Multiple sequence alignment - TraesCS4A01G251900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G251900 chr4A 100.000 3594 0 0 1 3594 563676948 563680541 0.000000e+00 6637.0
1 TraesCS4A01G251900 chr4A 93.258 178 11 1 731 908 518118293 518118117 9.900000e-66 261.0
2 TraesCS4A01G251900 chr4D 96.448 1830 44 5 910 2725 37609133 37610955 0.000000e+00 3000.0
3 TraesCS4A01G251900 chr4D 90.495 505 35 4 169 671 37608363 37608856 0.000000e+00 654.0
4 TraesCS4A01G251900 chr4B 96.329 1825 57 6 910 2725 54863042 54864865 0.000000e+00 2990.0
5 TraesCS4A01G251900 chr4B 85.275 618 87 3 2979 3594 54889887 54890502 5.060000e-178 634.0
6 TraesCS4A01G251900 chr4B 82.024 573 57 18 175 729 54861979 54862523 2.550000e-121 446.0
7 TraesCS4A01G251900 chr7B 81.615 1387 241 10 1209 2594 586245914 586244541 0.000000e+00 1136.0
8 TraesCS4A01G251900 chr7B 91.848 184 15 0 731 914 149849625 149849442 1.280000e-64 257.0
9 TraesCS4A01G251900 chr7A 79.323 1625 297 26 992 2594 624961262 624959655 0.000000e+00 1103.0
10 TraesCS4A01G251900 chr7A 92.222 180 13 1 733 911 555478324 555478145 1.660000e-63 254.0
11 TraesCS4A01G251900 chr7D 79.083 1635 293 36 992 2594 542980583 542978966 0.000000e+00 1079.0
12 TraesCS4A01G251900 chr7D 82.182 275 44 3 1297 1567 543006955 543006682 7.760000e-57 231.0
13 TraesCS4A01G251900 chr5A 95.506 178 8 0 731 908 553144253 553144076 5.870000e-73 285.0
14 TraesCS4A01G251900 chr3A 94.915 177 9 0 731 907 57085248 57085072 9.830000e-71 278.0
15 TraesCS4A01G251900 chr3A 92.513 187 13 1 726 911 102875838 102875652 2.130000e-67 267.0
16 TraesCS4A01G251900 chr3A 92.222 180 11 3 735 912 108744127 108743949 5.960000e-63 252.0
17 TraesCS4A01G251900 chr3A 87.500 128 15 1 26 152 430489648 430489775 2.890000e-31 147.0
18 TraesCS4A01G251900 chr6A 93.182 176 11 1 731 905 77775600 77775775 1.280000e-64 257.0
19 TraesCS4A01G251900 chr6A 95.370 108 5 0 36 143 559431628 559431735 4.770000e-39 172.0
20 TraesCS4A01G251900 chr6A 84.483 58 8 1 2990 3047 7369420 7369476 5.010000e-04 56.5
21 TraesCS4A01G251900 chr1A 92.135 178 14 0 731 908 535439181 535439004 5.960000e-63 252.0
22 TraesCS4A01G251900 chr1A 98.148 108 2 0 36 143 577474630 577474737 4.740000e-44 189.0
23 TraesCS4A01G251900 chr1A 96.396 111 4 0 34 144 548413984 548414094 2.200000e-42 183.0
24 TraesCS4A01G251900 chr1A 94.737 114 4 2 37 148 53034586 53034699 3.690000e-40 176.0
25 TraesCS4A01G251900 chr3B 96.581 117 3 1 36 152 785320840 785320725 3.660000e-45 193.0
26 TraesCS4A01G251900 chr3B 95.455 110 5 0 34 143 702843485 702843594 3.690000e-40 176.0
27 TraesCS4A01G251900 chr2B 98.148 108 2 0 36 143 550191560 550191667 4.740000e-44 189.0
28 TraesCS4A01G251900 chr5B 97.196 107 3 0 37 143 549710997 549711103 7.930000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G251900 chr4A 563676948 563680541 3593 False 6637 6637 100.0000 1 3594 1 chr4A.!!$F1 3593
1 TraesCS4A01G251900 chr4D 37608363 37610955 2592 False 1827 3000 93.4715 169 2725 2 chr4D.!!$F1 2556
2 TraesCS4A01G251900 chr4B 54861979 54864865 2886 False 1718 2990 89.1765 175 2725 2 chr4B.!!$F2 2550
3 TraesCS4A01G251900 chr4B 54889887 54890502 615 False 634 634 85.2750 2979 3594 1 chr4B.!!$F1 615
4 TraesCS4A01G251900 chr7B 586244541 586245914 1373 True 1136 1136 81.6150 1209 2594 1 chr7B.!!$R2 1385
5 TraesCS4A01G251900 chr7A 624959655 624961262 1607 True 1103 1103 79.3230 992 2594 1 chr7A.!!$R2 1602
6 TraesCS4A01G251900 chr7D 542978966 542980583 1617 True 1079 1079 79.0830 992 2594 1 chr7D.!!$R1 1602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.164647 GCTACTTTGCACGCTGTCTG 59.835 55.000 0.0 0.0 0.0 3.51 F
227 228 1.066716 TCTAACCGTCCATTCCAACCG 60.067 52.381 0.0 0.0 0.0 4.44 F
1966 2490 0.888619 AGCTGATCTTTCGACCGTCA 59.111 50.000 0.0 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1885 2409 1.339151 ACCCGCTTGATCTCCTCAAAC 60.339 52.381 0.00 0.00 43.20 2.93 R
2122 2646 0.101579 TGAAGCACGTCTTGACGACA 59.898 50.000 26.65 15.24 42.98 4.35 R
2829 3353 0.109086 CGCGGACATATAGGAGGCAG 60.109 60.000 0.00 0.00 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.691661 TGGAATATATTCTTTTTGCTACTCCC 57.308 34.615 21.80 4.68 37.00 4.30
43 44 8.502738 TGGAATATATTCTTTTTGCTACTCCCT 58.497 33.333 21.80 0.00 37.00 4.20
44 45 9.004717 GGAATATATTCTTTTTGCTACTCCCTC 57.995 37.037 21.80 0.00 37.00 4.30
45 46 8.926092 AATATATTCTTTTTGCTACTCCCTCC 57.074 34.615 0.00 0.00 0.00 4.30
46 47 2.762535 TCTTTTTGCTACTCCCTCCG 57.237 50.000 0.00 0.00 0.00 4.63
47 48 1.975680 TCTTTTTGCTACTCCCTCCGT 59.024 47.619 0.00 0.00 0.00 4.69
48 49 2.370849 TCTTTTTGCTACTCCCTCCGTT 59.629 45.455 0.00 0.00 0.00 4.44
49 50 2.467566 TTTTGCTACTCCCTCCGTTC 57.532 50.000 0.00 0.00 0.00 3.95
50 51 1.344065 TTTGCTACTCCCTCCGTTCA 58.656 50.000 0.00 0.00 0.00 3.18
51 52 0.606604 TTGCTACTCCCTCCGTTCAC 59.393 55.000 0.00 0.00 0.00 3.18
52 53 0.251653 TGCTACTCCCTCCGTTCACT 60.252 55.000 0.00 0.00 0.00 3.41
53 54 0.896226 GCTACTCCCTCCGTTCACTT 59.104 55.000 0.00 0.00 0.00 3.16
54 55 1.275573 GCTACTCCCTCCGTTCACTTT 59.724 52.381 0.00 0.00 0.00 2.66
55 56 2.289506 GCTACTCCCTCCGTTCACTTTT 60.290 50.000 0.00 0.00 0.00 2.27
56 57 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
57 58 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
58 59 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
59 60 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
60 61 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
61 62 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
62 63 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
63 64 4.124238 CCTCCGTTCACTTTTGTAAGTCA 58.876 43.478 0.00 0.00 42.67 3.41
64 65 4.755123 CCTCCGTTCACTTTTGTAAGTCAT 59.245 41.667 0.00 0.00 42.67 3.06
65 66 5.238650 CCTCCGTTCACTTTTGTAAGTCATT 59.761 40.000 0.00 0.00 42.67 2.57
66 67 6.238648 CCTCCGTTCACTTTTGTAAGTCATTT 60.239 38.462 0.00 0.00 42.67 2.32
67 68 6.721321 TCCGTTCACTTTTGTAAGTCATTTC 58.279 36.000 0.00 0.00 42.67 2.17
68 69 6.316640 TCCGTTCACTTTTGTAAGTCATTTCA 59.683 34.615 0.00 0.00 42.67 2.69
69 70 6.632834 CCGTTCACTTTTGTAAGTCATTTCAG 59.367 38.462 0.00 0.00 42.67 3.02
70 71 7.406553 CGTTCACTTTTGTAAGTCATTTCAGA 58.593 34.615 0.00 0.00 42.67 3.27
71 72 7.373441 CGTTCACTTTTGTAAGTCATTTCAGAC 59.627 37.037 0.00 0.00 42.67 3.51
72 73 7.857734 TCACTTTTGTAAGTCATTTCAGACA 57.142 32.000 0.00 0.00 42.67 3.41
73 74 8.275015 TCACTTTTGTAAGTCATTTCAGACAA 57.725 30.769 0.00 0.00 42.67 3.18
74 75 8.902806 TCACTTTTGTAAGTCATTTCAGACAAT 58.097 29.630 0.00 0.00 42.67 2.71
75 76 9.520204 CACTTTTGTAAGTCATTTCAGACAATT 57.480 29.630 0.00 0.00 42.67 2.32
76 77 9.520204 ACTTTTGTAAGTCATTTCAGACAATTG 57.480 29.630 3.24 3.24 40.60 2.32
77 78 9.734620 CTTTTGTAAGTCATTTCAGACAATTGA 57.265 29.630 13.59 0.00 40.98 2.57
84 85 9.918630 AAGTCATTTCAGACAATTGAAAATAGG 57.081 29.630 13.59 2.94 46.63 2.57
85 86 8.031277 AGTCATTTCAGACAATTGAAAATAGGC 58.969 33.333 13.59 8.53 46.63 3.93
86 87 8.031277 GTCATTTCAGACAATTGAAAATAGGCT 58.969 33.333 13.59 0.00 46.63 4.58
87 88 9.241919 TCATTTCAGACAATTGAAAATAGGCTA 57.758 29.630 13.59 0.00 46.63 3.93
88 89 9.294030 CATTTCAGACAATTGAAAATAGGCTAC 57.706 33.333 13.59 0.00 46.63 3.58
89 90 8.635765 TTTCAGACAATTGAAAATAGGCTACT 57.364 30.769 13.59 0.00 42.39 2.57
90 91 8.635765 TTCAGACAATTGAAAATAGGCTACTT 57.364 30.769 13.59 0.00 34.32 2.24
91 92 8.635765 TCAGACAATTGAAAATAGGCTACTTT 57.364 30.769 13.59 0.00 0.00 2.66
92 93 8.514594 TCAGACAATTGAAAATAGGCTACTTTG 58.485 33.333 13.59 0.00 0.00 2.77
93 94 7.274250 CAGACAATTGAAAATAGGCTACTTTGC 59.726 37.037 13.59 3.58 0.00 3.68
94 95 6.991938 ACAATTGAAAATAGGCTACTTTGCA 58.008 32.000 13.59 5.96 34.04 4.08
95 96 6.868339 ACAATTGAAAATAGGCTACTTTGCAC 59.132 34.615 13.59 0.00 34.04 4.57
96 97 4.678509 TGAAAATAGGCTACTTTGCACG 57.321 40.909 5.59 0.00 34.04 5.34
97 98 3.119990 TGAAAATAGGCTACTTTGCACGC 60.120 43.478 5.59 0.00 34.04 5.34
98 99 2.403252 AATAGGCTACTTTGCACGCT 57.597 45.000 0.00 0.00 34.04 5.07
99 100 1.656652 ATAGGCTACTTTGCACGCTG 58.343 50.000 0.00 0.00 34.04 5.18
100 101 0.320374 TAGGCTACTTTGCACGCTGT 59.680 50.000 0.00 0.00 34.04 4.40
101 102 0.951040 AGGCTACTTTGCACGCTGTC 60.951 55.000 0.00 0.00 34.04 3.51
102 103 0.951040 GGCTACTTTGCACGCTGTCT 60.951 55.000 0.00 0.00 34.04 3.41
103 104 0.164647 GCTACTTTGCACGCTGTCTG 59.835 55.000 0.00 0.00 0.00 3.51
104 105 1.783284 CTACTTTGCACGCTGTCTGA 58.217 50.000 0.00 0.00 0.00 3.27
105 106 2.135139 CTACTTTGCACGCTGTCTGAA 58.865 47.619 0.00 0.00 0.00 3.02
106 107 1.378531 ACTTTGCACGCTGTCTGAAA 58.621 45.000 0.00 0.00 0.00 2.69
107 108 1.949525 ACTTTGCACGCTGTCTGAAAT 59.050 42.857 0.00 0.00 0.00 2.17
108 109 2.358898 ACTTTGCACGCTGTCTGAAATT 59.641 40.909 0.00 0.00 0.00 1.82
109 110 2.686558 TTGCACGCTGTCTGAAATTC 57.313 45.000 0.00 0.00 0.00 2.17
110 111 1.882912 TGCACGCTGTCTGAAATTCT 58.117 45.000 0.00 0.00 0.00 2.40
111 112 2.221169 TGCACGCTGTCTGAAATTCTT 58.779 42.857 0.00 0.00 0.00 2.52
112 113 2.224079 TGCACGCTGTCTGAAATTCTTC 59.776 45.455 0.00 0.00 0.00 2.87
113 114 2.224079 GCACGCTGTCTGAAATTCTTCA 59.776 45.455 0.00 0.00 39.30 3.02
114 115 3.303990 GCACGCTGTCTGAAATTCTTCAA 60.304 43.478 0.00 0.00 41.05 2.69
115 116 4.214437 CACGCTGTCTGAAATTCTTCAAC 58.786 43.478 0.00 0.00 41.05 3.18
116 117 3.059597 ACGCTGTCTGAAATTCTTCAACG 60.060 43.478 0.00 1.64 41.05 4.10
117 118 3.229552 GCTGTCTGAAATTCTTCAACGC 58.770 45.455 0.00 0.00 41.05 4.84
118 119 3.814945 CTGTCTGAAATTCTTCAACGCC 58.185 45.455 0.00 0.00 41.05 5.68
119 120 3.476552 TGTCTGAAATTCTTCAACGCCT 58.523 40.909 0.00 0.00 41.05 5.52
120 121 3.882888 TGTCTGAAATTCTTCAACGCCTT 59.117 39.130 0.00 0.00 41.05 4.35
121 122 5.060506 TGTCTGAAATTCTTCAACGCCTTA 58.939 37.500 0.00 0.00 41.05 2.69
122 123 5.705441 TGTCTGAAATTCTTCAACGCCTTAT 59.295 36.000 0.00 0.00 41.05 1.73
123 124 6.876789 TGTCTGAAATTCTTCAACGCCTTATA 59.123 34.615 0.00 0.00 41.05 0.98
124 125 7.389330 TGTCTGAAATTCTTCAACGCCTTATAA 59.611 33.333 0.00 0.00 41.05 0.98
125 126 8.234546 GTCTGAAATTCTTCAACGCCTTATAAA 58.765 33.333 0.00 0.00 41.05 1.40
126 127 8.788806 TCTGAAATTCTTCAACGCCTTATAAAA 58.211 29.630 0.00 0.00 41.05 1.52
127 128 9.405587 CTGAAATTCTTCAACGCCTTATAAAAA 57.594 29.630 0.00 0.00 41.05 1.94
128 129 9.921637 TGAAATTCTTCAACGCCTTATAAAAAT 57.078 25.926 0.00 0.00 38.65 1.82
130 131 9.921637 AAATTCTTCAACGCCTTATAAAAATGA 57.078 25.926 0.00 0.00 0.00 2.57
131 132 9.921637 AATTCTTCAACGCCTTATAAAAATGAA 57.078 25.926 0.00 0.00 0.00 2.57
132 133 8.736751 TTCTTCAACGCCTTATAAAAATGAAC 57.263 30.769 0.00 0.00 0.00 3.18
133 134 7.877003 TCTTCAACGCCTTATAAAAATGAACA 58.123 30.769 0.00 0.00 0.00 3.18
134 135 8.020819 TCTTCAACGCCTTATAAAAATGAACAG 58.979 33.333 0.00 0.00 0.00 3.16
135 136 7.441890 TCAACGCCTTATAAAAATGAACAGA 57.558 32.000 0.00 0.00 0.00 3.41
136 137 7.526608 TCAACGCCTTATAAAAATGAACAGAG 58.473 34.615 0.00 0.00 0.00 3.35
137 138 6.436843 ACGCCTTATAAAAATGAACAGAGG 57.563 37.500 0.00 0.00 0.00 3.69
138 139 5.357032 ACGCCTTATAAAAATGAACAGAGGG 59.643 40.000 0.00 0.00 0.00 4.30
139 140 5.588648 CGCCTTATAAAAATGAACAGAGGGA 59.411 40.000 0.00 0.00 0.00 4.20
140 141 6.238484 CGCCTTATAAAAATGAACAGAGGGAG 60.238 42.308 0.00 0.00 0.00 4.30
141 142 6.603599 GCCTTATAAAAATGAACAGAGGGAGT 59.396 38.462 0.00 0.00 0.00 3.85
142 143 7.773690 GCCTTATAAAAATGAACAGAGGGAGTA 59.226 37.037 0.00 0.00 0.00 2.59
143 144 9.110502 CCTTATAAAAATGAACAGAGGGAGTAC 57.889 37.037 0.00 0.00 0.00 2.73
144 145 9.667107 CTTATAAAAATGAACAGAGGGAGTACA 57.333 33.333 0.00 0.00 0.00 2.90
147 148 7.839680 AAAAATGAACAGAGGGAGTACATTT 57.160 32.000 0.00 0.00 37.84 2.32
148 149 8.934023 AAAAATGAACAGAGGGAGTACATTTA 57.066 30.769 0.00 0.00 36.11 1.40
149 150 9.533831 AAAAATGAACAGAGGGAGTACATTTAT 57.466 29.630 0.00 0.00 36.11 1.40
150 151 9.533831 AAAATGAACAGAGGGAGTACATTTATT 57.466 29.630 0.00 0.00 36.11 1.40
151 152 9.533831 AAATGAACAGAGGGAGTACATTTATTT 57.466 29.630 0.00 0.00 35.64 1.40
152 153 9.533831 AATGAACAGAGGGAGTACATTTATTTT 57.466 29.630 0.00 0.00 0.00 1.82
154 155 9.444600 TGAACAGAGGGAGTACATTTATTTTAC 57.555 33.333 0.00 0.00 0.00 2.01
155 156 8.803397 AACAGAGGGAGTACATTTATTTTACC 57.197 34.615 0.00 0.00 0.00 2.85
156 157 7.344134 ACAGAGGGAGTACATTTATTTTACCC 58.656 38.462 0.00 0.00 35.53 3.69
157 158 6.771267 CAGAGGGAGTACATTTATTTTACCCC 59.229 42.308 0.00 0.00 35.87 4.95
158 159 6.681541 AGAGGGAGTACATTTATTTTACCCCT 59.318 38.462 0.00 0.00 38.36 4.79
159 160 7.853003 AGAGGGAGTACATTTATTTTACCCCTA 59.147 37.037 0.00 0.00 37.00 3.53
160 161 8.591526 AGGGAGTACATTTATTTTACCCCTAT 57.408 34.615 0.00 0.00 36.00 2.57
161 162 9.693327 AGGGAGTACATTTATTTTACCCCTATA 57.307 33.333 0.00 0.00 36.00 1.31
162 163 9.730705 GGGAGTACATTTATTTTACCCCTATAC 57.269 37.037 0.00 0.00 0.00 1.47
172 173 6.813293 TTTTACCCCTATACACTACTTCCC 57.187 41.667 0.00 0.00 0.00 3.97
173 174 2.954792 ACCCCTATACACTACTTCCCG 58.045 52.381 0.00 0.00 0.00 5.14
195 196 3.760787 GCCCTAGGTATGTTATCCCCTCA 60.761 52.174 8.29 0.00 0.00 3.86
210 211 3.272285 TCCCCTCACTTCTCTCCATTCTA 59.728 47.826 0.00 0.00 0.00 2.10
214 215 4.440802 CCTCACTTCTCTCCATTCTAACCG 60.441 50.000 0.00 0.00 0.00 4.44
227 228 1.066716 TCTAACCGTCCATTCCAACCG 60.067 52.381 0.00 0.00 0.00 4.44
254 255 6.430000 TCTCTATGCTTTTTCCACTGGTTTAC 59.570 38.462 0.00 0.00 0.00 2.01
262 263 3.981071 TCCACTGGTTTACCATGAGAG 57.019 47.619 1.37 0.00 46.46 3.20
371 373 6.806739 TCATAGTGATTGTGTAGACAAAGTCG 59.193 38.462 9.76 0.00 45.23 4.18
388 390 4.955925 AGTCGTCACAATTTGAACACAA 57.044 36.364 2.79 0.00 35.39 3.33
398 401 9.676195 TCACAATTTGAACACAATATGTACAAG 57.324 29.630 0.00 0.00 42.31 3.16
432 435 5.524281 TGCAATTCGCGACCTAACATATTAA 59.476 36.000 9.15 0.00 46.97 1.40
461 464 7.835634 TTTATATCTATGTTGCAACACACGA 57.164 32.000 33.29 26.54 42.51 4.35
473 476 6.978024 TGCAACACACGAACAATTATTTAC 57.022 33.333 0.00 0.00 0.00 2.01
480 483 6.035220 CACACGAACAATTATTTACTAGCCGA 59.965 38.462 0.00 0.00 0.00 5.54
482 485 7.117454 CACGAACAATTATTTACTAGCCGAAG 58.883 38.462 0.00 0.00 0.00 3.79
535 538 8.331931 AGTTGGACCAGATGGATAGTTTTATA 57.668 34.615 5.72 0.00 38.94 0.98
627 632 3.149981 TCTCTGTGCGGACTATCCATAG 58.850 50.000 8.99 0.00 35.91 2.23
671 676 4.062293 GCACTACATTGTGTGGTACTTCA 58.938 43.478 16.04 0.00 40.18 3.02
677 782 3.866703 TTGTGTGGTACTTCATGGGAA 57.133 42.857 0.00 0.00 0.00 3.97
688 793 7.780745 TGGTACTTCATGGGAACTTTTAAAAGA 59.219 33.333 29.97 11.18 39.31 2.52
689 794 8.080417 GGTACTTCATGGGAACTTTTAAAAGAC 58.920 37.037 29.97 21.87 39.31 3.01
690 795 7.050970 ACTTCATGGGAACTTTTAAAAGACC 57.949 36.000 29.97 27.33 39.31 3.85
691 796 6.041637 ACTTCATGGGAACTTTTAAAAGACCC 59.958 38.462 34.05 34.05 45.93 4.46
732 837 9.642327 CAATCAATCAGACAATATTTTTGTGGA 57.358 29.630 0.00 0.00 31.96 4.02
735 840 9.859427 TCAATCAGACAATATTTTTGTGGAATC 57.141 29.630 0.00 0.00 31.96 2.52
736 841 9.642327 CAATCAGACAATATTTTTGTGGAATCA 57.358 29.630 0.00 0.00 31.96 2.57
753 858 6.284891 GGAATCAATCCTTCACATTTTGGA 57.715 37.500 0.00 0.00 45.56 3.53
812 917 9.812347 AATTCCTATCCTATGCATTAAATGACA 57.188 29.630 3.54 0.00 0.00 3.58
813 918 9.986157 ATTCCTATCCTATGCATTAAATGACAT 57.014 29.630 3.54 0.00 33.67 3.06
814 919 9.453572 TTCCTATCCTATGCATTAAATGACATC 57.546 33.333 3.54 0.00 32.25 3.06
815 920 8.829746 TCCTATCCTATGCATTAAATGACATCT 58.170 33.333 3.54 0.00 32.25 2.90
816 921 9.107177 CCTATCCTATGCATTAAATGACATCTC 57.893 37.037 3.54 0.00 32.25 2.75
817 922 9.887629 CTATCCTATGCATTAAATGACATCTCT 57.112 33.333 3.54 0.00 32.25 3.10
819 924 8.985315 TCCTATGCATTAAATGACATCTCTTT 57.015 30.769 3.54 0.00 32.25 2.52
820 925 9.060347 TCCTATGCATTAAATGACATCTCTTTC 57.940 33.333 3.54 0.00 32.25 2.62
839 944 9.553064 TCTCTTTCTTTATAGGAATTGAGATGC 57.447 33.333 13.18 0.00 32.93 3.91
841 946 9.857656 TCTTTCTTTATAGGAATTGAGATGCAT 57.142 29.630 0.00 0.00 0.00 3.96
842 947 9.894783 CTTTCTTTATAGGAATTGAGATGCATG 57.105 33.333 2.46 0.00 0.00 4.06
843 948 8.985315 TTCTTTATAGGAATTGAGATGCATGT 57.015 30.769 2.46 0.00 0.00 3.21
844 949 8.613060 TCTTTATAGGAATTGAGATGCATGTC 57.387 34.615 16.63 16.63 0.00 3.06
845 950 8.212995 TCTTTATAGGAATTGAGATGCATGTCA 58.787 33.333 21.70 21.70 0.00 3.58
846 951 8.929260 TTTATAGGAATTGAGATGCATGTCAT 57.071 30.769 25.41 13.07 38.32 3.06
860 965 8.599055 GATGCATGTCATCTTACTTCTTATGA 57.401 34.615 2.46 0.00 46.29 2.15
861 966 9.217278 GATGCATGTCATCTTACTTCTTATGAT 57.783 33.333 2.46 0.00 46.29 2.45
863 968 9.399797 TGCATGTCATCTTACTTCTTATGATTT 57.600 29.630 0.00 0.00 31.49 2.17
906 1011 6.827727 TCTATTCTATGAACCAAAGTAGGCC 58.172 40.000 0.00 0.00 0.00 5.19
907 1012 5.717119 ATTCTATGAACCAAAGTAGGCCT 57.283 39.130 11.78 11.78 0.00 5.19
955 1402 6.437094 GGCTAAACCTCTACACTATACTTCG 58.563 44.000 0.00 0.00 34.51 3.79
956 1403 6.261826 GGCTAAACCTCTACACTATACTTCGA 59.738 42.308 0.00 0.00 34.51 3.71
957 1404 7.354257 GCTAAACCTCTACACTATACTTCGAG 58.646 42.308 0.00 0.00 0.00 4.04
958 1405 5.754543 AACCTCTACACTATACTTCGAGC 57.245 43.478 0.00 0.00 0.00 5.03
959 1406 4.136051 ACCTCTACACTATACTTCGAGCC 58.864 47.826 0.00 0.00 0.00 4.70
1155 1627 1.968540 GCGCCCAAACTCTGCTTCT 60.969 57.895 0.00 0.00 0.00 2.85
1165 1637 3.851976 ACTCTGCTTCTTGGTACGTAG 57.148 47.619 0.00 0.00 0.00 3.51
1675 2199 2.581354 GTCGGCATCCTGCTCAGT 59.419 61.111 0.00 0.00 44.28 3.41
1933 2457 2.731348 CCGCGAGAAGCCGATAGC 60.731 66.667 8.23 0.00 44.76 2.97
1966 2490 0.888619 AGCTGATCTTTCGACCGTCA 59.111 50.000 0.00 0.00 0.00 4.35
1987 2511 2.768344 ATGGTCCGGCGGATCCTT 60.768 61.111 34.36 26.81 30.39 3.36
2161 2685 1.531423 TACTCGTGGTCTCGCTCTTT 58.469 50.000 0.00 0.00 0.00 2.52
2498 3022 1.508632 GTGCTTCTTTCTGTACGCCA 58.491 50.000 0.00 0.00 0.00 5.69
2536 3060 2.853914 GTGTTCGTCTTCCTGCGC 59.146 61.111 0.00 0.00 0.00 6.09
2596 3120 5.106317 GGACGTGCTCTTTTCCAAATGATTA 60.106 40.000 0.00 0.00 0.00 1.75
2671 3195 3.065648 GCACGTTTGGTAGAAACCTTTGA 59.934 43.478 0.00 0.00 46.91 2.69
2715 3239 3.667360 TGTGATTGCATCATCGATAGGG 58.333 45.455 0.00 0.00 42.04 3.53
2725 3249 7.167535 TGCATCATCGATAGGGATCAATAAAA 58.832 34.615 0.00 0.00 31.78 1.52
2726 3250 7.335171 TGCATCATCGATAGGGATCAATAAAAG 59.665 37.037 0.00 0.00 31.78 2.27
2727 3251 7.201679 GCATCATCGATAGGGATCAATAAAAGG 60.202 40.741 0.00 0.00 31.78 3.11
2728 3252 6.173339 TCATCGATAGGGATCAATAAAAGGC 58.827 40.000 0.00 0.00 31.78 4.35
2729 3253 5.825593 TCGATAGGGATCAATAAAAGGCT 57.174 39.130 0.00 0.00 31.78 4.58
2730 3254 6.187727 TCGATAGGGATCAATAAAAGGCTT 57.812 37.500 0.00 0.00 31.78 4.35
2731 3255 6.231211 TCGATAGGGATCAATAAAAGGCTTC 58.769 40.000 0.00 0.00 31.78 3.86
2732 3256 6.043243 TCGATAGGGATCAATAAAAGGCTTCT 59.957 38.462 0.00 0.00 31.78 2.85
2733 3257 7.234782 TCGATAGGGATCAATAAAAGGCTTCTA 59.765 37.037 0.00 0.00 31.78 2.10
2734 3258 7.332182 CGATAGGGATCAATAAAAGGCTTCTAC 59.668 40.741 0.00 0.00 31.78 2.59
2735 3259 6.582929 AGGGATCAATAAAAGGCTTCTACT 57.417 37.500 0.00 0.00 0.00 2.57
2736 3260 6.596621 AGGGATCAATAAAAGGCTTCTACTC 58.403 40.000 0.00 0.00 0.00 2.59
2737 3261 5.765677 GGGATCAATAAAAGGCTTCTACTCC 59.234 44.000 0.00 1.23 0.00 3.85
2738 3262 6.409810 GGGATCAATAAAAGGCTTCTACTCCT 60.410 42.308 0.00 0.00 0.00 3.69
2739 3263 6.708502 GGATCAATAAAAGGCTTCTACTCCTC 59.291 42.308 0.00 0.00 0.00 3.71
2740 3264 5.661458 TCAATAAAAGGCTTCTACTCCTCG 58.339 41.667 0.00 0.00 0.00 4.63
2741 3265 5.421056 TCAATAAAAGGCTTCTACTCCTCGA 59.579 40.000 0.00 0.00 0.00 4.04
2742 3266 5.934402 ATAAAAGGCTTCTACTCCTCGAA 57.066 39.130 0.00 0.00 0.00 3.71
2743 3267 4.828072 AAAAGGCTTCTACTCCTCGAAT 57.172 40.909 0.00 0.00 0.00 3.34
2744 3268 3.810310 AAGGCTTCTACTCCTCGAATG 57.190 47.619 0.00 0.00 0.00 2.67
2745 3269 2.035632 AGGCTTCTACTCCTCGAATGG 58.964 52.381 0.00 0.00 0.00 3.16
2746 3270 2.032620 GGCTTCTACTCCTCGAATGGA 58.967 52.381 0.00 0.00 34.52 3.41
2747 3271 2.431057 GGCTTCTACTCCTCGAATGGAA 59.569 50.000 0.00 0.00 35.43 3.53
2748 3272 3.070302 GGCTTCTACTCCTCGAATGGAAT 59.930 47.826 0.00 0.00 35.43 3.01
2749 3273 4.281182 GGCTTCTACTCCTCGAATGGAATA 59.719 45.833 0.00 0.00 35.43 1.75
2750 3274 5.465935 GCTTCTACTCCTCGAATGGAATAG 58.534 45.833 3.45 3.45 37.30 1.73
2751 3275 5.241949 GCTTCTACTCCTCGAATGGAATAGA 59.758 44.000 7.57 7.57 41.44 1.98
2752 3276 6.071616 GCTTCTACTCCTCGAATGGAATAGAT 60.072 42.308 11.36 0.00 42.29 1.98
2753 3277 7.524698 GCTTCTACTCCTCGAATGGAATAGATT 60.525 40.741 11.36 0.00 42.29 2.40
2754 3278 7.220741 TCTACTCCTCGAATGGAATAGATTG 57.779 40.000 7.57 0.00 39.23 2.67
2755 3279 5.878406 ACTCCTCGAATGGAATAGATTGT 57.122 39.130 0.00 0.00 35.43 2.71
2756 3280 5.848406 ACTCCTCGAATGGAATAGATTGTC 58.152 41.667 0.00 0.00 35.43 3.18
2757 3281 5.600484 ACTCCTCGAATGGAATAGATTGTCT 59.400 40.000 0.00 0.00 35.43 3.41
2758 3282 6.090483 TCCTCGAATGGAATAGATTGTCTC 57.910 41.667 0.00 0.00 32.39 3.36
2759 3283 5.835819 TCCTCGAATGGAATAGATTGTCTCT 59.164 40.000 0.00 0.00 33.91 3.10
2760 3284 6.015856 TCCTCGAATGGAATAGATTGTCTCTC 60.016 42.308 0.00 0.00 32.48 3.20
2761 3285 6.015519 CCTCGAATGGAATAGATTGTCTCTCT 60.016 42.308 0.00 0.00 35.28 3.10
2762 3286 6.976088 TCGAATGGAATAGATTGTCTCTCTC 58.024 40.000 0.00 0.00 35.28 3.20
2763 3287 5.855925 CGAATGGAATAGATTGTCTCTCTCG 59.144 44.000 0.00 0.00 35.28 4.04
2764 3288 6.514212 CGAATGGAATAGATTGTCTCTCTCGT 60.514 42.308 0.00 0.00 35.28 4.18
2765 3289 5.506686 TGGAATAGATTGTCTCTCTCGTG 57.493 43.478 0.00 0.00 35.28 4.35
2766 3290 4.950475 TGGAATAGATTGTCTCTCTCGTGT 59.050 41.667 0.00 0.00 35.28 4.49
2767 3291 5.419155 TGGAATAGATTGTCTCTCTCGTGTT 59.581 40.000 0.00 0.00 35.28 3.32
2768 3292 6.602009 TGGAATAGATTGTCTCTCTCGTGTTA 59.398 38.462 0.00 0.00 35.28 2.41
2769 3293 7.285629 TGGAATAGATTGTCTCTCTCGTGTTAT 59.714 37.037 0.00 0.00 35.28 1.89
2770 3294 8.138712 GGAATAGATTGTCTCTCTCGTGTTATT 58.861 37.037 0.00 0.00 35.28 1.40
2771 3295 8.864069 AATAGATTGTCTCTCTCGTGTTATTG 57.136 34.615 0.00 0.00 35.28 1.90
2772 3296 5.655488 AGATTGTCTCTCTCGTGTTATTGG 58.345 41.667 0.00 0.00 0.00 3.16
2773 3297 3.868757 TGTCTCTCTCGTGTTATTGGG 57.131 47.619 0.00 0.00 0.00 4.12
2774 3298 3.162666 TGTCTCTCTCGTGTTATTGGGT 58.837 45.455 0.00 0.00 0.00 4.51
2775 3299 4.338012 TGTCTCTCTCGTGTTATTGGGTA 58.662 43.478 0.00 0.00 0.00 3.69
2776 3300 4.768448 TGTCTCTCTCGTGTTATTGGGTAA 59.232 41.667 0.00 0.00 0.00 2.85
2777 3301 5.244402 TGTCTCTCTCGTGTTATTGGGTAAA 59.756 40.000 0.00 0.00 0.00 2.01
2778 3302 6.070995 TGTCTCTCTCGTGTTATTGGGTAAAT 60.071 38.462 0.00 0.00 0.00 1.40
2779 3303 7.123098 TGTCTCTCTCGTGTTATTGGGTAAATA 59.877 37.037 0.00 0.00 0.00 1.40
2780 3304 7.977853 GTCTCTCTCGTGTTATTGGGTAAATAA 59.022 37.037 0.00 0.00 38.21 1.40
2818 3342 9.725019 ATATATTTTAGAGCATCAACAATCGGA 57.275 29.630 0.00 0.00 37.82 4.55
2819 3343 6.757897 ATTTTAGAGCATCAACAATCGGAA 57.242 33.333 0.00 0.00 37.82 4.30
2820 3344 6.757897 TTTTAGAGCATCAACAATCGGAAT 57.242 33.333 0.00 0.00 37.82 3.01
2821 3345 7.857734 TTTTAGAGCATCAACAATCGGAATA 57.142 32.000 0.00 0.00 37.82 1.75
2822 3346 7.482654 TTTAGAGCATCAACAATCGGAATAG 57.517 36.000 0.00 0.00 37.82 1.73
2823 3347 5.028549 AGAGCATCAACAATCGGAATAGT 57.971 39.130 0.00 0.00 37.82 2.12
2824 3348 5.053145 AGAGCATCAACAATCGGAATAGTC 58.947 41.667 0.00 0.00 37.82 2.59
2825 3349 4.769688 AGCATCAACAATCGGAATAGTCA 58.230 39.130 0.00 0.00 0.00 3.41
2826 3350 5.185454 AGCATCAACAATCGGAATAGTCAA 58.815 37.500 0.00 0.00 0.00 3.18
2827 3351 5.647658 AGCATCAACAATCGGAATAGTCAAA 59.352 36.000 0.00 0.00 0.00 2.69
2828 3352 6.319658 AGCATCAACAATCGGAATAGTCAAAT 59.680 34.615 0.00 0.00 0.00 2.32
2829 3353 6.634436 GCATCAACAATCGGAATAGTCAAATC 59.366 38.462 0.00 0.00 0.00 2.17
2830 3354 7.467811 GCATCAACAATCGGAATAGTCAAATCT 60.468 37.037 0.00 0.00 0.00 2.40
2831 3355 7.307493 TCAACAATCGGAATAGTCAAATCTG 57.693 36.000 0.00 0.00 0.00 2.90
2832 3356 5.741388 ACAATCGGAATAGTCAAATCTGC 57.259 39.130 0.00 0.00 0.00 4.26
2833 3357 4.576463 ACAATCGGAATAGTCAAATCTGCC 59.424 41.667 0.00 0.00 0.00 4.85
2834 3358 4.696479 ATCGGAATAGTCAAATCTGCCT 57.304 40.909 0.00 0.00 0.00 4.75
2835 3359 4.060038 TCGGAATAGTCAAATCTGCCTC 57.940 45.455 0.00 0.00 0.00 4.70
2836 3360 3.134458 CGGAATAGTCAAATCTGCCTCC 58.866 50.000 0.00 0.00 0.00 4.30
2837 3361 3.181461 CGGAATAGTCAAATCTGCCTCCT 60.181 47.826 0.00 0.00 0.00 3.69
2838 3362 4.039245 CGGAATAGTCAAATCTGCCTCCTA 59.961 45.833 0.00 0.00 0.00 2.94
2839 3363 5.279708 CGGAATAGTCAAATCTGCCTCCTAT 60.280 44.000 0.00 0.00 0.00 2.57
2840 3364 6.071334 CGGAATAGTCAAATCTGCCTCCTATA 60.071 42.308 0.00 0.00 0.00 1.31
2841 3365 7.364232 CGGAATAGTCAAATCTGCCTCCTATAT 60.364 40.741 0.00 0.00 0.00 0.86
2842 3366 7.768120 GGAATAGTCAAATCTGCCTCCTATATG 59.232 40.741 0.00 0.00 0.00 1.78
2843 3367 7.805083 ATAGTCAAATCTGCCTCCTATATGT 57.195 36.000 0.00 0.00 0.00 2.29
2844 3368 6.107901 AGTCAAATCTGCCTCCTATATGTC 57.892 41.667 0.00 0.00 0.00 3.06
2845 3369 5.012561 AGTCAAATCTGCCTCCTATATGTCC 59.987 44.000 0.00 0.00 0.00 4.02
2846 3370 4.021104 TCAAATCTGCCTCCTATATGTCCG 60.021 45.833 0.00 0.00 0.00 4.79
2847 3371 1.257743 TCTGCCTCCTATATGTCCGC 58.742 55.000 0.00 0.00 0.00 5.54
2848 3372 0.109086 CTGCCTCCTATATGTCCGCG 60.109 60.000 0.00 0.00 0.00 6.46
2849 3373 1.215647 GCCTCCTATATGTCCGCGG 59.784 63.158 22.12 22.12 0.00 6.46
2850 3374 1.248785 GCCTCCTATATGTCCGCGGA 61.249 60.000 27.28 27.28 0.00 5.54
2851 3375 1.475403 CCTCCTATATGTCCGCGGAT 58.525 55.000 33.58 19.62 0.00 4.18
2852 3376 1.135139 CCTCCTATATGTCCGCGGATG 59.865 57.143 33.58 16.25 0.00 3.51
2853 3377 0.530744 TCCTATATGTCCGCGGATGC 59.469 55.000 33.58 20.38 37.91 3.91
2874 3398 4.115199 GGCCGCCCACCTCTCATT 62.115 66.667 0.00 0.00 0.00 2.57
2875 3399 2.044946 GCCGCCCACCTCTCATTT 60.045 61.111 0.00 0.00 0.00 2.32
2876 3400 2.409870 GCCGCCCACCTCTCATTTG 61.410 63.158 0.00 0.00 0.00 2.32
2877 3401 1.002134 CCGCCCACCTCTCATTTGT 60.002 57.895 0.00 0.00 0.00 2.83
2878 3402 0.609131 CCGCCCACCTCTCATTTGTT 60.609 55.000 0.00 0.00 0.00 2.83
2879 3403 0.523072 CGCCCACCTCTCATTTGTTG 59.477 55.000 0.00 0.00 0.00 3.33
2880 3404 1.620822 GCCCACCTCTCATTTGTTGT 58.379 50.000 0.00 0.00 0.00 3.32
2881 3405 1.270550 GCCCACCTCTCATTTGTTGTG 59.729 52.381 0.00 0.00 0.00 3.33
2882 3406 2.586425 CCCACCTCTCATTTGTTGTGT 58.414 47.619 0.00 0.00 0.00 3.72
2883 3407 2.554032 CCCACCTCTCATTTGTTGTGTC 59.446 50.000 0.00 0.00 0.00 3.67
2884 3408 2.554032 CCACCTCTCATTTGTTGTGTCC 59.446 50.000 0.00 0.00 0.00 4.02
2885 3409 2.224079 CACCTCTCATTTGTTGTGTCCG 59.776 50.000 0.00 0.00 0.00 4.79
2886 3410 1.197721 CCTCTCATTTGTTGTGTCCGC 59.802 52.381 0.00 0.00 0.00 5.54
2887 3411 1.872952 CTCTCATTTGTTGTGTCCGCA 59.127 47.619 0.00 0.00 0.00 5.69
2888 3412 1.872952 TCTCATTTGTTGTGTCCGCAG 59.127 47.619 0.00 0.00 0.00 5.18
2889 3413 0.310543 TCATTTGTTGTGTCCGCAGC 59.689 50.000 0.00 0.00 0.00 5.25
2890 3414 0.664166 CATTTGTTGTGTCCGCAGCC 60.664 55.000 0.00 0.00 0.00 4.85
2891 3415 2.128853 ATTTGTTGTGTCCGCAGCCG 62.129 55.000 0.00 0.00 0.00 5.52
2907 3431 4.574614 CGCCCCCTCCCCCTCATA 62.575 72.222 0.00 0.00 0.00 2.15
2908 3432 2.211279 GCCCCCTCCCCCTCATAT 59.789 66.667 0.00 0.00 0.00 1.78
2909 3433 1.925972 GCCCCCTCCCCCTCATATC 60.926 68.421 0.00 0.00 0.00 1.63
2910 3434 1.879320 CCCCCTCCCCCTCATATCT 59.121 63.158 0.00 0.00 0.00 1.98
2911 3435 1.102066 CCCCCTCCCCCTCATATCTA 58.898 60.000 0.00 0.00 0.00 1.98
2912 3436 1.008938 CCCCCTCCCCCTCATATCTAG 59.991 61.905 0.00 0.00 0.00 2.43
2913 3437 2.011467 CCCCTCCCCCTCATATCTAGA 58.989 57.143 0.00 0.00 0.00 2.43
2914 3438 2.292587 CCCCTCCCCCTCATATCTAGAC 60.293 59.091 0.00 0.00 0.00 2.59
2915 3439 2.292587 CCCTCCCCCTCATATCTAGACC 60.293 59.091 0.00 0.00 0.00 3.85
2916 3440 2.292587 CCTCCCCCTCATATCTAGACCC 60.293 59.091 0.00 0.00 0.00 4.46
2917 3441 1.722851 TCCCCCTCATATCTAGACCCC 59.277 57.143 0.00 0.00 0.00 4.95
2918 3442 1.273896 CCCCCTCATATCTAGACCCCC 60.274 61.905 0.00 0.00 0.00 5.40
2919 3443 1.437149 CCCCTCATATCTAGACCCCCA 59.563 57.143 0.00 0.00 0.00 4.96
2920 3444 2.541466 CCCTCATATCTAGACCCCCAC 58.459 57.143 0.00 0.00 0.00 4.61
2921 3445 2.541466 CCTCATATCTAGACCCCCACC 58.459 57.143 0.00 0.00 0.00 4.61
2922 3446 2.541466 CTCATATCTAGACCCCCACCC 58.459 57.143 0.00 0.00 0.00 4.61
2923 3447 2.112691 CTCATATCTAGACCCCCACCCT 59.887 54.545 0.00 0.00 0.00 4.34
2924 3448 2.158158 TCATATCTAGACCCCCACCCTG 60.158 54.545 0.00 0.00 0.00 4.45
2925 3449 0.566176 TATCTAGACCCCCACCCTGG 59.434 60.000 0.00 0.00 37.25 4.45
2926 3450 1.236026 ATCTAGACCCCCACCCTGGA 61.236 60.000 0.00 0.00 40.96 3.86
2927 3451 1.082206 CTAGACCCCCACCCTGGAA 59.918 63.158 0.00 0.00 40.96 3.53
2928 3452 0.327576 CTAGACCCCCACCCTGGAAT 60.328 60.000 0.00 0.00 40.96 3.01
2929 3453 0.122435 TAGACCCCCACCCTGGAATT 59.878 55.000 0.00 0.00 40.96 2.17
2930 3454 1.214992 AGACCCCCACCCTGGAATTC 61.215 60.000 0.00 0.00 40.96 2.17
2931 3455 2.224805 GACCCCCACCCTGGAATTCC 62.225 65.000 18.17 18.17 40.96 3.01
2932 3456 2.245379 CCCCCACCCTGGAATTCCA 61.245 63.158 25.53 25.53 40.96 3.53
2933 3457 1.593166 CCCCCACCCTGGAATTCCAT 61.593 60.000 27.20 10.52 46.46 3.41
2934 3458 0.397535 CCCCACCCTGGAATTCCATG 60.398 60.000 27.20 23.14 46.46 3.66
2935 3459 1.044790 CCCACCCTGGAATTCCATGC 61.045 60.000 27.20 0.00 46.46 4.06
2936 3460 0.324552 CCACCCTGGAATTCCATGCA 60.325 55.000 27.20 4.79 46.46 3.96
2937 3461 1.559368 CACCCTGGAATTCCATGCAA 58.441 50.000 27.20 4.39 46.46 4.08
2938 3462 1.205417 CACCCTGGAATTCCATGCAAC 59.795 52.381 27.20 0.00 46.46 4.17
2939 3463 1.203162 ACCCTGGAATTCCATGCAACA 60.203 47.619 27.20 2.85 46.46 3.33
2940 3464 2.112998 CCCTGGAATTCCATGCAACAT 58.887 47.619 27.20 0.00 46.46 2.71
2941 3465 3.298619 CCCTGGAATTCCATGCAACATA 58.701 45.455 27.20 1.31 46.46 2.29
2942 3466 3.319972 CCCTGGAATTCCATGCAACATAG 59.680 47.826 27.20 12.04 46.46 2.23
2943 3467 4.209538 CCTGGAATTCCATGCAACATAGA 58.790 43.478 27.20 0.00 46.46 1.98
2944 3468 4.831155 CCTGGAATTCCATGCAACATAGAT 59.169 41.667 27.20 0.00 46.46 1.98
2945 3469 6.005823 CCTGGAATTCCATGCAACATAGATA 58.994 40.000 27.20 0.00 46.46 1.98
2946 3470 6.150641 CCTGGAATTCCATGCAACATAGATAG 59.849 42.308 27.20 10.22 46.46 2.08
2947 3471 6.840527 TGGAATTCCATGCAACATAGATAGA 58.159 36.000 23.63 0.00 42.01 1.98
2948 3472 7.464273 TGGAATTCCATGCAACATAGATAGAT 58.536 34.615 23.63 0.00 42.01 1.98
2949 3473 8.605065 TGGAATTCCATGCAACATAGATAGATA 58.395 33.333 23.63 0.00 42.01 1.98
2950 3474 9.107177 GGAATTCCATGCAACATAGATAGATAG 57.893 37.037 20.04 0.00 35.64 2.08
2951 3475 8.503458 AATTCCATGCAACATAGATAGATAGC 57.497 34.615 0.00 0.00 0.00 2.97
2952 3476 6.610075 TCCATGCAACATAGATAGATAGCA 57.390 37.500 0.00 0.00 35.03 3.49
2953 3477 7.191593 TCCATGCAACATAGATAGATAGCAT 57.808 36.000 0.00 0.00 41.64 3.79
2954 3478 8.310122 TCCATGCAACATAGATAGATAGCATA 57.690 34.615 0.00 0.00 39.22 3.14
2955 3479 8.419442 TCCATGCAACATAGATAGATAGCATAG 58.581 37.037 0.00 0.00 39.22 2.23
2956 3480 7.171167 CCATGCAACATAGATAGATAGCATAGC 59.829 40.741 0.00 0.00 39.22 2.97
2957 3481 7.174107 TGCAACATAGATAGATAGCATAGCA 57.826 36.000 0.00 0.00 0.00 3.49
2958 3482 7.789026 TGCAACATAGATAGATAGCATAGCAT 58.211 34.615 0.00 0.00 0.00 3.79
2959 3483 8.917088 TGCAACATAGATAGATAGCATAGCATA 58.083 33.333 0.00 0.00 0.00 3.14
2960 3484 9.409312 GCAACATAGATAGATAGCATAGCATAG 57.591 37.037 0.00 0.00 0.00 2.23
2973 3497 7.840342 AGCATAGCATAGTATCAAACATAGC 57.160 36.000 0.00 0.00 0.00 2.97
2974 3498 7.389232 AGCATAGCATAGTATCAAACATAGCA 58.611 34.615 0.00 0.00 0.00 3.49
2975 3499 7.879677 AGCATAGCATAGTATCAAACATAGCAA 59.120 33.333 0.00 0.00 0.00 3.91
2976 3500 8.173775 GCATAGCATAGTATCAAACATAGCAAG 58.826 37.037 0.00 0.00 0.00 4.01
2977 3501 9.212641 CATAGCATAGTATCAAACATAGCAAGT 57.787 33.333 0.00 0.00 0.00 3.16
2988 3512 7.487484 TCAAACATAGCAAGTTCATTTCAACA 58.513 30.769 0.00 0.00 0.00 3.33
2993 3517 3.953612 AGCAAGTTCATTTCAACAGGACA 59.046 39.130 0.00 0.00 0.00 4.02
3015 3539 8.969267 GGACATACACAAAAGATAGATAGTTCG 58.031 37.037 0.00 0.00 0.00 3.95
3028 3552 9.872721 AGATAGATAGTTCGATCGATGTACTAA 57.127 33.333 24.36 13.56 38.57 2.24
3034 3558 6.849502 AGTTCGATCGATGTACTAAGACAAA 58.150 36.000 20.18 0.00 31.83 2.83
3060 3584 7.985634 ACAACTAAAAGTGTGCAATAGTTTG 57.014 32.000 5.96 0.00 35.29 2.93
3062 3586 7.487829 ACAACTAAAAGTGTGCAATAGTTTGTG 59.512 33.333 5.96 5.28 35.29 3.33
3066 3590 3.820557 AGTGTGCAATAGTTTGTGGAGT 58.179 40.909 0.00 0.00 35.17 3.85
3073 3597 1.873698 TAGTTTGTGGAGTTCACCGC 58.126 50.000 0.00 0.00 45.48 5.68
3076 3600 1.002792 GTTTGTGGAGTTCACCGCTTC 60.003 52.381 0.00 0.00 45.48 3.86
3105 3629 2.294078 CCTTCCCCTTGGCGTCTCT 61.294 63.158 0.00 0.00 0.00 3.10
3106 3630 1.078848 CTTCCCCTTGGCGTCTCTG 60.079 63.158 0.00 0.00 0.00 3.35
3113 3637 2.383245 CTTGGCGTCTCTGGTGTGGT 62.383 60.000 0.00 0.00 0.00 4.16
3114 3638 2.357517 GGCGTCTCTGGTGTGGTG 60.358 66.667 0.00 0.00 0.00 4.17
3121 3645 0.036952 CTCTGGTGTGGTGGCAGTAG 60.037 60.000 0.00 0.00 0.00 2.57
3135 3659 2.143925 GCAGTAGGTGTCAAAGTCCAC 58.856 52.381 0.00 0.00 0.00 4.02
3143 3667 2.931325 GTGTCAAAGTCCACGTTGTACA 59.069 45.455 5.46 0.00 36.82 2.90
3181 3705 1.765314 GCATCATGGTCACTAGAGGGT 59.235 52.381 0.00 0.00 0.00 4.34
3186 3710 1.081481 TGGTCACTAGAGGGTGAGGA 58.919 55.000 0.00 0.00 45.31 3.71
3187 3711 1.646447 TGGTCACTAGAGGGTGAGGAT 59.354 52.381 0.00 0.00 45.31 3.24
3191 3715 2.853077 TCACTAGAGGGTGAGGATGAGA 59.147 50.000 0.00 0.00 40.72 3.27
3194 3718 2.173126 AGAGGGTGAGGATGAGAAGG 57.827 55.000 0.00 0.00 0.00 3.46
3198 3722 1.127343 GGTGAGGATGAGAAGGGGAG 58.873 60.000 0.00 0.00 0.00 4.30
3253 3777 2.563427 GCAAGCCGCTCCACTTTC 59.437 61.111 0.00 0.00 37.77 2.62
3254 3778 2.260869 GCAAGCCGCTCCACTTTCA 61.261 57.895 0.00 0.00 37.77 2.69
3255 3779 1.871772 CAAGCCGCTCCACTTTCAG 59.128 57.895 0.00 0.00 0.00 3.02
3256 3780 0.886490 CAAGCCGCTCCACTTTCAGT 60.886 55.000 0.00 0.00 0.00 3.41
3259 3783 1.166531 GCCGCTCCACTTTCAGTGTT 61.167 55.000 3.30 0.00 44.50 3.32
3262 3786 2.541588 CCGCTCCACTTTCAGTGTTTTG 60.542 50.000 3.30 0.00 44.50 2.44
3266 3790 1.535860 CCACTTTCAGTGTTTTGGCCG 60.536 52.381 0.00 0.00 44.50 6.13
3290 3814 2.048222 CCTTGTCAAGGCGCTCGA 60.048 61.111 18.66 0.00 42.78 4.04
3297 3821 1.807573 CAAGGCGCTCGAACTCCTC 60.808 63.158 7.64 0.00 0.00 3.71
3320 3844 1.675310 CCGAGCCACAATGCCTTGA 60.675 57.895 8.84 0.00 36.20 3.02
3328 3852 3.058777 GCCACAATGCCTTGACAATTTTG 60.059 43.478 8.84 0.00 36.20 2.44
3333 3857 0.785979 GCCTTGACAATTTTGCAGCG 59.214 50.000 0.00 0.00 0.00 5.18
3336 3860 0.938637 TTGACAATTTTGCAGCGGCG 60.939 50.000 0.51 0.51 45.35 6.46
3376 3900 2.422597 GTCAACGACCAATGGATGACA 58.577 47.619 6.16 0.00 37.65 3.58
3380 3904 3.565764 ACGACCAATGGATGACATCAT 57.434 42.857 17.08 6.22 39.40 2.45
3390 3914 3.581770 TGGATGACATCATGGAGGAGATC 59.418 47.826 17.08 0.00 36.57 2.75
3391 3915 3.839490 GGATGACATCATGGAGGAGATCT 59.161 47.826 17.08 0.00 36.57 2.75
3403 3927 1.324383 GGAGATCTTCCTCCGAGTCC 58.676 60.000 0.00 0.00 42.80 3.85
3456 3980 1.404986 CCCGCAAACAGACCGAATAGA 60.405 52.381 0.00 0.00 0.00 1.98
3461 3985 3.737047 GCAAACAGACCGAATAGATCCGA 60.737 47.826 0.00 0.00 0.00 4.55
3463 3987 1.955080 ACAGACCGAATAGATCCGACC 59.045 52.381 0.00 0.00 0.00 4.79
3464 3988 2.231529 CAGACCGAATAGATCCGACCT 58.768 52.381 0.00 0.00 0.00 3.85
3465 3989 3.181447 ACAGACCGAATAGATCCGACCTA 60.181 47.826 0.00 0.00 0.00 3.08
3468 3992 1.473278 CCGAATAGATCCGACCTAGGC 59.527 57.143 9.30 0.36 0.00 3.93
3473 3997 2.446036 ATCCGACCTAGGCCACCC 60.446 66.667 9.30 0.00 0.00 4.61
3474 3998 3.326385 ATCCGACCTAGGCCACCCA 62.326 63.158 9.30 0.00 0.00 4.51
3477 4001 2.285442 GACCTAGGCCACCCACCT 60.285 66.667 9.30 0.00 41.57 4.00
3479 4003 3.470888 CCTAGGCCACCCACCTCG 61.471 72.222 5.01 0.00 38.81 4.63
3480 4004 4.162690 CTAGGCCACCCACCTCGC 62.163 72.222 5.01 0.00 38.81 5.03
3488 4012 2.738521 CCCACCTCGCACGACAAG 60.739 66.667 0.00 0.00 0.00 3.16
3506 4030 2.034221 GTGCCCTCACCTCCAACC 59.966 66.667 0.00 0.00 37.24 3.77
3507 4031 3.256960 TGCCCTCACCTCCAACCC 61.257 66.667 0.00 0.00 0.00 4.11
3509 4033 2.840753 GCCCTCACCTCCAACCCAA 61.841 63.158 0.00 0.00 0.00 4.12
3519 4043 1.074951 CCAACCCAAGGAGTCACCC 59.925 63.158 0.00 0.00 40.05 4.61
3522 4046 2.531685 CCCAAGGAGTCACCCCCA 60.532 66.667 0.00 0.00 40.05 4.96
3523 4047 1.930656 CCCAAGGAGTCACCCCCAT 60.931 63.158 0.00 0.00 40.05 4.00
3531 4055 0.544357 AGTCACCCCCATCAACTCGA 60.544 55.000 0.00 0.00 0.00 4.04
3575 4099 2.518825 CGGGAGGAGTAGGGGACG 60.519 72.222 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 9.131791 GGGAGTAGCAAAAAGAATATATTCCAA 57.868 33.333 19.67 0.00 37.51 3.53
17 18 8.502738 AGGGAGTAGCAAAAAGAATATATTCCA 58.497 33.333 19.67 0.00 37.51 3.53
18 19 8.926092 AGGGAGTAGCAAAAAGAATATATTCC 57.074 34.615 19.67 5.62 37.51 3.01
19 20 9.004717 GGAGGGAGTAGCAAAAAGAATATATTC 57.995 37.037 16.35 16.35 37.06 1.75
20 21 7.661847 CGGAGGGAGTAGCAAAAAGAATATATT 59.338 37.037 0.00 0.00 0.00 1.28
21 22 7.162082 CGGAGGGAGTAGCAAAAAGAATATAT 58.838 38.462 0.00 0.00 0.00 0.86
22 23 6.099269 ACGGAGGGAGTAGCAAAAAGAATATA 59.901 38.462 0.00 0.00 0.00 0.86
23 24 5.104485 ACGGAGGGAGTAGCAAAAAGAATAT 60.104 40.000 0.00 0.00 0.00 1.28
24 25 4.224370 ACGGAGGGAGTAGCAAAAAGAATA 59.776 41.667 0.00 0.00 0.00 1.75
25 26 3.009143 ACGGAGGGAGTAGCAAAAAGAAT 59.991 43.478 0.00 0.00 0.00 2.40
26 27 2.370849 ACGGAGGGAGTAGCAAAAAGAA 59.629 45.455 0.00 0.00 0.00 2.52
27 28 1.975680 ACGGAGGGAGTAGCAAAAAGA 59.024 47.619 0.00 0.00 0.00 2.52
28 29 2.474410 ACGGAGGGAGTAGCAAAAAG 57.526 50.000 0.00 0.00 0.00 2.27
29 30 2.105134 TGAACGGAGGGAGTAGCAAAAA 59.895 45.455 0.00 0.00 0.00 1.94
30 31 1.695242 TGAACGGAGGGAGTAGCAAAA 59.305 47.619 0.00 0.00 0.00 2.44
31 32 1.001633 GTGAACGGAGGGAGTAGCAAA 59.998 52.381 0.00 0.00 0.00 3.68
32 33 0.606604 GTGAACGGAGGGAGTAGCAA 59.393 55.000 0.00 0.00 0.00 3.91
33 34 0.251653 AGTGAACGGAGGGAGTAGCA 60.252 55.000 0.00 0.00 0.00 3.49
34 35 0.896226 AAGTGAACGGAGGGAGTAGC 59.104 55.000 0.00 0.00 0.00 3.58
35 36 3.244112 ACAAAAGTGAACGGAGGGAGTAG 60.244 47.826 0.00 0.00 0.00 2.57
36 37 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
37 38 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
38 39 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
39 40 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
40 41 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
41 42 4.124238 TGACTTACAAAAGTGAACGGAGG 58.876 43.478 0.00 0.00 46.09 4.30
42 43 5.924475 ATGACTTACAAAAGTGAACGGAG 57.076 39.130 0.00 0.00 46.09 4.63
43 44 6.316640 TGAAATGACTTACAAAAGTGAACGGA 59.683 34.615 0.00 0.00 46.09 4.69
44 45 6.491394 TGAAATGACTTACAAAAGTGAACGG 58.509 36.000 0.00 0.00 46.09 4.44
45 46 7.373441 GTCTGAAATGACTTACAAAAGTGAACG 59.627 37.037 0.00 0.00 46.09 3.95
46 47 8.181573 TGTCTGAAATGACTTACAAAAGTGAAC 58.818 33.333 0.00 0.00 46.09 3.18
47 48 8.275015 TGTCTGAAATGACTTACAAAAGTGAA 57.725 30.769 0.00 0.00 46.09 3.18
48 49 7.857734 TGTCTGAAATGACTTACAAAAGTGA 57.142 32.000 0.00 0.00 46.09 3.41
49 50 9.520204 AATTGTCTGAAATGACTTACAAAAGTG 57.480 29.630 0.00 0.00 46.09 3.16
51 52 9.734620 TCAATTGTCTGAAATGACTTACAAAAG 57.265 29.630 5.13 0.00 37.79 2.27
58 59 9.918630 CCTATTTTCAATTGTCTGAAATGACTT 57.081 29.630 5.13 0.00 43.12 3.01
59 60 8.031277 GCCTATTTTCAATTGTCTGAAATGACT 58.969 33.333 5.13 0.00 43.12 3.41
60 61 8.031277 AGCCTATTTTCAATTGTCTGAAATGAC 58.969 33.333 5.13 0.00 43.12 3.06
61 62 8.125978 AGCCTATTTTCAATTGTCTGAAATGA 57.874 30.769 5.13 0.00 43.12 2.57
62 63 9.294030 GTAGCCTATTTTCAATTGTCTGAAATG 57.706 33.333 5.13 4.51 43.12 2.32
63 64 9.247861 AGTAGCCTATTTTCAATTGTCTGAAAT 57.752 29.630 5.13 10.15 43.12 2.17
64 65 8.635765 AGTAGCCTATTTTCAATTGTCTGAAA 57.364 30.769 5.13 3.86 42.21 2.69
65 66 8.635765 AAGTAGCCTATTTTCAATTGTCTGAA 57.364 30.769 5.13 0.00 33.48 3.02
66 67 8.514594 CAAAGTAGCCTATTTTCAATTGTCTGA 58.485 33.333 5.13 0.00 0.00 3.27
67 68 7.274250 GCAAAGTAGCCTATTTTCAATTGTCTG 59.726 37.037 5.13 0.00 0.00 3.51
68 69 7.039784 TGCAAAGTAGCCTATTTTCAATTGTCT 60.040 33.333 5.13 0.00 0.00 3.41
69 70 7.062255 GTGCAAAGTAGCCTATTTTCAATTGTC 59.938 37.037 5.13 0.00 0.00 3.18
70 71 6.868339 GTGCAAAGTAGCCTATTTTCAATTGT 59.132 34.615 5.13 0.00 0.00 2.71
71 72 6.033831 CGTGCAAAGTAGCCTATTTTCAATTG 59.966 38.462 0.00 0.00 0.00 2.32
72 73 6.092748 CGTGCAAAGTAGCCTATTTTCAATT 58.907 36.000 0.00 0.00 0.00 2.32
73 74 5.640732 CGTGCAAAGTAGCCTATTTTCAAT 58.359 37.500 0.00 0.00 0.00 2.57
74 75 4.614993 GCGTGCAAAGTAGCCTATTTTCAA 60.615 41.667 0.00 0.00 0.00 2.69
75 76 3.119990 GCGTGCAAAGTAGCCTATTTTCA 60.120 43.478 0.00 0.00 0.00 2.69
76 77 3.127030 AGCGTGCAAAGTAGCCTATTTTC 59.873 43.478 0.00 0.00 0.00 2.29
77 78 3.081804 AGCGTGCAAAGTAGCCTATTTT 58.918 40.909 0.00 0.00 0.00 1.82
78 79 2.420022 CAGCGTGCAAAGTAGCCTATTT 59.580 45.455 0.00 0.00 0.00 1.40
79 80 2.009774 CAGCGTGCAAAGTAGCCTATT 58.990 47.619 0.00 0.00 0.00 1.73
80 81 1.066143 ACAGCGTGCAAAGTAGCCTAT 60.066 47.619 0.00 0.00 0.00 2.57
81 82 0.320374 ACAGCGTGCAAAGTAGCCTA 59.680 50.000 0.00 0.00 0.00 3.93
82 83 0.951040 GACAGCGTGCAAAGTAGCCT 60.951 55.000 0.00 0.00 0.00 4.58
83 84 0.951040 AGACAGCGTGCAAAGTAGCC 60.951 55.000 0.00 0.00 0.00 3.93
84 85 0.164647 CAGACAGCGTGCAAAGTAGC 59.835 55.000 0.00 0.00 0.00 3.58
85 86 1.783284 TCAGACAGCGTGCAAAGTAG 58.217 50.000 0.00 0.00 0.00 2.57
86 87 2.232756 TTCAGACAGCGTGCAAAGTA 57.767 45.000 0.00 0.00 0.00 2.24
87 88 1.378531 TTTCAGACAGCGTGCAAAGT 58.621 45.000 0.00 0.00 0.00 2.66
88 89 2.693797 ATTTCAGACAGCGTGCAAAG 57.306 45.000 0.00 0.00 0.00 2.77
89 90 2.618241 AGAATTTCAGACAGCGTGCAAA 59.382 40.909 0.00 0.00 0.00 3.68
90 91 2.221169 AGAATTTCAGACAGCGTGCAA 58.779 42.857 0.00 0.00 0.00 4.08
91 92 1.882912 AGAATTTCAGACAGCGTGCA 58.117 45.000 0.00 0.00 0.00 4.57
92 93 2.224079 TGAAGAATTTCAGACAGCGTGC 59.776 45.455 0.00 0.00 38.37 5.34
93 94 4.214437 GTTGAAGAATTTCAGACAGCGTG 58.786 43.478 0.00 0.00 43.76 5.34
94 95 3.059597 CGTTGAAGAATTTCAGACAGCGT 60.060 43.478 13.60 0.00 43.76 5.07
95 96 3.473367 CGTTGAAGAATTTCAGACAGCG 58.527 45.455 0.00 5.93 43.76 5.18
96 97 3.229552 GCGTTGAAGAATTTCAGACAGC 58.770 45.455 0.00 0.00 43.76 4.40
97 98 3.499918 AGGCGTTGAAGAATTTCAGACAG 59.500 43.478 0.00 0.00 43.76 3.51
98 99 3.476552 AGGCGTTGAAGAATTTCAGACA 58.523 40.909 0.00 0.00 43.76 3.41
99 100 4.489679 AAGGCGTTGAAGAATTTCAGAC 57.510 40.909 0.00 0.00 43.76 3.51
100 101 7.915293 TTATAAGGCGTTGAAGAATTTCAGA 57.085 32.000 0.97 0.00 43.76 3.27
101 102 8.964420 TTTTATAAGGCGTTGAAGAATTTCAG 57.036 30.769 0.97 0.00 43.76 3.02
102 103 9.921637 ATTTTTATAAGGCGTTGAAGAATTTCA 57.078 25.926 0.97 0.00 41.44 2.69
104 105 9.921637 TCATTTTTATAAGGCGTTGAAGAATTT 57.078 25.926 0.97 0.00 0.00 1.82
105 106 9.921637 TTCATTTTTATAAGGCGTTGAAGAATT 57.078 25.926 0.97 0.00 0.00 2.17
106 107 9.353999 GTTCATTTTTATAAGGCGTTGAAGAAT 57.646 29.630 0.97 1.08 0.00 2.40
107 108 8.353684 TGTTCATTTTTATAAGGCGTTGAAGAA 58.646 29.630 0.97 0.00 0.00 2.52
108 109 7.877003 TGTTCATTTTTATAAGGCGTTGAAGA 58.123 30.769 0.97 0.00 0.00 2.87
109 110 8.020819 TCTGTTCATTTTTATAAGGCGTTGAAG 58.979 33.333 0.97 0.00 0.00 3.02
110 111 7.877003 TCTGTTCATTTTTATAAGGCGTTGAA 58.123 30.769 0.97 0.00 0.00 2.69
111 112 7.361713 CCTCTGTTCATTTTTATAAGGCGTTGA 60.362 37.037 0.97 0.00 0.00 3.18
112 113 6.747280 CCTCTGTTCATTTTTATAAGGCGTTG 59.253 38.462 0.97 0.00 0.00 4.10
113 114 6.127730 CCCTCTGTTCATTTTTATAAGGCGTT 60.128 38.462 0.00 0.00 0.00 4.84
114 115 5.357032 CCCTCTGTTCATTTTTATAAGGCGT 59.643 40.000 0.00 0.00 0.00 5.68
115 116 5.588648 TCCCTCTGTTCATTTTTATAAGGCG 59.411 40.000 0.00 0.00 0.00 5.52
116 117 6.603599 ACTCCCTCTGTTCATTTTTATAAGGC 59.396 38.462 0.00 0.00 0.00 4.35
117 118 9.110502 GTACTCCCTCTGTTCATTTTTATAAGG 57.889 37.037 0.00 0.00 0.00 2.69
118 119 9.667107 TGTACTCCCTCTGTTCATTTTTATAAG 57.333 33.333 0.00 0.00 0.00 1.73
121 122 9.533831 AAATGTACTCCCTCTGTTCATTTTTAT 57.466 29.630 0.00 0.00 40.14 1.40
122 123 8.934023 AAATGTACTCCCTCTGTTCATTTTTA 57.066 30.769 0.00 0.00 40.14 1.52
123 124 7.839680 AAATGTACTCCCTCTGTTCATTTTT 57.160 32.000 0.00 0.00 40.14 1.94
124 125 9.533831 AATAAATGTACTCCCTCTGTTCATTTT 57.466 29.630 13.53 3.88 40.14 1.82
125 126 9.533831 AAATAAATGTACTCCCTCTGTTCATTT 57.466 29.630 13.09 13.09 43.05 2.32
126 127 9.533831 AAAATAAATGTACTCCCTCTGTTCATT 57.466 29.630 0.00 0.00 37.13 2.57
128 129 9.444600 GTAAAATAAATGTACTCCCTCTGTTCA 57.555 33.333 0.00 0.00 0.00 3.18
129 130 8.890718 GGTAAAATAAATGTACTCCCTCTGTTC 58.109 37.037 0.00 0.00 0.00 3.18
130 131 7.832685 GGGTAAAATAAATGTACTCCCTCTGTT 59.167 37.037 0.00 0.00 0.00 3.16
131 132 7.344134 GGGTAAAATAAATGTACTCCCTCTGT 58.656 38.462 0.00 0.00 0.00 3.41
132 133 6.771267 GGGGTAAAATAAATGTACTCCCTCTG 59.229 42.308 0.00 0.00 32.96 3.35
133 134 6.681541 AGGGGTAAAATAAATGTACTCCCTCT 59.318 38.462 0.00 0.00 38.92 3.69
134 135 6.907961 AGGGGTAAAATAAATGTACTCCCTC 58.092 40.000 0.00 0.00 38.92 4.30
135 136 6.920695 AGGGGTAAAATAAATGTACTCCCT 57.079 37.500 0.00 0.00 38.92 4.20
136 137 9.730705 GTATAGGGGTAAAATAAATGTACTCCC 57.269 37.037 0.00 0.00 38.92 4.30
146 147 8.937835 GGGAAGTAGTGTATAGGGGTAAAATAA 58.062 37.037 0.00 0.00 0.00 1.40
147 148 7.233348 CGGGAAGTAGTGTATAGGGGTAAAATA 59.767 40.741 0.00 0.00 0.00 1.40
148 149 6.042437 CGGGAAGTAGTGTATAGGGGTAAAAT 59.958 42.308 0.00 0.00 0.00 1.82
149 150 5.363580 CGGGAAGTAGTGTATAGGGGTAAAA 59.636 44.000 0.00 0.00 0.00 1.52
150 151 4.895297 CGGGAAGTAGTGTATAGGGGTAAA 59.105 45.833 0.00 0.00 0.00 2.01
151 152 4.473444 CGGGAAGTAGTGTATAGGGGTAA 58.527 47.826 0.00 0.00 0.00 2.85
152 153 3.751893 GCGGGAAGTAGTGTATAGGGGTA 60.752 52.174 0.00 0.00 0.00 3.69
153 154 2.954792 CGGGAAGTAGTGTATAGGGGT 58.045 52.381 0.00 0.00 0.00 4.95
154 155 1.617357 GCGGGAAGTAGTGTATAGGGG 59.383 57.143 0.00 0.00 0.00 4.79
155 156 1.617357 GGCGGGAAGTAGTGTATAGGG 59.383 57.143 0.00 0.00 0.00 3.53
156 157 1.617357 GGGCGGGAAGTAGTGTATAGG 59.383 57.143 0.00 0.00 0.00 2.57
157 158 2.595238 AGGGCGGGAAGTAGTGTATAG 58.405 52.381 0.00 0.00 0.00 1.31
158 159 2.761786 AGGGCGGGAAGTAGTGTATA 57.238 50.000 0.00 0.00 0.00 1.47
159 160 2.595238 CTAGGGCGGGAAGTAGTGTAT 58.405 52.381 0.00 0.00 0.00 2.29
160 161 1.410648 CCTAGGGCGGGAAGTAGTGTA 60.411 57.143 0.00 0.00 0.00 2.90
161 162 0.686769 CCTAGGGCGGGAAGTAGTGT 60.687 60.000 0.00 0.00 0.00 3.55
162 163 0.686769 ACCTAGGGCGGGAAGTAGTG 60.687 60.000 14.81 0.00 0.00 2.74
163 164 0.929244 TACCTAGGGCGGGAAGTAGT 59.071 55.000 14.81 0.00 0.00 2.73
164 165 1.893801 CATACCTAGGGCGGGAAGTAG 59.106 57.143 14.81 0.00 0.00 2.57
165 166 1.218704 ACATACCTAGGGCGGGAAGTA 59.781 52.381 14.81 0.00 0.00 2.24
166 167 0.031414 ACATACCTAGGGCGGGAAGT 60.031 55.000 14.81 0.00 0.00 3.01
167 168 1.129058 AACATACCTAGGGCGGGAAG 58.871 55.000 14.81 0.00 0.00 3.46
172 173 1.553704 GGGGATAACATACCTAGGGCG 59.446 57.143 14.81 3.11 32.14 6.13
173 174 2.838813 GAGGGGATAACATACCTAGGGC 59.161 54.545 14.81 0.00 32.14 5.19
195 196 3.447944 GGACGGTTAGAATGGAGAGAAGT 59.552 47.826 0.00 0.00 0.00 3.01
210 211 1.969589 GCGGTTGGAATGGACGGTT 60.970 57.895 0.00 0.00 0.00 4.44
214 215 0.250513 AGAGAGCGGTTGGAATGGAC 59.749 55.000 0.00 0.00 0.00 4.02
227 228 3.376546 CCAGTGGAAAAAGCATAGAGAGC 59.623 47.826 1.68 0.00 0.00 4.09
262 263 1.747709 ATGTGAGGCTGTTGAGATGC 58.252 50.000 0.00 0.00 0.00 3.91
302 304 8.412456 TGTTGATGTGTTTGTGTATGAAAAGAT 58.588 29.630 0.00 0.00 0.00 2.40
314 316 8.939201 TGTCATTTTATTGTTGATGTGTTTGT 57.061 26.923 0.00 0.00 0.00 2.83
348 350 6.688578 ACGACTTTGTCTACACAATCACTAT 58.311 36.000 0.00 0.00 42.28 2.12
371 373 9.457110 TTGTACATATTGTGTTCAAATTGTGAC 57.543 29.630 0.00 0.00 42.68 3.67
398 401 4.446234 GTCGCGAATTGCACATCTATTAC 58.554 43.478 12.06 0.00 46.97 1.89
461 464 9.444600 TCTTTCTTCGGCTAGTAAATAATTGTT 57.555 29.630 0.00 0.00 0.00 2.83
473 476 7.539712 TTCATTATGTTCTTTCTTCGGCTAG 57.460 36.000 0.00 0.00 0.00 3.42
480 483 7.124750 CCCAGGGATTTCATTATGTTCTTTCTT 59.875 37.037 0.00 0.00 0.00 2.52
482 485 6.381133 ACCCAGGGATTTCATTATGTTCTTTC 59.619 38.462 14.54 0.00 0.00 2.62
520 523 9.268268 TCATTGTTCCGTATAAAACTATCCATC 57.732 33.333 0.00 0.00 0.00 3.51
535 538 8.792633 TGATTAGAAAAGATTTCATTGTTCCGT 58.207 29.630 5.71 0.00 0.00 4.69
557 562 7.224557 CCAAAGTCGTTTGAAAATCCTTTGATT 59.775 33.333 18.20 0.00 45.22 2.57
566 571 6.405278 AATCCTCCAAAGTCGTTTGAAAAT 57.595 33.333 0.36 0.00 45.22 1.82
576 581 8.889717 TCATAAATACGAAAATCCTCCAAAGTC 58.110 33.333 0.00 0.00 0.00 3.01
627 632 8.620416 AGTGCATTTTTAATTTGGGAAAGTTTC 58.380 29.630 7.09 7.09 0.00 2.78
671 676 5.087923 AGGGGTCTTTTAAAAGTTCCCAT 57.912 39.130 35.36 31.79 44.54 4.00
677 782 7.302948 ACTATTGGAAGGGGTCTTTTAAAAGT 58.697 34.615 23.75 6.97 37.31 2.66
688 793 5.036916 TGATTGTAGACTATTGGAAGGGGT 58.963 41.667 0.00 0.00 0.00 4.95
689 794 5.630415 TGATTGTAGACTATTGGAAGGGG 57.370 43.478 0.00 0.00 0.00 4.79
690 795 7.282585 TGATTGATTGTAGACTATTGGAAGGG 58.717 38.462 0.00 0.00 0.00 3.95
691 796 8.206867 TCTGATTGATTGTAGACTATTGGAAGG 58.793 37.037 0.00 0.00 0.00 3.46
730 835 6.284891 TCCAAAATGTGAAGGATTGATTCC 57.715 37.500 0.00 0.00 45.85 3.01
732 837 6.018469 TCCTCCAAAATGTGAAGGATTGATT 58.982 36.000 0.00 0.00 0.00 2.57
734 839 4.996793 TCCTCCAAAATGTGAAGGATTGA 58.003 39.130 0.00 0.00 0.00 2.57
735 840 5.726980 TTCCTCCAAAATGTGAAGGATTG 57.273 39.130 0.00 0.00 0.00 2.67
736 841 6.745794 TTTTCCTCCAAAATGTGAAGGATT 57.254 33.333 0.00 0.00 0.00 3.01
737 842 6.745794 TTTTTCCTCCAAAATGTGAAGGAT 57.254 33.333 0.00 0.00 33.82 3.24
786 891 9.812347 TGTCATTTAATGCATAGGATAGGAATT 57.188 29.630 0.00 0.00 34.48 2.17
787 892 9.986157 ATGTCATTTAATGCATAGGATAGGAAT 57.014 29.630 0.00 0.00 0.00 3.01
788 893 9.453572 GATGTCATTTAATGCATAGGATAGGAA 57.546 33.333 0.00 0.00 30.80 3.36
789 894 8.829746 AGATGTCATTTAATGCATAGGATAGGA 58.170 33.333 0.00 0.00 30.80 2.94
790 895 9.107177 GAGATGTCATTTAATGCATAGGATAGG 57.893 37.037 0.00 0.00 30.80 2.57
791 896 9.887629 AGAGATGTCATTTAATGCATAGGATAG 57.112 33.333 0.00 0.00 30.80 2.08
793 898 9.584008 AAAGAGATGTCATTTAATGCATAGGAT 57.416 29.630 0.00 0.00 30.80 3.24
794 899 8.985315 AAAGAGATGTCATTTAATGCATAGGA 57.015 30.769 0.00 0.00 30.80 2.94
795 900 9.064706 AGAAAGAGATGTCATTTAATGCATAGG 57.935 33.333 0.00 0.00 30.80 2.57
813 918 9.553064 GCATCTCAATTCCTATAAAGAAAGAGA 57.447 33.333 15.50 15.50 40.07 3.10
814 919 9.334947 TGCATCTCAATTCCTATAAAGAAAGAG 57.665 33.333 0.00 9.49 33.87 2.85
815 920 9.857656 ATGCATCTCAATTCCTATAAAGAAAGA 57.142 29.630 0.00 0.00 0.00 2.52
816 921 9.894783 CATGCATCTCAATTCCTATAAAGAAAG 57.105 33.333 0.00 0.00 0.00 2.62
817 922 9.412460 ACATGCATCTCAATTCCTATAAAGAAA 57.588 29.630 0.00 0.00 0.00 2.52
819 924 8.212995 TGACATGCATCTCAATTCCTATAAAGA 58.787 33.333 1.73 0.00 0.00 2.52
820 925 8.387190 TGACATGCATCTCAATTCCTATAAAG 57.613 34.615 1.73 0.00 0.00 1.85
836 941 9.570468 AATCATAAGAAGTAAGATGACATGCAT 57.430 29.630 0.00 0.00 40.77 3.96
880 985 7.773690 GGCCTACTTTGGTTCATAGAATAGAAA 59.226 37.037 0.00 0.00 0.00 2.52
882 987 6.615726 AGGCCTACTTTGGTTCATAGAATAGA 59.384 38.462 1.29 0.00 0.00 1.98
884 989 6.385759 TCAGGCCTACTTTGGTTCATAGAATA 59.614 38.462 3.98 0.00 0.00 1.75
885 990 5.191722 TCAGGCCTACTTTGGTTCATAGAAT 59.808 40.000 3.98 0.00 0.00 2.40
887 992 4.101114 TCAGGCCTACTTTGGTTCATAGA 58.899 43.478 3.98 0.00 0.00 1.98
888 993 4.080863 ACTCAGGCCTACTTTGGTTCATAG 60.081 45.833 3.98 0.00 0.00 2.23
890 995 2.644798 ACTCAGGCCTACTTTGGTTCAT 59.355 45.455 3.98 0.00 0.00 2.57
892 997 2.427506 CACTCAGGCCTACTTTGGTTC 58.572 52.381 3.98 0.00 0.00 3.62
894 999 0.693049 CCACTCAGGCCTACTTTGGT 59.307 55.000 3.98 0.00 0.00 3.67
895 1000 0.984230 TCCACTCAGGCCTACTTTGG 59.016 55.000 3.98 10.34 37.29 3.28
896 1001 1.347707 TGTCCACTCAGGCCTACTTTG 59.652 52.381 3.98 0.00 37.29 2.77
898 1003 1.625818 CTTGTCCACTCAGGCCTACTT 59.374 52.381 3.98 0.00 37.29 2.24
899 1004 1.270907 CTTGTCCACTCAGGCCTACT 58.729 55.000 3.98 0.00 37.29 2.57
900 1005 0.977395 ACTTGTCCACTCAGGCCTAC 59.023 55.000 3.98 0.00 37.29 3.18
902 1007 0.109342 CAACTTGTCCACTCAGGCCT 59.891 55.000 0.00 0.00 37.29 5.19
903 1008 0.108585 TCAACTTGTCCACTCAGGCC 59.891 55.000 0.00 0.00 37.29 5.19
904 1009 1.876156 CTTCAACTTGTCCACTCAGGC 59.124 52.381 0.00 0.00 37.29 4.85
906 1011 2.797156 CGACTTCAACTTGTCCACTCAG 59.203 50.000 0.00 0.00 0.00 3.35
907 1012 2.429250 TCGACTTCAACTTGTCCACTCA 59.571 45.455 0.00 0.00 0.00 3.41
1165 1637 2.426183 CGTCGTCGCTGTAGTGTGC 61.426 63.158 0.00 0.00 0.00 4.57
1266 1745 2.034532 TCCACCTGCTCGTCGGTA 59.965 61.111 0.00 0.00 30.91 4.02
1885 2409 1.339151 ACCCGCTTGATCTCCTCAAAC 60.339 52.381 0.00 0.00 43.20 2.93
1888 2412 1.667154 CGACCCGCTTGATCTCCTCA 61.667 60.000 0.00 0.00 0.00 3.86
1960 2484 4.129737 CGGACCATCGCTGACGGT 62.130 66.667 0.00 0.00 40.63 4.83
1987 2511 2.915659 AGCCCGACCACGAAGACA 60.916 61.111 0.00 0.00 42.66 3.41
2122 2646 0.101579 TGAAGCACGTCTTGACGACA 59.898 50.000 26.65 15.24 42.98 4.35
2527 3051 4.399395 TCTGGCAGGCGCAGGAAG 62.399 66.667 15.73 0.00 41.24 3.46
2536 3060 2.581354 CCCTTCGTCTCTGGCAGG 59.419 66.667 15.73 5.63 0.00 4.85
2596 3120 3.270877 GCCGAAAACCTACAGATGACAT 58.729 45.455 0.00 0.00 0.00 3.06
2715 3239 6.422400 CGAGGAGTAGAAGCCTTTTATTGATC 59.578 42.308 0.00 0.00 33.84 2.92
2725 3249 2.035632 CCATTCGAGGAGTAGAAGCCT 58.964 52.381 0.00 0.00 37.18 4.58
2726 3250 2.032620 TCCATTCGAGGAGTAGAAGCC 58.967 52.381 0.00 0.00 32.77 4.35
2727 3251 3.802948 TTCCATTCGAGGAGTAGAAGC 57.197 47.619 0.00 0.00 39.25 3.86
2731 3255 6.987386 ACAATCTATTCCATTCGAGGAGTAG 58.013 40.000 13.89 13.89 44.80 2.57
2732 3256 6.778069 AGACAATCTATTCCATTCGAGGAGTA 59.222 38.462 0.00 0.00 39.25 2.59
2733 3257 5.600484 AGACAATCTATTCCATTCGAGGAGT 59.400 40.000 0.00 0.00 39.25 3.85
2734 3258 6.015519 AGAGACAATCTATTCCATTCGAGGAG 60.016 42.308 0.00 0.00 36.19 3.69
2735 3259 5.835819 AGAGACAATCTATTCCATTCGAGGA 59.164 40.000 0.00 0.00 36.10 3.71
2736 3260 6.015519 AGAGAGACAATCTATTCCATTCGAGG 60.016 42.308 0.00 0.00 38.84 4.63
2737 3261 6.980593 AGAGAGACAATCTATTCCATTCGAG 58.019 40.000 0.00 0.00 38.84 4.04
2738 3262 6.293680 CGAGAGAGACAATCTATTCCATTCGA 60.294 42.308 0.00 0.00 38.84 3.71
2739 3263 5.855925 CGAGAGAGACAATCTATTCCATTCG 59.144 44.000 0.00 0.00 38.84 3.34
2740 3264 6.640499 CACGAGAGAGACAATCTATTCCATTC 59.360 42.308 0.00 0.00 38.84 2.67
2741 3265 6.097554 ACACGAGAGAGACAATCTATTCCATT 59.902 38.462 0.00 0.00 38.84 3.16
2742 3266 5.596361 ACACGAGAGAGACAATCTATTCCAT 59.404 40.000 0.00 0.00 38.84 3.41
2743 3267 4.950475 ACACGAGAGAGACAATCTATTCCA 59.050 41.667 0.00 0.00 38.84 3.53
2744 3268 5.508200 ACACGAGAGAGACAATCTATTCC 57.492 43.478 0.00 0.00 38.84 3.01
2745 3269 8.963130 CAATAACACGAGAGAGACAATCTATTC 58.037 37.037 0.00 0.00 38.84 1.75
2746 3270 7.923344 CCAATAACACGAGAGAGACAATCTATT 59.077 37.037 0.00 0.00 38.84 1.73
2747 3271 7.429633 CCAATAACACGAGAGAGACAATCTAT 58.570 38.462 0.00 0.00 38.84 1.98
2748 3272 6.183360 CCCAATAACACGAGAGAGACAATCTA 60.183 42.308 0.00 0.00 38.84 1.98
2749 3273 5.394663 CCCAATAACACGAGAGAGACAATCT 60.395 44.000 0.00 0.00 42.61 2.40
2750 3274 4.806247 CCCAATAACACGAGAGAGACAATC 59.194 45.833 0.00 0.00 0.00 2.67
2751 3275 4.223032 ACCCAATAACACGAGAGAGACAAT 59.777 41.667 0.00 0.00 0.00 2.71
2752 3276 3.576982 ACCCAATAACACGAGAGAGACAA 59.423 43.478 0.00 0.00 0.00 3.18
2753 3277 3.162666 ACCCAATAACACGAGAGAGACA 58.837 45.455 0.00 0.00 0.00 3.41
2754 3278 3.870633 ACCCAATAACACGAGAGAGAC 57.129 47.619 0.00 0.00 0.00 3.36
2755 3279 5.988310 TTTACCCAATAACACGAGAGAGA 57.012 39.130 0.00 0.00 0.00 3.10
2792 3316 9.725019 TCCGATTGTTGATGCTCTAAAATATAT 57.275 29.630 0.00 0.00 0.00 0.86
2793 3317 9.554395 TTCCGATTGTTGATGCTCTAAAATATA 57.446 29.630 0.00 0.00 0.00 0.86
2794 3318 8.450578 TTCCGATTGTTGATGCTCTAAAATAT 57.549 30.769 0.00 0.00 0.00 1.28
2795 3319 7.857734 TTCCGATTGTTGATGCTCTAAAATA 57.142 32.000 0.00 0.00 0.00 1.40
2796 3320 6.757897 TTCCGATTGTTGATGCTCTAAAAT 57.242 33.333 0.00 0.00 0.00 1.82
2797 3321 6.757897 ATTCCGATTGTTGATGCTCTAAAA 57.242 33.333 0.00 0.00 0.00 1.52
2798 3322 7.047891 ACTATTCCGATTGTTGATGCTCTAAA 58.952 34.615 0.00 0.00 0.00 1.85
2799 3323 6.582636 ACTATTCCGATTGTTGATGCTCTAA 58.417 36.000 0.00 0.00 0.00 2.10
2800 3324 6.161855 ACTATTCCGATTGTTGATGCTCTA 57.838 37.500 0.00 0.00 0.00 2.43
2801 3325 5.028549 ACTATTCCGATTGTTGATGCTCT 57.971 39.130 0.00 0.00 0.00 4.09
2802 3326 4.811024 TGACTATTCCGATTGTTGATGCTC 59.189 41.667 0.00 0.00 0.00 4.26
2803 3327 4.769688 TGACTATTCCGATTGTTGATGCT 58.230 39.130 0.00 0.00 0.00 3.79
2804 3328 5.484173 TTGACTATTCCGATTGTTGATGC 57.516 39.130 0.00 0.00 0.00 3.91
2805 3329 7.854422 CAGATTTGACTATTCCGATTGTTGATG 59.146 37.037 0.00 0.00 0.00 3.07
2806 3330 7.467811 GCAGATTTGACTATTCCGATTGTTGAT 60.468 37.037 0.00 0.00 0.00 2.57
2807 3331 6.183360 GCAGATTTGACTATTCCGATTGTTGA 60.183 38.462 0.00 0.00 0.00 3.18
2808 3332 5.967674 GCAGATTTGACTATTCCGATTGTTG 59.032 40.000 0.00 0.00 0.00 3.33
2809 3333 5.066505 GGCAGATTTGACTATTCCGATTGTT 59.933 40.000 0.00 0.00 0.00 2.83
2810 3334 4.576463 GGCAGATTTGACTATTCCGATTGT 59.424 41.667 0.00 0.00 0.00 2.71
2811 3335 4.818546 AGGCAGATTTGACTATTCCGATTG 59.181 41.667 0.00 0.00 42.31 2.67
2812 3336 5.041191 AGGCAGATTTGACTATTCCGATT 57.959 39.130 0.00 0.00 42.31 3.34
2813 3337 4.503991 GGAGGCAGATTTGACTATTCCGAT 60.504 45.833 0.00 0.00 44.85 4.18
2814 3338 3.181465 GGAGGCAGATTTGACTATTCCGA 60.181 47.826 0.00 0.00 44.85 4.55
2815 3339 3.134458 GGAGGCAGATTTGACTATTCCG 58.866 50.000 0.00 0.00 44.85 4.30
2816 3340 4.429854 AGGAGGCAGATTTGACTATTCC 57.570 45.455 0.00 0.00 44.85 3.01
2817 3341 8.317679 ACATATAGGAGGCAGATTTGACTATTC 58.682 37.037 0.00 0.00 44.85 1.75
2818 3342 8.212259 ACATATAGGAGGCAGATTTGACTATT 57.788 34.615 0.00 0.00 44.85 1.73
2819 3343 7.093112 GGACATATAGGAGGCAGATTTGACTAT 60.093 40.741 0.00 0.00 44.85 2.12
2820 3344 6.211584 GGACATATAGGAGGCAGATTTGACTA 59.788 42.308 0.00 0.00 44.85 2.59
2822 3346 5.241662 GGACATATAGGAGGCAGATTTGAC 58.758 45.833 0.00 0.00 0.00 3.18
2823 3347 4.021104 CGGACATATAGGAGGCAGATTTGA 60.021 45.833 0.00 0.00 0.00 2.69
2824 3348 4.248859 CGGACATATAGGAGGCAGATTTG 58.751 47.826 0.00 0.00 0.00 2.32
2825 3349 3.307059 GCGGACATATAGGAGGCAGATTT 60.307 47.826 0.00 0.00 0.00 2.17
2826 3350 2.234908 GCGGACATATAGGAGGCAGATT 59.765 50.000 0.00 0.00 0.00 2.40
2827 3351 1.827969 GCGGACATATAGGAGGCAGAT 59.172 52.381 0.00 0.00 0.00 2.90
2828 3352 1.257743 GCGGACATATAGGAGGCAGA 58.742 55.000 0.00 0.00 0.00 4.26
2829 3353 0.109086 CGCGGACATATAGGAGGCAG 60.109 60.000 0.00 0.00 0.00 4.85
2830 3354 1.532604 CCGCGGACATATAGGAGGCA 61.533 60.000 24.07 0.00 0.00 4.75
2831 3355 1.215647 CCGCGGACATATAGGAGGC 59.784 63.158 24.07 0.00 0.00 4.70
2832 3356 1.135139 CATCCGCGGACATATAGGAGG 59.865 57.143 33.75 1.62 34.14 4.30
2833 3357 1.469940 GCATCCGCGGACATATAGGAG 60.470 57.143 33.75 12.44 34.14 3.69
2834 3358 0.530744 GCATCCGCGGACATATAGGA 59.469 55.000 33.75 4.52 35.24 2.94
2835 3359 3.050703 GCATCCGCGGACATATAGG 57.949 57.895 33.75 10.20 0.00 2.57
2857 3381 3.645268 AAATGAGAGGTGGGCGGCC 62.645 63.158 23.42 23.42 0.00 6.13
2858 3382 2.044946 AAATGAGAGGTGGGCGGC 60.045 61.111 0.00 0.00 0.00 6.53
2859 3383 0.609131 AACAAATGAGAGGTGGGCGG 60.609 55.000 0.00 0.00 0.00 6.13
2860 3384 0.523072 CAACAAATGAGAGGTGGGCG 59.477 55.000 0.00 0.00 0.00 6.13
2861 3385 1.270550 CACAACAAATGAGAGGTGGGC 59.729 52.381 0.00 0.00 0.00 5.36
2862 3386 2.554032 GACACAACAAATGAGAGGTGGG 59.446 50.000 0.00 0.00 0.00 4.61
2863 3387 2.554032 GGACACAACAAATGAGAGGTGG 59.446 50.000 0.00 0.00 0.00 4.61
2864 3388 2.224079 CGGACACAACAAATGAGAGGTG 59.776 50.000 0.00 0.00 0.00 4.00
2865 3389 2.494059 CGGACACAACAAATGAGAGGT 58.506 47.619 0.00 0.00 0.00 3.85
2866 3390 1.197721 GCGGACACAACAAATGAGAGG 59.802 52.381 0.00 0.00 0.00 3.69
2867 3391 1.872952 TGCGGACACAACAAATGAGAG 59.127 47.619 0.00 0.00 0.00 3.20
2868 3392 1.872952 CTGCGGACACAACAAATGAGA 59.127 47.619 0.00 0.00 0.00 3.27
2869 3393 1.664016 GCTGCGGACACAACAAATGAG 60.664 52.381 0.00 0.00 0.00 2.90
2870 3394 0.310543 GCTGCGGACACAACAAATGA 59.689 50.000 0.00 0.00 0.00 2.57
2871 3395 0.664166 GGCTGCGGACACAACAAATG 60.664 55.000 0.00 0.00 0.00 2.32
2872 3396 1.659794 GGCTGCGGACACAACAAAT 59.340 52.632 0.00 0.00 0.00 2.32
2873 3397 2.829206 CGGCTGCGGACACAACAAA 61.829 57.895 0.00 0.00 0.00 2.83
2874 3398 3.276091 CGGCTGCGGACACAACAA 61.276 61.111 0.00 0.00 0.00 2.83
2890 3414 3.872487 ATATGAGGGGGAGGGGGCG 62.872 68.421 0.00 0.00 0.00 6.13
2891 3415 1.925972 GATATGAGGGGGAGGGGGC 60.926 68.421 0.00 0.00 0.00 5.80
2892 3416 1.008938 CTAGATATGAGGGGGAGGGGG 59.991 61.905 0.00 0.00 0.00 5.40
2893 3417 2.011467 TCTAGATATGAGGGGGAGGGG 58.989 57.143 0.00 0.00 0.00 4.79
2894 3418 2.292587 GGTCTAGATATGAGGGGGAGGG 60.293 59.091 0.00 0.00 0.00 4.30
2895 3419 2.292587 GGGTCTAGATATGAGGGGGAGG 60.293 59.091 0.00 0.00 0.00 4.30
2896 3420 2.292587 GGGGTCTAGATATGAGGGGGAG 60.293 59.091 0.00 0.00 0.00 4.30
2897 3421 1.722851 GGGGTCTAGATATGAGGGGGA 59.277 57.143 0.00 0.00 0.00 4.81
2898 3422 1.273896 GGGGGTCTAGATATGAGGGGG 60.274 61.905 0.00 0.00 0.00 5.40
2899 3423 1.437149 TGGGGGTCTAGATATGAGGGG 59.563 57.143 0.00 0.00 0.00 4.79
2900 3424 2.541466 GTGGGGGTCTAGATATGAGGG 58.459 57.143 0.00 0.00 0.00 4.30
2901 3425 2.541466 GGTGGGGGTCTAGATATGAGG 58.459 57.143 0.00 0.00 0.00 3.86
2902 3426 2.112691 AGGGTGGGGGTCTAGATATGAG 59.887 54.545 0.00 0.00 0.00 2.90
2903 3427 2.158158 CAGGGTGGGGGTCTAGATATGA 60.158 54.545 0.00 0.00 0.00 2.15
2904 3428 2.260822 CAGGGTGGGGGTCTAGATATG 58.739 57.143 0.00 0.00 0.00 1.78
2905 3429 1.152271 CCAGGGTGGGGGTCTAGATAT 59.848 57.143 0.00 0.00 32.67 1.63
2906 3430 0.566176 CCAGGGTGGGGGTCTAGATA 59.434 60.000 0.00 0.00 32.67 1.98
2907 3431 1.236026 TCCAGGGTGGGGGTCTAGAT 61.236 60.000 0.00 0.00 38.32 1.98
2908 3432 1.457380 TTCCAGGGTGGGGGTCTAGA 61.457 60.000 0.00 0.00 38.32 2.43
2909 3433 0.327576 ATTCCAGGGTGGGGGTCTAG 60.328 60.000 0.00 0.00 38.32 2.43
2910 3434 0.122435 AATTCCAGGGTGGGGGTCTA 59.878 55.000 0.00 0.00 38.32 2.59
2911 3435 1.151361 AATTCCAGGGTGGGGGTCT 60.151 57.895 0.00 0.00 38.32 3.85
2912 3436 1.306633 GAATTCCAGGGTGGGGGTC 59.693 63.158 0.00 0.00 38.32 4.46
2913 3437 2.246126 GGAATTCCAGGGTGGGGGT 61.246 63.158 20.04 0.00 38.32 4.95
2914 3438 2.245379 TGGAATTCCAGGGTGGGGG 61.245 63.158 23.63 0.00 42.01 5.40
2915 3439 3.519291 TGGAATTCCAGGGTGGGG 58.481 61.111 23.63 0.00 42.01 4.96
2924 3448 7.934855 ATCTATCTATGTTGCATGGAATTCC 57.065 36.000 18.17 18.17 0.00 3.01
2925 3449 8.610896 GCTATCTATCTATGTTGCATGGAATTC 58.389 37.037 1.94 0.00 0.00 2.17
2926 3450 8.105197 TGCTATCTATCTATGTTGCATGGAATT 58.895 33.333 1.94 0.00 0.00 2.17
2927 3451 7.627311 TGCTATCTATCTATGTTGCATGGAAT 58.373 34.615 1.94 0.00 0.00 3.01
2928 3452 7.008021 TGCTATCTATCTATGTTGCATGGAA 57.992 36.000 0.00 0.00 0.00 3.53
2929 3453 6.610075 TGCTATCTATCTATGTTGCATGGA 57.390 37.500 0.00 0.00 0.00 3.41
2930 3454 7.171167 GCTATGCTATCTATCTATGTTGCATGG 59.829 40.741 0.00 0.00 39.71 3.66
2931 3455 7.709613 TGCTATGCTATCTATCTATGTTGCATG 59.290 37.037 0.00 0.00 39.71 4.06
2932 3456 7.789026 TGCTATGCTATCTATCTATGTTGCAT 58.211 34.615 0.00 0.00 41.76 3.96
2933 3457 7.174107 TGCTATGCTATCTATCTATGTTGCA 57.826 36.000 0.00 0.00 0.00 4.08
2934 3458 9.409312 CTATGCTATGCTATCTATCTATGTTGC 57.591 37.037 0.00 0.00 0.00 4.17
2947 3471 9.539825 GCTATGTTTGATACTATGCTATGCTAT 57.460 33.333 0.00 0.00 0.00 2.97
2948 3472 8.531146 TGCTATGTTTGATACTATGCTATGCTA 58.469 33.333 0.00 0.00 0.00 3.49
2949 3473 7.389232 TGCTATGTTTGATACTATGCTATGCT 58.611 34.615 0.00 0.00 0.00 3.79
2950 3474 7.601073 TGCTATGTTTGATACTATGCTATGC 57.399 36.000 0.00 0.00 0.00 3.14
2951 3475 9.212641 ACTTGCTATGTTTGATACTATGCTATG 57.787 33.333 0.00 0.00 0.00 2.23
2952 3476 9.784531 AACTTGCTATGTTTGATACTATGCTAT 57.215 29.630 0.00 0.00 0.00 2.97
2953 3477 9.261180 GAACTTGCTATGTTTGATACTATGCTA 57.739 33.333 0.00 0.00 0.00 3.49
2954 3478 7.770433 TGAACTTGCTATGTTTGATACTATGCT 59.230 33.333 0.00 0.00 0.00 3.79
2955 3479 7.919690 TGAACTTGCTATGTTTGATACTATGC 58.080 34.615 0.00 0.00 0.00 3.14
2959 3483 9.013229 TGAAATGAACTTGCTATGTTTGATACT 57.987 29.630 0.00 0.00 0.00 2.12
2960 3484 9.624697 TTGAAATGAACTTGCTATGTTTGATAC 57.375 29.630 0.00 0.00 0.00 2.24
2961 3485 9.624697 GTTGAAATGAACTTGCTATGTTTGATA 57.375 29.630 0.00 0.00 0.00 2.15
2962 3486 8.143193 TGTTGAAATGAACTTGCTATGTTTGAT 58.857 29.630 0.00 0.00 0.00 2.57
2963 3487 7.487484 TGTTGAAATGAACTTGCTATGTTTGA 58.513 30.769 0.00 0.00 0.00 2.69
2964 3488 7.095940 CCTGTTGAAATGAACTTGCTATGTTTG 60.096 37.037 0.00 0.00 0.00 2.93
2965 3489 6.925165 CCTGTTGAAATGAACTTGCTATGTTT 59.075 34.615 0.00 0.00 0.00 2.83
2966 3490 6.265196 TCCTGTTGAAATGAACTTGCTATGTT 59.735 34.615 0.00 0.00 0.00 2.71
2967 3491 5.769662 TCCTGTTGAAATGAACTTGCTATGT 59.230 36.000 0.00 0.00 0.00 2.29
2968 3492 6.088824 GTCCTGTTGAAATGAACTTGCTATG 58.911 40.000 0.00 0.00 0.00 2.23
2969 3493 5.769662 TGTCCTGTTGAAATGAACTTGCTAT 59.230 36.000 0.00 0.00 0.00 2.97
2970 3494 5.129634 TGTCCTGTTGAAATGAACTTGCTA 58.870 37.500 0.00 0.00 0.00 3.49
2971 3495 3.953612 TGTCCTGTTGAAATGAACTTGCT 59.046 39.130 0.00 0.00 0.00 3.91
2972 3496 4.305989 TGTCCTGTTGAAATGAACTTGC 57.694 40.909 0.00 0.00 0.00 4.01
2973 3497 6.857964 GTGTATGTCCTGTTGAAATGAACTTG 59.142 38.462 0.00 0.00 0.00 3.16
2974 3498 6.545666 TGTGTATGTCCTGTTGAAATGAACTT 59.454 34.615 0.00 0.00 0.00 2.66
2975 3499 6.061441 TGTGTATGTCCTGTTGAAATGAACT 58.939 36.000 0.00 0.00 0.00 3.01
2976 3500 6.312399 TGTGTATGTCCTGTTGAAATGAAC 57.688 37.500 0.00 0.00 0.00 3.18
2977 3501 6.951062 TTGTGTATGTCCTGTTGAAATGAA 57.049 33.333 0.00 0.00 0.00 2.57
2993 3517 9.613957 CGATCGAACTATCTATCTTTTGTGTAT 57.386 33.333 10.26 0.00 0.00 2.29
3015 3539 9.517609 AGTTGTATTTGTCTTAGTACATCGATC 57.482 33.333 0.00 0.00 0.00 3.69
3028 3552 7.328277 TGCACACTTTTAGTTGTATTTGTCT 57.672 32.000 0.00 0.00 0.00 3.41
3034 3558 9.677567 CAAACTATTGCACACTTTTAGTTGTAT 57.322 29.630 0.00 0.00 34.33 2.29
3060 3584 0.670854 GAGGAAGCGGTGAACTCCAC 60.671 60.000 5.89 0.00 44.95 4.02
3062 3586 1.446272 CGAGGAAGCGGTGAACTCC 60.446 63.158 7.57 2.03 0.00 3.85
3066 3590 1.470979 GCTAATCGAGGAAGCGGTGAA 60.471 52.381 0.00 0.00 0.00 3.18
3073 3597 1.070914 GGGAAGGGCTAATCGAGGAAG 59.929 57.143 0.00 0.00 0.00 3.46
3076 3600 0.764752 AGGGGAAGGGCTAATCGAGG 60.765 60.000 0.00 0.00 0.00 4.63
3105 3629 1.768482 ACCTACTGCCACCACACCA 60.768 57.895 0.00 0.00 0.00 4.17
3106 3630 1.302511 CACCTACTGCCACCACACC 60.303 63.158 0.00 0.00 0.00 4.16
3113 3637 1.071699 GGACTTTGACACCTACTGCCA 59.928 52.381 0.00 0.00 0.00 4.92
3114 3638 1.071699 TGGACTTTGACACCTACTGCC 59.928 52.381 0.00 0.00 0.00 4.85
3121 3645 1.375551 ACAACGTGGACTTTGACACC 58.624 50.000 0.00 0.00 34.18 4.16
3168 3692 2.035632 CATCCTCACCCTCTAGTGACC 58.964 57.143 0.00 0.00 41.78 4.02
3169 3693 2.955660 CTCATCCTCACCCTCTAGTGAC 59.044 54.545 0.00 0.00 41.78 3.67
3181 3705 0.692419 GGCTCCCCTTCTCATCCTCA 60.692 60.000 0.00 0.00 0.00 3.86
3186 3710 2.066999 GTCGGGCTCCCCTTCTCAT 61.067 63.158 0.00 0.00 42.67 2.90
3187 3711 2.683933 GTCGGGCTCCCCTTCTCA 60.684 66.667 0.00 0.00 42.67 3.27
3191 3715 4.332543 TCTGGTCGGGCTCCCCTT 62.333 66.667 0.00 0.00 42.67 3.95
3238 3762 4.386413 CTGAAAGTGGAGCGGCTT 57.614 55.556 2.97 0.00 0.00 4.35
3253 3777 1.007387 GAAGGCGGCCAAAACACTG 60.007 57.895 23.09 0.00 0.00 3.66
3254 3778 1.152756 AGAAGGCGGCCAAAACACT 60.153 52.632 23.09 7.70 0.00 3.55
3255 3779 1.285950 GAGAAGGCGGCCAAAACAC 59.714 57.895 23.09 5.49 0.00 3.32
3256 3780 1.901464 GGAGAAGGCGGCCAAAACA 60.901 57.895 23.09 0.00 0.00 2.83
3259 3783 1.603455 CAAGGAGAAGGCGGCCAAA 60.603 57.895 23.09 0.00 0.00 3.28
3262 3786 2.436824 GACAAGGAGAAGGCGGCC 60.437 66.667 12.11 12.11 0.00 6.13
3309 3833 3.806380 TGCAAAATTGTCAAGGCATTGT 58.194 36.364 11.36 0.00 37.68 2.71
3312 3836 2.419667 GCTGCAAAATTGTCAAGGCAT 58.580 42.857 0.00 0.00 0.00 4.40
3314 3838 0.785979 CGCTGCAAAATTGTCAAGGC 59.214 50.000 0.00 0.00 0.00 4.35
3320 3844 2.049248 CCGCCGCTGCAAAATTGT 60.049 55.556 0.00 0.00 37.32 2.71
3343 3867 2.100631 GTTGACCACGGCCGAGATG 61.101 63.158 35.90 20.38 0.00 2.90
3368 3892 3.050523 TCTCCTCCATGATGTCATCCA 57.949 47.619 10.36 0.00 33.61 3.41
3370 3894 5.481105 GAAGATCTCCTCCATGATGTCATC 58.519 45.833 5.83 5.83 33.61 2.92
3390 3914 2.122167 CCCTCGGACTCGGAGGAAG 61.122 68.421 26.80 12.40 36.49 3.46
3391 3915 2.044252 CCCTCGGACTCGGAGGAA 60.044 66.667 26.80 0.00 36.49 3.36
3422 3946 2.867472 CGGGTCGTGCAAATCCAC 59.133 61.111 0.00 0.00 0.00 4.02
3456 3980 2.446036 GGGTGGCCTAGGTCGGAT 60.446 66.667 9.28 0.00 0.00 4.18
3461 3985 2.285442 GAGGTGGGTGGCCTAGGT 60.285 66.667 11.31 0.00 36.29 3.08
3463 3987 4.162690 GCGAGGTGGGTGGCCTAG 62.163 72.222 3.32 0.00 36.29 3.02
3514 4038 3.006061 ATCGAGTTGATGGGGGTGA 57.994 52.632 0.00 0.00 35.45 4.02
3531 4055 1.066605 GTATACTCGTGCCGACACCAT 59.933 52.381 0.00 0.00 44.40 3.55
3537 4061 1.302366 ACGATGTATACTCGTGCCGA 58.698 50.000 21.54 0.00 46.76 5.54
3554 4078 2.518825 CCCTACTCCTCCCGGACG 60.519 72.222 0.73 0.00 34.92 4.79
3558 4082 2.518825 CGTCCCCTACTCCTCCCG 60.519 72.222 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.