Multiple sequence alignment - TraesCS4A01G252600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G252600 chr4A 100.000 3505 0 0 1 3505 564957321 564953817 0.000000e+00 6473.0
1 TraesCS4A01G252600 chr4A 86.916 214 21 3 2346 2552 564954187 564953974 2.100000e-57 233.0
2 TraesCS4A01G252600 chr4A 86.916 214 21 3 3135 3348 564954976 564954770 2.100000e-57 233.0
3 TraesCS4A01G252600 chr4B 90.042 1185 66 24 632 1798 54365960 54364810 0.000000e+00 1487.0
4 TraesCS4A01G252600 chr4B 89.402 585 38 11 1986 2552 54364774 54364196 0.000000e+00 715.0
5 TraesCS4A01G252600 chr4B 82.378 471 61 10 2023 2473 54367762 54368230 1.180000e-104 390.0
6 TraesCS4A01G252600 chr4B 94.118 170 10 0 3135 3304 54364398 54364229 3.470000e-65 259.0
7 TraesCS4A01G252600 chr4B 89.500 200 15 6 3 198 54362585 54362782 7.510000e-62 248.0
8 TraesCS4A01G252600 chr4B 90.000 100 9 1 415 513 54363787 54363886 1.020000e-25 128.0
9 TraesCS4A01G252600 chr4B 82.090 134 17 4 1844 1971 147699303 147699435 1.330000e-19 108.0
10 TraesCS4A01G252600 chr4D 89.671 1094 64 21 733 1795 37265688 37266763 0.000000e+00 1349.0
11 TraesCS4A01G252600 chr4D 88.964 589 41 7 1981 2551 37266822 37267404 0.000000e+00 706.0
12 TraesCS4A01G252600 chr4D 83.519 449 59 8 2023 2456 37493219 37492771 4.210000e-109 405.0
13 TraesCS4A01G252600 chr4D 85.039 381 45 11 1387 1759 37493708 37493332 9.180000e-101 377.0
14 TraesCS4A01G252600 chr4D 93.407 182 12 0 3135 3316 37267199 37267380 1.600000e-68 270.0
15 TraesCS4A01G252600 chr4D 95.960 99 4 0 415 513 37265515 37265613 1.010000e-35 161.0
16 TraesCS4A01G252600 chr3B 77.984 645 70 35 2551 3129 768743901 768744539 4.330000e-89 339.0
17 TraesCS4A01G252600 chr2B 77.918 634 71 34 2552 3120 529258304 529258933 7.250000e-87 331.0
18 TraesCS4A01G252600 chr2B 86.014 143 15 5 1832 1971 505996332 505996472 7.840000e-32 148.0
19 TraesCS4A01G252600 chr2B 96.875 32 0 1 3354 3385 510054056 510054086 6.000000e-03 52.8
20 TraesCS4A01G252600 chr5D 77.054 645 72 36 2552 3129 412730741 412731376 5.690000e-78 302.0
21 TraesCS4A01G252600 chr5D 81.250 144 21 6 1832 1971 539861020 539860879 1.030000e-20 111.0
22 TraesCS4A01G252600 chr5D 80.272 147 21 7 1832 1971 445215513 445215658 1.720000e-18 104.0
23 TraesCS4A01G252600 chr5B 81.212 330 36 13 2553 2858 482309241 482308914 3.500000e-60 243.0
24 TraesCS4A01G252600 chr5B 82.353 238 34 4 2895 3129 482308837 482308605 2.130000e-47 200.0
25 TraesCS4A01G252600 chr5B 89.011 91 9 1 1894 1984 282045904 282045993 1.030000e-20 111.0
26 TraesCS4A01G252600 chr5B 100.000 32 0 0 3354 3385 396452408 396452377 3.780000e-05 60.2
27 TraesCS4A01G252600 chr5B 100.000 29 0 0 3354 3382 597257165 597257193 2.000000e-03 54.7
28 TraesCS4A01G252600 chr1B 81.818 297 26 15 2590 2858 57767026 57767322 1.270000e-54 224.0
29 TraesCS4A01G252600 chr1B 86.364 66 7 1 131 194 571692029 571692094 1.750000e-08 71.3
30 TraesCS4A01G252600 chr1B 93.617 47 1 2 2895 2939 57767399 57767445 6.280000e-08 69.4
31 TraesCS4A01G252600 chr7A 79.118 340 42 13 2552 2865 127998325 127997989 1.280000e-49 207.0
32 TraesCS4A01G252600 chr7A 82.237 152 24 3 1833 1981 42263041 42263192 1.020000e-25 128.0
33 TraesCS4A01G252600 chr7A 100.000 30 0 0 3352 3381 462442396 462442425 4.890000e-04 56.5
34 TraesCS4A01G252600 chr1D 84.277 159 17 8 1833 1984 330094162 330094319 7.840000e-32 148.0
35 TraesCS4A01G252600 chr1A 96.053 76 2 1 755 829 578906112 578906037 4.750000e-24 122.0
36 TraesCS4A01G252600 chr1A 92.754 69 4 1 128 195 462126520 462126588 8.010000e-17 99.0
37 TraesCS4A01G252600 chr2D 82.482 137 19 5 1836 1971 590937834 590937966 7.950000e-22 115.0
38 TraesCS4A01G252600 chr2D 84.286 70 7 4 128 195 562076419 562076486 8.120000e-07 65.8
39 TraesCS4A01G252600 chr3D 79.167 144 20 7 1833 1971 519177385 519177523 1.340000e-14 91.6
40 TraesCS4A01G252600 chr3D 90.196 51 4 1 3350 3399 585012003 585012053 8.120000e-07 65.8
41 TraesCS4A01G252600 chr7B 100.000 32 0 0 3354 3385 641384254 641384223 3.780000e-05 60.2
42 TraesCS4A01G252600 chr7B 100.000 32 0 0 3354 3385 741289204 741289235 3.780000e-05 60.2
43 TraesCS4A01G252600 chr5A 90.476 42 4 0 3341 3382 676322991 676322950 4.890000e-04 56.5
44 TraesCS4A01G252600 chr3A 100.000 29 0 0 3354 3382 458189104 458189076 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G252600 chr4A 564953817 564957321 3504 True 2313.000000 6473 91.277333 1 3505 3 chr4A.!!$R1 3504
1 TraesCS4A01G252600 chr4B 54364196 54365960 1764 True 820.333333 1487 91.187333 632 3304 3 chr4B.!!$R1 2672
2 TraesCS4A01G252600 chr4B 54362585 54368230 5645 False 255.333333 390 87.292667 3 2473 3 chr4B.!!$F2 2470
3 TraesCS4A01G252600 chr4D 37265515 37267404 1889 False 621.500000 1349 92.000500 415 3316 4 chr4D.!!$F1 2901
4 TraesCS4A01G252600 chr4D 37492771 37493708 937 True 391.000000 405 84.279000 1387 2456 2 chr4D.!!$R1 1069
5 TraesCS4A01G252600 chr3B 768743901 768744539 638 False 339.000000 339 77.984000 2551 3129 1 chr3B.!!$F1 578
6 TraesCS4A01G252600 chr2B 529258304 529258933 629 False 331.000000 331 77.918000 2552 3120 1 chr2B.!!$F3 568
7 TraesCS4A01G252600 chr5D 412730741 412731376 635 False 302.000000 302 77.054000 2552 3129 1 chr5D.!!$F1 577
8 TraesCS4A01G252600 chr5B 482308605 482309241 636 True 221.500000 243 81.782500 2553 3129 2 chr5B.!!$R2 576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
484 1367 0.108019 GAAACTTCCGGACCTGGTGT 59.892 55.0 1.83 0.0 0.00 4.16 F
1250 4552 0.037326 CTCCGGCTGCAACTACAGAA 60.037 55.0 0.50 0.0 40.25 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 5309 0.040058 TAAGACCTAGCCACACCGGA 59.960 55.0 9.46 0.0 36.56 5.14 R
3078 6695 0.396974 AGTTGGGCCTCAGTTGCAAA 60.397 50.0 4.53 0.0 0.00 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.281727 AGTCCACGAACATGCCAATAT 57.718 42.857 0.00 0.00 0.00 1.28
49 50 7.173218 CGAACATGCCAATATACCTACAAAGAT 59.827 37.037 0.00 0.00 0.00 2.40
53 54 7.956420 TGCCAATATACCTACAAAGATAACG 57.044 36.000 0.00 0.00 0.00 3.18
63 64 8.897872 ACCTACAAAGATAACGAAAGAAAAGA 57.102 30.769 0.00 0.00 0.00 2.52
131 133 4.648307 TGAACATGCCAATATACCATGCAA 59.352 37.500 0.00 0.00 39.86 4.08
132 134 5.304871 TGAACATGCCAATATACCATGCAAT 59.695 36.000 0.00 0.00 39.86 3.56
169 171 6.146216 CGAGTAGAGATCGAAAACTATGCAT 58.854 40.000 3.79 3.79 42.76 3.96
170 172 6.638873 CGAGTAGAGATCGAAAACTATGCATT 59.361 38.462 3.54 0.00 42.76 3.56
184 186 6.534475 ACTATGCATTGTGGACATGAAAAT 57.466 33.333 13.12 0.00 0.00 1.82
188 190 3.123959 GCATTGTGGACATGAAAATGTGC 59.876 43.478 0.00 3.68 42.25 4.57
198 200 7.123098 TGGACATGAAAATGTGCTAGATGAATT 59.877 33.333 0.00 0.00 42.37 2.17
199 201 7.646922 GGACATGAAAATGTGCTAGATGAATTC 59.353 37.037 0.00 0.00 39.39 2.17
200 202 7.486647 ACATGAAAATGTGCTAGATGAATTCC 58.513 34.615 0.00 0.00 32.79 3.01
201 203 6.455360 TGAAAATGTGCTAGATGAATTCCC 57.545 37.500 2.27 0.00 0.00 3.97
202 204 5.066375 TGAAAATGTGCTAGATGAATTCCCG 59.934 40.000 2.27 0.00 0.00 5.14
203 205 1.953559 TGTGCTAGATGAATTCCCGC 58.046 50.000 2.27 0.00 0.00 6.13
204 206 1.209261 TGTGCTAGATGAATTCCCGCA 59.791 47.619 2.27 1.92 0.00 5.69
205 207 2.288666 GTGCTAGATGAATTCCCGCAA 58.711 47.619 2.27 0.00 33.46 4.85
206 208 2.682856 GTGCTAGATGAATTCCCGCAAA 59.317 45.455 2.27 0.00 33.46 3.68
207 209 3.128589 GTGCTAGATGAATTCCCGCAAAA 59.871 43.478 2.27 0.00 33.46 2.44
208 210 3.761218 TGCTAGATGAATTCCCGCAAAAA 59.239 39.130 2.27 0.00 29.98 1.94
291 293 7.315066 TGTGCTGATATTTCTACATATCCCA 57.685 36.000 0.00 0.00 35.88 4.37
292 294 7.744733 TGTGCTGATATTTCTACATATCCCAA 58.255 34.615 0.00 0.00 35.88 4.12
317 1199 6.827641 TCATTTACTTTCGGAAATTCTGACG 58.172 36.000 3.64 1.74 30.17 4.35
319 1201 3.396260 ACTTTCGGAAATTCTGACGGA 57.604 42.857 3.64 0.00 30.17 4.69
324 1206 2.496070 TCGGAAATTCTGACGGATGACT 59.504 45.455 0.00 0.00 0.00 3.41
325 1207 3.056107 TCGGAAATTCTGACGGATGACTT 60.056 43.478 0.00 0.00 0.00 3.01
326 1208 3.684788 CGGAAATTCTGACGGATGACTTT 59.315 43.478 0.00 0.00 0.00 2.66
399 1281 6.564328 GGCAACTGATACATTTTCTTTAGGG 58.436 40.000 0.00 0.00 0.00 3.53
400 1282 6.377146 GGCAACTGATACATTTTCTTTAGGGA 59.623 38.462 0.00 0.00 0.00 4.20
401 1283 7.415653 GGCAACTGATACATTTTCTTTAGGGAG 60.416 40.741 0.00 0.00 0.00 4.30
402 1284 7.415653 GCAACTGATACATTTTCTTTAGGGAGG 60.416 40.741 0.00 0.00 0.00 4.30
403 1285 6.122964 ACTGATACATTTTCTTTAGGGAGGC 58.877 40.000 0.00 0.00 0.00 4.70
404 1286 6.073447 TGATACATTTTCTTTAGGGAGGCA 57.927 37.500 0.00 0.00 0.00 4.75
405 1287 6.489603 TGATACATTTTCTTTAGGGAGGCAA 58.510 36.000 0.00 0.00 0.00 4.52
406 1288 6.377146 TGATACATTTTCTTTAGGGAGGCAAC 59.623 38.462 0.00 0.00 0.00 4.17
484 1367 0.108019 GAAACTTCCGGACCTGGTGT 59.892 55.000 1.83 0.00 0.00 4.16
507 1390 3.836949 CACGTAAACTAGGCTTTCGGTA 58.163 45.455 0.00 0.00 0.00 4.02
509 1392 4.866486 CACGTAAACTAGGCTTTCGGTAAT 59.134 41.667 0.00 0.00 0.00 1.89
510 1393 5.349543 CACGTAAACTAGGCTTTCGGTAATT 59.650 40.000 0.00 0.00 0.00 1.40
511 1394 5.934043 ACGTAAACTAGGCTTTCGGTAATTT 59.066 36.000 0.00 0.00 0.00 1.82
512 1395 6.427853 ACGTAAACTAGGCTTTCGGTAATTTT 59.572 34.615 0.00 0.00 0.00 1.82
513 1396 7.041167 ACGTAAACTAGGCTTTCGGTAATTTTT 60.041 33.333 0.00 0.00 0.00 1.94
514 1397 7.269724 CGTAAACTAGGCTTTCGGTAATTTTTG 59.730 37.037 0.00 0.00 0.00 2.44
515 1398 6.644248 AACTAGGCTTTCGGTAATTTTTGT 57.356 33.333 0.00 0.00 0.00 2.83
516 1399 6.250344 ACTAGGCTTTCGGTAATTTTTGTC 57.750 37.500 0.00 0.00 0.00 3.18
517 1400 6.002082 ACTAGGCTTTCGGTAATTTTTGTCT 58.998 36.000 0.00 0.00 0.00 3.41
518 1401 7.163441 ACTAGGCTTTCGGTAATTTTTGTCTA 58.837 34.615 0.00 0.00 0.00 2.59
519 1402 6.887626 AGGCTTTCGGTAATTTTTGTCTAA 57.112 33.333 0.00 0.00 0.00 2.10
520 1403 7.279750 AGGCTTTCGGTAATTTTTGTCTAAA 57.720 32.000 0.00 0.00 0.00 1.85
521 1404 7.892609 AGGCTTTCGGTAATTTTTGTCTAAAT 58.107 30.769 0.00 0.00 0.00 1.40
522 1405 9.016438 AGGCTTTCGGTAATTTTTGTCTAAATA 57.984 29.630 0.00 0.00 0.00 1.40
523 1406 9.628746 GGCTTTCGGTAATTTTTGTCTAAATAA 57.371 29.630 0.00 0.00 0.00 1.40
535 1418 8.582433 TTTTGTCTAAATAAAAAGGCTTTCGG 57.418 30.769 13.76 0.00 0.00 4.30
536 1419 6.887626 TGTCTAAATAAAAAGGCTTTCGGT 57.112 33.333 13.76 4.58 0.00 4.69
537 1420 6.905578 TGTCTAAATAAAAAGGCTTTCGGTC 58.094 36.000 13.76 0.00 0.00 4.79
538 1421 6.487331 TGTCTAAATAAAAAGGCTTTCGGTCA 59.513 34.615 13.76 0.00 0.00 4.02
539 1422 7.175990 TGTCTAAATAAAAAGGCTTTCGGTCAT 59.824 33.333 13.76 1.56 0.00 3.06
551 1434 3.951775 TTCGGTCATTTTTCCCATTGG 57.048 42.857 0.00 0.00 0.00 3.16
611 1584 7.630242 TTTTTGCTGGAAGTATTGGATAGAG 57.370 36.000 0.00 0.00 35.30 2.43
612 1585 4.963318 TGCTGGAAGTATTGGATAGAGG 57.037 45.455 0.00 0.00 35.30 3.69
613 1586 4.298626 TGCTGGAAGTATTGGATAGAGGT 58.701 43.478 0.00 0.00 35.30 3.85
614 1587 4.721776 TGCTGGAAGTATTGGATAGAGGTT 59.278 41.667 0.00 0.00 35.30 3.50
615 1588 5.191722 TGCTGGAAGTATTGGATAGAGGTTT 59.808 40.000 0.00 0.00 35.30 3.27
617 1590 6.603599 GCTGGAAGTATTGGATAGAGGTTTTT 59.396 38.462 0.00 0.00 35.30 1.94
662 2259 3.010584 AGAGGTTGGTAAGCCACATGAAT 59.989 43.478 0.00 0.00 46.01 2.57
669 2266 3.509575 GGTAAGCCACATGAATTTCCACA 59.490 43.478 0.00 0.00 34.09 4.17
674 2271 4.101430 AGCCACATGAATTTCCACACTTTT 59.899 37.500 0.00 0.00 0.00 2.27
830 3413 0.944311 TGAGCGAAAACTCAGGCGTC 60.944 55.000 0.00 0.00 41.72 5.19
959 4114 2.130073 CTCCATGAGATACCGCGCGA 62.130 60.000 34.63 13.72 0.00 5.87
961 4116 2.016704 CATGAGATACCGCGCGACC 61.017 63.158 34.63 16.54 0.00 4.79
1239 4541 1.808133 GCAAGTAGAATCCTCCGGCTG 60.808 57.143 0.00 0.00 0.00 4.85
1247 4549 1.264749 ATCCTCCGGCTGCAACTACA 61.265 55.000 0.50 0.00 0.00 2.74
1248 4550 1.448540 CCTCCGGCTGCAACTACAG 60.449 63.158 0.50 0.00 40.80 2.74
1250 4552 0.037326 CTCCGGCTGCAACTACAGAA 60.037 55.000 0.50 0.00 40.25 3.02
1251 4553 0.320421 TCCGGCTGCAACTACAGAAC 60.320 55.000 0.50 0.00 40.25 3.01
1252 4554 0.320771 CCGGCTGCAACTACAGAACT 60.321 55.000 0.50 0.00 40.25 3.01
1253 4555 1.067142 CCGGCTGCAACTACAGAACTA 60.067 52.381 0.50 0.00 40.25 2.24
1254 4556 1.993370 CGGCTGCAACTACAGAACTAC 59.007 52.381 0.50 0.00 40.25 2.73
1260 4562 5.143376 TGCAACTACAGAACTACTTACCC 57.857 43.478 0.00 0.00 0.00 3.69
1261 4563 4.171754 GCAACTACAGAACTACTTACCCG 58.828 47.826 0.00 0.00 0.00 5.28
1262 4564 4.082571 GCAACTACAGAACTACTTACCCGA 60.083 45.833 0.00 0.00 0.00 5.14
1265 4567 4.574013 ACTACAGAACTACTTACCCGATCG 59.426 45.833 8.51 8.51 0.00 3.69
1270 4572 5.008811 CAGAACTACTTACCCGATCGATTCT 59.991 44.000 18.66 7.94 0.00 2.40
1282 4584 3.187227 CGATCGATTCTGGGCCTTTTATG 59.813 47.826 10.26 0.00 0.00 1.90
1315 4617 6.491062 CCAATTGATTGATATTAGTGGAGCCA 59.509 38.462 7.12 0.00 40.14 4.75
1323 4631 2.859165 TTAGTGGAGCCAACTTCAGG 57.141 50.000 0.00 0.00 29.56 3.86
1348 4786 3.068024 CAGCAAAGCTTGAAACCCTAACA 59.932 43.478 0.00 0.00 36.40 2.41
1350 4788 4.344968 AGCAAAGCTTGAAACCCTAACATT 59.655 37.500 0.00 0.00 33.89 2.71
1771 5224 0.643820 CACGGTAATTTCGTCGAGCC 59.356 55.000 0.00 0.00 38.94 4.70
1800 5281 6.480981 CCTCTGAAAAGGTCACGTAAACTTAA 59.519 38.462 0.00 0.00 31.13 1.85
1804 5285 7.346695 TGAAAAGGTCACGTAAACTTAATTCG 58.653 34.615 0.00 0.00 0.00 3.34
1805 5286 4.916099 AGGTCACGTAAACTTAATTCGC 57.084 40.909 0.00 0.00 0.00 4.70
1806 5287 4.309099 AGGTCACGTAAACTTAATTCGCA 58.691 39.130 0.00 0.00 0.00 5.10
1807 5288 4.151157 AGGTCACGTAAACTTAATTCGCAC 59.849 41.667 0.00 0.00 0.00 5.34
1808 5289 4.388790 GTCACGTAAACTTAATTCGCACC 58.611 43.478 0.00 0.00 0.00 5.01
1809 5290 3.432933 TCACGTAAACTTAATTCGCACCC 59.567 43.478 0.00 0.00 0.00 4.61
1810 5291 3.434299 CACGTAAACTTAATTCGCACCCT 59.566 43.478 0.00 0.00 0.00 4.34
1811 5292 4.067192 ACGTAAACTTAATTCGCACCCTT 58.933 39.130 0.00 0.00 0.00 3.95
1812 5293 5.120519 CACGTAAACTTAATTCGCACCCTTA 59.879 40.000 0.00 0.00 0.00 2.69
1813 5294 5.876460 ACGTAAACTTAATTCGCACCCTTAT 59.124 36.000 0.00 0.00 0.00 1.73
1814 5295 7.010367 CACGTAAACTTAATTCGCACCCTTATA 59.990 37.037 0.00 0.00 0.00 0.98
1815 5296 7.712205 ACGTAAACTTAATTCGCACCCTTATAT 59.288 33.333 0.00 0.00 0.00 0.86
1816 5297 9.195411 CGTAAACTTAATTCGCACCCTTATATA 57.805 33.333 0.00 0.00 0.00 0.86
1841 5322 0.464036 TAAGCATCCGGTGTGGCTAG 59.536 55.000 0.00 0.00 35.11 3.42
1843 5324 3.031417 GCATCCGGTGTGGCTAGGT 62.031 63.158 0.00 0.00 37.80 3.08
1844 5325 1.144057 CATCCGGTGTGGCTAGGTC 59.856 63.158 0.00 0.00 37.80 3.85
1845 5326 1.001760 ATCCGGTGTGGCTAGGTCT 59.998 57.895 0.00 0.00 37.80 3.85
1850 5331 1.134560 CGGTGTGGCTAGGTCTTAGTC 59.865 57.143 0.00 0.00 34.46 2.59
1853 5334 2.089980 TGTGGCTAGGTCTTAGTCGAC 58.910 52.381 7.70 7.70 36.76 4.20
1870 5359 5.471257 AGTCGACTAAGATTCAACCAAGTC 58.529 41.667 18.46 0.00 0.00 3.01
1871 5360 5.244178 AGTCGACTAAGATTCAACCAAGTCT 59.756 40.000 18.46 0.00 32.96 3.24
1872 5361 6.433404 AGTCGACTAAGATTCAACCAAGTCTA 59.567 38.462 18.46 0.00 32.96 2.59
1874 5363 7.597743 GTCGACTAAGATTCAACCAAGTCTAAA 59.402 37.037 8.70 0.00 32.96 1.85
1875 5364 8.311836 TCGACTAAGATTCAACCAAGTCTAAAT 58.688 33.333 0.00 0.00 32.96 1.40
1882 5371 9.793259 AGATTCAACCAAGTCTAAATTAAGTGA 57.207 29.630 0.00 0.00 0.00 3.41
1883 5372 9.827411 GATTCAACCAAGTCTAAATTAAGTGAC 57.173 33.333 0.00 0.00 0.00 3.67
1884 5373 8.974060 TTCAACCAAGTCTAAATTAAGTGACT 57.026 30.769 0.00 0.00 40.95 3.41
1888 5377 9.841295 AACCAAGTCTAAATTAAGTGACTAACA 57.159 29.630 0.00 0.00 38.63 2.41
1957 5446 9.533831 TTAGTGTAAGATCTCATGGATATAGCA 57.466 33.333 0.00 0.00 34.33 3.49
1958 5447 8.606754 AGTGTAAGATCTCATGGATATAGCAT 57.393 34.615 0.00 0.00 34.33 3.79
1959 5448 8.694540 AGTGTAAGATCTCATGGATATAGCATC 58.305 37.037 0.00 0.00 34.33 3.91
1960 5449 7.647318 GTGTAAGATCTCATGGATATAGCATCG 59.353 40.741 0.00 0.00 34.33 3.84
1961 5450 7.557719 TGTAAGATCTCATGGATATAGCATCGA 59.442 37.037 0.00 0.00 34.33 3.59
1962 5451 6.389830 AGATCTCATGGATATAGCATCGAC 57.610 41.667 0.00 0.00 34.33 4.20
1963 5452 6.128486 AGATCTCATGGATATAGCATCGACT 58.872 40.000 0.00 0.00 34.33 4.18
1964 5453 5.573337 TCTCATGGATATAGCATCGACTG 57.427 43.478 0.00 0.00 0.00 3.51
1965 5454 5.256474 TCTCATGGATATAGCATCGACTGA 58.744 41.667 0.00 0.00 0.00 3.41
1966 5455 5.356470 TCTCATGGATATAGCATCGACTGAG 59.644 44.000 0.00 0.00 0.00 3.35
1967 5456 5.256474 TCATGGATATAGCATCGACTGAGA 58.744 41.667 0.00 0.00 0.00 3.27
1968 5457 5.124617 TCATGGATATAGCATCGACTGAGAC 59.875 44.000 0.00 0.00 0.00 3.36
1969 5458 4.657013 TGGATATAGCATCGACTGAGACT 58.343 43.478 0.00 0.00 0.00 3.24
1970 5459 5.073428 TGGATATAGCATCGACTGAGACTT 58.927 41.667 0.00 0.00 0.00 3.01
1971 5460 5.536538 TGGATATAGCATCGACTGAGACTTT 59.463 40.000 0.00 0.00 0.00 2.66
1972 5461 6.715264 TGGATATAGCATCGACTGAGACTTTA 59.285 38.462 0.00 0.00 0.00 1.85
1973 5462 7.394641 TGGATATAGCATCGACTGAGACTTTAT 59.605 37.037 0.00 0.00 0.00 1.40
1974 5463 8.247562 GGATATAGCATCGACTGAGACTTTATT 58.752 37.037 0.00 0.00 0.00 1.40
1978 5467 9.988815 ATAGCATCGACTGAGACTTTATTAAAT 57.011 29.630 0.00 0.00 0.00 1.40
1979 5468 8.359060 AGCATCGACTGAGACTTTATTAAATC 57.641 34.615 0.00 0.00 0.00 2.17
2018 5520 6.073369 CGAAGTGTTCATTTATGTGACACTG 58.927 40.000 22.54 14.08 45.65 3.66
2021 5523 5.532406 AGTGTTCATTTATGTGACACTGCTT 59.468 36.000 21.83 8.50 45.19 3.91
2150 5655 1.522569 GCGGGACTACCTCAGCAAT 59.477 57.895 0.00 0.00 36.97 3.56
2247 5767 0.034059 CTTGAAGGAGCAGGACGTGT 59.966 55.000 0.00 0.00 0.00 4.49
2252 5772 0.687354 AGGAGCAGGACGTGTTGAAT 59.313 50.000 0.00 0.00 0.00 2.57
2412 5932 2.586792 GGGCCAAGATCGCTGACT 59.413 61.111 4.39 0.00 0.00 3.41
2414 5934 0.678048 GGGCCAAGATCGCTGACTTT 60.678 55.000 4.39 0.00 0.00 2.66
2415 5935 1.168714 GGCCAAGATCGCTGACTTTT 58.831 50.000 0.00 0.00 0.00 2.27
2421 5941 0.960364 GATCGCTGACTTTTGGGCCA 60.960 55.000 0.00 0.00 0.00 5.36
2500 6023 1.605710 GCAGTGCGCTAAATCATGGAT 59.394 47.619 9.73 0.00 37.77 3.41
2510 6033 6.038985 CGCTAAATCATGGATATGAGACGAT 58.961 40.000 0.00 0.00 45.89 3.73
2512 6035 7.253917 CGCTAAATCATGGATATGAGACGATTC 60.254 40.741 0.00 0.00 45.89 2.52
2531 6054 5.509972 CGATTCGTTGAGAGAAGTAGAAGTG 59.490 44.000 0.00 0.00 0.00 3.16
2535 6058 4.378149 CGTTGAGAGAAGTAGAAGTGCGTA 60.378 45.833 0.00 0.00 0.00 4.42
2569 6092 7.482654 TCCTAATCAGATTTGCTATTTCACG 57.517 36.000 0.00 0.00 0.00 4.35
2577 6100 8.630037 TCAGATTTGCTATTTCACGTCTAGATA 58.370 33.333 0.00 0.00 0.00 1.98
2591 6116 9.139734 TCACGTCTAGATATAAAAAGGTACCAT 57.860 33.333 15.94 0.00 0.00 3.55
2685 6231 0.665068 TGTACGCGTTACTGGCAGTG 60.665 55.000 29.65 14.95 0.00 3.66
2725 6271 3.275143 TGATTTTGTTCCTCGTGTGTGT 58.725 40.909 0.00 0.00 0.00 3.72
2807 6365 9.958180 TTCTCCTTTTTCTTCTTTTTCCATTTT 57.042 25.926 0.00 0.00 0.00 1.82
2939 6550 1.228862 AACTTGCAATTCGGGCCCT 60.229 52.632 22.43 0.00 0.00 5.19
2941 6552 0.258774 ACTTGCAATTCGGGCCCTAT 59.741 50.000 22.43 10.57 0.00 2.57
2942 6553 0.954452 CTTGCAATTCGGGCCCTATC 59.046 55.000 22.43 3.26 0.00 2.08
2943 6554 0.550914 TTGCAATTCGGGCCCTATCT 59.449 50.000 22.43 0.00 0.00 1.98
2944 6555 0.550914 TGCAATTCGGGCCCTATCTT 59.449 50.000 22.43 5.00 0.00 2.40
2959 6573 7.280356 GGCCCTATCTTCTTTTGTCATAGTTA 58.720 38.462 0.00 0.00 0.00 2.24
2968 6582 8.877864 TTCTTTTGTCATAGTTACAATCCCAT 57.122 30.769 0.00 0.00 36.75 4.00
2969 6583 8.877864 TCTTTTGTCATAGTTACAATCCCATT 57.122 30.769 0.00 0.00 36.75 3.16
2978 6592 4.466370 AGTTACAATCCCATTCTCGACTCA 59.534 41.667 0.00 0.00 0.00 3.41
2979 6593 5.129485 AGTTACAATCCCATTCTCGACTCAT 59.871 40.000 0.00 0.00 0.00 2.90
2987 6601 4.039730 CCCATTCTCGACTCATAACTGGAT 59.960 45.833 0.00 0.00 0.00 3.41
3040 6655 2.184533 TCCTCAAATCGCAACTAGGGA 58.815 47.619 0.00 0.00 43.93 4.20
3078 6695 4.018779 TCCCAATTTTAAGTCCACCTCGAT 60.019 41.667 0.00 0.00 0.00 3.59
3102 6719 2.803133 GCAACTGAGGCCCAACTTTTTC 60.803 50.000 0.00 0.00 0.00 2.29
3106 6726 1.152118 AGGCCCAACTTTTTCCCCC 60.152 57.895 0.00 0.00 0.00 5.40
3107 6727 1.152118 GGCCCAACTTTTTCCCCCT 60.152 57.895 0.00 0.00 0.00 4.79
3121 6741 0.468029 CCCCCTGTTGCAAGTTCACT 60.468 55.000 0.00 0.00 0.00 3.41
3124 6744 2.301346 CCCTGTTGCAAGTTCACTCTT 58.699 47.619 0.00 0.00 0.00 2.85
3129 6749 5.066505 CCTGTTGCAAGTTCACTCTTAACTT 59.933 40.000 0.00 0.00 45.64 2.66
3136 6756 5.871396 AGTTCACTCTTAACTTGACTGGA 57.129 39.130 0.00 0.00 33.39 3.86
3137 6757 5.602628 AGTTCACTCTTAACTTGACTGGAC 58.397 41.667 0.00 0.00 33.39 4.02
3138 6758 4.238761 TCACTCTTAACTTGACTGGACG 57.761 45.455 0.00 0.00 0.00 4.79
3139 6759 2.731976 CACTCTTAACTTGACTGGACGC 59.268 50.000 0.00 0.00 0.00 5.19
3140 6760 2.288886 ACTCTTAACTTGACTGGACGCC 60.289 50.000 0.00 0.00 0.00 5.68
3141 6761 1.001633 TCTTAACTTGACTGGACGCCC 59.998 52.381 0.00 0.00 0.00 6.13
3142 6762 0.320073 TTAACTTGACTGGACGCCCG 60.320 55.000 0.00 0.00 34.29 6.13
3143 6763 2.162338 TAACTTGACTGGACGCCCGG 62.162 60.000 0.00 0.00 44.64 5.73
3167 6787 4.084888 GCCACCGTGCACGCTAAC 62.085 66.667 33.17 18.01 38.18 2.34
3168 6788 2.357034 CCACCGTGCACGCTAACT 60.357 61.111 33.17 9.56 38.18 2.24
3169 6789 2.667318 CCACCGTGCACGCTAACTG 61.667 63.158 33.17 20.32 38.18 3.16
3170 6790 3.041940 ACCGTGCACGCTAACTGC 61.042 61.111 33.17 0.00 38.18 4.40
3171 6791 3.788766 CCGTGCACGCTAACTGCC 61.789 66.667 33.17 0.00 38.78 4.85
3172 6792 4.134187 CGTGCACGCTAACTGCCG 62.134 66.667 28.16 0.00 38.78 5.69
3173 6793 3.788766 GTGCACGCTAACTGCCGG 61.789 66.667 0.00 0.00 38.78 6.13
3193 6813 4.778143 GACGATGCGGGCCAAGGT 62.778 66.667 4.39 0.00 0.00 3.50
3194 6814 4.778143 ACGATGCGGGCCAAGGTC 62.778 66.667 4.39 0.00 0.00 3.85
3209 6829 4.459089 GTCGCTGACCTGAGGGCC 62.459 72.222 0.00 0.00 35.63 5.80
3212 6832 4.459089 GCTGACCTGAGGGCCGTC 62.459 72.222 18.69 18.69 35.63 4.79
3213 6833 3.775654 CTGACCTGAGGGCCGTCC 61.776 72.222 22.25 7.67 35.63 4.79
3226 6846 3.905678 CGTCCTCAGGGCCGCTAG 61.906 72.222 0.00 0.00 0.00 3.42
3227 6847 3.541713 GTCCTCAGGGCCGCTAGG 61.542 72.222 13.76 13.76 41.62 3.02
3240 6860 3.458163 CTAGGCGGCTCAACGGGA 61.458 66.667 17.67 0.00 0.00 5.14
3241 6861 3.718210 CTAGGCGGCTCAACGGGAC 62.718 68.421 17.67 0.00 0.00 4.46
3254 6874 4.394712 GGGACGGCACACCTGAGG 62.395 72.222 0.00 0.00 0.00 3.86
3255 6875 3.626924 GGACGGCACACCTGAGGT 61.627 66.667 0.00 0.00 35.62 3.85
3284 6904 1.455786 CACTCGGAGTGTGCTAAAACG 59.544 52.381 26.22 0.61 44.96 3.60
3285 6905 1.068127 ACTCGGAGTGTGCTAAAACGT 59.932 47.619 10.41 0.00 30.90 3.99
3286 6906 1.455786 CTCGGAGTGTGCTAAAACGTG 59.544 52.381 0.00 0.00 0.00 4.49
3287 6907 0.511221 CGGAGTGTGCTAAAACGTGG 59.489 55.000 0.00 0.00 0.00 4.94
3288 6908 1.870580 CGGAGTGTGCTAAAACGTGGA 60.871 52.381 0.00 0.00 0.00 4.02
3289 6909 1.798813 GGAGTGTGCTAAAACGTGGAG 59.201 52.381 0.00 0.00 0.00 3.86
3290 6910 2.547218 GGAGTGTGCTAAAACGTGGAGA 60.547 50.000 0.00 0.00 0.00 3.71
3291 6911 3.326747 GAGTGTGCTAAAACGTGGAGAT 58.673 45.455 0.00 0.00 0.00 2.75
3292 6912 3.067106 AGTGTGCTAAAACGTGGAGATG 58.933 45.455 0.00 0.00 0.00 2.90
3293 6913 3.064207 GTGTGCTAAAACGTGGAGATGA 58.936 45.455 0.00 0.00 0.00 2.92
3294 6914 3.123621 GTGTGCTAAAACGTGGAGATGAG 59.876 47.826 0.00 0.00 0.00 2.90
3295 6915 3.006430 TGTGCTAAAACGTGGAGATGAGA 59.994 43.478 0.00 0.00 0.00 3.27
3296 6916 3.368236 GTGCTAAAACGTGGAGATGAGAC 59.632 47.826 0.00 0.00 0.00 3.36
3297 6917 2.599082 GCTAAAACGTGGAGATGAGACG 59.401 50.000 0.00 0.00 39.03 4.18
3298 6918 3.672511 GCTAAAACGTGGAGATGAGACGA 60.673 47.826 0.00 0.00 36.90 4.20
3299 6919 2.349297 AAACGTGGAGATGAGACGAC 57.651 50.000 0.00 0.00 36.90 4.34
3300 6920 1.535833 AACGTGGAGATGAGACGACT 58.464 50.000 0.00 0.00 36.90 4.18
3301 6921 0.805614 ACGTGGAGATGAGACGACTG 59.194 55.000 0.00 0.00 36.90 3.51
3302 6922 0.099613 CGTGGAGATGAGACGACTGG 59.900 60.000 0.00 0.00 35.05 4.00
3303 6923 1.178276 GTGGAGATGAGACGACTGGT 58.822 55.000 0.00 0.00 0.00 4.00
3304 6924 1.133407 GTGGAGATGAGACGACTGGTC 59.867 57.143 0.00 0.00 46.45 4.02
3316 6936 2.265647 GACTGGTCGAGACAAGTAGC 57.734 55.000 12.81 0.00 45.19 3.58
3319 6939 3.011119 ACTGGTCGAGACAAGTAGCTAG 58.989 50.000 11.30 0.00 43.48 3.42
3336 6956 3.169733 GCTAGAAGCGCGTACATATACC 58.830 50.000 8.43 0.00 0.00 2.73
3338 6958 3.936372 AGAAGCGCGTACATATACCAT 57.064 42.857 8.43 0.00 0.00 3.55
3343 6963 3.744426 AGCGCGTACATATACCATTTTCC 59.256 43.478 8.43 0.00 0.00 3.13
3348 6968 7.360607 GCGCGTACATATACCATTTTCCTAATT 60.361 37.037 8.43 0.00 0.00 1.40
3349 6969 8.166706 CGCGTACATATACCATTTTCCTAATTC 58.833 37.037 0.00 0.00 0.00 2.17
3350 6970 8.448615 GCGTACATATACCATTTTCCTAATTCC 58.551 37.037 0.00 0.00 0.00 3.01
3351 6971 9.496873 CGTACATATACCATTTTCCTAATTCCA 57.503 33.333 0.00 0.00 0.00 3.53
3358 6978 7.939784 ACCATTTTCCTAATTCCACTACTTC 57.060 36.000 0.00 0.00 0.00 3.01
3359 6979 6.890268 ACCATTTTCCTAATTCCACTACTTCC 59.110 38.462 0.00 0.00 0.00 3.46
3360 6980 7.119387 CCATTTTCCTAATTCCACTACTTCCT 58.881 38.462 0.00 0.00 0.00 3.36
3361 6981 7.615757 CCATTTTCCTAATTCCACTACTTCCTT 59.384 37.037 0.00 0.00 0.00 3.36
3362 6982 8.678199 CATTTTCCTAATTCCACTACTTCCTTC 58.322 37.037 0.00 0.00 0.00 3.46
3363 6983 5.593679 TCCTAATTCCACTACTTCCTTCG 57.406 43.478 0.00 0.00 0.00 3.79
3364 6984 5.021458 TCCTAATTCCACTACTTCCTTCGT 58.979 41.667 0.00 0.00 0.00 3.85
3365 6985 5.482878 TCCTAATTCCACTACTTCCTTCGTT 59.517 40.000 0.00 0.00 0.00 3.85
3366 6986 5.811100 CCTAATTCCACTACTTCCTTCGTTC 59.189 44.000 0.00 0.00 0.00 3.95
3367 6987 3.672767 TTCCACTACTTCCTTCGTTCC 57.327 47.619 0.00 0.00 0.00 3.62
3368 6988 2.600790 TCCACTACTTCCTTCGTTCCA 58.399 47.619 0.00 0.00 0.00 3.53
3369 6989 2.967201 TCCACTACTTCCTTCGTTCCAA 59.033 45.455 0.00 0.00 0.00 3.53
3370 6990 3.388676 TCCACTACTTCCTTCGTTCCAAA 59.611 43.478 0.00 0.00 0.00 3.28
3371 6991 4.041198 TCCACTACTTCCTTCGTTCCAAAT 59.959 41.667 0.00 0.00 0.00 2.32
3372 6992 4.760204 CCACTACTTCCTTCGTTCCAAATT 59.240 41.667 0.00 0.00 0.00 1.82
3373 6993 5.935789 CCACTACTTCCTTCGTTCCAAATTA 59.064 40.000 0.00 0.00 0.00 1.40
3374 6994 6.128363 CCACTACTTCCTTCGTTCCAAATTAC 60.128 42.308 0.00 0.00 0.00 1.89
3375 6995 6.649557 CACTACTTCCTTCGTTCCAAATTACT 59.350 38.462 0.00 0.00 0.00 2.24
3376 6996 6.872547 ACTACTTCCTTCGTTCCAAATTACTC 59.127 38.462 0.00 0.00 0.00 2.59
3377 6997 4.689345 ACTTCCTTCGTTCCAAATTACTCG 59.311 41.667 0.00 0.00 0.00 4.18
3378 6998 4.261578 TCCTTCGTTCCAAATTACTCGT 57.738 40.909 0.00 0.00 0.00 4.18
3379 6999 4.240096 TCCTTCGTTCCAAATTACTCGTC 58.760 43.478 0.00 0.00 0.00 4.20
3380 7000 3.060363 CCTTCGTTCCAAATTACTCGTCG 59.940 47.826 0.00 0.00 0.00 5.12
3381 7001 3.287312 TCGTTCCAAATTACTCGTCGT 57.713 42.857 0.00 0.00 0.00 4.34
3382 7002 2.981805 TCGTTCCAAATTACTCGTCGTG 59.018 45.455 0.00 0.00 0.00 4.35
3383 7003 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
3384 7004 3.062042 GTTCCAAATTACTCGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
3385 7005 2.679450 TCCAAATTACTCGTCGTGGTG 58.321 47.619 0.00 0.00 0.00 4.17
3386 7006 2.296752 TCCAAATTACTCGTCGTGGTGA 59.703 45.455 0.00 0.00 0.00 4.02
3387 7007 3.061322 CCAAATTACTCGTCGTGGTGAA 58.939 45.455 0.00 0.00 0.00 3.18
3388 7008 3.120786 CCAAATTACTCGTCGTGGTGAAC 60.121 47.826 0.00 0.00 0.00 3.18
3397 7017 3.468063 GTGGTGAACGGAGGGAGT 58.532 61.111 0.00 0.00 0.00 3.85
3398 7018 2.662309 GTGGTGAACGGAGGGAGTA 58.338 57.895 0.00 0.00 0.00 2.59
3399 7019 0.245813 GTGGTGAACGGAGGGAGTAC 59.754 60.000 0.00 0.00 0.00 2.73
3400 7020 0.113776 TGGTGAACGGAGGGAGTACT 59.886 55.000 0.00 0.00 0.00 2.73
3401 7021 1.355381 TGGTGAACGGAGGGAGTACTA 59.645 52.381 0.00 0.00 0.00 1.82
3402 7022 2.022934 GGTGAACGGAGGGAGTACTAG 58.977 57.143 0.00 0.00 0.00 2.57
3403 7023 2.356535 GGTGAACGGAGGGAGTACTAGA 60.357 54.545 0.00 0.00 0.00 2.43
3404 7024 3.553904 GTGAACGGAGGGAGTACTAGAT 58.446 50.000 0.00 0.00 0.00 1.98
3405 7025 3.952967 GTGAACGGAGGGAGTACTAGATT 59.047 47.826 0.00 0.00 0.00 2.40
3406 7026 5.128919 GTGAACGGAGGGAGTACTAGATTA 58.871 45.833 0.00 0.00 0.00 1.75
3407 7027 5.769162 GTGAACGGAGGGAGTACTAGATTAT 59.231 44.000 0.00 0.00 0.00 1.28
3408 7028 6.002704 TGAACGGAGGGAGTACTAGATTATC 58.997 44.000 0.00 0.00 0.00 1.75
3409 7029 5.579753 ACGGAGGGAGTACTAGATTATCA 57.420 43.478 0.00 0.00 0.00 2.15
3410 7030 5.315348 ACGGAGGGAGTACTAGATTATCAC 58.685 45.833 0.00 0.00 0.00 3.06
3411 7031 4.701171 CGGAGGGAGTACTAGATTATCACC 59.299 50.000 0.00 0.00 0.00 4.02
3412 7032 5.018149 GGAGGGAGTACTAGATTATCACCC 58.982 50.000 0.00 0.00 35.53 4.61
3413 7033 5.222379 GGAGGGAGTACTAGATTATCACCCT 60.222 48.000 11.72 11.72 46.30 4.34
3414 7034 6.296435 AGGGAGTACTAGATTATCACCCTT 57.704 41.667 7.10 0.00 41.83 3.95
3415 7035 6.078664 AGGGAGTACTAGATTATCACCCTTG 58.921 44.000 7.10 0.00 41.83 3.61
3416 7036 6.075984 GGGAGTACTAGATTATCACCCTTGA 58.924 44.000 0.00 0.00 35.73 3.02
3417 7037 6.015265 GGGAGTACTAGATTATCACCCTTGAC 60.015 46.154 0.00 0.00 33.38 3.18
3418 7038 6.550108 GGAGTACTAGATTATCACCCTTGACA 59.450 42.308 0.00 0.00 33.38 3.58
3419 7039 7.255660 GGAGTACTAGATTATCACCCTTGACAG 60.256 44.444 0.00 0.00 33.38 3.51
3420 7040 7.126733 AGTACTAGATTATCACCCTTGACAGT 58.873 38.462 0.00 0.00 33.38 3.55
3421 7041 6.227298 ACTAGATTATCACCCTTGACAGTG 57.773 41.667 0.00 0.00 33.38 3.66
3422 7042 5.721960 ACTAGATTATCACCCTTGACAGTGT 59.278 40.000 0.00 0.00 33.38 3.55
3423 7043 4.836825 AGATTATCACCCTTGACAGTGTG 58.163 43.478 0.00 0.00 33.38 3.82
3424 7044 4.287067 AGATTATCACCCTTGACAGTGTGT 59.713 41.667 0.00 0.00 33.38 3.72
3425 7045 2.260844 ATCACCCTTGACAGTGTGTG 57.739 50.000 0.00 2.00 33.38 3.82
3426 7046 0.463654 TCACCCTTGACAGTGTGTGC 60.464 55.000 0.00 0.00 35.45 4.57
3427 7047 1.523711 ACCCTTGACAGTGTGTGCG 60.524 57.895 0.00 0.00 0.00 5.34
3428 7048 2.253758 CCCTTGACAGTGTGTGCGG 61.254 63.158 0.00 0.00 0.00 5.69
3429 7049 1.523711 CCTTGACAGTGTGTGCGGT 60.524 57.895 0.00 0.00 0.00 5.68
3430 7050 1.643292 CTTGACAGTGTGTGCGGTG 59.357 57.895 0.00 0.00 0.00 4.94
3431 7051 0.809636 CTTGACAGTGTGTGCGGTGA 60.810 55.000 0.00 0.00 0.00 4.02
3432 7052 0.809636 TTGACAGTGTGTGCGGTGAG 60.810 55.000 0.00 0.00 0.00 3.51
3433 7053 1.956170 GACAGTGTGTGCGGTGAGG 60.956 63.158 0.00 0.00 0.00 3.86
3434 7054 3.349006 CAGTGTGTGCGGTGAGGC 61.349 66.667 0.00 0.00 0.00 4.70
3435 7055 3.860605 AGTGTGTGCGGTGAGGCA 61.861 61.111 0.00 0.00 41.45 4.75
3436 7056 3.349006 GTGTGTGCGGTGAGGCAG 61.349 66.667 0.00 0.00 44.93 4.85
3437 7057 4.624364 TGTGTGCGGTGAGGCAGG 62.624 66.667 0.00 0.00 44.93 4.85
3438 7058 4.314440 GTGTGCGGTGAGGCAGGA 62.314 66.667 0.00 0.00 44.93 3.86
3439 7059 4.007644 TGTGCGGTGAGGCAGGAG 62.008 66.667 0.00 0.00 44.93 3.69
3440 7060 4.767255 GTGCGGTGAGGCAGGAGG 62.767 72.222 0.00 0.00 44.93 4.30
3442 7062 3.474570 GCGGTGAGGCAGGAGGAT 61.475 66.667 0.00 0.00 0.00 3.24
3443 7063 2.503061 CGGTGAGGCAGGAGGATG 59.497 66.667 0.00 0.00 0.00 3.51
3444 7064 2.060383 CGGTGAGGCAGGAGGATGA 61.060 63.158 0.00 0.00 0.00 2.92
3445 7065 1.406065 CGGTGAGGCAGGAGGATGAT 61.406 60.000 0.00 0.00 0.00 2.45
3446 7066 0.396060 GGTGAGGCAGGAGGATGATC 59.604 60.000 0.00 0.00 0.00 2.92
3447 7067 1.126488 GTGAGGCAGGAGGATGATCA 58.874 55.000 0.00 0.00 0.00 2.92
3448 7068 1.487976 GTGAGGCAGGAGGATGATCAA 59.512 52.381 0.00 0.00 0.00 2.57
3449 7069 1.487976 TGAGGCAGGAGGATGATCAAC 59.512 52.381 0.00 0.00 0.00 3.18
3450 7070 0.842635 AGGCAGGAGGATGATCAACC 59.157 55.000 13.96 13.96 0.00 3.77
3451 7071 0.548031 GGCAGGAGGATGATCAACCA 59.452 55.000 22.67 0.00 0.00 3.67
3452 7072 1.144503 GGCAGGAGGATGATCAACCAT 59.855 52.381 22.67 8.90 0.00 3.55
3453 7073 2.423947 GGCAGGAGGATGATCAACCATT 60.424 50.000 22.67 4.15 0.00 3.16
3454 7074 2.621998 GCAGGAGGATGATCAACCATTG 59.378 50.000 22.67 17.06 0.00 2.82
3455 7075 3.894759 CAGGAGGATGATCAACCATTGT 58.105 45.455 22.67 3.04 0.00 2.71
3456 7076 4.275810 CAGGAGGATGATCAACCATTGTT 58.724 43.478 22.67 2.66 34.14 2.83
3483 7103 9.855361 GTTATGATATTTTTGAGACAGTGATCG 57.145 33.333 0.00 0.00 0.00 3.69
3484 7104 9.599866 TTATGATATTTTTGAGACAGTGATCGT 57.400 29.630 0.00 0.00 0.00 3.73
3486 7106 8.996024 TGATATTTTTGAGACAGTGATCGTAA 57.004 30.769 0.00 0.00 0.00 3.18
3487 7107 9.599866 TGATATTTTTGAGACAGTGATCGTAAT 57.400 29.630 0.00 0.00 0.00 1.89
3490 7110 5.530519 TTTGAGACAGTGATCGTAATTGC 57.469 39.130 0.00 0.00 0.00 3.56
3491 7111 4.456280 TGAGACAGTGATCGTAATTGCT 57.544 40.909 0.00 0.00 0.00 3.91
3492 7112 4.424626 TGAGACAGTGATCGTAATTGCTC 58.575 43.478 0.00 0.00 0.00 4.26
3493 7113 3.786635 AGACAGTGATCGTAATTGCTCC 58.213 45.455 0.00 0.00 0.00 4.70
3494 7114 3.195610 AGACAGTGATCGTAATTGCTCCA 59.804 43.478 0.00 0.00 0.00 3.86
3495 7115 3.262420 ACAGTGATCGTAATTGCTCCAC 58.738 45.455 0.00 0.00 0.00 4.02
3496 7116 3.055819 ACAGTGATCGTAATTGCTCCACT 60.056 43.478 0.00 6.54 34.17 4.00
3497 7117 3.553511 CAGTGATCGTAATTGCTCCACTC 59.446 47.826 8.52 0.00 31.85 3.51
3498 7118 3.195610 AGTGATCGTAATTGCTCCACTCA 59.804 43.478 6.54 0.00 0.00 3.41
3499 7119 3.553511 GTGATCGTAATTGCTCCACTCAG 59.446 47.826 0.00 0.00 0.00 3.35
3500 7120 2.672961 TCGTAATTGCTCCACTCAGG 57.327 50.000 0.00 0.00 39.47 3.86
3501 7121 1.207089 TCGTAATTGCTCCACTCAGGG 59.793 52.381 0.00 0.00 38.24 4.45
3502 7122 1.383523 GTAATTGCTCCACTCAGGGC 58.616 55.000 0.00 0.00 38.24 5.19
3503 7123 0.991146 TAATTGCTCCACTCAGGGCA 59.009 50.000 0.00 0.00 40.40 5.36
3504 7124 3.249805 TTGCTCCACTCAGGGCAA 58.750 55.556 0.00 0.00 45.34 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.388310 TGTTCGTGGACTTCACACAA 57.612 45.000 0.00 0.00 46.36 3.33
15 16 1.234821 TTGGCATGTTCGTGGACTTC 58.765 50.000 0.00 0.00 0.00 3.01
20 21 3.476552 AGGTATATTGGCATGTTCGTGG 58.523 45.455 0.00 0.00 0.00 4.94
37 38 9.985730 TCTTTTCTTTCGTTATCTTTGTAGGTA 57.014 29.630 0.00 0.00 0.00 3.08
108 110 4.213513 TGCATGGTATATTGGCATGTTCA 58.786 39.130 0.00 0.00 0.00 3.18
122 124 5.335269 CGTTTACCAAGTTCATTGCATGGTA 60.335 40.000 8.67 8.67 42.38 3.25
131 133 6.585695 TCTCTACTCGTTTACCAAGTTCAT 57.414 37.500 0.00 0.00 0.00 2.57
132 134 6.585695 ATCTCTACTCGTTTACCAAGTTCA 57.414 37.500 0.00 0.00 0.00 3.18
169 171 5.069318 TCTAGCACATTTTCATGTCCACAA 58.931 37.500 0.00 0.00 42.14 3.33
170 172 4.650734 TCTAGCACATTTTCATGTCCACA 58.349 39.130 0.00 0.00 42.14 4.17
184 186 1.209261 TGCGGGAATTCATCTAGCACA 59.791 47.619 7.93 0.00 36.20 4.57
251 253 1.737363 GCACAAAAGCACCGTGGAAAA 60.737 47.619 0.00 0.00 0.00 2.29
255 257 1.299316 CAGCACAAAAGCACCGTGG 60.299 57.895 0.00 0.00 36.85 4.94
291 293 7.962918 CGTCAGAATTTCCGAAAGTAAATGATT 59.037 33.333 0.00 0.00 0.00 2.57
292 294 7.414098 CCGTCAGAATTTCCGAAAGTAAATGAT 60.414 37.037 0.00 0.00 0.00 2.45
300 302 3.932710 TCATCCGTCAGAATTTCCGAAAG 59.067 43.478 0.00 0.00 0.00 2.62
304 306 2.893637 AGTCATCCGTCAGAATTTCCG 58.106 47.619 0.00 0.00 0.00 4.30
335 1217 4.861196 ACTGTATCAGTTGCCTAGAGAGA 58.139 43.478 0.00 0.00 42.59 3.10
362 1244 3.884895 TCAGTTGCCTCTCTCACAAAAA 58.115 40.909 0.00 0.00 0.00 1.94
363 1245 3.558931 TCAGTTGCCTCTCTCACAAAA 57.441 42.857 0.00 0.00 0.00 2.44
364 1246 3.777106 ATCAGTTGCCTCTCTCACAAA 57.223 42.857 0.00 0.00 0.00 2.83
365 1247 3.578282 TGTATCAGTTGCCTCTCTCACAA 59.422 43.478 0.00 0.00 0.00 3.33
366 1248 3.165071 TGTATCAGTTGCCTCTCTCACA 58.835 45.455 0.00 0.00 0.00 3.58
367 1249 3.876274 TGTATCAGTTGCCTCTCTCAC 57.124 47.619 0.00 0.00 0.00 3.51
368 1250 5.426689 AAATGTATCAGTTGCCTCTCTCA 57.573 39.130 0.00 0.00 0.00 3.27
369 1251 6.112058 AGAAAATGTATCAGTTGCCTCTCTC 58.888 40.000 0.00 0.00 0.00 3.20
370 1252 6.059787 AGAAAATGTATCAGTTGCCTCTCT 57.940 37.500 0.00 0.00 0.00 3.10
371 1253 6.749923 AAGAAAATGTATCAGTTGCCTCTC 57.250 37.500 0.00 0.00 0.00 3.20
372 1254 7.337942 CCTAAAGAAAATGTATCAGTTGCCTCT 59.662 37.037 0.00 0.00 0.00 3.69
373 1255 7.415653 CCCTAAAGAAAATGTATCAGTTGCCTC 60.416 40.741 0.00 0.00 0.00 4.70
374 1256 6.378280 CCCTAAAGAAAATGTATCAGTTGCCT 59.622 38.462 0.00 0.00 0.00 4.75
375 1257 6.377146 TCCCTAAAGAAAATGTATCAGTTGCC 59.623 38.462 0.00 0.00 0.00 4.52
376 1258 7.391148 TCCCTAAAGAAAATGTATCAGTTGC 57.609 36.000 0.00 0.00 0.00 4.17
377 1259 7.415653 GCCTCCCTAAAGAAAATGTATCAGTTG 60.416 40.741 0.00 0.00 0.00 3.16
378 1260 6.603599 GCCTCCCTAAAGAAAATGTATCAGTT 59.396 38.462 0.00 0.00 0.00 3.16
379 1261 6.122964 GCCTCCCTAAAGAAAATGTATCAGT 58.877 40.000 0.00 0.00 0.00 3.41
380 1262 6.122277 TGCCTCCCTAAAGAAAATGTATCAG 58.878 40.000 0.00 0.00 0.00 2.90
381 1263 6.073447 TGCCTCCCTAAAGAAAATGTATCA 57.927 37.500 0.00 0.00 0.00 2.15
382 1264 6.603599 AGTTGCCTCCCTAAAGAAAATGTATC 59.396 38.462 0.00 0.00 0.00 2.24
383 1265 6.378280 CAGTTGCCTCCCTAAAGAAAATGTAT 59.622 38.462 0.00 0.00 0.00 2.29
384 1266 5.710099 CAGTTGCCTCCCTAAAGAAAATGTA 59.290 40.000 0.00 0.00 0.00 2.29
385 1267 4.524328 CAGTTGCCTCCCTAAAGAAAATGT 59.476 41.667 0.00 0.00 0.00 2.71
386 1268 4.766891 TCAGTTGCCTCCCTAAAGAAAATG 59.233 41.667 0.00 0.00 0.00 2.32
387 1269 4.998051 TCAGTTGCCTCCCTAAAGAAAAT 58.002 39.130 0.00 0.00 0.00 1.82
388 1270 4.141251 ACTCAGTTGCCTCCCTAAAGAAAA 60.141 41.667 0.00 0.00 0.00 2.29
389 1271 3.394606 ACTCAGTTGCCTCCCTAAAGAAA 59.605 43.478 0.00 0.00 0.00 2.52
390 1272 2.979678 ACTCAGTTGCCTCCCTAAAGAA 59.020 45.455 0.00 0.00 0.00 2.52
391 1273 2.621070 ACTCAGTTGCCTCCCTAAAGA 58.379 47.619 0.00 0.00 0.00 2.52
392 1274 3.515901 ACTACTCAGTTGCCTCCCTAAAG 59.484 47.826 0.00 0.00 0.00 1.85
393 1275 3.517612 ACTACTCAGTTGCCTCCCTAAA 58.482 45.455 0.00 0.00 0.00 1.85
394 1276 3.185880 ACTACTCAGTTGCCTCCCTAA 57.814 47.619 0.00 0.00 0.00 2.69
395 1277 2.921834 ACTACTCAGTTGCCTCCCTA 57.078 50.000 0.00 0.00 0.00 3.53
396 1278 2.225293 TGTACTACTCAGTTGCCTCCCT 60.225 50.000 0.00 0.00 36.14 4.20
397 1279 2.166664 CTGTACTACTCAGTTGCCTCCC 59.833 54.545 0.00 0.00 36.14 4.30
398 1280 2.826725 ACTGTACTACTCAGTTGCCTCC 59.173 50.000 0.00 0.00 42.50 4.30
405 1287 7.769507 TCTGATCGATTAACTGTACTACTCAGT 59.230 37.037 0.00 0.00 46.30 3.41
406 1288 8.144155 TCTGATCGATTAACTGTACTACTCAG 57.856 38.462 0.00 0.00 38.68 3.35
407 1289 8.678593 ATCTGATCGATTAACTGTACTACTCA 57.321 34.615 0.00 0.00 0.00 3.41
409 1291 9.999660 TCTATCTGATCGATTAACTGTACTACT 57.000 33.333 0.00 0.00 33.48 2.57
412 1294 9.562408 TTCTCTATCTGATCGATTAACTGTACT 57.438 33.333 0.00 0.00 33.48 2.73
484 1367 2.063266 CGAAAGCCTAGTTTACGTGCA 58.937 47.619 0.00 0.00 0.00 4.57
509 1392 9.036671 CCGAAAGCCTTTTTATTTAGACAAAAA 57.963 29.630 0.00 0.00 33.73 1.94
510 1393 8.198778 ACCGAAAGCCTTTTTATTTAGACAAAA 58.801 29.630 0.00 0.00 0.00 2.44
511 1394 7.718525 ACCGAAAGCCTTTTTATTTAGACAAA 58.281 30.769 0.00 0.00 0.00 2.83
512 1395 7.013464 TGACCGAAAGCCTTTTTATTTAGACAA 59.987 33.333 0.00 0.00 0.00 3.18
513 1396 6.487331 TGACCGAAAGCCTTTTTATTTAGACA 59.513 34.615 0.00 0.00 0.00 3.41
514 1397 6.905578 TGACCGAAAGCCTTTTTATTTAGAC 58.094 36.000 0.00 0.00 0.00 2.59
515 1398 7.696992 ATGACCGAAAGCCTTTTTATTTAGA 57.303 32.000 0.00 0.00 0.00 2.10
516 1399 8.757164 AAATGACCGAAAGCCTTTTTATTTAG 57.243 30.769 0.00 0.00 0.00 1.85
517 1400 9.549078 AAAAATGACCGAAAGCCTTTTTATTTA 57.451 25.926 0.00 0.00 0.00 1.40
518 1401 8.445275 AAAAATGACCGAAAGCCTTTTTATTT 57.555 26.923 0.00 0.00 0.00 1.40
519 1402 7.172532 GGAAAAATGACCGAAAGCCTTTTTATT 59.827 33.333 0.00 0.00 0.00 1.40
520 1403 6.649141 GGAAAAATGACCGAAAGCCTTTTTAT 59.351 34.615 0.00 0.00 0.00 1.40
521 1404 5.986741 GGAAAAATGACCGAAAGCCTTTTTA 59.013 36.000 0.00 0.00 0.00 1.52
522 1405 4.814234 GGAAAAATGACCGAAAGCCTTTTT 59.186 37.500 0.00 0.00 0.00 1.94
523 1406 4.377021 GGAAAAATGACCGAAAGCCTTTT 58.623 39.130 0.00 0.00 0.00 2.27
524 1407 3.244078 GGGAAAAATGACCGAAAGCCTTT 60.244 43.478 0.00 0.00 0.00 3.11
525 1408 2.299013 GGGAAAAATGACCGAAAGCCTT 59.701 45.455 0.00 0.00 0.00 4.35
526 1409 1.893137 GGGAAAAATGACCGAAAGCCT 59.107 47.619 0.00 0.00 0.00 4.58
527 1410 1.616374 TGGGAAAAATGACCGAAAGCC 59.384 47.619 0.00 0.00 0.00 4.35
528 1411 3.592898 ATGGGAAAAATGACCGAAAGC 57.407 42.857 0.00 0.00 0.00 3.51
529 1412 4.021544 TCCAATGGGAAAAATGACCGAAAG 60.022 41.667 0.00 0.00 41.32 2.62
530 1413 3.898123 TCCAATGGGAAAAATGACCGAAA 59.102 39.130 0.00 0.00 41.32 3.46
531 1414 3.501349 TCCAATGGGAAAAATGACCGAA 58.499 40.909 0.00 0.00 41.32 4.30
532 1415 3.162147 TCCAATGGGAAAAATGACCGA 57.838 42.857 0.00 0.00 41.32 4.69
592 1565 4.965200 ACCTCTATCCAATACTTCCAGC 57.035 45.455 0.00 0.00 0.00 4.85
618 1591 2.877866 TCCAATACTTCCCCGCAAAAA 58.122 42.857 0.00 0.00 0.00 1.94
620 1593 2.818751 ATCCAATACTTCCCCGCAAA 57.181 45.000 0.00 0.00 0.00 3.68
621 1594 3.042682 TCTATCCAATACTTCCCCGCAA 58.957 45.455 0.00 0.00 0.00 4.85
623 1596 2.028020 CCTCTATCCAATACTTCCCCGC 60.028 54.545 0.00 0.00 0.00 6.13
625 1598 4.202472 CCAACCTCTATCCAATACTTCCCC 60.202 50.000 0.00 0.00 0.00 4.81
626 1599 4.412528 ACCAACCTCTATCCAATACTTCCC 59.587 45.833 0.00 0.00 0.00 3.97
627 1600 5.632034 ACCAACCTCTATCCAATACTTCC 57.368 43.478 0.00 0.00 0.00 3.46
628 1601 6.706716 GCTTACCAACCTCTATCCAATACTTC 59.293 42.308 0.00 0.00 0.00 3.01
630 1603 5.071923 GGCTTACCAACCTCTATCCAATACT 59.928 44.000 0.00 0.00 35.26 2.12
749 2461 1.512771 CGTGCAGTTTCTTTTTGACGC 59.487 47.619 0.00 0.00 0.00 5.19
830 3413 1.247567 CAAACCTACCAACCTGCTGG 58.752 55.000 8.29 8.29 42.68 4.85
941 4095 2.190841 TCGCGCGGTATCTCATGGA 61.191 57.895 31.69 1.90 0.00 3.41
961 4116 2.202932 CTTGGATGAGGACGGGCG 60.203 66.667 0.00 0.00 0.00 6.13
964 4119 4.814900 CGTCTTGGATGAGGACGG 57.185 61.111 6.80 0.00 45.81 4.79
989 4179 0.321122 GATCACCATGGGATCGGAGC 60.321 60.000 18.09 4.50 32.62 4.70
1038 4228 4.054825 CGGTGTGGGCATGGCAAC 62.055 66.667 19.67 19.67 0.00 4.17
1239 4541 4.082571 TCGGGTAAGTAGTTCTGTAGTTGC 60.083 45.833 0.00 0.00 0.00 4.17
1247 4549 5.008811 CAGAATCGATCGGGTAAGTAGTTCT 59.991 44.000 16.41 8.15 0.00 3.01
1248 4550 5.213675 CAGAATCGATCGGGTAAGTAGTTC 58.786 45.833 16.41 6.23 0.00 3.01
1250 4552 3.568853 CCAGAATCGATCGGGTAAGTAGT 59.431 47.826 16.41 0.00 38.47 2.73
1251 4553 3.057456 CCCAGAATCGATCGGGTAAGTAG 60.057 52.174 16.41 0.00 41.40 2.57
1252 4554 2.889045 CCCAGAATCGATCGGGTAAGTA 59.111 50.000 16.41 0.00 41.40 2.24
1253 4555 1.687123 CCCAGAATCGATCGGGTAAGT 59.313 52.381 16.41 0.00 41.40 2.24
1254 4556 1.605712 GCCCAGAATCGATCGGGTAAG 60.606 57.143 22.04 3.13 41.40 2.34
1260 4562 1.668419 AAAAGGCCCAGAATCGATCG 58.332 50.000 9.36 9.36 0.00 3.69
1261 4563 3.057946 GCATAAAAGGCCCAGAATCGATC 60.058 47.826 0.00 0.00 0.00 3.69
1262 4564 2.887152 GCATAAAAGGCCCAGAATCGAT 59.113 45.455 0.00 0.00 0.00 3.59
1282 4584 6.870971 AATATCAATCAATTGGCAATTGGC 57.129 33.333 38.39 24.20 46.40 4.52
1285 4587 8.926374 TCCACTAATATCAATCAATTGGCAATT 58.074 29.630 19.39 19.39 38.30 2.32
1286 4588 8.481492 TCCACTAATATCAATCAATTGGCAAT 57.519 30.769 6.96 6.96 38.30 3.56
1303 4605 2.619074 GCCTGAAGTTGGCTCCACTAAT 60.619 50.000 0.00 0.00 46.38 1.73
1304 4606 1.271379 GCCTGAAGTTGGCTCCACTAA 60.271 52.381 0.00 0.00 46.38 2.24
1315 4617 1.656441 CTTTGCTGCGCCTGAAGTT 59.344 52.632 4.18 0.00 0.00 2.66
1323 4631 1.551503 GGTTTCAAGCTTTGCTGCGC 61.552 55.000 0.00 0.00 39.62 6.09
1335 4773 3.648545 CCCCCAAAATGTTAGGGTTTCAA 59.351 43.478 0.00 0.00 41.16 2.69
1358 4796 1.727857 CGCGCACCTGGATTTAACAAC 60.728 52.381 8.75 0.00 0.00 3.32
1537 4980 2.888863 GAGGAGGACGTGGCTGAG 59.111 66.667 0.00 0.00 0.00 3.35
1580 5023 4.457496 CGAGGCTCATGCACCGGT 62.457 66.667 15.95 0.00 41.91 5.28
1637 5086 3.680842 GACGACAAGTCTTGGGTGT 57.319 52.632 16.85 11.16 46.13 4.16
1771 5224 1.528129 GTGACCTTTTCAGAGGCAGG 58.472 55.000 0.00 0.00 40.65 4.85
1812 5293 7.878127 GCCACACCGGATGCTTATATATTATAT 59.122 37.037 9.46 1.95 36.56 0.86
1813 5294 7.070696 AGCCACACCGGATGCTTATATATTATA 59.929 37.037 9.46 0.00 36.56 0.98
1814 5295 6.055588 GCCACACCGGATGCTTATATATTAT 58.944 40.000 9.46 0.00 36.56 1.28
1815 5296 5.188948 AGCCACACCGGATGCTTATATATTA 59.811 40.000 9.46 0.00 36.56 0.98
1816 5297 4.019321 AGCCACACCGGATGCTTATATATT 60.019 41.667 9.46 0.00 36.56 1.28
1817 5298 3.519510 AGCCACACCGGATGCTTATATAT 59.480 43.478 9.46 0.00 36.56 0.86
1818 5299 2.903784 AGCCACACCGGATGCTTATATA 59.096 45.455 9.46 0.00 36.56 0.86
1819 5300 1.699634 AGCCACACCGGATGCTTATAT 59.300 47.619 9.46 0.00 36.56 0.86
1820 5301 1.128200 AGCCACACCGGATGCTTATA 58.872 50.000 9.46 0.00 36.56 0.98
1821 5302 1.070758 CTAGCCACACCGGATGCTTAT 59.929 52.381 9.46 0.00 36.56 1.73
1822 5303 0.464036 CTAGCCACACCGGATGCTTA 59.536 55.000 9.46 0.66 36.56 3.09
1823 5304 1.221840 CTAGCCACACCGGATGCTT 59.778 57.895 9.46 0.00 36.56 3.91
1824 5305 2.735772 CCTAGCCACACCGGATGCT 61.736 63.158 9.46 12.66 36.56 3.79
1825 5306 2.203070 CCTAGCCACACCGGATGC 60.203 66.667 9.46 4.62 36.56 3.91
1826 5307 1.144057 GACCTAGCCACACCGGATG 59.856 63.158 9.46 5.88 36.56 3.51
1827 5308 0.617820 AAGACCTAGCCACACCGGAT 60.618 55.000 9.46 0.00 36.56 4.18
1828 5309 0.040058 TAAGACCTAGCCACACCGGA 59.960 55.000 9.46 0.00 36.56 5.14
1829 5310 0.460311 CTAAGACCTAGCCACACCGG 59.540 60.000 0.00 0.00 38.11 5.28
1830 5311 1.134560 GACTAAGACCTAGCCACACCG 59.865 57.143 0.00 0.00 0.00 4.94
1832 5313 2.089980 TCGACTAAGACCTAGCCACAC 58.910 52.381 0.00 0.00 0.00 3.82
1833 5314 2.089980 GTCGACTAAGACCTAGCCACA 58.910 52.381 8.70 0.00 35.22 4.17
1834 5315 2.367486 AGTCGACTAAGACCTAGCCAC 58.633 52.381 18.46 0.00 41.83 5.01
1835 5316 2.803030 AGTCGACTAAGACCTAGCCA 57.197 50.000 18.46 0.00 41.83 4.75
1845 5326 6.989659 ACTTGGTTGAATCTTAGTCGACTAA 58.010 36.000 30.65 30.65 36.99 2.24
1850 5331 7.884816 TTTAGACTTGGTTGAATCTTAGTCG 57.115 36.000 5.92 0.00 37.62 4.18
1859 5348 8.974060 AGTCACTTAATTTAGACTTGGTTGAA 57.026 30.769 0.00 0.00 38.08 2.69
1931 5420 9.533831 TGCTATATCCATGAGATCTTACACTAA 57.466 33.333 0.00 0.00 36.33 2.24
1932 5421 9.706529 ATGCTATATCCATGAGATCTTACACTA 57.293 33.333 0.00 0.00 36.33 2.74
1933 5422 8.606754 ATGCTATATCCATGAGATCTTACACT 57.393 34.615 0.00 0.00 36.33 3.55
1934 5423 7.647318 CGATGCTATATCCATGAGATCTTACAC 59.353 40.741 0.00 0.00 36.33 2.90
1935 5424 7.557719 TCGATGCTATATCCATGAGATCTTACA 59.442 37.037 0.00 0.00 36.33 2.41
1936 5425 7.860373 GTCGATGCTATATCCATGAGATCTTAC 59.140 40.741 0.00 0.00 36.33 2.34
1937 5426 7.777440 AGTCGATGCTATATCCATGAGATCTTA 59.223 37.037 0.00 0.00 36.33 2.10
1938 5427 6.606796 AGTCGATGCTATATCCATGAGATCTT 59.393 38.462 0.00 0.00 36.33 2.40
1939 5428 6.039605 CAGTCGATGCTATATCCATGAGATCT 59.960 42.308 0.00 0.00 36.33 2.75
1940 5429 6.039159 TCAGTCGATGCTATATCCATGAGATC 59.961 42.308 0.00 0.00 36.33 2.75
1941 5430 5.890419 TCAGTCGATGCTATATCCATGAGAT 59.110 40.000 0.00 0.00 39.15 2.75
1942 5431 5.256474 TCAGTCGATGCTATATCCATGAGA 58.744 41.667 0.00 0.00 0.00 3.27
1943 5432 5.356470 TCTCAGTCGATGCTATATCCATGAG 59.644 44.000 0.00 0.00 0.00 2.90
1944 5433 5.124617 GTCTCAGTCGATGCTATATCCATGA 59.875 44.000 0.00 0.00 0.00 3.07
1945 5434 5.125257 AGTCTCAGTCGATGCTATATCCATG 59.875 44.000 0.00 0.00 0.00 3.66
1946 5435 5.260424 AGTCTCAGTCGATGCTATATCCAT 58.740 41.667 0.00 0.00 0.00 3.41
1947 5436 4.657013 AGTCTCAGTCGATGCTATATCCA 58.343 43.478 0.00 0.00 0.00 3.41
1948 5437 5.637006 AAGTCTCAGTCGATGCTATATCC 57.363 43.478 0.00 0.00 0.00 2.59
1952 5441 9.988815 ATTTAATAAAGTCTCAGTCGATGCTAT 57.011 29.630 0.00 0.00 0.00 2.97
1953 5442 9.464714 GATTTAATAAAGTCTCAGTCGATGCTA 57.535 33.333 0.00 0.00 0.00 3.49
1954 5443 8.200792 AGATTTAATAAAGTCTCAGTCGATGCT 58.799 33.333 0.00 0.00 0.00 3.79
1955 5444 8.359060 AGATTTAATAAAGTCTCAGTCGATGC 57.641 34.615 0.00 0.00 0.00 3.91
1956 5445 9.521503 TGAGATTTAATAAAGTCTCAGTCGATG 57.478 33.333 16.49 0.00 41.40 3.84
1958 5447 9.574458 CTTGAGATTTAATAAAGTCTCAGTCGA 57.426 33.333 18.14 9.84 45.36 4.20
1959 5448 9.360093 ACTTGAGATTTAATAAAGTCTCAGTCG 57.640 33.333 18.14 15.05 45.36 4.18
1972 5461 9.307121 CTTCGTCTGACATACTTGAGATTTAAT 57.693 33.333 8.73 0.00 0.00 1.40
1973 5462 8.304596 ACTTCGTCTGACATACTTGAGATTTAA 58.695 33.333 8.73 0.00 0.00 1.52
1974 5463 7.755373 CACTTCGTCTGACATACTTGAGATTTA 59.245 37.037 8.73 0.00 0.00 1.40
1975 5464 6.587990 CACTTCGTCTGACATACTTGAGATTT 59.412 38.462 8.73 0.00 0.00 2.17
1976 5465 6.096036 CACTTCGTCTGACATACTTGAGATT 58.904 40.000 8.73 0.00 0.00 2.40
1977 5466 5.184096 ACACTTCGTCTGACATACTTGAGAT 59.816 40.000 8.73 0.00 0.00 2.75
1978 5467 4.519350 ACACTTCGTCTGACATACTTGAGA 59.481 41.667 8.73 0.00 0.00 3.27
1979 5468 4.799678 ACACTTCGTCTGACATACTTGAG 58.200 43.478 8.73 0.00 0.00 3.02
2014 5516 7.010738 CCAAATCCTTGCAAATTATAAGCAGTG 59.989 37.037 0.00 0.00 39.72 3.66
2018 5520 7.712205 ACATCCAAATCCTTGCAAATTATAAGC 59.288 33.333 0.00 0.00 0.00 3.09
2021 5523 8.303780 TCACATCCAAATCCTTGCAAATTATA 57.696 30.769 0.00 0.00 0.00 0.98
2134 5639 2.611225 CTCATTGCTGAGGTAGTCCC 57.389 55.000 0.00 0.00 44.40 4.46
2150 5655 1.301716 GAAGCCGGTGTTGAGCTCA 60.302 57.895 13.74 13.74 35.30 4.26
2218 5738 2.747855 CCTTCAAGCCTGCGGACC 60.748 66.667 0.00 0.00 0.00 4.46
2222 5742 2.359107 TGCTCCTTCAAGCCTGCG 60.359 61.111 0.00 0.00 41.77 5.18
2247 5767 1.009078 CGCCGCTTCATCTGATTCAA 58.991 50.000 0.00 0.00 0.00 2.69
2252 5772 4.081185 TGCCGCCGCTTCATCTGA 62.081 61.111 0.00 0.00 35.36 3.27
2412 5932 1.387737 CCCTGAGGATGGCCCAAAA 59.612 57.895 0.00 0.00 37.41 2.44
2414 5934 3.743017 GCCCTGAGGATGGCCCAA 61.743 66.667 0.00 0.00 41.97 4.12
2421 5941 2.525381 CCTAGCGGCCCTGAGGAT 60.525 66.667 0.00 0.00 33.47 3.24
2481 6004 4.692155 TCATATCCATGATTTAGCGCACTG 59.308 41.667 11.47 0.00 36.22 3.66
2495 6018 5.241728 TCTCAACGAATCGTCTCATATCCAT 59.758 40.000 9.32 0.00 39.99 3.41
2500 6023 5.354513 ACTTCTCTCAACGAATCGTCTCATA 59.645 40.000 9.32 0.00 39.99 2.15
2510 6033 4.547532 GCACTTCTACTTCTCTCAACGAA 58.452 43.478 0.00 0.00 0.00 3.85
2512 6035 2.911723 CGCACTTCTACTTCTCTCAACG 59.088 50.000 0.00 0.00 0.00 4.10
2546 6069 7.225538 AGACGTGAAATAGCAAATCTGATTAGG 59.774 37.037 2.85 0.78 0.00 2.69
2652 6180 3.370978 ACGCGTACAGAAAAGGATCAATG 59.629 43.478 11.67 0.00 0.00 2.82
2685 6231 1.322538 AAATGGATCAACAGCGGCCC 61.323 55.000 0.00 0.00 0.00 5.80
2725 6271 1.891919 GCCACAACAGCCAACGAGA 60.892 57.895 0.00 0.00 0.00 4.04
2773 6322 9.996554 AAAAGAAGAAAAAGGAGAAAGAAACAA 57.003 25.926 0.00 0.00 0.00 2.83
2871 6455 6.751514 ACATATAGCCACAACGATGAAAAA 57.248 33.333 0.00 0.00 0.00 1.94
2941 6552 8.160765 TGGGATTGTAACTATGACAAAAGAAGA 58.839 33.333 0.00 0.00 40.07 2.87
2942 6553 8.335532 TGGGATTGTAACTATGACAAAAGAAG 57.664 34.615 0.00 0.00 40.07 2.85
2943 6554 8.877864 ATGGGATTGTAACTATGACAAAAGAA 57.122 30.769 0.00 0.00 40.07 2.52
2944 6555 8.877864 AATGGGATTGTAACTATGACAAAAGA 57.122 30.769 0.00 0.00 40.07 2.52
2959 6573 5.129485 AGTTATGAGTCGAGAATGGGATTGT 59.871 40.000 0.00 0.00 0.00 2.71
2968 6582 8.092068 TGTTAAAATCCAGTTATGAGTCGAGAA 58.908 33.333 0.00 0.00 0.00 2.87
2969 6583 7.608153 TGTTAAAATCCAGTTATGAGTCGAGA 58.392 34.615 0.00 0.00 0.00 4.04
3002 6617 5.809001 TGAGGATGAACTTGCAACTTAGAT 58.191 37.500 0.00 0.00 0.00 1.98
3017 6632 3.432186 CCCTAGTTGCGATTTGAGGATGA 60.432 47.826 0.00 0.00 0.00 2.92
3078 6695 0.396974 AGTTGGGCCTCAGTTGCAAA 60.397 50.000 4.53 0.00 0.00 3.68
3102 6719 0.468029 AGTGAACTTGCAACAGGGGG 60.468 55.000 0.00 0.00 0.00 5.40
3106 6726 5.741388 AGTTAAGAGTGAACTTGCAACAG 57.259 39.130 0.00 0.00 33.25 3.16
3121 6741 1.001633 GGGCGTCCAGTCAAGTTAAGA 59.998 52.381 0.00 0.00 0.00 2.10
3124 6744 1.290955 CGGGCGTCCAGTCAAGTTA 59.709 57.895 6.96 0.00 0.00 2.24
3163 6783 3.426117 ATCGTCCGCCGGCAGTTAG 62.426 63.158 28.98 13.32 37.11 2.34
3164 6784 3.454573 ATCGTCCGCCGGCAGTTA 61.455 61.111 28.98 7.67 37.11 2.24
3176 6796 4.778143 ACCTTGGCCCGCATCGTC 62.778 66.667 0.00 0.00 0.00 4.20
3177 6797 4.778143 GACCTTGGCCCGCATCGT 62.778 66.667 0.00 0.00 0.00 3.73
3192 6812 4.459089 GGCCCTCAGGTCAGCGAC 62.459 72.222 0.00 0.79 37.86 5.19
3195 6815 4.459089 GACGGCCCTCAGGTCAGC 62.459 72.222 0.00 0.00 37.79 4.26
3196 6816 3.775654 GGACGGCCCTCAGGTCAG 61.776 72.222 0.00 0.00 37.79 3.51
3197 6817 4.316823 AGGACGGCCCTCAGGTCA 62.317 66.667 1.76 0.00 43.31 4.02
3210 6830 3.541713 CCTAGCGGCCCTGAGGAC 61.542 72.222 0.00 0.00 38.13 3.85
3223 6843 3.458163 TCCCGTTGAGCCGCCTAG 61.458 66.667 0.00 0.00 0.00 3.02
3224 6844 3.766691 GTCCCGTTGAGCCGCCTA 61.767 66.667 0.00 0.00 0.00 3.93
3230 6850 4.980805 TGTGCCGTCCCGTTGAGC 62.981 66.667 0.00 0.00 0.00 4.26
3231 6851 3.041940 GTGTGCCGTCCCGTTGAG 61.042 66.667 0.00 0.00 0.00 3.02
3232 6852 4.612412 GGTGTGCCGTCCCGTTGA 62.612 66.667 0.00 0.00 0.00 3.18
3233 6853 4.619227 AGGTGTGCCGTCCCGTTG 62.619 66.667 0.00 0.00 40.50 4.10
3234 6854 4.619227 CAGGTGTGCCGTCCCGTT 62.619 66.667 0.00 0.00 40.50 4.44
3236 6856 4.742201 CTCAGGTGTGCCGTCCCG 62.742 72.222 0.00 0.00 40.50 5.14
3237 6857 4.394712 CCTCAGGTGTGCCGTCCC 62.395 72.222 0.00 0.00 40.50 4.46
3238 6858 3.626924 ACCTCAGGTGTGCCGTCC 61.627 66.667 0.00 0.00 40.50 4.79
3265 6885 1.068127 ACGTTTTAGCACACTCCGAGT 59.932 47.619 0.00 0.00 0.00 4.18
3266 6886 1.455786 CACGTTTTAGCACACTCCGAG 59.544 52.381 0.00 0.00 0.00 4.63
3267 6887 1.493772 CACGTTTTAGCACACTCCGA 58.506 50.000 0.00 0.00 0.00 4.55
3268 6888 0.511221 CCACGTTTTAGCACACTCCG 59.489 55.000 0.00 0.00 0.00 4.63
3269 6889 1.798813 CTCCACGTTTTAGCACACTCC 59.201 52.381 0.00 0.00 0.00 3.85
3270 6890 2.750948 TCTCCACGTTTTAGCACACTC 58.249 47.619 0.00 0.00 0.00 3.51
3271 6891 2.902705 TCTCCACGTTTTAGCACACT 57.097 45.000 0.00 0.00 0.00 3.55
3272 6892 3.064207 TCATCTCCACGTTTTAGCACAC 58.936 45.455 0.00 0.00 0.00 3.82
3273 6893 3.006430 TCTCATCTCCACGTTTTAGCACA 59.994 43.478 0.00 0.00 0.00 4.57
3274 6894 3.368236 GTCTCATCTCCACGTTTTAGCAC 59.632 47.826 0.00 0.00 0.00 4.40
3275 6895 3.585862 GTCTCATCTCCACGTTTTAGCA 58.414 45.455 0.00 0.00 0.00 3.49
3276 6896 2.599082 CGTCTCATCTCCACGTTTTAGC 59.401 50.000 0.00 0.00 0.00 3.09
3277 6897 3.852536 GTCGTCTCATCTCCACGTTTTAG 59.147 47.826 0.00 0.00 35.05 1.85
3278 6898 3.504906 AGTCGTCTCATCTCCACGTTTTA 59.495 43.478 0.00 0.00 35.05 1.52
3279 6899 2.296471 AGTCGTCTCATCTCCACGTTTT 59.704 45.455 0.00 0.00 35.05 2.43
3280 6900 1.887198 AGTCGTCTCATCTCCACGTTT 59.113 47.619 0.00 0.00 35.05 3.60
3281 6901 1.200252 CAGTCGTCTCATCTCCACGTT 59.800 52.381 0.00 0.00 35.05 3.99
3282 6902 0.805614 CAGTCGTCTCATCTCCACGT 59.194 55.000 0.00 0.00 35.05 4.49
3283 6903 0.099613 CCAGTCGTCTCATCTCCACG 59.900 60.000 0.00 0.00 34.78 4.94
3284 6904 1.133407 GACCAGTCGTCTCATCTCCAC 59.867 57.143 0.00 0.00 38.57 4.02
3285 6905 1.464734 GACCAGTCGTCTCATCTCCA 58.535 55.000 0.00 0.00 38.57 3.86
3286 6906 0.378962 CGACCAGTCGTCTCATCTCC 59.621 60.000 11.94 0.00 46.99 3.71
3287 6907 3.907927 CGACCAGTCGTCTCATCTC 57.092 57.895 11.94 0.00 46.99 2.75
3297 6917 1.813786 AGCTACTTGTCTCGACCAGTC 59.186 52.381 7.02 0.00 38.18 3.51
3298 6918 1.912417 AGCTACTTGTCTCGACCAGT 58.088 50.000 8.56 8.56 40.03 4.00
3299 6919 3.271729 TCTAGCTACTTGTCTCGACCAG 58.728 50.000 0.00 0.00 0.00 4.00
3300 6920 3.345508 TCTAGCTACTTGTCTCGACCA 57.654 47.619 0.00 0.00 0.00 4.02
3301 6921 3.487879 GCTTCTAGCTACTTGTCTCGACC 60.488 52.174 0.00 0.00 38.45 4.79
3302 6922 3.687200 GCTTCTAGCTACTTGTCTCGAC 58.313 50.000 0.00 0.00 38.45 4.20
3303 6923 2.352034 CGCTTCTAGCTACTTGTCTCGA 59.648 50.000 0.00 0.00 39.60 4.04
3304 6924 2.710760 CGCTTCTAGCTACTTGTCTCG 58.289 52.381 0.00 0.00 39.60 4.04
3305 6925 2.456010 GCGCTTCTAGCTACTTGTCTC 58.544 52.381 0.00 0.00 39.60 3.36
3306 6926 1.202200 CGCGCTTCTAGCTACTTGTCT 60.202 52.381 5.56 0.00 39.60 3.41
3307 6927 1.192793 CGCGCTTCTAGCTACTTGTC 58.807 55.000 5.56 0.00 39.60 3.18
3308 6928 0.526662 ACGCGCTTCTAGCTACTTGT 59.473 50.000 5.73 0.00 39.60 3.16
3309 6929 2.110226 GTACGCGCTTCTAGCTACTTG 58.890 52.381 5.73 0.00 39.60 3.16
3310 6930 1.741706 TGTACGCGCTTCTAGCTACTT 59.258 47.619 5.73 0.00 39.60 2.24
3311 6931 1.376543 TGTACGCGCTTCTAGCTACT 58.623 50.000 5.73 0.00 39.60 2.57
3312 6932 2.402640 ATGTACGCGCTTCTAGCTAC 57.597 50.000 5.73 0.00 39.60 3.58
3313 6933 4.093998 GGTATATGTACGCGCTTCTAGCTA 59.906 45.833 5.73 0.00 39.60 3.32
3314 6934 3.119919 GGTATATGTACGCGCTTCTAGCT 60.120 47.826 5.73 0.00 39.60 3.32
3315 6935 3.169733 GGTATATGTACGCGCTTCTAGC 58.830 50.000 5.73 0.00 38.02 3.42
3316 6936 4.414999 TGGTATATGTACGCGCTTCTAG 57.585 45.455 5.73 0.00 0.00 2.43
3319 6939 4.985044 AAATGGTATATGTACGCGCTTC 57.015 40.909 5.73 0.00 0.00 3.86
3325 6945 9.496873 TGGAATTAGGAAAATGGTATATGTACG 57.503 33.333 0.00 0.00 0.00 3.67
3333 6953 8.050930 GGAAGTAGTGGAATTAGGAAAATGGTA 58.949 37.037 0.00 0.00 0.00 3.25
3334 6954 6.890268 GGAAGTAGTGGAATTAGGAAAATGGT 59.110 38.462 0.00 0.00 0.00 3.55
3335 6955 7.119387 AGGAAGTAGTGGAATTAGGAAAATGG 58.881 38.462 0.00 0.00 0.00 3.16
3336 6956 8.581253 AAGGAAGTAGTGGAATTAGGAAAATG 57.419 34.615 0.00 0.00 0.00 2.32
3338 6958 6.877322 CGAAGGAAGTAGTGGAATTAGGAAAA 59.123 38.462 0.00 0.00 0.00 2.29
3343 6963 5.811100 GGAACGAAGGAAGTAGTGGAATTAG 59.189 44.000 0.00 0.00 0.00 1.73
3348 6968 2.600790 TGGAACGAAGGAAGTAGTGGA 58.399 47.619 0.00 0.00 0.00 4.02
3349 6969 3.396260 TTGGAACGAAGGAAGTAGTGG 57.604 47.619 0.00 0.00 0.00 4.00
3350 6970 5.941948 AATTTGGAACGAAGGAAGTAGTG 57.058 39.130 0.00 0.00 0.00 2.74
3351 6971 6.766429 AGTAATTTGGAACGAAGGAAGTAGT 58.234 36.000 0.00 0.00 0.00 2.73
3352 6972 6.034683 CGAGTAATTTGGAACGAAGGAAGTAG 59.965 42.308 0.00 0.00 0.00 2.57
3353 6973 5.865552 CGAGTAATTTGGAACGAAGGAAGTA 59.134 40.000 0.00 0.00 0.00 2.24
3354 6974 4.689345 CGAGTAATTTGGAACGAAGGAAGT 59.311 41.667 0.00 0.00 0.00 3.01
3355 6975 4.689345 ACGAGTAATTTGGAACGAAGGAAG 59.311 41.667 0.00 0.00 0.00 3.46
3356 6976 4.634199 ACGAGTAATTTGGAACGAAGGAA 58.366 39.130 0.00 0.00 0.00 3.36
3357 6977 4.240096 GACGAGTAATTTGGAACGAAGGA 58.760 43.478 0.00 0.00 0.00 3.36
3358 6978 3.060363 CGACGAGTAATTTGGAACGAAGG 59.940 47.826 0.00 0.00 0.00 3.46
3359 6979 3.671928 ACGACGAGTAATTTGGAACGAAG 59.328 43.478 0.00 0.00 0.00 3.79
3360 6980 3.426191 CACGACGAGTAATTTGGAACGAA 59.574 43.478 0.00 0.00 0.00 3.85
3361 6981 2.981805 CACGACGAGTAATTTGGAACGA 59.018 45.455 0.00 0.00 0.00 3.85
3362 6982 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
3363 6983 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
3364 6984 3.061322 CACCACGACGAGTAATTTGGAA 58.939 45.455 0.00 0.00 0.00 3.53
3365 6985 2.296752 TCACCACGACGAGTAATTTGGA 59.703 45.455 0.00 0.00 0.00 3.53
3366 6986 2.679450 TCACCACGACGAGTAATTTGG 58.321 47.619 0.00 0.00 0.00 3.28
3367 6987 4.048820 GTTCACCACGACGAGTAATTTG 57.951 45.455 0.00 0.00 0.00 2.32
3380 7000 0.245813 GTACTCCCTCCGTTCACCAC 59.754 60.000 0.00 0.00 0.00 4.16
3381 7001 0.113776 AGTACTCCCTCCGTTCACCA 59.886 55.000 0.00 0.00 0.00 4.17
3382 7002 2.022934 CTAGTACTCCCTCCGTTCACC 58.977 57.143 0.00 0.00 0.00 4.02
3383 7003 2.996631 TCTAGTACTCCCTCCGTTCAC 58.003 52.381 0.00 0.00 0.00 3.18
3384 7004 3.947612 ATCTAGTACTCCCTCCGTTCA 57.052 47.619 0.00 0.00 0.00 3.18
3385 7005 6.002704 TGATAATCTAGTACTCCCTCCGTTC 58.997 44.000 0.00 0.00 0.00 3.95
3386 7006 5.769162 GTGATAATCTAGTACTCCCTCCGTT 59.231 44.000 0.00 0.00 0.00 4.44
3387 7007 5.315348 GTGATAATCTAGTACTCCCTCCGT 58.685 45.833 0.00 0.00 0.00 4.69
3388 7008 4.701171 GGTGATAATCTAGTACTCCCTCCG 59.299 50.000 0.00 0.00 0.00 4.63
3389 7009 5.018149 GGGTGATAATCTAGTACTCCCTCC 58.982 50.000 0.00 0.00 33.28 4.30
3390 7010 5.894653 AGGGTGATAATCTAGTACTCCCTC 58.105 45.833 0.00 0.00 39.43 4.30
3391 7011 5.952161 AGGGTGATAATCTAGTACTCCCT 57.048 43.478 0.00 2.55 39.01 4.20
3392 7012 6.015265 GTCAAGGGTGATAATCTAGTACTCCC 60.015 46.154 0.00 0.00 35.80 4.30
3393 7013 6.550108 TGTCAAGGGTGATAATCTAGTACTCC 59.450 42.308 0.00 0.00 35.80 3.85
3394 7014 7.285858 ACTGTCAAGGGTGATAATCTAGTACTC 59.714 40.741 0.00 0.00 35.80 2.59
3395 7015 7.068839 CACTGTCAAGGGTGATAATCTAGTACT 59.931 40.741 0.00 0.00 35.80 2.73
3396 7016 7.147880 ACACTGTCAAGGGTGATAATCTAGTAC 60.148 40.741 0.00 0.00 39.15 2.73
3397 7017 6.895756 ACACTGTCAAGGGTGATAATCTAGTA 59.104 38.462 0.00 0.00 39.15 1.82
3398 7018 5.721960 ACACTGTCAAGGGTGATAATCTAGT 59.278 40.000 0.00 0.00 39.15 2.57
3399 7019 6.227298 ACACTGTCAAGGGTGATAATCTAG 57.773 41.667 0.00 0.00 39.15 2.43
3409 7029 1.523711 CGCACACACTGTCAAGGGT 60.524 57.895 0.00 0.00 42.36 4.34
3410 7030 2.253758 CCGCACACACTGTCAAGGG 61.254 63.158 0.00 0.00 0.00 3.95
3411 7031 1.523711 ACCGCACACACTGTCAAGG 60.524 57.895 0.00 0.00 0.00 3.61
3412 7032 0.809636 TCACCGCACACACTGTCAAG 60.810 55.000 0.00 0.00 0.00 3.02
3413 7033 0.809636 CTCACCGCACACACTGTCAA 60.810 55.000 0.00 0.00 0.00 3.18
3414 7034 1.227234 CTCACCGCACACACTGTCA 60.227 57.895 0.00 0.00 0.00 3.58
3415 7035 1.956170 CCTCACCGCACACACTGTC 60.956 63.158 0.00 0.00 0.00 3.51
3416 7036 2.108976 CCTCACCGCACACACTGT 59.891 61.111 0.00 0.00 0.00 3.55
3417 7037 3.349006 GCCTCACCGCACACACTG 61.349 66.667 0.00 0.00 0.00 3.66
3418 7038 3.814615 CTGCCTCACCGCACACACT 62.815 63.158 0.00 0.00 34.35 3.55
3419 7039 3.349006 CTGCCTCACCGCACACAC 61.349 66.667 0.00 0.00 34.35 3.82
3420 7040 4.624364 CCTGCCTCACCGCACACA 62.624 66.667 0.00 0.00 34.35 3.72
3421 7041 4.314440 TCCTGCCTCACCGCACAC 62.314 66.667 0.00 0.00 34.35 3.82
3422 7042 4.007644 CTCCTGCCTCACCGCACA 62.008 66.667 0.00 0.00 34.35 4.57
3423 7043 4.767255 CCTCCTGCCTCACCGCAC 62.767 72.222 0.00 0.00 34.35 5.34
3425 7045 3.474570 ATCCTCCTGCCTCACCGC 61.475 66.667 0.00 0.00 0.00 5.68
3426 7046 1.406065 ATCATCCTCCTGCCTCACCG 61.406 60.000 0.00 0.00 0.00 4.94
3427 7047 0.396060 GATCATCCTCCTGCCTCACC 59.604 60.000 0.00 0.00 0.00 4.02
3428 7048 1.126488 TGATCATCCTCCTGCCTCAC 58.874 55.000 0.00 0.00 0.00 3.51
3429 7049 1.487976 GTTGATCATCCTCCTGCCTCA 59.512 52.381 0.00 0.00 0.00 3.86
3430 7050 1.202746 GGTTGATCATCCTCCTGCCTC 60.203 57.143 14.55 0.00 0.00 4.70
3431 7051 0.842635 GGTTGATCATCCTCCTGCCT 59.157 55.000 14.55 0.00 0.00 4.75
3432 7052 0.548031 TGGTTGATCATCCTCCTGCC 59.452 55.000 20.87 4.40 0.00 4.85
3433 7053 2.621998 CAATGGTTGATCATCCTCCTGC 59.378 50.000 20.87 0.00 0.00 4.85
3434 7054 3.894759 ACAATGGTTGATCATCCTCCTG 58.105 45.455 20.87 16.64 0.00 3.86
3435 7055 4.598036 AACAATGGTTGATCATCCTCCT 57.402 40.909 20.87 5.99 35.46 3.69
3457 7077 9.855361 CGATCACTGTCTCAAAAATATCATAAC 57.145 33.333 0.00 0.00 0.00 1.89
3458 7078 9.599866 ACGATCACTGTCTCAAAAATATCATAA 57.400 29.630 0.00 0.00 0.00 1.90
3460 7080 9.599866 TTACGATCACTGTCTCAAAAATATCAT 57.400 29.630 0.00 0.00 0.00 2.45
3461 7081 8.996024 TTACGATCACTGTCTCAAAAATATCA 57.004 30.769 0.00 0.00 0.00 2.15
3464 7084 8.175069 GCAATTACGATCACTGTCTCAAAAATA 58.825 33.333 0.00 0.00 0.00 1.40
3465 7085 7.023575 GCAATTACGATCACTGTCTCAAAAAT 58.976 34.615 0.00 0.00 0.00 1.82
3466 7086 6.204688 AGCAATTACGATCACTGTCTCAAAAA 59.795 34.615 0.00 0.00 0.00 1.94
3467 7087 5.700832 AGCAATTACGATCACTGTCTCAAAA 59.299 36.000 0.00 0.00 0.00 2.44
3468 7088 5.237815 AGCAATTACGATCACTGTCTCAAA 58.762 37.500 0.00 0.00 0.00 2.69
3469 7089 4.820897 AGCAATTACGATCACTGTCTCAA 58.179 39.130 0.00 0.00 0.00 3.02
3470 7090 4.424626 GAGCAATTACGATCACTGTCTCA 58.575 43.478 0.00 0.00 0.00 3.27
3471 7091 3.799420 GGAGCAATTACGATCACTGTCTC 59.201 47.826 0.00 0.00 0.00 3.36
3472 7092 3.195610 TGGAGCAATTACGATCACTGTCT 59.804 43.478 0.00 0.00 0.00 3.41
3473 7093 3.307242 GTGGAGCAATTACGATCACTGTC 59.693 47.826 0.00 0.00 0.00 3.51
3474 7094 3.055819 AGTGGAGCAATTACGATCACTGT 60.056 43.478 0.00 0.00 0.00 3.55
3475 7095 3.525537 AGTGGAGCAATTACGATCACTG 58.474 45.455 0.00 0.00 0.00 3.66
3476 7096 3.195610 TGAGTGGAGCAATTACGATCACT 59.804 43.478 0.00 0.00 0.00 3.41
3477 7097 3.521560 TGAGTGGAGCAATTACGATCAC 58.478 45.455 0.00 0.00 0.00 3.06
3478 7098 3.430790 CCTGAGTGGAGCAATTACGATCA 60.431 47.826 0.00 0.00 38.35 2.92
3479 7099 3.126831 CCTGAGTGGAGCAATTACGATC 58.873 50.000 0.00 0.00 38.35 3.69
3480 7100 2.158900 CCCTGAGTGGAGCAATTACGAT 60.159 50.000 0.00 0.00 38.35 3.73
3481 7101 1.207089 CCCTGAGTGGAGCAATTACGA 59.793 52.381 0.00 0.00 38.35 3.43
3482 7102 1.656652 CCCTGAGTGGAGCAATTACG 58.343 55.000 0.00 0.00 38.35 3.18
3483 7103 1.340017 TGCCCTGAGTGGAGCAATTAC 60.340 52.381 0.00 0.00 38.46 1.89
3484 7104 0.991146 TGCCCTGAGTGGAGCAATTA 59.009 50.000 0.00 0.00 38.46 1.40
3485 7105 0.112995 TTGCCCTGAGTGGAGCAATT 59.887 50.000 0.00 0.00 42.69 2.32
3486 7106 1.769665 TTGCCCTGAGTGGAGCAAT 59.230 52.632 0.00 0.00 42.69 3.56
3487 7107 3.249805 TTGCCCTGAGTGGAGCAA 58.750 55.556 0.00 0.00 44.14 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.