478 0.00 0.00 43.20 2.85
641 642 4.457603 CCGAATCACAACTGGATTGGTTAA 59.542 41.667 0.00 0.00 43.20 2.01
642 643 5.390613 CGAATCACAACTGGATTGGTTAAC 58.609 41.667 0.00 0.00 43.20 2.01
643 644 5.619086 CGAATCACAACTGGATTGGTTAACC 60.619 44.000 18.27 18.27 43.20 2.85
644 645 4.447138 TCACAACTGGATTGGTTAACCT 57.553 40.909 24.78 6.12 43.20 3.50
645 646 4.798882 TCACAACTGGATTGGTTAACCTT 58.201 39.130 24.78 12.77 43.20 3.50
646 647 5.205056 TCACAACTGGATTGGTTAACCTTT 58.795 37.500 24.78 12.41 43.20 3.11
647 648 5.659079 TCACAACTGGATTGGTTAACCTTTT 59.341 36.000 24.78 9.91 43.20 2.27
648 649 5.983118 CACAACTGGATTGGTTAACCTTTTC 59.017 40.000 24.78 17.12 43.20 2.29
649 650 5.659079 ACAACTGGATTGGTTAACCTTTTCA 59.341 36.000 24.78 15.34 43.20 2.69
650 651 6.326323 ACAACTGGATTGGTTAACCTTTTCAT 59.674 34.615 24.78 9.38 43.20 2.57
651 652 6.345096 ACTGGATTGGTTAACCTTTTCATG 57.655 37.500 24.78 15.21 36.82 3.07
652 653 5.146010 TGGATTGGTTAACCTTTTCATGC 57.854 39.130 24.78 13.79 36.82 4.06
653 654 4.020662 TGGATTGGTTAACCTTTTCATGCC 60.021 41.667 24.78 14.18 36.82 4.40
654 655 4.020662 GGATTGGTTAACCTTTTCATGCCA 60.021 41.667 24.78 0.00 36.82 4.92
655 656 5.512232 GGATTGGTTAACCTTTTCATGCCAA 60.512 40.000 24.78 7.66 38.81 4.52
656 657 5.359194 TTGGTTAACCTTTTCATGCCAAA 57.641 34.783 24.78 4.01 36.82 3.28
657 658 5.559148 TGGTTAACCTTTTCATGCCAAAT 57.441 34.783 24.78 0.00 36.82 2.32
658 659 5.303971 TGGTTAACCTTTTCATGCCAAATG 58.696 37.500 24.78 0.00 36.82 2.32
659 660 5.070981 TGGTTAACCTTTTCATGCCAAATGA 59.929 36.000 24.78 0.00 36.82 2.57
660 661 5.408299 GGTTAACCTTTTCATGCCAAATGAC 59.592 40.000 17.83 0.00 0.00 3.06
661 662 4.686191 AACCTTTTCATGCCAAATGACA 57.314 36.364 0.00 0.00 0.00 3.58
662 663 4.895668 ACCTTTTCATGCCAAATGACAT 57.104 36.364 0.00 0.00 0.00 3.06
663 664 5.231702 ACCTTTTCATGCCAAATGACATT 57.768 34.783 0.00 0.00 0.00 2.71
664 665 5.240121 ACCTTTTCATGCCAAATGACATTC 58.760 37.500 0.05 0.00 0.00 2.67
665 666 5.012354 ACCTTTTCATGCCAAATGACATTCT 59.988 36.000 0.05 0.00 0.00 2.40
666 667 5.935789 CCTTTTCATGCCAAATGACATTCTT 59.064 36.000 0.05 0.00 0.00 2.52
667 668 6.128391 CCTTTTCATGCCAAATGACATTCTTG 60.128 38.462 0.05 0.00 0.00 3.02
668 669 3.852286 TCATGCCAAATGACATTCTTGC 58.148 40.909 0.05 5.50 0.00 4.01
669 670 2.747396 TGCCAAATGACATTCTTGCC 57.253 45.000 0.05 0.00 0.00 4.52
670 671 1.275856 TGCCAAATGACATTCTTGCCC 59.724 47.619 0.05 0.00 0.00 5.36
671 672 1.405933 GCCAAATGACATTCTTGCCCC 60.406 52.381 0.05 0.00 0.00 5.80
672 673 2.181975 CCAAATGACATTCTTGCCCCT 58.818 47.619 0.05 0.00 0.00 4.79
673 674 2.167075 CCAAATGACATTCTTGCCCCTC 59.833 50.000 0.05 0.00 0.00 4.30
674 675 1.755179 AATGACATTCTTGCCCCTCG 58.245 50.000 0.00 0.00 0.00 4.63
675 676 0.620556 ATGACATTCTTGCCCCTCGT 59.379 50.000 0.00 0.00 0.00 4.18
676 677 0.036388 TGACATTCTTGCCCCTCGTC 60.036 55.000 0.00 0.00 0.00 4.20
677 678 0.250513 GACATTCTTGCCCCTCGTCT 59.749 55.000 0.00 0.00 0.00 4.18
678 679 0.693049 ACATTCTTGCCCCTCGTCTT 59.307 50.000 0.00 0.00 0.00 3.01
679 680 1.073923 ACATTCTTGCCCCTCGTCTTT 59.926 47.619 0.00 0.00 0.00 2.52
680 681 2.304761 ACATTCTTGCCCCTCGTCTTTA 59.695 45.455 0.00 0.00 0.00 1.85
681 682 3.054361 ACATTCTTGCCCCTCGTCTTTAT 60.054 43.478 0.00 0.00 0.00 1.40
682 683 3.713826 TTCTTGCCCCTCGTCTTTATT 57.286 42.857 0.00 0.00 0.00 1.40
683 684 4.829872 TTCTTGCCCCTCGTCTTTATTA 57.170 40.909 0.00 0.00 0.00 0.98
684 685 5.367945 TTCTTGCCCCTCGTCTTTATTAT 57.632 39.130 0.00 0.00 0.00 1.28
685 686 4.703897 TCTTGCCCCTCGTCTTTATTATG 58.296 43.478 0.00 0.00 0.00 1.90
686 687 3.485463 TGCCCCTCGTCTTTATTATGG 57.515 47.619 0.00 0.00 0.00 2.74
687 688 3.042682 TGCCCCTCGTCTTTATTATGGA 58.957 45.455 0.00 0.00 0.00 3.41
688 689 3.071023 TGCCCCTCGTCTTTATTATGGAG 59.929 47.826 0.00 0.00 0.00 3.86
689 690 3.071167 GCCCCTCGTCTTTATTATGGAGT 59.929 47.826 0.00 0.00 0.00 3.85
690 691 4.444449 GCCCCTCGTCTTTATTATGGAGTT 60.444 45.833 0.00 0.00 0.00 3.01
691 692 5.057149 CCCCTCGTCTTTATTATGGAGTTG 58.943 45.833 0.00 0.00 0.00 3.16
692 693 5.163343 CCCCTCGTCTTTATTATGGAGTTGA 60.163 44.000 0.00 0.00 0.00 3.18
693 694 6.346096 CCCTCGTCTTTATTATGGAGTTGAA 58.654 40.000 0.00 0.00 0.00 2.69
694 695 6.821665 CCCTCGTCTTTATTATGGAGTTGAAA 59.178 38.462 0.00 0.00 0.00 2.69
695 696 7.335924 CCCTCGTCTTTATTATGGAGTTGAAAA 59.664 37.037 0.00 0.00 0.00 2.29
696 697 8.726988 CCTCGTCTTTATTATGGAGTTGAAAAA 58.273 33.333 0.00 0.00 0.00 1.94
723 724 8.709386 AAGATATATCATCCGATCGAAAAAGG 57.291 34.615 18.66 0.00 32.73 3.11
724 725 7.268586 AGATATATCATCCGATCGAAAAAGGG 58.731 38.462 18.66 0.00 32.73 3.95
725 726 3.838244 ATCATCCGATCGAAAAAGGGA 57.162 42.857 18.66 3.29 0.00 4.20
726 727 3.620427 TCATCCGATCGAAAAAGGGAA 57.380 42.857 18.66 0.00 0.00 3.97
727 728 4.150897 TCATCCGATCGAAAAAGGGAAT 57.849 40.909 18.66 0.00 0.00 3.01
728 729 4.523083 TCATCCGATCGAAAAAGGGAATT 58.477 39.130 18.66 0.00 0.00 2.17
729 730 4.574828 TCATCCGATCGAAAAAGGGAATTC 59.425 41.667 18.66 0.00 0.00 2.17
731 732 2.031683 CCGATCGAAAAAGGGAATTCGG 59.968 50.000 18.66 2.76 46.22 4.30
732 733 2.031683 CGATCGAAAAAGGGAATTCGGG 59.968 50.000 10.26 0.00 46.22 5.14
733 734 1.170442 TCGAAAAAGGGAATTCGGGC 58.830 50.000 7.90 0.00 46.22 6.13
734 735 1.173913 CGAAAAAGGGAATTCGGGCT 58.826 50.000 0.00 0.00 43.41 5.19
735 736 1.135402 CGAAAAAGGGAATTCGGGCTG 60.135 52.381 0.00 0.00 43.41 4.85
736 737 0.608130 AAAAAGGGAATTCGGGCTGC 59.392 50.000 0.00 0.00 0.00 5.25
737 738 1.595093 AAAAGGGAATTCGGGCTGCG 61.595 55.000 0.00 0.00 0.00 5.18
738 739 2.764637 AAAGGGAATTCGGGCTGCGT 62.765 55.000 0.00 0.00 0.00 5.24
739 740 3.202706 GGGAATTCGGGCTGCGTC 61.203 66.667 0.00 0.00 0.00 5.19
740 741 3.564027 GGAATTCGGGCTGCGTCG 61.564 66.667 0.00 7.53 0.00 5.12
741 742 2.813908 GAATTCGGGCTGCGTCGT 60.814 61.111 12.30 0.00 0.00 4.34
742 743 2.358247 AATTCGGGCTGCGTCGTT 60.358 55.556 12.30 0.56 0.00 3.85
743 744 2.563086 GAATTCGGGCTGCGTCGTTG 62.563 60.000 12.30 0.00 0.00 4.10
747 748 3.723348 GGGCTGCGTCGTTGGTTC 61.723 66.667 0.00 0.00 0.00 3.62
748 749 2.970324 GGCTGCGTCGTTGGTTCA 60.970 61.111 0.00 0.00 0.00 3.18
749 750 2.551270 GCTGCGTCGTTGGTTCAG 59.449 61.111 0.00 0.00 0.00 3.02
750 751 2.954753 GCTGCGTCGTTGGTTCAGG 61.955 63.158 0.00 0.00 0.00 3.86
751 752 2.954753 CTGCGTCGTTGGTTCAGGC 61.955 63.158 0.00 0.00 0.00 4.85
752 753 4.072088 GCGTCGTTGGTTCAGGCG 62.072 66.667 0.00 0.00 0.00 5.52
753 754 2.660552 CGTCGTTGGTTCAGGCGT 60.661 61.111 0.00 0.00 0.00 5.68
754 755 2.241880 CGTCGTTGGTTCAGGCGTT 61.242 57.895 0.00 0.00 0.00 4.84
755 756 1.768112 CGTCGTTGGTTCAGGCGTTT 61.768 55.000 0.00 0.00 0.00 3.60
756 757 0.316689 GTCGTTGGTTCAGGCGTTTG 60.317 55.000 0.00 0.00 0.00 2.93
757 758 0.462225 TCGTTGGTTCAGGCGTTTGA 60.462 50.000 0.00 0.00 0.00 2.69
758 759 0.041312 CGTTGGTTCAGGCGTTTGAG 60.041 55.000 0.00 0.00 0.00 3.02
759 760 1.021968 GTTGGTTCAGGCGTTTGAGT 58.978 50.000 0.00 0.00 0.00 3.41
760 761 1.002792 GTTGGTTCAGGCGTTTGAGTC 60.003 52.381 0.00 0.00 0.00 3.36
761 762 0.878523 TGGTTCAGGCGTTTGAGTCG 60.879 55.000 0.00 0.00 0.00 4.18
762 763 1.566018 GGTTCAGGCGTTTGAGTCGG 61.566 60.000 0.00 0.00 0.00 4.79
763 764 1.301401 TTCAGGCGTTTGAGTCGGG 60.301 57.895 0.00 0.00 0.00 5.14
764 765 2.030562 CAGGCGTTTGAGTCGGGT 59.969 61.111 0.00 0.00 0.00 5.28
765 766 1.597027 CAGGCGTTTGAGTCGGGTT 60.597 57.895 0.00 0.00 0.00 4.11
766 767 1.147600 AGGCGTTTGAGTCGGGTTT 59.852 52.632 0.00 0.00 0.00 3.27
767 768 0.464916 AGGCGTTTGAGTCGGGTTTT 60.465 50.000 0.00 0.00 0.00 2.43
768 769 0.382873 GGCGTTTGAGTCGGGTTTTT 59.617 50.000 0.00 0.00 0.00 1.94
769 770 1.472990 GCGTTTGAGTCGGGTTTTTG 58.527 50.000 0.00 0.00 0.00 2.44
770 771 1.202211 GCGTTTGAGTCGGGTTTTTGT 60.202 47.619 0.00 0.00 0.00 2.83
771 772 2.446282 CGTTTGAGTCGGGTTTTTGTG 58.554 47.619 0.00 0.00 0.00 3.33
772 773 2.096174 CGTTTGAGTCGGGTTTTTGTGA 59.904 45.455 0.00 0.00 0.00 3.58
773 774 3.242936 CGTTTGAGTCGGGTTTTTGTGAT 60.243 43.478 0.00 0.00 0.00 3.06
774 775 4.678622 GTTTGAGTCGGGTTTTTGTGATT 58.321 39.130 0.00 0.00 0.00 2.57
775 776 4.993029 TTGAGTCGGGTTTTTGTGATTT 57.007 36.364 0.00 0.00 0.00 2.17
776 777 6.267070 GTTTGAGTCGGGTTTTTGTGATTTA 58.733 36.000 0.00 0.00 0.00 1.40
777 778 6.642707 TTGAGTCGGGTTTTTGTGATTTAT 57.357 33.333 0.00 0.00 0.00 1.40
778 779 6.642707 TGAGTCGGGTTTTTGTGATTTATT 57.357 33.333 0.00 0.00 0.00 1.40
779 780 7.045126 TGAGTCGGGTTTTTGTGATTTATTT 57.955 32.000 0.00 0.00 0.00 1.40
780 781 6.920758 TGAGTCGGGTTTTTGTGATTTATTTG 59.079 34.615 0.00 0.00 0.00 2.32
781 782 6.811954 AGTCGGGTTTTTGTGATTTATTTGT 58.188 32.000 0.00 0.00 0.00 2.83
782 783 7.942990 AGTCGGGTTTTTGTGATTTATTTGTA 58.057 30.769 0.00 0.00 0.00 2.41
783 784 8.079809 AGTCGGGTTTTTGTGATTTATTTGTAG 58.920 33.333 0.00 0.00 0.00 2.74
784 785 7.327518 GTCGGGTTTTTGTGATTTATTTGTAGG 59.672 37.037 0.00 0.00 0.00 3.18
785 786 7.230913 TCGGGTTTTTGTGATTTATTTGTAGGA 59.769 33.333 0.00 0.00 0.00 2.94
786 787 7.868415 CGGGTTTTTGTGATTTATTTGTAGGAA 59.132 33.333 0.00 0.00 0.00 3.36
787 788 9.549078 GGGTTTTTGTGATTTATTTGTAGGAAA 57.451 29.630 0.00 0.00 0.00 3.13
801 802 6.435430 TTGTAGGAAACATGATGAATTCCG 57.565 37.500 20.51 0.00 39.79 4.30
802 803 5.739959 TGTAGGAAACATGATGAATTCCGA 58.260 37.500 20.51 16.03 39.79 4.55
803 804 6.356556 TGTAGGAAACATGATGAATTCCGAT 58.643 36.000 20.51 12.12 39.79 4.18
804 805 5.762825 AGGAAACATGATGAATTCCGATG 57.237 39.130 20.51 5.11 39.79 3.84
805 806 4.037208 AGGAAACATGATGAATTCCGATGC 59.963 41.667 20.51 5.54 39.79 3.91
806 807 4.037208 GGAAACATGATGAATTCCGATGCT 59.963 41.667 15.18 0.00 31.36 3.79
807 808 5.450965 GGAAACATGATGAATTCCGATGCTT 60.451 40.000 15.18 0.57 31.36 3.91
808 809 4.825546 ACATGATGAATTCCGATGCTTC 57.174 40.909 0.00 0.00 0.00 3.86
809 810 3.249320 ACATGATGAATTCCGATGCTTCG 59.751 43.478 14.61 14.61 45.08 3.79
810 811 2.905075 TGATGAATTCCGATGCTTCGT 58.095 42.857 19.21 2.12 43.97 3.85
811 812 2.866156 TGATGAATTCCGATGCTTCGTC 59.134 45.455 19.21 11.27 43.97 4.20
812 813 1.277326 TGAATTCCGATGCTTCGTCG 58.723 50.000 19.21 6.59 43.97 5.12
824 825 2.439701 TCGTCGGGCGAGAAGGAT 60.440 61.111 0.00 0.00 45.68 3.24
825 826 2.278857 CGTCGGGCGAGAAGGATG 60.279 66.667 0.00 0.00 44.77 3.51
826 827 2.771639 CGTCGGGCGAGAAGGATGA 61.772 63.158 0.00 0.00 44.77 2.92
827 828 1.515954 GTCGGGCGAGAAGGATGAA 59.484 57.895 0.00 0.00 0.00 2.57
828 829 0.806492 GTCGGGCGAGAAGGATGAAC 60.806 60.000 0.00 0.00 0.00 3.18
829 830 1.521681 CGGGCGAGAAGGATGAACC 60.522 63.158 0.00 0.00 39.35 3.62
830 831 1.521681 GGGCGAGAAGGATGAACCG 60.522 63.158 0.00 0.00 44.74 4.44
831 832 2.174319 GGCGAGAAGGATGAACCGC 61.174 63.158 0.00 0.00 44.74 5.68
832 833 2.517450 GCGAGAAGGATGAACCGCG 61.517 63.158 0.00 0.00 44.74 6.46
833 834 2.517450 CGAGAAGGATGAACCGCGC 61.517 63.158 0.00 0.00 44.74 6.86
834 835 1.153549 GAGAAGGATGAACCGCGCT 60.154 57.895 5.56 0.00 44.74 5.92
835 836 0.102481 GAGAAGGATGAACCGCGCTA 59.898 55.000 5.56 0.00 44.74 4.26
836 837 0.179108 AGAAGGATGAACCGCGCTAC 60.179 55.000 5.56 0.00 44.74 3.58
837 838 0.179108 GAAGGATGAACCGCGCTACT 60.179 55.000 5.56 0.00 44.74 2.57
838 839 0.179108 AAGGATGAACCGCGCTACTC 60.179 55.000 5.56 0.00 44.74 2.59
839 840 1.038130 AGGATGAACCGCGCTACTCT 61.038 55.000 5.56 0.00 44.74 3.24
840 841 0.666913 GGATGAACCGCGCTACTCTA 59.333 55.000 5.56 0.00 0.00 2.43
841 842 1.599916 GGATGAACCGCGCTACTCTAC 60.600 57.143 5.56 0.00 0.00 2.59
842 843 1.065102 GATGAACCGCGCTACTCTACA 59.935 52.381 5.56 0.00 0.00 2.74
843 844 0.169672 TGAACCGCGCTACTCTACAC 59.830 55.000 5.56 0.00 0.00 2.90
844 845 0.450983 GAACCGCGCTACTCTACACT 59.549 55.000 5.56 0.00 0.00 3.55
845 846 0.170561 AACCGCGCTACTCTACACTG 59.829 55.000 5.56 0.00 0.00 3.66
846 847 1.586564 CCGCGCTACTCTACACTGC 60.587 63.158 5.56 0.00 0.00 4.40
847 848 1.429825 CGCGCTACTCTACACTGCT 59.570 57.895 5.56 0.00 0.00 4.24
848 849 0.590230 CGCGCTACTCTACACTGCTC 60.590 60.000 5.56 0.00 0.00 4.26
849 850 0.736053 GCGCTACTCTACACTGCTCT 59.264 55.000 0.00 0.00 0.00 4.09
850 851 1.941294 GCGCTACTCTACACTGCTCTA 59.059 52.381 0.00 0.00 0.00 2.43
851 852 2.032377 GCGCTACTCTACACTGCTCTAG 60.032 54.545 0.00 0.00 0.00 2.43
852 853 3.459145 CGCTACTCTACACTGCTCTAGA 58.541 50.000 0.00 0.00 0.00 2.43
853 854 4.062293 CGCTACTCTACACTGCTCTAGAT 58.938 47.826 0.00 0.00 0.00 1.98
854 855 4.513692 CGCTACTCTACACTGCTCTAGATT 59.486 45.833 0.00 0.00 0.00 2.40
855 856 5.559991 CGCTACTCTACACTGCTCTAGATTG 60.560 48.000 0.00 0.00 0.00 2.67
856 857 4.647424 ACTCTACACTGCTCTAGATTGC 57.353 45.455 0.00 0.00 0.00 3.56
857 858 3.383185 ACTCTACACTGCTCTAGATTGCC 59.617 47.826 0.00 0.00 0.00 4.52
858 859 3.365472 TCTACACTGCTCTAGATTGCCA 58.635 45.455 0.00 0.00 0.00 4.92
859 860 3.963374 TCTACACTGCTCTAGATTGCCAT 59.037 43.478 0.00 0.00 0.00 4.40
860 861 2.915349 ACACTGCTCTAGATTGCCATG 58.085 47.619 0.00 0.00 0.00 3.66
861 862 2.219458 CACTGCTCTAGATTGCCATGG 58.781 52.381 7.63 7.63 0.00 3.66
862 863 1.236628 CTGCTCTAGATTGCCATGGC 58.763 55.000 30.54 30.54 42.35 4.40
863 864 0.179009 TGCTCTAGATTGCCATGGCC 60.179 55.000 33.44 18.48 41.09 5.36
864 865 1.233285 GCTCTAGATTGCCATGGCCG 61.233 60.000 33.44 14.40 41.09 6.13
865 866 0.604780 CTCTAGATTGCCATGGCCGG 60.605 60.000 33.44 16.06 41.09 6.13
866 867 1.149174 CTAGATTGCCATGGCCGGT 59.851 57.895 33.44 19.12 41.09 5.28
867 868 0.886490 CTAGATTGCCATGGCCGGTC 60.886 60.000 33.44 25.55 41.09 4.79
868 869 2.337879 TAGATTGCCATGGCCGGTCC 62.338 60.000 33.44 17.30 41.09 4.46
869 870 3.721370 GATTGCCATGGCCGGTCCT 62.721 63.158 33.44 11.57 41.09 3.85
870 871 2.337879 GATTGCCATGGCCGGTCCTA 62.338 60.000 33.44 10.68 41.09 2.94
871 872 2.343475 ATTGCCATGGCCGGTCCTAG 62.343 60.000 33.44 2.08 41.09 3.02
872 873 3.161450 GCCATGGCCGGTCCTAGA 61.161 66.667 27.24 0.00 35.26 2.43
873 874 2.742116 GCCATGGCCGGTCCTAGAA 61.742 63.158 27.24 0.00 35.26 2.10
874 875 2.056906 GCCATGGCCGGTCCTAGAAT 62.057 60.000 27.24 0.00 35.26 2.40
875 876 0.035458 CCATGGCCGGTCCTAGAATC 59.965 60.000 2.12 0.00 35.26 2.52
876 877 0.758734 CATGGCCGGTCCTAGAATCA 59.241 55.000 2.12 0.00 35.26 2.57
877 878 1.140852 CATGGCCGGTCCTAGAATCAA 59.859 52.381 2.12 0.00 35.26 2.57
878 879 0.830648 TGGCCGGTCCTAGAATCAAG 59.169 55.000 2.12 0.00 35.26 3.02
879 880 0.533085 GGCCGGTCCTAGAATCAAGC 60.533 60.000 1.90 0.00 0.00 4.01
880 881 0.178068 GCCGGTCCTAGAATCAAGCA 59.822 55.000 1.90 0.00 0.00 3.91
998 1002 8.482128 AGGTGTTCTCTCTCCATTTTCTATAAG 58.518 37.037 0.00 0.00 0.00 1.73
1057 1062 9.349145 CGAAAAGGAAAAAGAAGAAACTTGTAA 57.651 29.630 0.00 0.00 0.00 2.41
1168 1173 9.996554 TTCATAGTGTTGAAGAAGAACAATCTA 57.003 29.630 0.00 0.00 35.15 1.98
1265 1270 9.618890 TGATACTGAAAATCCTAAAGAAGATGG 57.381 33.333 0.00 0.00 0.00 3.51
1385 1390 9.927081 AAGGGATTTAAATCTTGTGTATCATCT 57.073 29.630 23.85 5.85 35.73 2.90
1431 1439 7.435068 TTCAAATGCCTACTACTCAAGAAAC 57.565 36.000 0.00 0.00 0.00 2.78
1702 3756 6.539464 TGACAAAGATTTGCAGCAAGAAATTT 59.461 30.769 8.12 5.99 41.79 1.82
1785 3839 8.532977 TTCTTGCTAAACATAATTTGGCTTTC 57.467 30.769 8.82 0.00 36.91 2.62
1888 3942 6.965866 TCCTATAATGCAGGACCATATTAGGT 59.034 38.462 0.00 0.00 46.82 3.08
2093 4147 4.944317 TGTGAGGTGTGTAAACATGTCAAA 59.056 37.500 0.00 0.00 0.00 2.69
2103 4157 8.561212 TGTGTAAACATGTCAAATAACACTACC 58.439 33.333 18.02 2.69 37.47 3.18
2344 4398 5.425217 TCCTGTCATAGCCTCAATCTTACAA 59.575 40.000 0.00 0.00 0.00 2.41
2636 4700 6.142817 CACATTCTTTGGTTACTGCACTTAC 58.857 40.000 0.00 0.00 0.00 2.34
2675 4741 1.755959 TGGTATGGTCATTTGGCATGC 59.244 47.619 9.90 9.90 0.00 4.06
3282 5359 5.416639 TGCAGATTGCTATCAAAATGTGTCT 59.583 36.000 10.78 0.00 45.31 3.41
3287 5364 9.399797 AGATTGCTATCAAAATGTGTCTATTGA 57.600 29.630 10.78 0.00 35.56 2.57
3345 5422 4.380974 GCATCTGCTGAAAGAAGTTTTTCG 59.619 41.667 0.00 0.00 41.84 3.46
3430 5508 3.428045 GGCCATGTGCTGTATTGAGAAAC 60.428 47.826 0.00 0.00 40.92 2.78
3614 5692 2.933056 GCTGGAGTTGTAGCTTCTGTCC 60.933 54.545 0.00 0.00 36.99 4.02
3687 5780 1.609580 GGGTTGTTGGAGCGTGTATCA 60.610 52.381 0.00 0.00 0.00 2.15
3839 6828 6.728632 AGTTTATTAAGGGCCCATTTTCTCAA 59.271 34.615 27.56 1.57 0.00 3.02
3898 7057 2.127383 GTGCGTGCGTGTTAAGGC 60.127 61.111 0.00 0.00 37.70 4.35
4033 8485 2.429930 TGGGTGCACCAGTACAGC 59.570 61.111 35.78 17.77 46.80 4.40
4134 8587 1.482593 AGGTCTTTGCCCGAGTAGATG 59.517 52.381 0.00 0.00 0.00 2.90
4154 8690 5.474876 AGATGGAGGTCAAAGCTAGTTTTTG 59.525 40.000 1.27 8.38 36.98 2.44
4167 8703 6.170506 AGCTAGTTTTTGATAATCACCACGA 58.829 36.000 0.00 0.00 0.00 4.35
4203 8742 4.436852 CGAGGCGTATGTTGCAAGTAAAAT 60.437 41.667 0.00 0.00 0.00 1.82
4219 8774 5.765176 AGTAAAATTTAAGACACCCGCAAC 58.235 37.500 0.00 0.00 0.00 4.17
4247 8821 1.405821 GGCTACTCGCTAGCTTTCTGA 59.594 52.381 13.93 0.84 46.53 3.27
4266 8846 1.004745 GATTGGTGTGTGGATGGAGGT 59.995 52.381 0.00 0.00 0.00 3.85
4267 8847 0.110295 TTGGTGTGTGGATGGAGGTG 59.890 55.000 0.00 0.00 0.00 4.00
4472 9360 1.296715 CCAGTGAGTAGTGGTGGCC 59.703 63.158 0.00 0.00 41.64 5.36
4474 9362 1.557099 CAGTGAGTAGTGGTGGCCTA 58.443 55.000 3.32 0.00 0.00 3.93
4475 9363 1.478510 CAGTGAGTAGTGGTGGCCTAG 59.521 57.143 3.32 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.536365 CACGACTAGGCGCAAAGATTA 58.464 47.619 20.33 0.00 33.86 1.75
66 67 0.454196 AAAACCAGTGTTCGTGCCAC 59.546 50.000 0.00 0.00 32.15 5.01
67 68 0.453793 CAAAACCAGTGTTCGTGCCA 59.546 50.000 0.00 0.00 32.15 4.92
68 69 0.454196 ACAAAACCAGTGTTCGTGCC 59.546 50.000 0.00 0.00 32.15 5.01
69 70 2.271821 AACAAAACCAGTGTTCGTGC 57.728 45.000 0.00 0.00 34.02 5.34
70 71 3.827625 TCAAACAAAACCAGTGTTCGTG 58.172 40.909 0.00 0.00 38.24 4.35
71 72 4.439563 GGATCAAACAAAACCAGTGTTCGT 60.440 41.667 0.00 0.00 38.24 3.85
72 73 4.041723 GGATCAAACAAAACCAGTGTTCG 58.958 43.478 0.00 0.00 38.24 3.95
73 74 5.262588 AGGATCAAACAAAACCAGTGTTC 57.737 39.130 0.00 0.00 38.24 3.18
74 75 4.099419 GGAGGATCAAACAAAACCAGTGTT 59.901 41.667 0.00 0.00 40.92 3.32
75 76 3.636764 GGAGGATCAAACAAAACCAGTGT 59.363 43.478 0.00 0.00 36.25 3.55
76 77 3.636300 TGGAGGATCAAACAAAACCAGTG 59.364 43.478 0.00 0.00 36.25 3.66
77 78 3.909732 TGGAGGATCAAACAAAACCAGT 58.090 40.909 0.00 0.00 36.25 4.00
89 90 0.620556 GAACAGGGCTTGGAGGATCA 59.379 55.000 0.44 0.00 36.25 2.92
93 94 1.251251 CTTTGAACAGGGCTTGGAGG 58.749 55.000 0.44 0.00 0.00 4.30
103 104 3.710209 AGATCCTGGACCTTTGAACAG 57.290 47.619 0.00 0.00 0.00 3.16
116 117 1.134670 GGTGACGAGGGAAAGATCCTG 60.135 57.143 0.00 0.00 45.77 3.86
139 140 8.026607 CCGGAGATTGCTGTTTTCTTATAAAAA 58.973 33.333 0.00 0.00 0.00 1.94
140 141 7.535139 CCGGAGATTGCTGTTTTCTTATAAAA 58.465 34.615 0.00 0.00 0.00 1.52
141 142 6.404293 GCCGGAGATTGCTGTTTTCTTATAAA 60.404 38.462 5.05 0.00 0.00 1.40
142 143 5.065988 GCCGGAGATTGCTGTTTTCTTATAA 59.934 40.000 5.05 0.00 0.00 0.98
143 144 4.574828 GCCGGAGATTGCTGTTTTCTTATA 59.425 41.667 5.05 0.00 0.00 0.98
144 145 3.378427 GCCGGAGATTGCTGTTTTCTTAT 59.622 43.478 5.05 0.00 0.00 1.73
145 146 2.747446 GCCGGAGATTGCTGTTTTCTTA 59.253 45.455 5.05 0.00 0.00 2.10
146 147 1.541588 GCCGGAGATTGCTGTTTTCTT 59.458 47.619 5.05 0.00 0.00 2.52
147 148 1.168714 GCCGGAGATTGCTGTTTTCT 58.831 50.000 5.05 0.00 0.00 2.52
148 149 0.881118 TGCCGGAGATTGCTGTTTTC 59.119 50.000 5.05 0.00 0.00 2.29
158 159 2.677542 TCTATGGTACTGCCGGAGAT 57.322 50.000 5.05 0.00 41.21 2.75
159 160 2.628178 CAATCTATGGTACTGCCGGAGA 59.372 50.000 5.05 0.00 41.21 3.71
160 161 2.289072 CCAATCTATGGTACTGCCGGAG 60.289 54.545 5.05 1.84 44.85 4.63
177 178 2.832643 TGTGGCCAGAATCATCCAAT 57.167 45.000 5.11 0.00 0.00 3.16
263 264 0.977395 ATCATTACTCCCGGCCTAGC 59.023 55.000 0.00 0.00 0.00 3.42
264 265 2.028020 GGAATCATTACTCCCGGCCTAG 60.028 54.545 0.00 0.00 0.00 3.02
265 266 1.975680 GGAATCATTACTCCCGGCCTA 59.024 52.381 0.00 0.00 0.00 3.93
270 271 2.606308 CGTACCGGAATCATTACTCCCG 60.606 54.545 9.46 0.00 39.85 5.14
305 306 1.001020 TAGGCACCCACCATGCTTG 60.001 57.895 0.00 0.00 42.93 4.01
345 346 1.228033 CATCATCCATGCCAGCCGA 60.228 57.895 0.00 0.00 0.00 5.54
346 347 2.265904 CCATCATCCATGCCAGCCG 61.266 63.158 0.00 0.00 0.00 5.52
347 348 1.906824 CCCATCATCCATGCCAGCC 60.907 63.158 0.00 0.00 0.00 4.85
348 349 0.251653 ATCCCATCATCCATGCCAGC 60.252 55.000 0.00 0.00 0.00 4.85
349 350 1.074889 TCATCCCATCATCCATGCCAG 59.925 52.381 0.00 0.00 0.00 4.85
350 351 1.074889 CTCATCCCATCATCCATGCCA 59.925 52.381 0.00 0.00 0.00 4.92
351 352 1.353358 TCTCATCCCATCATCCATGCC 59.647 52.381 0.00 0.00 0.00 4.40
352 353 2.434428 GTCTCATCCCATCATCCATGC 58.566 52.381 0.00 0.00 0.00 4.06
353 354 2.696506 CGTCTCATCCCATCATCCATG 58.303 52.381 0.00 0.00 0.00 3.66
354 355 1.002888 GCGTCTCATCCCATCATCCAT 59.997 52.381 0.00 0.00 0.00 3.41
355 356 0.394192 GCGTCTCATCCCATCATCCA 59.606 55.000 0.00 0.00 0.00 3.41
356 357 0.668706 CGCGTCTCATCCCATCATCC 60.669 60.000 0.00 0.00 0.00 3.51
357 358 0.315251 TCGCGTCTCATCCCATCATC 59.685 55.000 5.77 0.00 0.00 2.92
358 359 0.972134 ATCGCGTCTCATCCCATCAT 59.028 50.000 5.77 0.00 0.00 2.45
359 360 0.032540 CATCGCGTCTCATCCCATCA 59.967 55.000 5.77 0.00 0.00 3.07
360 361 1.287730 GCATCGCGTCTCATCCCATC 61.288 60.000 5.77 0.00 0.00 3.51
361 362 1.301244 GCATCGCGTCTCATCCCAT 60.301 57.895 5.77 0.00 0.00 4.00
362 363 2.106938 GCATCGCGTCTCATCCCA 59.893 61.111 5.77 0.00 0.00 4.37
404 405 4.357279 AAGCTGAGCTGGTGCCCC 62.357 66.667 8.16 0.00 39.62 5.80
405 406 2.749441 GAAGCTGAGCTGGTGCCC 60.749 66.667 8.16 0.00 39.62 5.36
406 407 2.749441 GGAAGCTGAGCTGGTGCC 60.749 66.667 8.16 3.81 39.62 5.01
407 408 1.744741 GAGGAAGCTGAGCTGGTGC 60.745 63.158 8.16 0.00 39.62 5.01
408 409 1.447489 CGAGGAAGCTGAGCTGGTG 60.447 63.158 8.16 0.00 39.62 4.17
409 410 1.910772 ACGAGGAAGCTGAGCTGGT 60.911 57.895 8.16 0.00 39.62 4.00
410 411 1.447489 CACGAGGAAGCTGAGCTGG 60.447 63.158 8.16 0.00 39.62 4.85
411 412 1.447489 CCACGAGGAAGCTGAGCTG 60.447 63.158 8.16 0.00 39.62 4.24
412 413 2.977178 CCACGAGGAAGCTGAGCT 59.023 61.111 0.00 0.00 42.56 4.09
413 414 2.817396 GCCACGAGGAAGCTGAGC 60.817 66.667 1.86 0.00 36.89 4.26
414 415 2.125350 GGCCACGAGGAAGCTGAG 60.125 66.667 1.86 0.00 36.89 3.35
415 416 4.069232 CGGCCACGAGGAAGCTGA 62.069 66.667 2.24 0.00 44.60 4.26
416 417 4.069232 TCGGCCACGAGGAAGCTG 62.069 66.667 2.24 0.00 45.59 4.24
426 427 1.717194 TCTTTAATCGTGTCGGCCAC 58.283 50.000 2.24 0.25 40.89 5.01
427 428 2.343101 CTTCTTTAATCGTGTCGGCCA 58.657 47.619 2.24 0.00 0.00 5.36
428 429 1.062148 GCTTCTTTAATCGTGTCGGCC 59.938 52.381 0.00 0.00 0.00 6.13
429 430 1.266891 CGCTTCTTTAATCGTGTCGGC 60.267 52.381 0.00 0.00 0.00 5.54
430 431 1.266891 GCGCTTCTTTAATCGTGTCGG 60.267 52.381 0.00 0.00 0.00 4.79
431 432 1.266891 GGCGCTTCTTTAATCGTGTCG 60.267 52.381 7.64 0.00 0.00 4.35
432 433 2.000447 AGGCGCTTCTTTAATCGTGTC 59.000 47.619 7.64 0.00 0.00 3.67
433 434 2.000447 GAGGCGCTTCTTTAATCGTGT 59.000 47.619 12.94 0.00 0.00 4.49
434 435 1.327764 GGAGGCGCTTCTTTAATCGTG 59.672 52.381 19.65 0.00 0.00 4.35
435 436 1.653151 GGAGGCGCTTCTTTAATCGT 58.347 50.000 19.65 0.00 0.00 3.73
436 437 0.938008 GGGAGGCGCTTCTTTAATCG 59.062 55.000 19.65 0.00 0.00 3.34
437 438 2.214347 GAGGGAGGCGCTTCTTTAATC 58.786 52.381 19.65 6.82 0.00 1.75
438 439 1.134068 GGAGGGAGGCGCTTCTTTAAT 60.134 52.381 19.65 1.04 0.00 1.40
439 440 0.252197 GGAGGGAGGCGCTTCTTTAA 59.748 55.000 19.65 0.00 0.00 1.52
440 441 1.623542 GGGAGGGAGGCGCTTCTTTA 61.624 60.000 19.65 0.00 0.00 1.85
441 442 2.671682 GGAGGGAGGCGCTTCTTT 59.328 61.111 19.65 7.73 0.00 2.52
442 443 3.403558 GGGAGGGAGGCGCTTCTT 61.404 66.667 19.65 8.10 0.00 2.52
469 470 1.892862 GATAGGCTGCTGCTGCTGG 60.893 63.158 26.79 12.95 40.48 4.85
470 471 0.881159 GAGATAGGCTGCTGCTGCTG 60.881 60.000 26.79 16.73 40.48 4.41
471 472 1.446791 GAGATAGGCTGCTGCTGCT 59.553 57.895 26.79 16.79 40.48 4.24
472 473 1.955157 CGAGATAGGCTGCTGCTGC 60.955 63.158 21.42 21.42 39.59 5.25
473 474 0.597118 GACGAGATAGGCTGCTGCTG 60.597 60.000 15.64 0.77 39.59 4.41
474 475 1.739049 GACGAGATAGGCTGCTGCT 59.261 57.895 15.64 4.34 39.59 4.24
475 476 1.300542 GGACGAGATAGGCTGCTGC 60.301 63.158 7.10 7.10 38.76 5.25
476 477 0.678395 ATGGACGAGATAGGCTGCTG 59.322 55.000 0.00 0.00 0.00 4.41
477 478 0.965439 GATGGACGAGATAGGCTGCT 59.035 55.000 0.00 0.00 0.00 4.24
478 479 0.387878 CGATGGACGAGATAGGCTGC 60.388 60.000 0.00 0.00 45.77 5.25
479 480 0.955178 ACGATGGACGAGATAGGCTG 59.045 55.000 0.00 0.00 45.77 4.85
480 481 1.202830 AGACGATGGACGAGATAGGCT 60.203 52.381 0.00 0.00 45.77 4.58
481 482 1.198178 GAGACGATGGACGAGATAGGC 59.802 57.143 0.00 0.00 45.77 3.93
482 483 1.461512 CGAGACGATGGACGAGATAGG 59.538 57.143 0.00 0.00 45.77 2.57
483 484 2.136728 ACGAGACGATGGACGAGATAG 58.863 52.381 0.00 0.00 45.77 2.08
484 485 2.133553 GACGAGACGATGGACGAGATA 58.866 52.381 0.00 0.00 45.77 1.98
485 486 0.938713 GACGAGACGATGGACGAGAT 59.061 55.000 0.00 0.00 45.77 2.75
486 487 0.108281 AGACGAGACGATGGACGAGA 60.108 55.000 0.00 0.00 45.77 4.04
487 488 0.302288 GAGACGAGACGATGGACGAG 59.698 60.000 0.00 0.00 45.77 4.18
488 489 0.108281 AGAGACGAGACGATGGACGA 60.108 55.000 0.00 0.00 45.77 4.20
489 490 3.283181 CGAGAGACGAGACGATGGACG 62.283 61.905 0.00 0.00 45.77 4.79
490 491 0.302288 CGAGAGACGAGACGATGGAC 59.698 60.000 0.00 0.00 45.77 4.02
491 492 1.429927 GCGAGAGACGAGACGATGGA 61.430 60.000 0.00 0.00 45.77 3.41
492 493 1.010574 GCGAGAGACGAGACGATGG 60.011 63.158 0.00 0.00 45.77 3.51
493 494 1.010574 GGCGAGAGACGAGACGATG 60.011 63.158 0.00 0.00 45.77 3.84
494 495 3.412061 GGCGAGAGACGAGACGAT 58.588 61.111 0.00 0.00 45.77 3.73
516 517 3.853330 CTTGACATCGCGGCGGTG 61.853 66.667 31.85 31.85 44.22 4.94
517 518 4.373116 ACTTGACATCGCGGCGGT 62.373 61.111 23.46 13.74 0.00 5.68
518 519 3.554692 GACTTGACATCGCGGCGG 61.555 66.667 23.46 9.93 0.00 6.13
519 520 3.554692 GGACTTGACATCGCGGCG 61.555 66.667 17.70 17.70 0.00 6.46
520 521 3.195698 GGGACTTGACATCGCGGC 61.196 66.667 6.13 0.00 0.00 6.53
521 522 2.885644 CGGGACTTGACATCGCGG 60.886 66.667 6.13 0.00 45.66 6.46
523 524 1.078759 CAGACGGGACTTGACATCGC 61.079 60.000 0.00 0.00 0.00 4.58
524 525 1.078759 GCAGACGGGACTTGACATCG 61.079 60.000 0.00 0.00 0.00 3.84
525 526 1.078759 CGCAGACGGGACTTGACATC 61.079 60.000 0.00 0.00 34.97 3.06
526 527 1.079819 CGCAGACGGGACTTGACAT 60.080 57.895 0.00 0.00 34.97 3.06
527 528 2.338620 CGCAGACGGGACTTGACA 59.661 61.111 0.00 0.00 34.97 3.58
545 546 2.544685 CAGTCGGAATCTGGACATGTC 58.455 52.381 17.91 17.91 35.63 3.06
546 547 2.680312 CAGTCGGAATCTGGACATGT 57.320 50.000 0.00 0.00 35.63 3.21
585 586 2.897350 CCCTCGATCGCTTTGGGC 60.897 66.667 11.09 0.00 37.64 5.36
586 587 2.044806 ATCCCCTCGATCGCTTTGGG 62.045 60.000 20.64 20.64 37.68 4.12
587 588 0.882042 CATCCCCTCGATCGCTTTGG 60.882 60.000 11.09 9.50 0.00 3.28
588 589 0.882042 CCATCCCCTCGATCGCTTTG 60.882 60.000 11.09 0.00 0.00 2.77
589 590 1.048724 TCCATCCCCTCGATCGCTTT 61.049 55.000 11.09 0.00 0.00 3.51
590 591 0.833834 ATCCATCCCCTCGATCGCTT 60.834 55.000 11.09 0.00 0.00 4.68
591 592 1.229019 ATCCATCCCCTCGATCGCT 60.229 57.895 11.09 0.00 0.00 4.93
592 593 1.216710 GATCCATCCCCTCGATCGC 59.783 63.158 11.09 0.00 0.00 4.58
593 594 0.529833 CTGATCCATCCCCTCGATCG 59.470 60.000 9.36 9.36 36.08 3.69
594 595 0.901124 CCTGATCCATCCCCTCGATC 59.099 60.000 0.00 0.00 34.29 3.69
595 596 0.489117 TCCTGATCCATCCCCTCGAT 59.511 55.000 0.00 0.00 0.00 3.59
596 597 0.264657 TTCCTGATCCATCCCCTCGA 59.735 55.000 0.00 0.00 0.00 4.04
597 598 1.356124 ATTCCTGATCCATCCCCTCG 58.644 55.000 0.00 0.00 0.00 4.63
598 599 2.573915 GGTATTCCTGATCCATCCCCTC 59.426 54.545 0.00 0.00 0.00 4.30
599 600 2.637165 GGTATTCCTGATCCATCCCCT 58.363 52.381 0.00 0.00 0.00 4.79
600 601 1.279271 CGGTATTCCTGATCCATCCCC 59.721 57.143 0.00 0.00 0.00 4.81
601 602 2.257207 TCGGTATTCCTGATCCATCCC 58.743 52.381 0.00 0.00 0.00 3.85
602 603 4.020218 TGATTCGGTATTCCTGATCCATCC 60.020 45.833 0.00 0.00 0.00 3.51
603 604 4.932200 GTGATTCGGTATTCCTGATCCATC 59.068 45.833 0.00 0.00 0.00 3.51
604 605 4.347876 TGTGATTCGGTATTCCTGATCCAT 59.652 41.667 0.00 0.00 0.00 3.41
605 606 3.709141 TGTGATTCGGTATTCCTGATCCA 59.291 43.478 0.00 0.00 0.00 3.41
606 607 4.336889 TGTGATTCGGTATTCCTGATCC 57.663 45.455 0.00 0.00 0.00 3.36
607 608 5.235186 CAGTTGTGATTCGGTATTCCTGATC 59.765 44.000 0.00 0.00 0.00 2.92
608 609 5.118990 CAGTTGTGATTCGGTATTCCTGAT 58.881 41.667 0.00 0.00 0.00 2.90
609 610 4.503910 CAGTTGTGATTCGGTATTCCTGA 58.496 43.478 0.00 0.00 0.00 3.86
610 611 3.623060 CCAGTTGTGATTCGGTATTCCTG 59.377 47.826 0.00 0.00 0.00 3.86
611 612 3.517901 TCCAGTTGTGATTCGGTATTCCT 59.482 43.478 0.00 0.00 0.00 3.36
612 613 3.869065 TCCAGTTGTGATTCGGTATTCC 58.131 45.455 0.00 0.00 0.00 3.01
613 614 5.220854 CCAATCCAGTTGTGATTCGGTATTC 60.221 44.000 0.00 0.00 36.01 1.75
614 615 4.640201 CCAATCCAGTTGTGATTCGGTATT 59.360 41.667 0.00 0.00 36.01 1.89
615 616 4.199310 CCAATCCAGTTGTGATTCGGTAT 58.801 43.478 0.00 0.00 36.01 2.73
616 617 3.008594 ACCAATCCAGTTGTGATTCGGTA 59.991 43.478 0.00 0.00 34.64 4.02
617 618 2.224769 ACCAATCCAGTTGTGATTCGGT 60.225 45.455 0.00 0.00 36.01 4.69
618 619 2.436417 ACCAATCCAGTTGTGATTCGG 58.564 47.619 0.00 0.00 36.01 4.30
619 620 5.390613 GTTAACCAATCCAGTTGTGATTCG 58.609 41.667 0.00 0.00 36.01 3.34
620 621 5.476945 AGGTTAACCAATCCAGTTGTGATTC 59.523 40.000 26.26 0.00 38.89 2.52
621 622 5.393866 AGGTTAACCAATCCAGTTGTGATT 58.606 37.500 26.26 0.00 38.89 2.57
622 623 4.998051 AGGTTAACCAATCCAGTTGTGAT 58.002 39.130 26.26 0.00 38.89 3.06
623 624 4.447138 AGGTTAACCAATCCAGTTGTGA 57.553 40.909 26.26 0.00 38.89 3.58
624 625 5.529581 AAAGGTTAACCAATCCAGTTGTG 57.470 39.130 26.26 0.00 38.89 3.33
625 626 5.659079 TGAAAAGGTTAACCAATCCAGTTGT 59.341 36.000 26.26 5.20 38.89 3.32
626 627 6.155475 TGAAAAGGTTAACCAATCCAGTTG 57.845 37.500 26.26 0.00 38.89 3.16
627 628 6.741240 GCATGAAAAGGTTAACCAATCCAGTT 60.741 38.462 26.26 7.29 38.89 3.16
628 629 5.279456 GCATGAAAAGGTTAACCAATCCAGT 60.279 40.000 26.26 0.59 38.89 4.00
629 630 5.170748 GCATGAAAAGGTTAACCAATCCAG 58.829 41.667 26.26 14.97 38.89 3.86
630 631 4.020662 GGCATGAAAAGGTTAACCAATCCA 60.021 41.667 26.26 17.45 38.89 3.41
631 632 4.020662 TGGCATGAAAAGGTTAACCAATCC 60.021 41.667 26.26 14.35 38.89 3.01
632 633 5.146010 TGGCATGAAAAGGTTAACCAATC 57.854 39.130 26.26 19.33 38.89 2.67
633 634 5.559148 TTGGCATGAAAAGGTTAACCAAT 57.441 34.783 26.26 12.03 38.89 3.16
634 635 5.359194 TTTGGCATGAAAAGGTTAACCAA 57.641 34.783 26.26 5.15 38.89 3.67
635 636 5.070981 TCATTTGGCATGAAAAGGTTAACCA 59.929 36.000 26.26 5.71 38.89 3.67
636 637 5.408299 GTCATTTGGCATGAAAAGGTTAACC 59.592 40.000 17.41 17.41 0.00 2.85
637 638 5.988561 TGTCATTTGGCATGAAAAGGTTAAC 59.011 36.000 0.00 0.00 0.00 2.01
638 639 6.166984 TGTCATTTGGCATGAAAAGGTTAA 57.833 33.333 0.00 0.00 0.00 2.01
639 640 5.798125 TGTCATTTGGCATGAAAAGGTTA 57.202 34.783 0.00 0.00 0.00 2.85
640 641 4.686191 TGTCATTTGGCATGAAAAGGTT 57.314 36.364 0.00 0.00 0.00 3.50
641 642 4.895668 ATGTCATTTGGCATGAAAAGGT 57.104 36.364 0.00 0.00 39.19 3.50
642 643 5.484715 AGAATGTCATTTGGCATGAAAAGG 58.515 37.500 0.00 0.00 39.84 3.11
643 644 6.619874 GCAAGAATGTCATTTGGCATGAAAAG 60.620 38.462 0.00 0.00 39.84 2.27
644 645 5.179742 GCAAGAATGTCATTTGGCATGAAAA 59.820 36.000 0.00 0.00 39.84 2.29
645 646 4.691685 GCAAGAATGTCATTTGGCATGAAA 59.308 37.500 0.00 0.00 39.84 2.69
646 647 4.247258 GCAAGAATGTCATTTGGCATGAA 58.753 39.130 0.00 0.00 39.84 2.57
647 648 3.368635 GGCAAGAATGTCATTTGGCATGA 60.369 43.478 15.40 0.00 39.84 3.07
648 649 2.933906 GGCAAGAATGTCATTTGGCATG 59.066 45.455 15.40 0.00 39.84 4.06
649 650 2.093341 GGGCAAGAATGTCATTTGGCAT 60.093 45.455 19.69 0.00 45.82 4.40
650 651 1.275856 GGGCAAGAATGTCATTTGGCA 59.724 47.619 19.69 0.00 45.82 4.92
651 652 1.405933 GGGGCAAGAATGTCATTTGGC 60.406 52.381 13.00 13.00 44.01 4.52
652 653 2.167075 GAGGGGCAAGAATGTCATTTGG 59.833 50.000 0.00 0.00 30.82 3.28
653 654 2.159338 CGAGGGGCAAGAATGTCATTTG 60.159 50.000 0.00 0.00 30.82 2.32
654 655 2.094675 CGAGGGGCAAGAATGTCATTT 58.905 47.619 0.00 0.00 30.82 2.32
655 656 1.004745 ACGAGGGGCAAGAATGTCATT 59.995 47.619 0.00 0.00 30.82 2.57
656 657 0.620556 ACGAGGGGCAAGAATGTCAT 59.379 50.000 0.00 0.00 30.82 3.06
657 658 0.036388 GACGAGGGGCAAGAATGTCA 60.036 55.000 0.00 0.00 30.82 3.58
658 659 0.250513 AGACGAGGGGCAAGAATGTC 59.749 55.000 0.00 0.00 0.00 3.06
659 660 0.693049 AAGACGAGGGGCAAGAATGT 59.307 50.000 0.00 0.00 0.00 2.71
660 661 1.826385 AAAGACGAGGGGCAAGAATG 58.174 50.000 0.00 0.00 0.00 2.67
661 662 3.933861 ATAAAGACGAGGGGCAAGAAT 57.066 42.857 0.00 0.00 0.00 2.40
662 663 3.713826 AATAAAGACGAGGGGCAAGAA 57.286 42.857 0.00 0.00 0.00 2.52
663 664 4.444306 CCATAATAAAGACGAGGGGCAAGA 60.444 45.833 0.00 0.00 0.00 3.02
664 665 3.815401 CCATAATAAAGACGAGGGGCAAG 59.185 47.826 0.00 0.00 0.00 4.01
665 666 3.456644 TCCATAATAAAGACGAGGGGCAA 59.543 43.478 0.00 0.00 0.00 4.52
666 667 3.042682 TCCATAATAAAGACGAGGGGCA 58.957 45.455 0.00 0.00 0.00 5.36
667 668 3.071167 ACTCCATAATAAAGACGAGGGGC 59.929 47.826 0.00 0.00 0.00 5.80
668 669 4.957684 ACTCCATAATAAAGACGAGGGG 57.042 45.455 0.00 0.00 0.00 4.79
669 670 5.914033 TCAACTCCATAATAAAGACGAGGG 58.086 41.667 0.00 0.00 0.00 4.30
670 671 7.843490 TTTCAACTCCATAATAAAGACGAGG 57.157 36.000 0.00 0.00 0.00 4.63
697 698 9.155975 CCTTTTTCGATCGGATGATATATCTTT 57.844 33.333 16.41 1.73 34.09 2.52
698 699 7.766278 CCCTTTTTCGATCGGATGATATATCTT 59.234 37.037 16.41 7.52 34.09 2.40
699 700 7.124298 TCCCTTTTTCGATCGGATGATATATCT 59.876 37.037 16.41 0.00 34.09 1.98
700 701 7.265673 TCCCTTTTTCGATCGGATGATATATC 58.734 38.462 16.41 5.73 34.09 1.63
701 702 7.182817 TCCCTTTTTCGATCGGATGATATAT 57.817 36.000 16.41 0.00 34.09 0.86
702 703 6.599356 TCCCTTTTTCGATCGGATGATATA 57.401 37.500 16.41 0.00 34.09 0.86
703 704 5.483685 TCCCTTTTTCGATCGGATGATAT 57.516 39.130 16.41 0.00 34.09 1.63
704 705 4.948341 TCCCTTTTTCGATCGGATGATA 57.052 40.909 16.41 0.00 34.09 2.15
705 706 3.838244 TCCCTTTTTCGATCGGATGAT 57.162 42.857 16.41 0.00 37.60 2.45
706 707 3.620427 TTCCCTTTTTCGATCGGATGA 57.380 42.857 16.41 0.00 0.00 2.92
707 708 4.552767 CGAATTCCCTTTTTCGATCGGATG 60.553 45.833 16.41 0.00 45.68 3.51
708 709 3.560068 CGAATTCCCTTTTTCGATCGGAT 59.440 43.478 16.41 0.00 45.68 4.18
709 710 2.933906 CGAATTCCCTTTTTCGATCGGA 59.066 45.455 16.41 2.60 45.68 4.55
710 711 2.031683 CCGAATTCCCTTTTTCGATCGG 59.968 50.000 16.41 2.76 45.68 4.18
711 712 2.031683 CCCGAATTCCCTTTTTCGATCG 59.968 50.000 9.36 9.36 45.68 3.69
712 713 2.223502 GCCCGAATTCCCTTTTTCGATC 60.224 50.000 6.63 0.00 45.68 3.69
713 714 1.749063 GCCCGAATTCCCTTTTTCGAT 59.251 47.619 6.63 0.00 45.68 3.59
714 715 1.170442 GCCCGAATTCCCTTTTTCGA 58.830 50.000 6.63 0.00 45.68 3.71
715 716 1.135402 CAGCCCGAATTCCCTTTTTCG 60.135 52.381 0.00 0.00 43.21 3.46
716 717 1.404181 GCAGCCCGAATTCCCTTTTTC 60.404 52.381 0.00 0.00 0.00 2.29
717 718 0.608130 GCAGCCCGAATTCCCTTTTT 59.392 50.000 0.00 0.00 0.00 1.94
718 719 1.595093 CGCAGCCCGAATTCCCTTTT 61.595 55.000 0.00 0.00 40.02 2.27
719 720 2.046285 CGCAGCCCGAATTCCCTTT 61.046 57.895 0.00 0.00 40.02 3.11
720 721 2.438434 CGCAGCCCGAATTCCCTT 60.438 61.111 0.00 0.00 40.02 3.95
721 722 3.682292 GACGCAGCCCGAATTCCCT 62.682 63.158 0.00 0.00 41.02 4.20
722 723 3.202706 GACGCAGCCCGAATTCCC 61.203 66.667 0.00 0.00 41.02 3.97
723 724 3.564027 CGACGCAGCCCGAATTCC 61.564 66.667 0.00 0.00 41.02 3.01
724 725 2.388232 AACGACGCAGCCCGAATTC 61.388 57.895 8.64 0.00 41.02 2.17
725 726 2.358247 AACGACGCAGCCCGAATT 60.358 55.556 8.64 0.00 41.02 2.17
726 727 3.118454 CAACGACGCAGCCCGAAT 61.118 61.111 8.64 0.00 41.02 3.34
730 731 3.723348 GAACCAACGACGCAGCCC 61.723 66.667 0.00 0.00 0.00 5.19
731 732 2.954753 CTGAACCAACGACGCAGCC 61.955 63.158 0.00 0.00 0.00 4.85
732 733 2.551270 CTGAACCAACGACGCAGC 59.449 61.111 0.00 0.00 0.00 5.25
733 734 2.954753 GCCTGAACCAACGACGCAG 61.955 63.158 0.00 0.00 0.00 5.18
734 735 2.970324 GCCTGAACCAACGACGCA 60.970 61.111 0.00 0.00 0.00 5.24
735 736 4.072088 CGCCTGAACCAACGACGC 62.072 66.667 0.00 0.00 0.00 5.19
736 737 1.768112 AAACGCCTGAACCAACGACG 61.768 55.000 0.00 0.00 0.00 5.12
737 738 0.316689 CAAACGCCTGAACCAACGAC 60.317 55.000 0.00 0.00 0.00 4.34
738 739 0.462225 TCAAACGCCTGAACCAACGA 60.462 50.000 0.00 0.00 0.00 3.85
739 740 0.041312 CTCAAACGCCTGAACCAACG 60.041 55.000 0.00 0.00 0.00 4.10
740 741 1.002792 GACTCAAACGCCTGAACCAAC 60.003 52.381 0.00 0.00 0.00 3.77
741 742 1.305201 GACTCAAACGCCTGAACCAA 58.695 50.000 0.00 0.00 0.00 3.67
742 743 0.878523 CGACTCAAACGCCTGAACCA 60.879 55.000 0.00 0.00 0.00 3.67
743 744 1.566018 CCGACTCAAACGCCTGAACC 61.566 60.000 0.00 0.00 0.00 3.62
744 745 1.566018 CCCGACTCAAACGCCTGAAC 61.566 60.000 0.00 0.00 0.00 3.18
745 746 1.301401 CCCGACTCAAACGCCTGAA 60.301 57.895 0.00 0.00 0.00 3.02
746 747 2.035237 AACCCGACTCAAACGCCTGA 62.035 55.000 0.00 0.00 0.00 3.86
747 748 1.164041 AAACCCGACTCAAACGCCTG 61.164 55.000 0.00 0.00 0.00 4.85
748 749 0.464916 AAAACCCGACTCAAACGCCT 60.465 50.000 0.00 0.00 0.00 5.52
749 750 0.382873 AAAAACCCGACTCAAACGCC 59.617 50.000 0.00 0.00 0.00 5.68
750 751 1.202211 ACAAAAACCCGACTCAAACGC 60.202 47.619 0.00 0.00 0.00 4.84
751 752 2.096174 TCACAAAAACCCGACTCAAACG 59.904 45.455 0.00 0.00 0.00 3.60
752 753 3.768468 TCACAAAAACCCGACTCAAAC 57.232 42.857 0.00 0.00 0.00 2.93
753 754 4.993029 AATCACAAAAACCCGACTCAAA 57.007 36.364 0.00 0.00 0.00 2.69
754 755 4.993029 AAATCACAAAAACCCGACTCAA 57.007 36.364 0.00 0.00 0.00 3.02
755 756 6.642707 AATAAATCACAAAAACCCGACTCA 57.357 33.333 0.00 0.00 0.00 3.41
756 757 6.921307 ACAAATAAATCACAAAAACCCGACTC 59.079 34.615 0.00 0.00 0.00 3.36
757 758 6.811954 ACAAATAAATCACAAAAACCCGACT 58.188 32.000 0.00 0.00 0.00 4.18
758 759 7.327518 CCTACAAATAAATCACAAAAACCCGAC 59.672 37.037 0.00 0.00 0.00 4.79
759 760 7.230913 TCCTACAAATAAATCACAAAAACCCGA 59.769 33.333 0.00 0.00 0.00 5.14
760 761 7.371936 TCCTACAAATAAATCACAAAAACCCG 58.628 34.615 0.00 0.00 0.00 5.28
761 762 9.549078 TTTCCTACAAATAAATCACAAAAACCC 57.451 29.630 0.00 0.00 0.00 4.11
775 776 8.620416 CGGAATTCATCATGTTTCCTACAAATA 58.380 33.333 7.93 0.00 40.89 1.40
776 777 7.339212 TCGGAATTCATCATGTTTCCTACAAAT 59.661 33.333 7.93 0.00 40.89 2.32
777 778 6.657117 TCGGAATTCATCATGTTTCCTACAAA 59.343 34.615 7.93 0.58 40.89 2.83
778 779 6.176896 TCGGAATTCATCATGTTTCCTACAA 58.823 36.000 7.93 2.27 40.89 2.41
779 780 5.739959 TCGGAATTCATCATGTTTCCTACA 58.260 37.500 7.93 0.00 41.97 2.74
780 781 6.662616 CATCGGAATTCATCATGTTTCCTAC 58.337 40.000 7.93 0.00 36.34 3.18
781 782 5.239306 GCATCGGAATTCATCATGTTTCCTA 59.761 40.000 7.93 8.72 36.34 2.94
782 783 4.037208 GCATCGGAATTCATCATGTTTCCT 59.963 41.667 7.93 1.44 36.34 3.36
783 784 4.037208 AGCATCGGAATTCATCATGTTTCC 59.963 41.667 7.93 10.45 35.36 3.13
784 785 5.179045 AGCATCGGAATTCATCATGTTTC 57.821 39.130 7.93 0.00 0.00 2.78
785 786 5.585390 GAAGCATCGGAATTCATCATGTTT 58.415 37.500 7.93 9.49 0.00 2.83
786 787 4.260907 CGAAGCATCGGAATTCATCATGTT 60.261 41.667 7.93 1.37 45.32 2.71
787 788 3.249320 CGAAGCATCGGAATTCATCATGT 59.751 43.478 7.93 0.00 45.32 3.21
788 789 3.806958 CGAAGCATCGGAATTCATCATG 58.193 45.455 7.93 6.92 45.32 3.07
808 809 2.278857 CATCCTTCTCGCCCGACG 60.279 66.667 0.00 0.00 45.62 5.12
809 810 0.806492 GTTCATCCTTCTCGCCCGAC 60.806 60.000 0.00 0.00 0.00 4.79
810 811 1.515954 GTTCATCCTTCTCGCCCGA 59.484 57.895 0.00 0.00 0.00 5.14
811 812 1.521681 GGTTCATCCTTCTCGCCCG 60.522 63.158 0.00 0.00 0.00 6.13
812 813 1.521681 CGGTTCATCCTTCTCGCCC 60.522 63.158 0.00 0.00 0.00 6.13
813 814 2.174319 GCGGTTCATCCTTCTCGCC 61.174 63.158 0.00 0.00 37.62 5.54
814 815 2.517450 CGCGGTTCATCCTTCTCGC 61.517 63.158 0.00 0.00 39.79 5.03
815 816 2.517450 GCGCGGTTCATCCTTCTCG 61.517 63.158 8.83 0.00 0.00 4.04
816 817 0.102481 TAGCGCGGTTCATCCTTCTC 59.898 55.000 19.09 0.00 0.00 2.87
817 818 0.179108 GTAGCGCGGTTCATCCTTCT 60.179 55.000 19.09 0.00 0.00 2.85
818 819 0.179108 AGTAGCGCGGTTCATCCTTC 60.179 55.000 19.09 0.00 0.00 3.46
819 820 0.179108 GAGTAGCGCGGTTCATCCTT 60.179 55.000 19.09 0.00 0.00 3.36
820 821 1.038130 AGAGTAGCGCGGTTCATCCT 61.038 55.000 19.09 7.39 0.00 3.24
821 822 0.666913 TAGAGTAGCGCGGTTCATCC 59.333 55.000 19.09 5.01 0.00 3.51
822 823 1.065102 TGTAGAGTAGCGCGGTTCATC 59.935 52.381 19.09 12.47 0.00 2.92
823 824 1.100510 TGTAGAGTAGCGCGGTTCAT 58.899 50.000 19.09 7.03 0.00 2.57
824 825 0.169672 GTGTAGAGTAGCGCGGTTCA 59.830 55.000 19.09 0.00 0.00 3.18
825 826 0.450983 AGTGTAGAGTAGCGCGGTTC 59.549 55.000 19.09 12.41 0.00 3.62
826 827 0.170561 CAGTGTAGAGTAGCGCGGTT 59.829 55.000 19.09 0.00 0.00 4.44
827 828 1.801332 CAGTGTAGAGTAGCGCGGT 59.199 57.895 17.70 17.70 0.00 5.68
828 829 1.586564 GCAGTGTAGAGTAGCGCGG 60.587 63.158 8.83 0.00 0.00 6.46
829 830 0.590230 GAGCAGTGTAGAGTAGCGCG 60.590 60.000 0.00 0.00 0.00 6.86
830 831 0.736053 AGAGCAGTGTAGAGTAGCGC 59.264 55.000 0.00 0.00 0.00 5.92
831 832 3.459145 TCTAGAGCAGTGTAGAGTAGCG 58.541 50.000 0.00 0.00 0.00 4.26
832 833 5.757886 CAATCTAGAGCAGTGTAGAGTAGC 58.242 45.833 0.00 0.00 32.32 3.58
833 834 5.278266 GGCAATCTAGAGCAGTGTAGAGTAG 60.278 48.000 6.34 0.00 32.32 2.57
834 835 4.580995 GGCAATCTAGAGCAGTGTAGAGTA 59.419 45.833 6.34 0.00 32.32 2.59
835 836 3.383185 GGCAATCTAGAGCAGTGTAGAGT 59.617 47.826 6.34 0.00 32.32 3.24
836 837 3.382865 TGGCAATCTAGAGCAGTGTAGAG 59.617 47.826 6.34 0.00 32.32 2.43
837 838 3.365472 TGGCAATCTAGAGCAGTGTAGA 58.635 45.455 6.34 0.00 33.29 2.59
838 839 3.808466 TGGCAATCTAGAGCAGTGTAG 57.192 47.619 6.34 0.00 0.00 2.74
839 840 3.181462 CCATGGCAATCTAGAGCAGTGTA 60.181 47.826 0.00 0.00 0.00 2.90
840 841 2.421107 CCATGGCAATCTAGAGCAGTGT 60.421 50.000 0.00 0.00 0.00 3.55
841 842 2.219458 CCATGGCAATCTAGAGCAGTG 58.781 52.381 0.00 4.26 0.00 3.66
842 843 1.476471 GCCATGGCAATCTAGAGCAGT 60.476 52.381 32.08 0.00 41.49 4.40
843 844 1.236628 GCCATGGCAATCTAGAGCAG 58.763 55.000 32.08 0.00 41.49 4.24
844 845 0.179009 GGCCATGGCAATCTAGAGCA 60.179 55.000 36.56 0.00 44.11 4.26
845 846 1.233285 CGGCCATGGCAATCTAGAGC 61.233 60.000 36.56 15.72 44.11 4.09
846 847 0.604780 CCGGCCATGGCAATCTAGAG 60.605 60.000 36.56 16.22 44.11 2.43
847 848 1.344953 ACCGGCCATGGCAATCTAGA 61.345 55.000 36.56 0.00 44.11 2.43
848 849 0.886490 GACCGGCCATGGCAATCTAG 60.886 60.000 36.56 19.70 44.11 2.43
849 850 1.148273 GACCGGCCATGGCAATCTA 59.852 57.895 36.56 0.00 44.11 1.98
850 851 2.124151 GACCGGCCATGGCAATCT 60.124 61.111 36.56 16.53 44.11 2.40
851 852 2.337879 TAGGACCGGCCATGGCAATC 62.338 60.000 36.56 27.53 44.11 2.67
852 853 2.343475 CTAGGACCGGCCATGGCAAT 62.343 60.000 36.56 21.74 44.11 3.56
853 854 3.012119 TAGGACCGGCCATGGCAA 61.012 61.111 36.56 10.73 44.11 4.52
854 855 3.479203 CTAGGACCGGCCATGGCA 61.479 66.667 36.56 14.64 44.11 4.92
855 856 2.056906 ATTCTAGGACCGGCCATGGC 62.057 60.000 29.47 29.47 40.02 4.40
856 857 0.035458 GATTCTAGGACCGGCCATGG 59.965 60.000 7.63 7.63 40.02 3.66
857 858 0.758734 TGATTCTAGGACCGGCCATG 59.241 55.000 15.92 8.66 40.02 3.66
858 859 1.417890 CTTGATTCTAGGACCGGCCAT 59.582 52.381 15.92 0.00 40.02 4.40
859 860 0.830648 CTTGATTCTAGGACCGGCCA 59.169 55.000 15.92 3.17 40.02 5.36
860 861 0.533085 GCTTGATTCTAGGACCGGCC 60.533 60.000 0.00 3.58 0.00 6.13
861 862 0.178068 TGCTTGATTCTAGGACCGGC 59.822 55.000 0.00 0.00 0.00 6.13
862 863 1.207089 TGTGCTTGATTCTAGGACCGG 59.793 52.381 14.93 0.00 33.54 5.28
863 864 2.672961 TGTGCTTGATTCTAGGACCG 57.327 50.000 14.93 0.00 33.54 4.79
864 865 4.775236 AGATTGTGCTTGATTCTAGGACC 58.225 43.478 14.93 2.90 33.54 4.46
865 866 6.810911 TCTAGATTGTGCTTGATTCTAGGAC 58.189 40.000 11.69 11.69 37.53 3.85
866 867 6.462207 GCTCTAGATTGTGCTTGATTCTAGGA 60.462 42.308 0.00 0.00 37.53 2.94
867 868 5.695816 GCTCTAGATTGTGCTTGATTCTAGG 59.304 44.000 0.00 0.00 37.53 3.02
868 869 6.279123 TGCTCTAGATTGTGCTTGATTCTAG 58.721 40.000 0.00 0.00 38.03 2.43
869 870 6.127225 ACTGCTCTAGATTGTGCTTGATTCTA 60.127 38.462 0.00 0.00 0.00 2.10
870 871 5.095145 TGCTCTAGATTGTGCTTGATTCT 57.905 39.130 0.00 0.00 0.00 2.40
871 872 4.874966 ACTGCTCTAGATTGTGCTTGATTC 59.125 41.667 0.00 0.00 0.00 2.52
872 873 4.634883 CACTGCTCTAGATTGTGCTTGATT 59.365 41.667 0.00 0.00 0.00 2.57
873 874 4.190001 CACTGCTCTAGATTGTGCTTGAT 58.810 43.478 0.00 0.00 0.00 2.57
874 875 3.007290 ACACTGCTCTAGATTGTGCTTGA 59.993 43.478 15.38 0.00 32.49 3.02
875 876 3.332919 ACACTGCTCTAGATTGTGCTTG 58.667 45.455 15.38 9.59 32.49 4.01
876 877 3.692257 ACACTGCTCTAGATTGTGCTT 57.308 42.857 15.38 0.90 32.49 3.91
877 878 4.019858 TCTACACTGCTCTAGATTGTGCT 58.980 43.478 15.38 8.69 32.49 4.40
878 879 4.358851 CTCTACACTGCTCTAGATTGTGC 58.641 47.826 15.38 7.15 32.49 4.57
879 880 4.142293 TGCTCTACACTGCTCTAGATTGTG 60.142 45.833 14.41 14.41 35.09 3.33
880 881 4.019858 TGCTCTACACTGCTCTAGATTGT 58.980 43.478 0.00 0.00 0.00 2.71
1057 1062 6.239402 CCCTTTTGAGTTCCAGTGAATTCATT 60.239 38.462 12.12 4.21 43.90 2.57
1067 1072 1.986882 AGCACCCTTTTGAGTTCCAG 58.013 50.000 0.00 0.00 0.00 3.86
1168 1173 8.250143 ACATTTTCCTCCACTAAGTTTTCATT 57.750 30.769 0.00 0.00 0.00 2.57
1291 1296 4.301072 TTTCCCAAGTTCTAGGGTCATG 57.699 45.455 0.00 0.00 45.64 3.07
1385 1390 9.878667 TTGAAAAATGTCTACCGTTATCATCTA 57.121 29.630 0.00 0.00 0.00 1.98
1431 1439 4.966805 TCACTAACCTCCCCATTACTTAGG 59.033 45.833 0.00 0.00 0.00 2.69
1702 3756 5.049405 GTCTCCATCGCTCTTTTTCTTTTGA 60.049 40.000 0.00 0.00 0.00 2.69
1785 3839 3.444703 AGTTTCTCATTCGATCCTCGG 57.555 47.619 0.00 0.00 40.88 4.63
1827 3881 9.783081 GCCATCATTTCTATTATTCCCAAAATT 57.217 29.630 0.00 0.00 0.00 1.82
1828 3882 8.936787 TGCCATCATTTCTATTATTCCCAAAAT 58.063 29.630 0.00 0.00 0.00 1.82
2115 4169 6.490040 CCACCTTCAAGAACTCCAGAAAATAA 59.510 38.462 0.00 0.00 0.00 1.40
2374 4433 5.623824 GCACAACTCCGAAGAAGGTAATAGA 60.624 44.000 0.00 0.00 0.00 1.98
3287 5364 7.928706 CAGGAACAGTTAAGAGGATTCGATAAT 59.071 37.037 0.00 0.00 0.00 1.28
3614 5692 6.564709 TGTTCTCAATTCTTGATCCAACAG 57.435 37.500 0.00 0.00 39.30 3.16
3640 5732 8.138712 ACAAGTCTTGTCTGAACTCTTAACTAG 58.861 37.037 12.62 0.00 40.56 2.57
3817 6642 7.417342 CGAATTGAGAAAATGGGCCCTTAATAA 60.417 37.037 25.70 0.07 0.00 1.40
3818 6643 6.040391 CGAATTGAGAAAATGGGCCCTTAATA 59.960 38.462 25.70 1.02 0.00 0.98
3819 6644 5.163416 CGAATTGAGAAAATGGGCCCTTAAT 60.163 40.000 25.70 9.26 0.00 1.40
3839 6828 1.377725 CAGAGGCCCTTGTGCGAAT 60.378 57.895 0.00 0.00 0.00 3.34
4033 8485 1.741145 CCCCGTAACGAAAAGGGAATG 59.259 52.381 12.70 0.00 46.64 2.67
4134 8587 5.966742 ATCAAAAACTAGCTTTGACCTCC 57.033 39.130 18.11 0.00 43.57 4.30
4154 8690 4.336889 TGGATCCTTCGTGGTGATTATC 57.663 45.455 14.23 0.00 37.07 1.75
4167 8703 1.153086 GCCTCGCACATGGATCCTT 60.153 57.895 14.23 3.29 0.00 3.36
4203 8742 1.868498 CTTCGTTGCGGGTGTCTTAAA 59.132 47.619 0.00 0.00 0.00 1.52
4219 8774 4.327885 GCGAGTAGCCATCCTTCG 57.672 61.111 0.00 0.00 40.81 3.79
4247 8821 1.075601 ACCTCCATCCACACACCAAT 58.924 50.000 0.00 0.00 0.00 3.16
4266 8846 1.808411 GGCACGGAAAAGTCATCTCA 58.192 50.000 0.00 0.00 0.00 3.27
4300 8991 2.597217 CCAAAGACAAGCCGGCCA 60.597 61.111 26.15 0.00 0.00 5.36
4470 9358 0.739813 AACGTCGCATCAACCTAGGC 60.740 55.000 9.30 0.00 0.00 3.93
4471 9359 1.278238 GAACGTCGCATCAACCTAGG 58.722 55.000 7.41 7.41 0.00 3.02
4472 9360 1.654105 GTGAACGTCGCATCAACCTAG 59.346 52.381 3.19 0.00 0.00 3.02
4474 9362 1.282248 CGTGAACGTCGCATCAACCT 61.282 55.000 3.19 0.00 34.11 3.50
4475 9363 1.129809 CGTGAACGTCGCATCAACC 59.870 57.895 3.19 0.00 34.11 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.