Multiple sequence alignment - TraesCS4A01G248500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G248500 chr4A 100.000 7201 0 0 1 7201 559168933 559161733 0.000000e+00 13298.0
1 TraesCS4A01G248500 chr4A 95.349 43 2 0 3611 3653 559151969 559152011 1.300000e-07 69.4
2 TraesCS4A01G248500 chr4B 90.306 1537 94 19 4447 5969 59206234 59207729 0.000000e+00 1962.0
3 TraesCS4A01G248500 chr4B 95.960 792 22 1 2783 3564 59204532 59205323 0.000000e+00 1277.0
4 TraesCS4A01G248500 chr4B 87.895 760 63 15 3674 4411 59205496 59206248 0.000000e+00 867.0
5 TraesCS4A01G248500 chr4B 89.216 714 35 17 599 1306 59202349 59203026 0.000000e+00 854.0
6 TraesCS4A01G248500 chr4B 89.101 367 20 7 1 353 59192855 59193215 8.580000e-119 438.0
7 TraesCS4A01G248500 chr4B 81.324 589 55 25 6072 6633 59207788 59208348 1.860000e-115 427.0
8 TraesCS4A01G248500 chr4B 83.817 241 28 9 1642 1873 59203210 59203448 1.220000e-52 219.0
9 TraesCS4A01G248500 chr4B 90.625 160 13 2 2604 2763 59204384 59204541 2.040000e-50 211.0
10 TraesCS4A01G248500 chr4B 96.939 98 3 0 3555 3652 59205346 59205443 1.610000e-36 165.0
11 TraesCS4A01G248500 chr4B 92.000 50 4 0 1305 1354 580784156 580784107 3.600000e-08 71.3
12 TraesCS4A01G248500 chr4D 96.389 1080 30 3 2580 3652 40561830 40562907 0.000000e+00 1770.0
13 TraesCS4A01G248500 chr4D 94.471 1049 49 5 4715 5763 40564164 40565203 0.000000e+00 1607.0
14 TraesCS4A01G248500 chr4D 89.988 809 47 22 1432 2223 40559561 40560352 0.000000e+00 1014.0
15 TraesCS4A01G248500 chr4D 88.407 854 43 23 461 1306 40558733 40559538 0.000000e+00 977.0
16 TraesCS4A01G248500 chr4D 85.189 898 69 24 5771 6633 40565260 40566128 0.000000e+00 863.0
17 TraesCS4A01G248500 chr4D 92.759 580 34 4 3845 4420 40563298 40563873 0.000000e+00 832.0
18 TraesCS4A01G248500 chr4D 96.667 270 6 2 4415 4681 40563893 40564162 5.130000e-121 446.0
19 TraesCS4A01G248500 chr4D 92.670 191 14 0 1 191 40556991 40557181 7.120000e-70 276.0
20 TraesCS4A01G248500 chr4D 87.192 203 9 5 2299 2486 40560356 40560556 1.570000e-51 215.0
21 TraesCS4A01G248500 chr4D 91.333 150 7 2 3651 3794 40562952 40563101 4.410000e-47 200.0
22 TraesCS4A01G248500 chr4D 85.955 178 5 9 190 353 40557343 40557514 9.600000e-39 172.0
23 TraesCS4A01G248500 chr4D 91.398 93 6 1 377 467 40558607 40558699 7.580000e-25 126.0
24 TraesCS4A01G248500 chr4D 95.455 66 3 0 3798 3863 40563220 40563285 9.880000e-19 106.0
25 TraesCS4A01G248500 chr6A 92.077 568 45 0 6634 7201 215068480 215069047 0.000000e+00 800.0
26 TraesCS4A01G248500 chr3A 91.754 570 44 3 6634 7201 22567931 22568499 0.000000e+00 789.0
27 TraesCS4A01G248500 chr3A 100.000 30 0 0 1612 1641 564879477 564879448 1.000000e-03 56.5
28 TraesCS4A01G248500 chr1B 91.725 568 46 1 6634 7201 288568768 288568202 0.000000e+00 787.0
29 TraesCS4A01G248500 chr1B 90.566 53 4 1 1304 1356 530663508 530663559 1.300000e-07 69.4
30 TraesCS4A01G248500 chr1B 90.566 53 4 1 1304 1355 633039976 633040028 1.300000e-07 69.4
31 TraesCS4A01G248500 chr1B 89.091 55 5 1 1304 1357 579980005 579979951 4.660000e-07 67.6
32 TraesCS4A01G248500 chr5B 91.564 569 46 2 6634 7201 705027431 705026864 0.000000e+00 784.0
33 TraesCS4A01G248500 chr3B 91.549 568 48 0 6634 7201 820144802 820145369 0.000000e+00 784.0
34 TraesCS4A01G248500 chr3B 95.652 46 2 0 1304 1349 803051551 803051506 2.790000e-09 75.0
35 TraesCS4A01G248500 chr6D 91.419 571 44 5 6634 7201 273967341 273967909 0.000000e+00 778.0
36 TraesCS4A01G248500 chr6D 88.679 53 6 0 1304 1356 6483037 6482985 1.680000e-06 65.8
37 TraesCS4A01G248500 chr2B 91.404 570 45 4 6634 7201 798491759 798491192 0.000000e+00 778.0
38 TraesCS4A01G248500 chr7B 91.373 568 48 1 6634 7201 36961421 36960855 0.000000e+00 776.0
39 TraesCS4A01G248500 chr2A 91.146 576 45 5 6631 7201 772232533 772233107 0.000000e+00 776.0
40 TraesCS4A01G248500 chr2A 100.000 30 0 0 1612 1641 24180611 24180582 1.000000e-03 56.5
41 TraesCS4A01G248500 chr7A 93.750 48 3 0 1304 1351 49508232 49508185 1.000000e-08 73.1
42 TraesCS4A01G248500 chr5D 95.455 44 2 0 1304 1347 511817726 511817769 3.600000e-08 71.3
43 TraesCS4A01G248500 chr5D 94.737 38 2 0 1364 1401 556118758 556118721 7.800000e-05 60.2
44 TraesCS4A01G248500 chr3D 95.455 44 2 0 1304 1347 18892618 18892575 3.600000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G248500 chr4A 559161733 559168933 7200 True 13298.000000 13298 100.000000 1 7201 1 chr4A.!!$R1 7200
1 TraesCS4A01G248500 chr4B 59202349 59208348 5999 False 747.750000 1962 89.510250 599 6633 8 chr4B.!!$F2 6034
2 TraesCS4A01G248500 chr4D 40556991 40566128 9137 False 661.846154 1770 91.374846 1 6633 13 chr4D.!!$F1 6632
3 TraesCS4A01G248500 chr6A 215068480 215069047 567 False 800.000000 800 92.077000 6634 7201 1 chr6A.!!$F1 567
4 TraesCS4A01G248500 chr3A 22567931 22568499 568 False 789.000000 789 91.754000 6634 7201 1 chr3A.!!$F1 567
5 TraesCS4A01G248500 chr1B 288568202 288568768 566 True 787.000000 787 91.725000 6634 7201 1 chr1B.!!$R1 567
6 TraesCS4A01G248500 chr5B 705026864 705027431 567 True 784.000000 784 91.564000 6634 7201 1 chr5B.!!$R1 567
7 TraesCS4A01G248500 chr3B 820144802 820145369 567 False 784.000000 784 91.549000 6634 7201 1 chr3B.!!$F1 567
8 TraesCS4A01G248500 chr6D 273967341 273967909 568 False 778.000000 778 91.419000 6634 7201 1 chr6D.!!$F1 567
9 TraesCS4A01G248500 chr2B 798491192 798491759 567 True 778.000000 778 91.404000 6634 7201 1 chr2B.!!$R1 567
10 TraesCS4A01G248500 chr7B 36960855 36961421 566 True 776.000000 776 91.373000 6634 7201 1 chr7B.!!$R1 567
11 TraesCS4A01G248500 chr2A 772232533 772233107 574 False 776.000000 776 91.146000 6631 7201 1 chr2A.!!$F1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
751 2043 0.529378 CATGAAACCTGCCTTGCCTC 59.471 55.0 0.00 0.0 0.0 4.70 F
2210 3578 0.537188 ATAGTTCTGGACCTGTGCCG 59.463 55.0 0.00 0.0 0.0 5.69 F
2550 5331 0.597568 TTGGCGGCATCTGAAAACAG 59.402 50.0 14.32 0.0 0.0 3.16 F
4201 7235 0.592637 TGTGTCAATCTTTGCTGCCG 59.407 50.0 0.00 0.0 0.0 5.69 F
4712 7816 0.034616 TGCCCTTGAATTTTTGCCCG 59.965 50.0 0.00 0.0 0.0 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2377 3934 0.984995 AAGTGGTCTTCCTAGTGGCC 59.015 55.0 0.00 0.0 34.23 5.36 R
3730 6615 0.031616 ACAACACCCAAACCCCACAT 60.032 50.0 0.00 0.0 0.00 3.21 R
4410 7452 0.185175 GGAGGATTACCCCGGCAATT 59.815 55.0 0.00 0.0 36.73 2.32 R
5371 8475 0.531200 AGTAAAGGAAGAGCGTCGGG 59.469 55.0 0.00 0.0 0.00 5.14 R
6261 9418 0.118346 TAGGTTCTTGGGCCTCCTCA 59.882 55.0 4.53 0.0 36.38 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.349438 CGGAACCAACAACAATGTCTCG 60.349 50.000 0.00 0.00 39.40 4.04
64 65 5.067153 ACAACAATGTCTCGTCATTTTTCCA 59.933 36.000 0.00 0.00 33.41 3.53
65 66 5.108385 ACAATGTCTCGTCATTTTTCCAC 57.892 39.130 0.00 0.00 36.10 4.02
125 126 9.745018 AATCTCCATCAAACTTGGTATATATGG 57.255 33.333 0.00 0.00 35.64 2.74
168 169 9.814899 CCCTGCAAAAACAATGTAATATTATCA 57.185 29.630 0.00 0.00 0.00 2.15
182 183 9.428097 TGTAATATTATCACTCTGCATGCTAAG 57.572 33.333 20.33 17.53 0.00 2.18
225 389 6.705302 TCTCAAGAGAAACTTAGACATGCAT 58.295 36.000 0.00 0.00 37.03 3.96
226 390 6.592994 TCTCAAGAGAAACTTAGACATGCATG 59.407 38.462 25.09 25.09 37.03 4.06
229 407 4.940046 AGAGAAACTTAGACATGCATGGTG 59.060 41.667 29.41 16.04 0.00 4.17
241 419 3.658757 TGCATGGTGCTTTTTAGAACC 57.341 42.857 3.41 0.00 45.31 3.62
242 420 3.230134 TGCATGGTGCTTTTTAGAACCT 58.770 40.909 4.05 0.00 45.31 3.50
247 425 4.324267 TGGTGCTTTTTAGAACCTCTAGC 58.676 43.478 4.05 0.00 38.35 3.42
254 432 5.871396 TTTTAGAACCTCTAGCGGATCAT 57.129 39.130 5.58 0.00 29.56 2.45
263 441 2.098426 TAGCGGATCATGCATGCGGA 62.098 55.000 22.25 13.71 45.99 5.54
353 531 5.584649 GTGGACATTTAAGATGGTCGATCAA 59.415 40.000 0.60 0.00 32.86 2.57
354 532 6.260936 GTGGACATTTAAGATGGTCGATCAAT 59.739 38.462 0.60 0.00 32.86 2.57
356 534 8.156820 TGGACATTTAAGATGGTCGATCAATAT 58.843 33.333 0.60 0.00 32.86 1.28
357 535 9.003658 GGACATTTAAGATGGTCGATCAATATT 57.996 33.333 0.60 0.25 32.86 1.28
360 538 6.801539 TTAAGATGGTCGATCAATATTGCC 57.198 37.500 10.76 6.36 32.86 4.52
375 1493 1.422531 TTGCCCACTGGAATTTTGCT 58.577 45.000 0.00 0.00 0.00 3.91
379 1497 2.675889 GCCCACTGGAATTTTGCTCATG 60.676 50.000 0.00 0.00 0.00 3.07
399 1517 2.750166 TGTGTGTTTGTGGGTGTAGTTG 59.250 45.455 0.00 0.00 0.00 3.16
406 1524 1.890041 TGGGTGTAGTTGTGTGCGC 60.890 57.895 0.00 0.00 0.00 6.09
408 1526 2.241880 GGTGTAGTTGTGTGCGCGT 61.242 57.895 8.43 0.00 0.00 6.01
432 1681 2.208431 CCGATTCTGTCCAGCATCTTC 58.792 52.381 5.60 0.00 30.49 2.87
463 1712 6.112734 AGCAATTTGTATTCGAGTGTCCATA 58.887 36.000 0.00 0.00 0.00 2.74
467 1716 4.729227 TGTATTCGAGTGTCCATAAGCA 57.271 40.909 0.00 0.00 0.00 3.91
469 1718 6.399639 TGTATTCGAGTGTCCATAAGCATA 57.600 37.500 0.00 0.00 0.00 3.14
470 1719 6.213677 TGTATTCGAGTGTCCATAAGCATAC 58.786 40.000 0.00 0.00 0.00 2.39
479 1770 6.818644 AGTGTCCATAAGCATACTTAGTGTTG 59.181 38.462 0.00 0.00 41.60 3.33
494 1785 3.279434 AGTGTTGGAATTATCGGCCTTC 58.721 45.455 0.00 0.00 0.00 3.46
517 1808 3.504134 CGTGTCATATTTCACACCCCAAA 59.496 43.478 7.51 0.00 39.92 3.28
518 1809 4.614993 CGTGTCATATTTCACACCCCAAAC 60.615 45.833 7.51 0.00 39.92 2.93
519 1810 3.504134 TGTCATATTTCACACCCCAAACG 59.496 43.478 0.00 0.00 0.00 3.60
520 1811 2.490115 TCATATTTCACACCCCAAACGC 59.510 45.455 0.00 0.00 0.00 4.84
521 1812 0.875728 TATTTCACACCCCAAACGCG 59.124 50.000 3.53 3.53 0.00 6.01
522 1813 1.104577 ATTTCACACCCCAAACGCGT 61.105 50.000 5.58 5.58 0.00 6.01
523 1814 1.994507 TTTCACACCCCAAACGCGTG 61.995 55.000 14.98 1.17 0.00 5.34
524 1815 4.622456 CACACCCCAAACGCGTGC 62.622 66.667 14.98 0.00 0.00 5.34
532 1823 1.206115 CCAAACGCGTGCTTTCCAAC 61.206 55.000 14.98 0.00 0.00 3.77
543 1834 4.024048 CGTGCTTTCCAACACTAGTGAAAT 60.024 41.667 29.30 11.82 34.58 2.17
557 1848 7.488471 ACACTAGTGAAATATTGCGAACTACTC 59.512 37.037 29.30 0.00 0.00 2.59
558 1849 6.979238 ACTAGTGAAATATTGCGAACTACTCC 59.021 38.462 0.00 0.00 0.00 3.85
559 1850 4.804139 AGTGAAATATTGCGAACTACTCCG 59.196 41.667 0.00 0.00 0.00 4.63
560 1851 4.565564 GTGAAATATTGCGAACTACTCCGT 59.434 41.667 0.00 0.00 0.00 4.69
561 1852 5.745294 GTGAAATATTGCGAACTACTCCGTA 59.255 40.000 0.00 0.00 0.00 4.02
562 1853 5.745294 TGAAATATTGCGAACTACTCCGTAC 59.255 40.000 0.00 0.00 0.00 3.67
563 1854 5.511234 AATATTGCGAACTACTCCGTACT 57.489 39.130 0.00 0.00 0.00 2.73
564 1855 6.624352 AATATTGCGAACTACTCCGTACTA 57.376 37.500 0.00 0.00 0.00 1.82
565 1856 4.970662 ATTGCGAACTACTCCGTACTAA 57.029 40.909 0.00 0.00 0.00 2.24
566 1857 4.970662 TTGCGAACTACTCCGTACTAAT 57.029 40.909 0.00 0.00 0.00 1.73
573 1864 7.954786 GCGAACTACTCCGTACTAATTAGTATC 59.045 40.741 24.46 17.33 40.55 2.24
578 1869 6.763355 ACTCCGTACTAATTAGTATCGAGGA 58.237 40.000 31.07 27.81 40.55 3.71
583 1874 6.962116 CGTACTAATTAGTATCGAGGATGCTG 59.038 42.308 24.46 5.54 40.55 4.41
586 1877 7.371936 ACTAATTAGTATCGAGGATGCTGAAC 58.628 38.462 16.60 0.00 35.86 3.18
595 1886 4.101585 TCGAGGATGCTGAACAAGGATATT 59.898 41.667 0.00 0.00 37.02 1.28
596 1887 4.818546 CGAGGATGCTGAACAAGGATATTT 59.181 41.667 0.00 0.00 37.02 1.40
597 1888 5.297776 CGAGGATGCTGAACAAGGATATTTT 59.702 40.000 0.00 0.00 37.02 1.82
598 1889 6.461110 AGGATGCTGAACAAGGATATTTTG 57.539 37.500 0.00 0.78 37.02 2.44
599 1890 5.361857 AGGATGCTGAACAAGGATATTTTGG 59.638 40.000 0.00 0.00 37.02 3.28
600 1891 5.127682 GGATGCTGAACAAGGATATTTTGGT 59.872 40.000 6.05 0.00 37.02 3.67
623 1914 8.998814 TGGTGAATTACAAGAGATATTTAGGGA 58.001 33.333 0.00 0.00 0.00 4.20
644 1935 1.718757 GCTAGCTGCCAATTCCCACG 61.719 60.000 7.70 0.00 35.15 4.94
655 1946 2.080286 ATTCCCACGTCACTTCTTCG 57.920 50.000 0.00 0.00 0.00 3.79
656 1947 1.034356 TTCCCACGTCACTTCTTCGA 58.966 50.000 0.00 0.00 0.00 3.71
702 1994 3.147629 AGCAAGATTAGCTCCATGCATC 58.852 45.455 0.00 0.00 45.94 3.91
705 1997 4.942483 GCAAGATTAGCTCCATGCATCTAT 59.058 41.667 0.00 0.00 45.94 1.98
706 1998 5.163744 GCAAGATTAGCTCCATGCATCTATG 60.164 44.000 0.00 0.00 45.94 2.23
708 2000 4.535294 AGATTAGCTCCATGCATCTATGGT 59.465 41.667 0.00 0.00 46.23 3.55
711 2003 1.001293 GCTCCATGCATCTATGGTCGA 59.999 52.381 0.00 0.00 46.23 4.20
715 2007 2.265683 CATGCATCTATGGTCGATCCG 58.734 52.381 0.00 0.00 39.52 4.18
728 2020 1.939934 TCGATCCGGACAATTTCATGC 59.060 47.619 6.12 0.00 0.00 4.06
748 2040 4.584688 GCATGAAACCTGCCTTGC 57.415 55.556 0.00 0.00 33.44 4.01
750 2042 1.538687 GCATGAAACCTGCCTTGCCT 61.539 55.000 0.00 0.00 33.44 4.75
751 2043 0.529378 CATGAAACCTGCCTTGCCTC 59.471 55.000 0.00 0.00 0.00 4.70
775 2078 1.814394 ACGCACGGTACAGATTAGTCA 59.186 47.619 0.00 0.00 0.00 3.41
782 2085 3.066900 CGGTACAGATTAGTCAGGGACAG 59.933 52.174 0.00 0.00 34.60 3.51
783 2086 4.024670 GGTACAGATTAGTCAGGGACAGT 58.975 47.826 0.00 0.00 34.60 3.55
784 2087 4.466726 GGTACAGATTAGTCAGGGACAGTT 59.533 45.833 0.00 0.00 34.60 3.16
785 2088 5.046520 GGTACAGATTAGTCAGGGACAGTTT 60.047 44.000 0.00 0.00 34.60 2.66
786 2089 5.568620 ACAGATTAGTCAGGGACAGTTTT 57.431 39.130 0.00 0.00 34.60 2.43
787 2090 5.941788 ACAGATTAGTCAGGGACAGTTTTT 58.058 37.500 0.00 0.00 34.60 1.94
788 2091 5.998363 ACAGATTAGTCAGGGACAGTTTTTC 59.002 40.000 0.00 0.00 34.60 2.29
789 2092 6.183361 ACAGATTAGTCAGGGACAGTTTTTCT 60.183 38.462 0.00 0.00 34.60 2.52
790 2093 6.712547 CAGATTAGTCAGGGACAGTTTTTCTT 59.287 38.462 0.00 0.00 34.60 2.52
791 2094 7.229506 CAGATTAGTCAGGGACAGTTTTTCTTT 59.770 37.037 0.00 0.00 34.60 2.52
792 2095 7.780271 AGATTAGTCAGGGACAGTTTTTCTTTT 59.220 33.333 0.00 0.00 34.60 2.27
793 2096 5.582689 AGTCAGGGACAGTTTTTCTTTTG 57.417 39.130 0.00 0.00 34.60 2.44
794 2097 5.261216 AGTCAGGGACAGTTTTTCTTTTGA 58.739 37.500 0.00 0.00 34.60 2.69
795 2098 5.125578 AGTCAGGGACAGTTTTTCTTTTGAC 59.874 40.000 0.00 0.00 34.60 3.18
796 2099 5.013547 TCAGGGACAGTTTTTCTTTTGACA 58.986 37.500 0.00 0.00 0.00 3.58
797 2100 5.478679 TCAGGGACAGTTTTTCTTTTGACAA 59.521 36.000 0.00 0.00 0.00 3.18
798 2101 5.807011 CAGGGACAGTTTTTCTTTTGACAAG 59.193 40.000 0.00 0.00 0.00 3.16
799 2102 5.714806 AGGGACAGTTTTTCTTTTGACAAGA 59.285 36.000 0.00 0.00 0.00 3.02
800 2103 6.381133 AGGGACAGTTTTTCTTTTGACAAGAT 59.619 34.615 0.00 0.00 0.00 2.40
801 2104 7.041721 GGGACAGTTTTTCTTTTGACAAGATT 58.958 34.615 0.00 0.00 0.00 2.40
802 2105 8.194769 GGGACAGTTTTTCTTTTGACAAGATTA 58.805 33.333 0.00 0.00 0.00 1.75
803 2106 9.237846 GGACAGTTTTTCTTTTGACAAGATTAG 57.762 33.333 0.00 0.00 0.00 1.73
804 2107 9.788960 GACAGTTTTTCTTTTGACAAGATTAGT 57.211 29.630 0.00 0.00 0.00 2.24
805 2108 9.788960 ACAGTTTTTCTTTTGACAAGATTAGTC 57.211 29.630 0.00 0.00 36.55 2.59
806 2109 9.787532 CAGTTTTTCTTTTGACAAGATTAGTCA 57.212 29.630 0.00 0.00 43.72 3.41
808 2111 9.237846 GTTTTTCTTTTGACAAGATTAGTCAGG 57.762 33.333 0.00 0.00 45.72 3.86
809 2112 7.510549 TTTCTTTTGACAAGATTAGTCAGGG 57.489 36.000 0.00 0.00 45.72 4.45
810 2113 6.433847 TCTTTTGACAAGATTAGTCAGGGA 57.566 37.500 0.00 0.00 45.72 4.20
811 2114 6.231211 TCTTTTGACAAGATTAGTCAGGGAC 58.769 40.000 0.00 0.00 45.72 4.46
812 2115 5.560722 TTTGACAAGATTAGTCAGGGACA 57.439 39.130 0.00 0.00 45.72 4.02
829 2132 7.715249 GTCAGGGACAGTTAATTAAGCATATCA 59.285 37.037 0.00 0.00 32.09 2.15
893 2196 4.075793 AGGACCGGCTAGCTCCCA 62.076 66.667 15.72 0.00 0.00 4.37
942 2245 4.016444 TCAGGTCAAAAGAACAAAGCACT 58.984 39.130 0.00 0.00 0.00 4.40
1192 2496 2.271800 CCACTCTCGCTGGATGTAAAC 58.728 52.381 0.00 0.00 0.00 2.01
1230 2537 9.301153 CATTTAACTGTCTATTTATTTGCCCAC 57.699 33.333 0.00 0.00 0.00 4.61
1247 2557 3.554129 GCCCACCTGAATAAACCAACAAC 60.554 47.826 0.00 0.00 0.00 3.32
1264 2574 5.149273 CAACAACACTATCATGTCTGCAAC 58.851 41.667 0.00 0.00 30.55 4.17
1270 2580 2.275134 ATCATGTCTGCAACACCACA 57.725 45.000 4.23 0.00 41.75 4.17
1289 2599 2.238646 ACATCCGCCTCATTGGTCTAAA 59.761 45.455 0.00 0.00 38.35 1.85
1306 2616 5.196695 GTCTAAAATTGCCTTCCCTGAGAT 58.803 41.667 0.00 0.00 0.00 2.75
1309 2619 7.012799 GTCTAAAATTGCCTTCCCTGAGATAAG 59.987 40.741 0.00 0.00 0.00 1.73
1310 2620 3.872459 ATTGCCTTCCCTGAGATAAGG 57.128 47.619 8.03 8.03 42.27 2.69
1311 2621 2.568546 TGCCTTCCCTGAGATAAGGA 57.431 50.000 14.52 0.00 42.01 3.36
1312 2622 2.402564 TGCCTTCCCTGAGATAAGGAG 58.597 52.381 14.52 0.00 42.01 3.69
1313 2623 2.293184 TGCCTTCCCTGAGATAAGGAGT 60.293 50.000 14.52 0.00 42.01 3.85
1314 2624 3.052109 TGCCTTCCCTGAGATAAGGAGTA 60.052 47.826 14.52 0.90 42.01 2.59
1315 2625 3.967987 GCCTTCCCTGAGATAAGGAGTAA 59.032 47.826 14.52 0.00 42.01 2.24
1316 2626 4.202274 GCCTTCCCTGAGATAAGGAGTAAC 60.202 50.000 14.52 0.00 42.01 2.50
1319 2629 6.463614 CCTTCCCTGAGATAAGGAGTAACATG 60.464 46.154 6.89 0.00 42.01 3.21
1320 2630 5.529289 TCCCTGAGATAAGGAGTAACATGT 58.471 41.667 0.00 0.00 40.02 3.21
1324 2634 6.406692 TGAGATAAGGAGTAACATGTAGCC 57.593 41.667 0.00 0.00 0.00 3.93
1326 2636 6.040955 TGAGATAAGGAGTAACATGTAGCCTG 59.959 42.308 0.00 0.00 0.00 4.85
1327 2637 6.136857 AGATAAGGAGTAACATGTAGCCTGA 58.863 40.000 0.00 0.00 0.00 3.86
1328 2638 4.744795 AAGGAGTAACATGTAGCCTGAG 57.255 45.455 0.00 0.00 0.00 3.35
1329 2639 2.432510 AGGAGTAACATGTAGCCTGAGC 59.567 50.000 0.00 0.00 40.32 4.26
1345 2655 3.838244 TGAGCTACAGAAAACCACACT 57.162 42.857 0.00 0.00 0.00 3.55
1346 2656 3.728845 TGAGCTACAGAAAACCACACTC 58.271 45.455 0.00 0.00 0.00 3.51
1347 2657 3.133901 TGAGCTACAGAAAACCACACTCA 59.866 43.478 0.00 0.00 0.00 3.41
1348 2658 4.202357 TGAGCTACAGAAAACCACACTCAT 60.202 41.667 0.00 0.00 0.00 2.90
1349 2659 4.718961 AGCTACAGAAAACCACACTCATT 58.281 39.130 0.00 0.00 0.00 2.57
1350 2660 5.133221 AGCTACAGAAAACCACACTCATTT 58.867 37.500 0.00 0.00 0.00 2.32
1351 2661 5.239525 AGCTACAGAAAACCACACTCATTTC 59.760 40.000 0.00 0.00 33.13 2.17
1352 2662 5.239525 GCTACAGAAAACCACACTCATTTCT 59.760 40.000 0.00 0.00 41.47 2.52
1353 2663 6.238759 GCTACAGAAAACCACACTCATTTCTT 60.239 38.462 0.00 0.00 39.43 2.52
1354 2664 6.530019 ACAGAAAACCACACTCATTTCTTT 57.470 33.333 0.00 0.00 39.43 2.52
1355 2665 6.935167 ACAGAAAACCACACTCATTTCTTTT 58.065 32.000 0.00 0.00 39.43 2.27
1356 2666 7.035612 ACAGAAAACCACACTCATTTCTTTTC 58.964 34.615 0.00 0.00 39.43 2.29
1357 2667 7.093771 ACAGAAAACCACACTCATTTCTTTTCT 60.094 33.333 0.00 0.00 39.43 2.52
1358 2668 7.761249 CAGAAAACCACACTCATTTCTTTTCTT 59.239 33.333 0.00 0.00 39.43 2.52
1359 2669 8.314021 AGAAAACCACACTCATTTCTTTTCTTT 58.686 29.630 0.00 0.00 38.59 2.52
1360 2670 7.832503 AAACCACACTCATTTCTTTTCTTTG 57.167 32.000 0.00 0.00 0.00 2.77
1361 2671 5.351458 ACCACACTCATTTCTTTTCTTTGC 58.649 37.500 0.00 0.00 0.00 3.68
1362 2672 4.442073 CCACACTCATTTCTTTTCTTTGCG 59.558 41.667 0.00 0.00 0.00 4.85
1363 2673 4.044426 ACACTCATTTCTTTTCTTTGCGC 58.956 39.130 0.00 0.00 0.00 6.09
1364 2674 4.043750 CACTCATTTCTTTTCTTTGCGCA 58.956 39.130 5.66 5.66 0.00 6.09
1365 2675 4.503734 CACTCATTTCTTTTCTTTGCGCAA 59.496 37.500 21.02 21.02 0.00 4.85
1366 2676 5.005586 CACTCATTTCTTTTCTTTGCGCAAA 59.994 36.000 31.75 31.75 0.00 3.68
1367 2677 5.232838 ACTCATTTCTTTTCTTTGCGCAAAG 59.767 36.000 43.08 43.08 46.82 2.77
1368 2678 5.108517 TCATTTCTTTTCTTTGCGCAAAGT 58.891 33.333 44.55 29.17 45.88 2.66
1369 2679 5.580297 TCATTTCTTTTCTTTGCGCAAAGTT 59.420 32.000 44.55 25.16 45.88 2.66
1370 2680 5.448926 TTTCTTTTCTTTGCGCAAAGTTC 57.551 34.783 44.55 4.88 45.88 3.01
1371 2681 4.370364 TCTTTTCTTTGCGCAAAGTTCT 57.630 36.364 44.55 0.00 45.88 3.01
1372 2682 4.743493 TCTTTTCTTTGCGCAAAGTTCTT 58.257 34.783 44.55 0.00 45.88 2.52
1373 2683 5.167845 TCTTTTCTTTGCGCAAAGTTCTTT 58.832 33.333 44.55 0.00 45.88 2.52
1374 2684 5.637387 TCTTTTCTTTGCGCAAAGTTCTTTT 59.363 32.000 44.55 0.00 45.88 2.27
1375 2685 4.838665 TTCTTTGCGCAAAGTTCTTTTG 57.161 36.364 44.55 27.83 45.88 2.44
1376 2686 3.843999 TCTTTGCGCAAAGTTCTTTTGT 58.156 36.364 44.55 0.00 46.35 2.83
1377 2687 4.987832 TCTTTGCGCAAAGTTCTTTTGTA 58.012 34.783 44.55 28.58 46.35 2.41
1378 2688 5.034152 TCTTTGCGCAAAGTTCTTTTGTAG 58.966 37.500 44.55 26.59 46.35 2.74
1379 2689 2.726633 TGCGCAAAGTTCTTTTGTAGC 58.273 42.857 8.16 12.01 46.35 3.58
1380 2690 2.357637 TGCGCAAAGTTCTTTTGTAGCT 59.642 40.909 8.16 0.00 46.35 3.32
1381 2691 2.973879 GCGCAAAGTTCTTTTGTAGCTC 59.026 45.455 0.30 0.00 46.35 4.09
1382 2692 3.548014 GCGCAAAGTTCTTTTGTAGCTCA 60.548 43.478 0.30 0.00 46.35 4.26
1383 2693 4.214437 CGCAAAGTTCTTTTGTAGCTCAG 58.786 43.478 0.00 0.00 46.35 3.35
1384 2694 4.540824 GCAAAGTTCTTTTGTAGCTCAGG 58.459 43.478 0.00 0.00 46.35 3.86
1385 2695 4.540824 CAAAGTTCTTTTGTAGCTCAGGC 58.459 43.478 0.00 0.00 41.02 4.85
1386 2696 4.276926 CAAAGTTCTTTTGTAGCTCAGGCT 59.723 41.667 0.00 0.00 43.26 4.58
1387 2697 5.470098 CAAAGTTCTTTTGTAGCTCAGGCTA 59.530 40.000 0.00 0.00 42.80 3.93
1397 2707 1.383523 GCTCAGGCTACATGAAACCC 58.616 55.000 0.00 0.00 35.22 4.11
1398 2708 2.019156 GCTCAGGCTACATGAAACCCC 61.019 57.143 0.00 0.00 35.22 4.95
1399 2709 1.561542 CTCAGGCTACATGAAACCCCT 59.438 52.381 0.00 0.00 0.00 4.79
1400 2710 1.992557 TCAGGCTACATGAAACCCCTT 59.007 47.619 0.00 0.00 0.00 3.95
1401 2711 2.378547 TCAGGCTACATGAAACCCCTTT 59.621 45.455 0.00 0.00 0.00 3.11
1402 2712 3.165071 CAGGCTACATGAAACCCCTTTT 58.835 45.455 0.00 0.00 0.00 2.27
1403 2713 3.578282 CAGGCTACATGAAACCCCTTTTT 59.422 43.478 0.00 0.00 0.00 1.94
1404 2714 3.578282 AGGCTACATGAAACCCCTTTTTG 59.422 43.478 0.00 0.00 0.00 2.44
1405 2715 3.576550 GGCTACATGAAACCCCTTTTTGA 59.423 43.478 0.00 0.00 0.00 2.69
1406 2716 4.039852 GGCTACATGAAACCCCTTTTTGAA 59.960 41.667 0.00 0.00 0.00 2.69
1407 2717 5.454045 GGCTACATGAAACCCCTTTTTGAAA 60.454 40.000 0.00 0.00 0.00 2.69
1408 2718 6.052360 GCTACATGAAACCCCTTTTTGAAAA 58.948 36.000 0.00 0.00 0.00 2.29
1409 2719 6.018262 GCTACATGAAACCCCTTTTTGAAAAC 60.018 38.462 0.00 0.00 0.00 2.43
1410 2720 5.189928 ACATGAAACCCCTTTTTGAAAACC 58.810 37.500 0.00 0.00 0.00 3.27
1411 2721 4.910458 TGAAACCCCTTTTTGAAAACCA 57.090 36.364 0.00 0.00 0.00 3.67
1412 2722 4.580868 TGAAACCCCTTTTTGAAAACCAC 58.419 39.130 0.00 0.00 0.00 4.16
1413 2723 4.041691 TGAAACCCCTTTTTGAAAACCACA 59.958 37.500 0.00 0.00 0.00 4.17
1414 2724 3.620427 ACCCCTTTTTGAAAACCACAC 57.380 42.857 0.00 0.00 0.00 3.82
1415 2725 3.178046 ACCCCTTTTTGAAAACCACACT 58.822 40.909 0.00 0.00 0.00 3.55
1416 2726 3.196901 ACCCCTTTTTGAAAACCACACTC 59.803 43.478 0.00 0.00 0.00 3.51
1417 2727 3.196685 CCCCTTTTTGAAAACCACACTCA 59.803 43.478 0.00 0.00 0.00 3.41
1418 2728 4.141733 CCCCTTTTTGAAAACCACACTCAT 60.142 41.667 0.00 0.00 0.00 2.90
1419 2729 5.427378 CCCTTTTTGAAAACCACACTCATT 58.573 37.500 0.00 0.00 0.00 2.57
1420 2730 5.879777 CCCTTTTTGAAAACCACACTCATTT 59.120 36.000 0.00 0.00 0.00 2.32
1421 2731 6.037062 CCCTTTTTGAAAACCACACTCATTTC 59.963 38.462 0.00 0.00 33.48 2.17
1422 2732 6.818142 CCTTTTTGAAAACCACACTCATTTCT 59.182 34.615 0.00 0.00 33.90 2.52
1423 2733 7.334171 CCTTTTTGAAAACCACACTCATTTCTT 59.666 33.333 0.00 0.00 33.90 2.52
1424 2734 8.614469 TTTTTGAAAACCACACTCATTTCTTT 57.386 26.923 0.00 0.00 33.90 2.52
1425 2735 7.593875 TTTGAAAACCACACTCATTTCTTTG 57.406 32.000 0.00 0.00 33.90 2.77
1426 2736 6.522625 TGAAAACCACACTCATTTCTTTGA 57.477 33.333 0.00 0.00 33.90 2.69
1427 2737 7.111247 TGAAAACCACACTCATTTCTTTGAT 57.889 32.000 0.00 0.00 33.90 2.57
1428 2738 7.202526 TGAAAACCACACTCATTTCTTTGATC 58.797 34.615 0.00 0.00 33.90 2.92
1429 2739 5.362556 AACCACACTCATTTCTTTGATCG 57.637 39.130 0.00 0.00 0.00 3.69
1430 2740 4.641396 ACCACACTCATTTCTTTGATCGA 58.359 39.130 0.00 0.00 0.00 3.59
1462 2772 7.716560 TCATGTCCATGAGAAATTGTATGTAGG 59.283 37.037 5.88 0.00 42.42 3.18
1483 2793 4.081309 AGGGACATGCATCAATGAAAAAGG 60.081 41.667 0.00 0.00 0.00 3.11
1498 2809 4.020662 TGAAAAAGGAAACAACCAGCAACT 60.021 37.500 0.00 0.00 0.00 3.16
1526 2842 2.011222 CACACGTTGGTACTTGGTTGT 58.989 47.619 0.00 0.00 0.00 3.32
1629 2952 8.977267 TTTTAAGGGGCGCTTTATATTACTTA 57.023 30.769 22.38 0.00 0.00 2.24
1710 3037 6.202570 TGTTTTGATAACATGCTTTTGGCTTC 59.797 34.615 0.00 0.00 42.39 3.86
1735 3062 4.041567 TCCTTTTCAGCTCTACCAATCACA 59.958 41.667 0.00 0.00 0.00 3.58
1743 3070 3.070159 GCTCTACCAATCACATGCCTCTA 59.930 47.826 0.00 0.00 0.00 2.43
1778 3105 8.498575 TGTATTTCATGGTATGTATTTCCCTGA 58.501 33.333 0.00 0.00 0.00 3.86
1904 3266 5.775686 TCAATTGCTCATTTTTCAGGTCAG 58.224 37.500 0.00 0.00 0.00 3.51
1906 3268 6.489700 TCAATTGCTCATTTTTCAGGTCAGTA 59.510 34.615 0.00 0.00 0.00 2.74
1958 3322 9.392021 GCTCTGCTTTTAAATTCATAATAGAGC 57.608 33.333 0.00 0.00 43.37 4.09
1984 3348 1.952193 CAGTTTTTGCCCCCACTTTG 58.048 50.000 0.00 0.00 0.00 2.77
1985 3349 1.209261 CAGTTTTTGCCCCCACTTTGT 59.791 47.619 0.00 0.00 0.00 2.83
2012 3380 5.883503 TTTTTAACGCTAGTTACCCCATG 57.116 39.130 0.00 0.00 42.01 3.66
2027 3395 7.604657 TTACCCCATGTAACAGTTTTCATTT 57.395 32.000 0.00 0.00 34.50 2.32
2132 3500 6.749923 AGGACAGATCAATTTCTAAACTGC 57.250 37.500 0.00 0.00 0.00 4.40
2133 3501 6.479884 AGGACAGATCAATTTCTAAACTGCT 58.520 36.000 0.00 0.00 0.00 4.24
2154 3522 9.461312 ACTGCTATTTGAATGGTGAGTAATTAA 57.539 29.630 0.00 0.00 0.00 1.40
2210 3578 0.537188 ATAGTTCTGGACCTGTGCCG 59.463 55.000 0.00 0.00 0.00 5.69
2229 3597 3.372954 CCGTTGAAAAACGTTATTGGCA 58.627 40.909 0.00 0.00 44.04 4.92
2234 3602 7.198967 CGTTGAAAAACGTTATTGGCACAAAC 61.199 38.462 0.00 0.00 41.97 2.93
2283 3837 8.534954 TTACTTGAGGAAGTACATGCTAGTAT 57.465 34.615 3.93 0.00 43.09 2.12
2290 3844 9.250624 GAGGAAGTACATGCTAGTATTACTTTG 57.749 37.037 19.22 3.68 34.00 2.77
2342 3898 9.585369 TCCATGAACTATATTTTTATGCCATGA 57.415 29.630 0.00 0.00 31.99 3.07
2377 3934 8.534333 TTATTTGTAGAAGTACTGAACTGCTG 57.466 34.615 0.00 0.00 44.57 4.41
2474 4045 7.880160 TCCATTTAGAAAACACATATCTGGG 57.120 36.000 0.00 0.00 0.00 4.45
2516 5297 5.221048 CCAGAAGGTTTCGAAATGTTGACTT 60.221 40.000 14.69 11.20 34.02 3.01
2537 5318 0.877071 GCATATCCTGACATTGGCGG 59.123 55.000 0.00 0.00 0.00 6.13
2550 5331 0.597568 TTGGCGGCATCTGAAAACAG 59.402 50.000 14.32 0.00 0.00 3.16
2559 5340 3.688185 GCATCTGAAAACAGCAGAGATGA 59.312 43.478 10.70 0.00 44.75 2.92
2564 5345 6.705302 TCTGAAAACAGCAGAGATGAAGTAT 58.295 36.000 0.00 0.00 37.46 2.12
2565 5346 6.815641 TCTGAAAACAGCAGAGATGAAGTATC 59.184 38.462 0.00 0.00 37.46 2.24
2567 5348 7.164122 TGAAAACAGCAGAGATGAAGTATCTT 58.836 34.615 0.00 0.00 46.12 2.40
2568 5349 7.663081 TGAAAACAGCAGAGATGAAGTATCTTT 59.337 33.333 0.00 0.00 46.12 2.52
2569 5350 7.992754 AAACAGCAGAGATGAAGTATCTTTT 57.007 32.000 0.00 0.00 46.12 2.27
2570 5351 7.992754 AACAGCAGAGATGAAGTATCTTTTT 57.007 32.000 0.00 0.00 46.12 1.94
2601 5382 9.190317 TGCAAAGAGAGATGAAGTATCTTACTA 57.810 33.333 0.00 0.00 46.12 1.82
2606 5387 7.386848 AGAGAGATGAAGTATCTTACTAGTCGC 59.613 40.741 0.00 0.00 46.12 5.19
2712 5493 0.913934 TACCTGGCAGATTGCTCCCA 60.914 55.000 17.94 0.00 44.28 4.37
2765 5546 7.472543 CAAAACTTCTCTAAATGGGGTAATCG 58.527 38.462 0.00 0.00 0.00 3.34
2766 5547 5.291905 ACTTCTCTAAATGGGGTAATCGG 57.708 43.478 0.00 0.00 0.00 4.18
3145 5936 5.353956 GTGTCATGCCACACATATTTAGACA 59.646 40.000 11.69 0.00 45.25 3.41
3301 6092 8.682936 AAGTGTGATATGGATTCTAATTCCAC 57.317 34.615 0.00 0.00 36.24 4.02
3564 6362 8.871629 TGTTGGGTATGTGATAACATAAACTT 57.128 30.769 4.35 0.00 34.75 2.66
3662 6538 4.679373 TCTTGAGCACCATAATCCTCTC 57.321 45.455 0.00 0.00 0.00 3.20
3667 6543 1.871080 CACCATAATCCTCTCGGTGC 58.129 55.000 0.00 0.00 40.60 5.01
3825 6825 3.814842 ACTTGTGTGATCGAAATGAAGCA 59.185 39.130 0.00 0.00 0.00 3.91
3893 6924 4.145052 AGTTTCAACTCTTGGATCAACCC 58.855 43.478 0.00 0.00 32.86 4.11
3898 6929 4.288366 TCAACTCTTGGATCAACCCACATA 59.712 41.667 0.00 0.00 35.62 2.29
3899 6930 4.494091 ACTCTTGGATCAACCCACATAG 57.506 45.455 0.00 0.00 35.62 2.23
3900 6931 3.846588 ACTCTTGGATCAACCCACATAGT 59.153 43.478 0.00 0.00 35.62 2.12
3914 6945 6.171213 ACCCACATAGTACTCTTTTTGCTAC 58.829 40.000 0.00 0.00 0.00 3.58
3931 6962 3.244735 TGCTACTTATGTTGGGCTGAACA 60.245 43.478 5.33 5.33 40.08 3.18
3941 6972 4.771577 TGTTGGGCTGAACATGTTATTCAT 59.228 37.500 11.95 0.00 35.57 2.57
3986 7017 7.311408 ACAAAAATAAAGAGATGAGCTGCTTC 58.689 34.615 2.53 0.00 0.00 3.86
4006 7037 9.741647 CTGCTTCCATTTCCTAATTTCTTTATC 57.258 33.333 0.00 0.00 0.00 1.75
4201 7235 0.592637 TGTGTCAATCTTTGCTGCCG 59.407 50.000 0.00 0.00 0.00 5.69
4250 7289 4.277672 TCCGGTATGTACAGAAGCACTATC 59.722 45.833 0.00 0.00 0.00 2.08
4251 7290 4.037565 CCGGTATGTACAGAAGCACTATCA 59.962 45.833 0.33 0.00 0.00 2.15
4252 7291 5.279006 CCGGTATGTACAGAAGCACTATCAT 60.279 44.000 0.33 0.00 0.00 2.45
4253 7292 5.631096 CGGTATGTACAGAAGCACTATCATG 59.369 44.000 0.33 0.00 0.00 3.07
4264 7305 3.273434 GCACTATCATGCCACTTCTGAA 58.727 45.455 0.00 0.00 39.86 3.02
4294 7335 7.531857 TTCTAGGCATATGTTTTTGTGGAAA 57.468 32.000 4.29 0.00 0.00 3.13
4347 7389 6.171213 GCTAATACGAAAATACCCTGCCTAT 58.829 40.000 0.00 0.00 0.00 2.57
4416 7458 5.859205 ATCTTCTAATGTTCCCAATTGCC 57.141 39.130 0.00 0.00 0.00 4.52
4434 7502 1.341679 GCCGGGGTAATCCTCCTTTTT 60.342 52.381 2.18 0.00 35.33 1.94
4632 7704 8.877779 GGATGTCAACTATGCTATCATATTGTC 58.122 37.037 0.00 5.03 34.88 3.18
4681 7785 5.700402 AGTGAGGTAAAATATCTGGCTGT 57.300 39.130 0.00 0.00 0.00 4.40
4682 7786 6.067217 AGTGAGGTAAAATATCTGGCTGTT 57.933 37.500 0.00 0.00 0.00 3.16
4683 7787 6.485171 AGTGAGGTAAAATATCTGGCTGTTT 58.515 36.000 0.00 0.00 0.00 2.83
4684 7788 6.948309 AGTGAGGTAAAATATCTGGCTGTTTT 59.052 34.615 0.00 0.00 0.00 2.43
4685 7789 7.029563 GTGAGGTAAAATATCTGGCTGTTTTG 58.970 38.462 0.00 0.00 0.00 2.44
4686 7790 6.152661 TGAGGTAAAATATCTGGCTGTTTTGG 59.847 38.462 0.00 0.00 0.00 3.28
4687 7791 6.252995 AGGTAAAATATCTGGCTGTTTTGGA 58.747 36.000 0.00 0.00 0.00 3.53
4688 7792 6.723977 AGGTAAAATATCTGGCTGTTTTGGAA 59.276 34.615 0.00 0.00 0.00 3.53
4689 7793 7.400052 AGGTAAAATATCTGGCTGTTTTGGAAT 59.600 33.333 0.00 0.00 0.00 3.01
4690 7794 8.040727 GGTAAAATATCTGGCTGTTTTGGAATT 58.959 33.333 0.00 0.00 0.00 2.17
4691 7795 9.435688 GTAAAATATCTGGCTGTTTTGGAATTT 57.564 29.630 0.00 0.00 0.00 1.82
4692 7796 8.922931 AAAATATCTGGCTGTTTTGGAATTTT 57.077 26.923 0.00 0.00 0.00 1.82
4693 7797 8.922931 AAATATCTGGCTGTTTTGGAATTTTT 57.077 26.923 0.00 0.00 0.00 1.94
4694 7798 7.910441 ATATCTGGCTGTTTTGGAATTTTTG 57.090 32.000 0.00 0.00 0.00 2.44
4695 7799 3.876320 TCTGGCTGTTTTGGAATTTTTGC 59.124 39.130 0.00 0.00 0.00 3.68
4696 7800 2.948315 TGGCTGTTTTGGAATTTTTGCC 59.052 40.909 0.00 0.00 38.42 4.52
4697 7801 2.293122 GGCTGTTTTGGAATTTTTGCCC 59.707 45.455 0.00 0.00 32.50 5.36
4698 7802 3.213506 GCTGTTTTGGAATTTTTGCCCT 58.786 40.909 0.00 0.00 0.00 5.19
4699 7803 3.631686 GCTGTTTTGGAATTTTTGCCCTT 59.368 39.130 0.00 0.00 0.00 3.95
4700 7804 4.497842 GCTGTTTTGGAATTTTTGCCCTTG 60.498 41.667 0.00 0.00 0.00 3.61
4701 7805 4.848357 TGTTTTGGAATTTTTGCCCTTGA 58.152 34.783 0.00 0.00 0.00 3.02
4702 7806 5.256474 TGTTTTGGAATTTTTGCCCTTGAA 58.744 33.333 0.00 0.00 0.00 2.69
4703 7807 5.890419 TGTTTTGGAATTTTTGCCCTTGAAT 59.110 32.000 0.00 0.00 0.00 2.57
4704 7808 6.379417 TGTTTTGGAATTTTTGCCCTTGAATT 59.621 30.769 0.00 0.00 0.00 2.17
4705 7809 7.093596 TGTTTTGGAATTTTTGCCCTTGAATTT 60.094 29.630 0.00 0.00 0.00 1.82
4706 7810 7.415592 TTTGGAATTTTTGCCCTTGAATTTT 57.584 28.000 0.00 0.00 0.00 1.82
4707 7811 7.415592 TTGGAATTTTTGCCCTTGAATTTTT 57.584 28.000 0.00 0.00 0.00 1.94
4708 7812 6.803642 TGGAATTTTTGCCCTTGAATTTTTG 58.196 32.000 0.00 0.00 0.00 2.44
4709 7813 5.691305 GGAATTTTTGCCCTTGAATTTTTGC 59.309 36.000 0.00 0.00 0.00 3.68
4710 7814 4.645762 TTTTTGCCCTTGAATTTTTGCC 57.354 36.364 0.00 0.00 0.00 4.52
4711 7815 2.268762 TTGCCCTTGAATTTTTGCCC 57.731 45.000 0.00 0.00 0.00 5.36
4712 7816 0.034616 TGCCCTTGAATTTTTGCCCG 59.965 50.000 0.00 0.00 0.00 6.13
4736 7840 4.768448 TCACATGTCTTGCAAATCCATCTT 59.232 37.500 0.00 0.00 0.00 2.40
4740 7844 7.434307 CACATGTCTTGCAAATCCATCTTAATC 59.566 37.037 0.00 0.00 0.00 1.75
4766 7870 5.682943 TTTTTCGTGGGTAAATCACTCAG 57.317 39.130 0.00 0.00 38.70 3.35
4952 8056 4.526970 GAGATATTGGCCAGGTTCTTTCA 58.473 43.478 5.11 0.00 0.00 2.69
4992 8096 5.833131 TCCCTCTGCTTTGACTTTGTTATTT 59.167 36.000 0.00 0.00 0.00 1.40
5191 8295 6.913170 AGTTGACTTAACATATTGTGCCTTG 58.087 36.000 0.00 0.00 41.88 3.61
5323 8427 5.710099 TCTGTCTGGAACAAAACTGTCTTTT 59.290 36.000 0.00 0.00 38.70 2.27
5332 8436 8.611757 GGAACAAAACTGTCTTTTGCAATTTAT 58.388 29.630 0.00 0.00 41.66 1.40
5334 8438 8.491331 ACAAAACTGTCTTTTGCAATTTATGT 57.509 26.923 0.00 1.60 41.66 2.29
5362 8466 3.304659 CCATGACAAAAAGTGTTCTCGGG 60.305 47.826 0.00 0.00 41.96 5.14
5371 8475 1.207329 AGTGTTCTCGGGGTAAGCATC 59.793 52.381 0.00 0.00 0.00 3.91
5392 8496 0.992802 CGACGCTCTTCCTTTACTGC 59.007 55.000 0.00 0.00 0.00 4.40
5439 8543 7.514721 AGATTAAAGTGTTGGAGACTTTACCA 58.485 34.615 9.18 0.00 42.72 3.25
5443 8547 4.652822 AGTGTTGGAGACTTTACCATTCC 58.347 43.478 0.00 0.00 36.02 3.01
5511 8618 6.987403 AAGGTGTATCTAATCCTCTCTTCC 57.013 41.667 0.00 0.00 0.00 3.46
5526 8633 9.661954 ATCCTCTCTTCCAAACTTATACAGATA 57.338 33.333 0.00 0.00 0.00 1.98
5826 8982 6.762187 TCTTACGGGATTTACAATTCGCAATA 59.238 34.615 0.00 0.00 0.00 1.90
5856 9012 5.985781 TGTGCTCTTGAATAAACGAAAGAC 58.014 37.500 0.00 0.00 0.00 3.01
5918 9074 0.035152 AACGCAGATTCTCATGGGCA 60.035 50.000 0.00 0.00 32.98 5.36
5958 9114 2.922283 ACCTTCTTCCCAGGTGATTCAT 59.078 45.455 0.00 0.00 43.52 2.57
5961 9117 5.128919 CCTTCTTCCCAGGTGATTCATTAG 58.871 45.833 0.00 0.00 0.00 1.73
5962 9118 4.778213 TCTTCCCAGGTGATTCATTAGG 57.222 45.455 0.00 0.00 0.00 2.69
5969 9125 5.280882 CCCAGGTGATTCATTAGGCTATCAT 60.281 44.000 0.00 0.00 30.51 2.45
5981 9137 9.542462 TCATTAGGCTATCATTTTGTACAGTAC 57.458 33.333 3.49 3.49 0.00 2.73
5983 9139 4.809426 AGGCTATCATTTTGTACAGTACGC 59.191 41.667 6.23 0.24 0.00 4.42
6008 9164 9.321562 GCTGTACCATAACTAACTAGCAAATTA 57.678 33.333 0.00 0.00 0.00 1.40
6033 9190 7.565190 AGAATATTGGAGAAGATATGCAGGA 57.435 36.000 0.00 0.00 0.00 3.86
6048 9205 8.149647 AGATATGCAGGAAGAACTAGAAATGAG 58.850 37.037 0.00 0.00 0.00 2.90
6053 9210 6.428159 GCAGGAAGAACTAGAAATGAGTTTCA 59.572 38.462 0.00 0.00 44.92 2.69
6084 9241 9.865321 ATGTAGTTGATCCAATTCATTTTCTTG 57.135 29.630 0.00 0.00 0.00 3.02
6086 9243 9.346725 GTAGTTGATCCAATTCATTTTCTTGTC 57.653 33.333 0.00 0.00 0.00 3.18
6087 9244 7.954835 AGTTGATCCAATTCATTTTCTTGTCA 58.045 30.769 0.00 0.00 0.00 3.58
6200 9357 4.401519 CCTCCAGTAGAAGAATGTCGGTAA 59.598 45.833 0.00 0.00 0.00 2.85
6216 9373 2.885894 CGGTAAGACATAGAGGGGAGAC 59.114 54.545 0.00 0.00 0.00 3.36
6251 9408 9.248291 ACAACTACAATATTCAAAAGTTGCTTG 57.752 29.630 19.09 10.33 44.74 4.01
6252 9409 9.248291 CAACTACAATATTCAAAAGTTGCTTGT 57.752 29.630 12.28 0.00 37.91 3.16
6253 9410 8.801715 ACTACAATATTCAAAAGTTGCTTGTG 57.198 30.769 0.00 0.00 30.46 3.33
6254 9411 8.629158 ACTACAATATTCAAAAGTTGCTTGTGA 58.371 29.630 0.00 0.00 36.10 3.58
6260 9417 6.890663 TTCAAAAGTTGCTTGTGAATTCAG 57.109 33.333 8.80 0.00 41.18 3.02
6261 9418 5.964758 TCAAAAGTTGCTTGTGAATTCAGT 58.035 33.333 8.80 0.00 35.10 3.41
6262 9419 5.806502 TCAAAAGTTGCTTGTGAATTCAGTG 59.193 36.000 8.80 3.26 35.10 3.66
6263 9420 5.581126 AAAGTTGCTTGTGAATTCAGTGA 57.419 34.783 8.80 0.00 0.00 3.41
6276 9433 0.473694 TCAGTGAGGAGGCCCAAGAA 60.474 55.000 0.00 0.00 33.88 2.52
6302 9459 5.836024 ACTAGGAATACCCAAGTCAAACA 57.164 39.130 0.00 0.00 37.41 2.83
6327 9484 1.135112 TGTGACGAGGATCATTGACCG 60.135 52.381 0.61 0.00 33.17 4.79
6328 9485 0.459899 TGACGAGGATCATTGACCGG 59.540 55.000 0.00 0.00 33.17 5.28
6358 9517 4.330074 CCCTTTTCATGTGTTAGTAGCGAG 59.670 45.833 0.00 0.00 0.00 5.03
6366 9525 5.395682 TGTGTTAGTAGCGAGTGGTTATT 57.604 39.130 0.00 0.00 0.00 1.40
6378 9537 5.393243 GCGAGTGGTTATTAGAGACAAGAGT 60.393 44.000 0.00 0.00 0.00 3.24
6427 9613 2.930040 CACTTGATAGCGGTTCGAACAT 59.070 45.455 28.24 14.01 0.00 2.71
6445 9631 3.463944 ACATTTCAAGACTCGAAACGGT 58.536 40.909 0.00 0.00 35.31 4.83
6492 9679 1.352687 GGGAGAGCTCTTGGAAAACCT 59.647 52.381 19.36 0.00 0.00 3.50
6602 9794 5.227238 CAAGCTTTGCTCATTCGATAACT 57.773 39.130 0.00 0.00 38.25 2.24
6611 9803 5.347635 TGCTCATTCGATAACTGTGTTACAC 59.652 40.000 8.76 8.76 34.56 2.90
6620 9812 6.529125 CGATAACTGTGTTACACCGTTTATCT 59.471 38.462 25.22 11.63 38.30 1.98
6624 9816 5.464389 ACTGTGTTACACCGTTTATCTGAAC 59.536 40.000 13.29 0.00 32.73 3.18
6625 9817 5.358090 TGTGTTACACCGTTTATCTGAACA 58.642 37.500 13.29 0.00 32.73 3.18
6626 9818 5.992829 TGTGTTACACCGTTTATCTGAACAT 59.007 36.000 13.29 0.00 32.73 2.71
6627 9819 6.073494 TGTGTTACACCGTTTATCTGAACATG 60.073 38.462 13.29 0.00 32.73 3.21
6630 9822 7.226918 TGTTACACCGTTTATCTGAACATGAAA 59.773 33.333 0.00 0.00 0.00 2.69
6631 9823 6.817765 ACACCGTTTATCTGAACATGAAAT 57.182 33.333 0.00 0.00 0.00 2.17
6632 9824 7.915293 ACACCGTTTATCTGAACATGAAATA 57.085 32.000 0.00 0.00 0.00 1.40
6736 9930 3.391296 AGGTTCACCGATATGGCTACATT 59.609 43.478 0.00 0.00 43.94 2.71
6754 9950 0.692756 TTCCCGGGGCATGACTATGA 60.693 55.000 23.50 0.00 36.36 2.15
6768 9964 1.906574 ACTATGAACGCTCCTTCCCAA 59.093 47.619 0.00 0.00 0.00 4.12
6784 9980 2.569853 TCCCAAGACACCGTCACAATAT 59.430 45.455 0.00 0.00 34.60 1.28
6796 9992 2.111043 CAATATCGCACCCCGGCT 59.889 61.111 0.00 0.00 37.59 5.52
6851 10048 3.738791 CGCGTGTCCATGCTATTATGTTA 59.261 43.478 9.59 0.00 41.02 2.41
6881 10078 0.248289 CATCGTTTGTCTACCCCCGT 59.752 55.000 0.00 0.00 0.00 5.28
6896 10093 3.104512 CCCCCGTTATATATGAGAGGCA 58.895 50.000 0.00 0.00 0.00 4.75
6950 10148 4.018324 TCCTATCCTGTCTACACACAGTCT 60.018 45.833 0.22 0.00 42.10 3.24
6951 10149 4.336993 CCTATCCTGTCTACACACAGTCTC 59.663 50.000 0.22 0.00 42.10 3.36
7120 10319 0.820871 CTGCTACTCCCAGACTCCAC 59.179 60.000 0.00 0.00 32.03 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.893634 TTCCGTTCATTTTAGATTGACCTATAA 57.106 29.630 0.00 0.00 0.00 0.98
17 18 6.263392 TGTTGGTTCCGTTCATTTTAGATTGA 59.737 34.615 0.00 0.00 0.00 2.57
18 19 6.442952 TGTTGGTTCCGTTCATTTTAGATTG 58.557 36.000 0.00 0.00 0.00 2.67
23 24 5.578005 TGTTGTTGGTTCCGTTCATTTTA 57.422 34.783 0.00 0.00 0.00 1.52
32 33 2.349438 CGAGACATTGTTGTTGGTTCCG 60.349 50.000 0.00 0.00 35.79 4.30
64 65 0.887387 TTAAAAGCGCGCTCCAAGGT 60.887 50.000 36.57 15.57 0.00 3.50
65 66 0.451783 ATTAAAAGCGCGCTCCAAGG 59.548 50.000 36.57 0.00 0.00 3.61
74 75 7.132213 TGACATAGCTCATTAATTAAAAGCGC 58.868 34.615 21.10 14.82 34.89 5.92
125 126 3.317430 GCAGGGACATCTTTGGATTCATC 59.683 47.826 0.00 0.00 0.00 2.92
168 169 4.148128 AGTATTGCTTAGCATGCAGAGT 57.852 40.909 21.98 0.61 41.71 3.24
223 387 5.163713 GCTAGAGGTTCTAAAAAGCACCATG 60.164 44.000 0.00 0.00 27.81 3.66
225 389 4.324267 GCTAGAGGTTCTAAAAAGCACCA 58.676 43.478 0.00 0.00 27.81 4.17
226 390 3.371285 CGCTAGAGGTTCTAAAAAGCACC 59.629 47.826 0.00 0.00 27.81 5.01
229 407 3.858247 TCCGCTAGAGGTTCTAAAAAGC 58.142 45.455 12.66 0.00 0.00 3.51
241 419 1.077123 GCATGCATGATCCGCTAGAG 58.923 55.000 30.64 0.00 0.00 2.43
242 420 0.668401 CGCATGCATGATCCGCTAGA 60.668 55.000 30.64 0.00 0.00 2.43
247 425 0.594602 ATTTCCGCATGCATGATCCG 59.405 50.000 30.64 22.20 0.00 4.18
263 441 1.395608 GTACGCGTGTACCATGCATTT 59.604 47.619 25.31 0.00 45.59 2.32
272 450 5.928465 GCATGATGCATGTACGCGTGTAC 62.928 52.174 28.07 28.07 45.82 2.90
273 451 1.857837 CATGATGCATGTACGCGTGTA 59.142 47.619 24.59 11.19 37.12 2.90
274 452 0.652071 CATGATGCATGTACGCGTGT 59.348 50.000 24.59 6.91 37.12 4.49
298 476 2.644676 GGCCCTGTTCTACAAAGATCC 58.355 52.381 0.00 0.00 0.00 3.36
353 531 3.776417 AGCAAAATTCCAGTGGGCAATAT 59.224 39.130 9.92 0.00 0.00 1.28
354 532 3.172339 AGCAAAATTCCAGTGGGCAATA 58.828 40.909 9.92 0.00 0.00 1.90
356 534 1.344114 GAGCAAAATTCCAGTGGGCAA 59.656 47.619 9.92 0.00 0.00 4.52
357 535 0.968405 GAGCAAAATTCCAGTGGGCA 59.032 50.000 9.92 0.00 0.00 5.36
360 538 3.006110 ACACATGAGCAAAATTCCAGTGG 59.994 43.478 1.40 1.40 0.00 4.00
375 1493 2.136298 ACACCCACAAACACACATGA 57.864 45.000 0.00 0.00 0.00 3.07
379 1497 2.750712 ACAACTACACCCACAAACACAC 59.249 45.455 0.00 0.00 0.00 3.82
406 1524 3.554692 GGACAGAATCGGCGCACG 61.555 66.667 10.83 11.16 46.11 5.34
408 1526 2.125552 CTGGACAGAATCGGCGCA 60.126 61.111 10.83 0.00 0.00 6.09
432 1681 5.352569 ACTCGAATACAAATTGCTCCTTCAG 59.647 40.000 0.00 0.00 0.00 3.02
463 1712 7.226720 CCGATAATTCCAACACTAAGTATGCTT 59.773 37.037 0.56 0.56 38.66 3.91
467 1716 5.995897 GGCCGATAATTCCAACACTAAGTAT 59.004 40.000 0.00 0.00 0.00 2.12
469 1718 4.080526 AGGCCGATAATTCCAACACTAAGT 60.081 41.667 0.00 0.00 0.00 2.24
470 1719 4.451900 AGGCCGATAATTCCAACACTAAG 58.548 43.478 0.00 0.00 0.00 2.18
494 1785 2.014128 GGGGTGTGAAATATGACACGG 58.986 52.381 0.00 0.00 42.89 4.94
517 1808 0.531090 TAGTGTTGGAAAGCACGCGT 60.531 50.000 5.58 5.58 40.26 6.01
518 1809 0.163788 CTAGTGTTGGAAAGCACGCG 59.836 55.000 3.53 3.53 40.26 6.01
519 1810 1.069906 CACTAGTGTTGGAAAGCACGC 60.070 52.381 15.06 0.00 40.26 5.34
520 1811 2.479837 TCACTAGTGTTGGAAAGCACG 58.520 47.619 21.99 0.00 40.26 5.34
521 1812 4.893424 TTTCACTAGTGTTGGAAAGCAC 57.107 40.909 21.99 0.00 35.98 4.40
522 1813 7.592938 CAATATTTCACTAGTGTTGGAAAGCA 58.407 34.615 21.99 8.14 33.28 3.91
523 1814 6.528072 GCAATATTTCACTAGTGTTGGAAAGC 59.472 38.462 21.99 15.42 33.28 3.51
524 1815 6.742718 CGCAATATTTCACTAGTGTTGGAAAG 59.257 38.462 21.99 10.19 33.28 2.62
532 1823 7.043325 GGAGTAGTTCGCAATATTTCACTAGTG 60.043 40.741 17.17 17.17 0.00 2.74
543 1834 6.624352 ATTAGTACGGAGTAGTTCGCAATA 57.376 37.500 0.00 0.00 45.54 1.90
557 1848 6.093771 AGCATCCTCGATACTAATTAGTACGG 59.906 42.308 27.84 23.01 41.18 4.02
558 1849 6.962116 CAGCATCCTCGATACTAATTAGTACG 59.038 42.308 24.22 24.94 41.18 3.67
559 1850 8.041829 TCAGCATCCTCGATACTAATTAGTAC 57.958 38.462 24.22 17.11 41.18 2.73
560 1851 8.512956 GTTCAGCATCCTCGATACTAATTAGTA 58.487 37.037 24.01 24.01 42.43 1.82
561 1852 7.014326 TGTTCAGCATCCTCGATACTAATTAGT 59.986 37.037 21.35 21.35 40.24 2.24
562 1853 7.371159 TGTTCAGCATCCTCGATACTAATTAG 58.629 38.462 11.05 11.05 0.00 1.73
563 1854 7.284919 TGTTCAGCATCCTCGATACTAATTA 57.715 36.000 0.00 0.00 0.00 1.40
564 1855 6.161855 TGTTCAGCATCCTCGATACTAATT 57.838 37.500 0.00 0.00 0.00 1.40
565 1856 5.791336 TGTTCAGCATCCTCGATACTAAT 57.209 39.130 0.00 0.00 0.00 1.73
566 1857 5.451937 CCTTGTTCAGCATCCTCGATACTAA 60.452 44.000 0.00 0.00 0.00 2.24
573 1864 2.322355 ATCCTTGTTCAGCATCCTCG 57.678 50.000 0.00 0.00 0.00 4.63
578 1869 5.716228 TCACCAAAATATCCTTGTTCAGCAT 59.284 36.000 0.00 0.00 0.00 3.79
583 1874 9.921637 TTGTAATTCACCAAAATATCCTTGTTC 57.078 29.630 0.00 0.00 0.00 3.18
586 1877 9.793252 CTCTTGTAATTCACCAAAATATCCTTG 57.207 33.333 0.00 0.00 0.00 3.61
596 1887 9.627123 CCCTAAATATCTCTTGTAATTCACCAA 57.373 33.333 0.00 0.00 0.00 3.67
597 1888 8.998814 TCCCTAAATATCTCTTGTAATTCACCA 58.001 33.333 0.00 0.00 0.00 4.17
598 1889 9.847224 TTCCCTAAATATCTCTTGTAATTCACC 57.153 33.333 0.00 0.00 0.00 4.02
600 1891 9.561069 GCTTCCCTAAATATCTCTTGTAATTCA 57.439 33.333 0.00 0.00 0.00 2.57
623 1914 0.332632 TGGGAATTGGCAGCTAGCTT 59.667 50.000 16.46 0.00 44.79 3.74
655 1946 4.517453 ACTAAGATGTCTAGCCGACTGATC 59.483 45.833 5.48 0.00 43.25 2.92
656 1947 4.465886 ACTAAGATGTCTAGCCGACTGAT 58.534 43.478 5.48 0.00 43.25 2.90
664 1955 8.655651 AATCTTGCTTAACTAAGATGTCTAGC 57.344 34.615 9.18 0.00 41.45 3.42
677 1969 4.336433 TGCATGGAGCTAATCTTGCTTAAC 59.664 41.667 16.93 0.00 45.94 2.01
702 1994 3.386768 AATTGTCCGGATCGACCATAG 57.613 47.619 7.81 0.00 38.90 2.23
705 1997 1.276705 TGAAATTGTCCGGATCGACCA 59.723 47.619 7.81 0.00 38.90 4.02
706 1998 2.018542 TGAAATTGTCCGGATCGACC 57.981 50.000 7.81 0.00 31.35 4.79
707 1999 2.286418 GCATGAAATTGTCCGGATCGAC 60.286 50.000 7.81 0.00 0.00 4.20
708 2000 1.939934 GCATGAAATTGTCCGGATCGA 59.060 47.619 7.81 1.44 0.00 3.59
711 2003 2.026641 CCTGCATGAAATTGTCCGGAT 58.973 47.619 7.81 0.00 0.00 4.18
715 2007 2.973694 ATGCCTGCATGAAATTGTCC 57.026 45.000 3.36 0.00 35.03 4.02
764 2067 5.568620 AAAACTGTCCCTGACTAATCTGT 57.431 39.130 0.00 0.00 33.15 3.41
775 2078 5.714806 TCTTGTCAAAAGAAAAACTGTCCCT 59.285 36.000 0.00 0.00 0.00 4.20
782 2085 9.237846 CCTGACTAATCTTGTCAAAAGAAAAAC 57.762 33.333 0.00 0.00 42.85 2.43
783 2086 8.413229 CCCTGACTAATCTTGTCAAAAGAAAAA 58.587 33.333 0.00 0.00 42.85 1.94
784 2087 7.777910 TCCCTGACTAATCTTGTCAAAAGAAAA 59.222 33.333 0.00 0.00 42.85 2.29
785 2088 7.228706 GTCCCTGACTAATCTTGTCAAAAGAAA 59.771 37.037 0.00 0.00 42.85 2.52
786 2089 6.710744 GTCCCTGACTAATCTTGTCAAAAGAA 59.289 38.462 0.00 0.00 42.85 2.52
787 2090 6.183361 TGTCCCTGACTAATCTTGTCAAAAGA 60.183 38.462 0.00 0.00 42.85 2.52
788 2091 5.997746 TGTCCCTGACTAATCTTGTCAAAAG 59.002 40.000 0.00 0.00 42.85 2.27
789 2092 5.935945 TGTCCCTGACTAATCTTGTCAAAA 58.064 37.500 0.00 0.00 42.85 2.44
790 2093 5.071788 ACTGTCCCTGACTAATCTTGTCAAA 59.928 40.000 0.00 0.00 42.85 2.69
791 2094 4.593206 ACTGTCCCTGACTAATCTTGTCAA 59.407 41.667 0.00 0.00 42.85 3.18
792 2095 4.160329 ACTGTCCCTGACTAATCTTGTCA 58.840 43.478 0.00 0.00 41.48 3.58
793 2096 4.810191 ACTGTCCCTGACTAATCTTGTC 57.190 45.455 0.00 0.00 33.15 3.18
794 2097 6.681729 TTAACTGTCCCTGACTAATCTTGT 57.318 37.500 0.00 0.00 33.15 3.16
795 2098 9.667107 TTAATTAACTGTCCCTGACTAATCTTG 57.333 33.333 0.00 0.00 33.15 3.02
796 2099 9.892130 CTTAATTAACTGTCCCTGACTAATCTT 57.108 33.333 0.00 0.00 33.15 2.40
797 2100 7.988028 GCTTAATTAACTGTCCCTGACTAATCT 59.012 37.037 0.00 0.00 33.15 2.40
798 2101 7.769044 TGCTTAATTAACTGTCCCTGACTAATC 59.231 37.037 0.00 0.00 33.15 1.75
799 2102 7.630082 TGCTTAATTAACTGTCCCTGACTAAT 58.370 34.615 0.00 0.00 33.15 1.73
800 2103 7.011499 TGCTTAATTAACTGTCCCTGACTAA 57.989 36.000 0.00 0.00 33.15 2.24
801 2104 6.614694 TGCTTAATTAACTGTCCCTGACTA 57.385 37.500 0.00 0.00 33.15 2.59
802 2105 5.499004 TGCTTAATTAACTGTCCCTGACT 57.501 39.130 0.00 0.00 33.15 3.41
803 2106 7.715249 TGATATGCTTAATTAACTGTCCCTGAC 59.285 37.037 0.00 0.00 0.00 3.51
804 2107 7.801104 TGATATGCTTAATTAACTGTCCCTGA 58.199 34.615 0.00 0.00 0.00 3.86
805 2108 8.450578 TTGATATGCTTAATTAACTGTCCCTG 57.549 34.615 0.00 0.00 0.00 4.45
806 2109 7.229506 GCTTGATATGCTTAATTAACTGTCCCT 59.770 37.037 0.00 0.00 0.00 4.20
807 2110 7.229506 AGCTTGATATGCTTAATTAACTGTCCC 59.770 37.037 0.00 0.00 37.52 4.46
808 2111 8.072567 CAGCTTGATATGCTTAATTAACTGTCC 58.927 37.037 0.00 0.00 38.92 4.02
809 2112 8.616076 ACAGCTTGATATGCTTAATTAACTGTC 58.384 33.333 0.00 0.00 38.92 3.51
810 2113 8.400947 CACAGCTTGATATGCTTAATTAACTGT 58.599 33.333 0.00 0.05 38.92 3.55
811 2114 8.400947 ACACAGCTTGATATGCTTAATTAACTG 58.599 33.333 0.00 0.00 38.92 3.16
812 2115 8.511604 ACACAGCTTGATATGCTTAATTAACT 57.488 30.769 0.00 0.00 38.92 2.24
829 2132 5.256474 AGCTAATGTCCAAATACACAGCTT 58.744 37.500 8.40 0.00 43.41 3.74
893 2196 1.069823 CAGCTGTGGACTCACTGAACT 59.930 52.381 5.25 0.00 42.95 3.01
942 2245 5.184864 TGCTTCTTCTTTTTCTGGACACAAA 59.815 36.000 0.00 0.00 0.00 2.83
999 2302 1.380524 CTTCTTCCAGGCTGCTCATG 58.619 55.000 9.56 0.00 0.00 3.07
1230 2537 7.447374 TGATAGTGTTGTTGGTTTATTCAGG 57.553 36.000 0.00 0.00 0.00 3.86
1247 2557 3.125829 GTGGTGTTGCAGACATGATAGTG 59.874 47.826 0.00 0.00 41.10 2.74
1264 2574 1.378882 CCAATGAGGCGGATGTGGTG 61.379 60.000 0.00 0.00 0.00 4.17
1270 2580 3.644966 TTTTAGACCAATGAGGCGGAT 57.355 42.857 0.00 0.00 43.14 4.18
1289 2599 3.788142 TCCTTATCTCAGGGAAGGCAATT 59.212 43.478 1.50 0.00 39.74 2.32
1306 2616 4.099573 GCTCAGGCTACATGTTACTCCTTA 59.900 45.833 2.30 0.00 35.22 2.69
1309 2619 2.827652 GCTCAGGCTACATGTTACTCC 58.172 52.381 2.30 0.25 35.22 3.85
1324 2634 3.733337 AGTGTGGTTTTCTGTAGCTCAG 58.267 45.455 0.00 0.00 44.85 3.35
1326 2636 3.728845 TGAGTGTGGTTTTCTGTAGCTC 58.271 45.455 0.00 0.00 0.00 4.09
1327 2637 3.838244 TGAGTGTGGTTTTCTGTAGCT 57.162 42.857 0.00 0.00 0.00 3.32
1328 2638 5.239525 AGAAATGAGTGTGGTTTTCTGTAGC 59.760 40.000 0.00 0.00 37.12 3.58
1329 2639 6.867662 AGAAATGAGTGTGGTTTTCTGTAG 57.132 37.500 0.00 0.00 37.12 2.74
1330 2640 7.639113 AAAGAAATGAGTGTGGTTTTCTGTA 57.361 32.000 0.00 0.00 38.18 2.74
1331 2641 6.530019 AAAGAAATGAGTGTGGTTTTCTGT 57.470 33.333 0.00 0.00 38.18 3.41
1332 2642 7.260603 AGAAAAGAAATGAGTGTGGTTTTCTG 58.739 34.615 6.41 0.00 39.87 3.02
1333 2643 7.410120 AGAAAAGAAATGAGTGTGGTTTTCT 57.590 32.000 0.00 0.00 39.45 2.52
1334 2644 8.382875 CAAAGAAAAGAAATGAGTGTGGTTTTC 58.617 33.333 0.00 0.00 34.23 2.29
1335 2645 7.148423 GCAAAGAAAAGAAATGAGTGTGGTTTT 60.148 33.333 0.00 0.00 0.00 2.43
1336 2646 6.313658 GCAAAGAAAAGAAATGAGTGTGGTTT 59.686 34.615 0.00 0.00 0.00 3.27
1337 2647 5.812127 GCAAAGAAAAGAAATGAGTGTGGTT 59.188 36.000 0.00 0.00 0.00 3.67
1338 2648 5.351458 GCAAAGAAAAGAAATGAGTGTGGT 58.649 37.500 0.00 0.00 0.00 4.16
1339 2649 4.442073 CGCAAAGAAAAGAAATGAGTGTGG 59.558 41.667 0.00 0.00 0.00 4.17
1340 2650 4.085415 GCGCAAAGAAAAGAAATGAGTGTG 60.085 41.667 0.30 0.00 0.00 3.82
1341 2651 4.044426 GCGCAAAGAAAAGAAATGAGTGT 58.956 39.130 0.30 0.00 0.00 3.55
1342 2652 4.043750 TGCGCAAAGAAAAGAAATGAGTG 58.956 39.130 8.16 0.00 0.00 3.51
1343 2653 4.305989 TGCGCAAAGAAAAGAAATGAGT 57.694 36.364 8.16 0.00 0.00 3.41
1344 2654 5.640218 TTTGCGCAAAGAAAAGAAATGAG 57.360 34.783 30.63 0.00 0.00 2.90
1345 2655 5.640218 CTTTGCGCAAAGAAAAGAAATGA 57.360 34.783 45.11 18.03 46.36 2.57
1362 2672 5.083656 GCCTGAGCTACAAAAGAACTTTGC 61.084 45.833 0.45 0.78 41.26 3.68
1363 2673 4.540824 GCCTGAGCTACAAAAGAACTTTG 58.459 43.478 0.45 0.00 42.31 2.77
1364 2674 4.837896 GCCTGAGCTACAAAAGAACTTT 57.162 40.909 0.00 0.00 35.50 2.66
1378 2688 1.383523 GGGTTTCATGTAGCCTGAGC 58.616 55.000 5.24 0.00 40.32 4.26
1379 2689 1.561542 AGGGGTTTCATGTAGCCTGAG 59.438 52.381 15.09 0.00 33.68 3.35
1380 2690 1.668826 AGGGGTTTCATGTAGCCTGA 58.331 50.000 15.09 0.00 33.68 3.86
1381 2691 2.514458 AAGGGGTTTCATGTAGCCTG 57.486 50.000 15.09 0.00 33.68 4.85
1382 2692 3.542969 AAAAGGGGTTTCATGTAGCCT 57.457 42.857 15.09 0.00 33.68 4.58
1383 2693 3.576550 TCAAAAAGGGGTTTCATGTAGCC 59.423 43.478 9.41 9.41 0.00 3.93
1384 2694 4.864704 TCAAAAAGGGGTTTCATGTAGC 57.135 40.909 0.00 0.00 0.00 3.58
1385 2695 6.481976 GGTTTTCAAAAAGGGGTTTCATGTAG 59.518 38.462 0.00 0.00 0.00 2.74
1386 2696 6.070194 TGGTTTTCAAAAAGGGGTTTCATGTA 60.070 34.615 0.00 0.00 0.00 2.29
1387 2697 5.189928 GGTTTTCAAAAAGGGGTTTCATGT 58.810 37.500 0.00 0.00 0.00 3.21
1388 2698 5.065859 GTGGTTTTCAAAAAGGGGTTTCATG 59.934 40.000 0.00 0.00 0.00 3.07
1389 2699 5.189928 GTGGTTTTCAAAAAGGGGTTTCAT 58.810 37.500 0.00 0.00 0.00 2.57
1390 2700 4.041691 TGTGGTTTTCAAAAAGGGGTTTCA 59.958 37.500 0.00 0.00 0.00 2.69
1391 2701 4.393680 GTGTGGTTTTCAAAAAGGGGTTTC 59.606 41.667 0.00 0.00 0.00 2.78
1392 2702 4.042311 AGTGTGGTTTTCAAAAAGGGGTTT 59.958 37.500 0.00 0.00 0.00 3.27
1393 2703 3.585289 AGTGTGGTTTTCAAAAAGGGGTT 59.415 39.130 0.00 0.00 0.00 4.11
1394 2704 3.178046 AGTGTGGTTTTCAAAAAGGGGT 58.822 40.909 0.00 0.00 0.00 4.95
1395 2705 3.196685 TGAGTGTGGTTTTCAAAAAGGGG 59.803 43.478 0.00 0.00 0.00 4.79
1396 2706 4.464069 TGAGTGTGGTTTTCAAAAAGGG 57.536 40.909 0.00 0.00 0.00 3.95
1397 2707 6.818142 AGAAATGAGTGTGGTTTTCAAAAAGG 59.182 34.615 0.00 0.00 31.94 3.11
1398 2708 7.832503 AGAAATGAGTGTGGTTTTCAAAAAG 57.167 32.000 0.00 0.00 31.94 2.27
1399 2709 8.502387 CAAAGAAATGAGTGTGGTTTTCAAAAA 58.498 29.630 0.00 0.00 31.94 1.94
1400 2710 7.875041 TCAAAGAAATGAGTGTGGTTTTCAAAA 59.125 29.630 0.00 0.00 31.94 2.44
1401 2711 7.382110 TCAAAGAAATGAGTGTGGTTTTCAAA 58.618 30.769 0.00 0.00 31.94 2.69
1402 2712 6.929625 TCAAAGAAATGAGTGTGGTTTTCAA 58.070 32.000 0.00 0.00 31.94 2.69
1403 2713 6.522625 TCAAAGAAATGAGTGTGGTTTTCA 57.477 33.333 0.00 0.00 31.94 2.69
1404 2714 6.360681 CGATCAAAGAAATGAGTGTGGTTTTC 59.639 38.462 0.00 0.00 31.76 2.29
1405 2715 6.039270 TCGATCAAAGAAATGAGTGTGGTTTT 59.961 34.615 0.00 0.00 31.76 2.43
1406 2716 5.530915 TCGATCAAAGAAATGAGTGTGGTTT 59.469 36.000 0.00 0.00 31.76 3.27
1407 2717 5.063204 TCGATCAAAGAAATGAGTGTGGTT 58.937 37.500 0.00 0.00 31.76 3.67
1408 2718 4.641396 TCGATCAAAGAAATGAGTGTGGT 58.359 39.130 0.00 0.00 31.76 4.16
1409 2719 4.436584 GCTCGATCAAAGAAATGAGTGTGG 60.437 45.833 0.00 0.00 31.76 4.17
1410 2720 4.391216 AGCTCGATCAAAGAAATGAGTGTG 59.609 41.667 0.00 0.00 31.76 3.82
1411 2721 4.573900 AGCTCGATCAAAGAAATGAGTGT 58.426 39.130 0.00 0.00 31.76 3.55
1412 2722 5.542616 AAGCTCGATCAAAGAAATGAGTG 57.457 39.130 0.00 0.00 31.76 3.51
1413 2723 7.044181 TGATAAGCTCGATCAAAGAAATGAGT 58.956 34.615 8.45 0.00 30.35 3.41
1414 2724 7.474398 TGATAAGCTCGATCAAAGAAATGAG 57.526 36.000 8.45 0.00 30.35 2.90
1415 2725 7.496920 ACATGATAAGCTCGATCAAAGAAATGA 59.503 33.333 13.59 0.00 36.90 2.57
1416 2726 7.637229 ACATGATAAGCTCGATCAAAGAAATG 58.363 34.615 13.59 9.51 36.90 2.32
1417 2727 7.041508 GGACATGATAAGCTCGATCAAAGAAAT 60.042 37.037 13.59 0.00 36.90 2.17
1418 2728 6.258727 GGACATGATAAGCTCGATCAAAGAAA 59.741 38.462 13.59 0.00 36.90 2.52
1419 2729 5.755375 GGACATGATAAGCTCGATCAAAGAA 59.245 40.000 13.59 0.00 36.90 2.52
1420 2730 5.163416 TGGACATGATAAGCTCGATCAAAGA 60.163 40.000 13.59 0.00 36.90 2.52
1421 2731 5.052481 TGGACATGATAAGCTCGATCAAAG 58.948 41.667 13.59 11.78 36.90 2.77
1422 2732 5.022282 TGGACATGATAAGCTCGATCAAA 57.978 39.130 13.59 0.00 36.90 2.69
1423 2733 4.670896 TGGACATGATAAGCTCGATCAA 57.329 40.909 13.59 0.00 36.90 2.57
1424 2734 4.281688 TCATGGACATGATAAGCTCGATCA 59.718 41.667 10.75 12.33 42.42 2.92
1425 2735 4.814147 TCATGGACATGATAAGCTCGATC 58.186 43.478 10.75 0.00 42.42 3.69
1426 2736 4.525874 TCTCATGGACATGATAAGCTCGAT 59.474 41.667 14.73 0.00 45.74 3.59
1427 2737 3.891366 TCTCATGGACATGATAAGCTCGA 59.109 43.478 14.73 5.04 45.74 4.04
1428 2738 4.248691 TCTCATGGACATGATAAGCTCG 57.751 45.455 14.73 2.89 45.74 5.03
1429 2739 7.013083 ACAATTTCTCATGGACATGATAAGCTC 59.987 37.037 14.73 0.00 45.74 4.09
1430 2740 6.832384 ACAATTTCTCATGGACATGATAAGCT 59.168 34.615 14.73 4.30 45.74 3.74
1462 2772 5.075858 TCCTTTTTCATTGATGCATGTCC 57.924 39.130 2.46 0.00 0.00 4.02
1483 2793 1.334149 GCTCGAGTTGCTGGTTGTTTC 60.334 52.381 15.13 0.00 0.00 2.78
1498 2809 2.077821 TACCAACGTGTGCTGCTCGA 62.078 55.000 15.90 0.00 37.50 4.04
1607 2929 8.977267 TTTTAAGTAATATAAAGCGCCCCTTA 57.023 30.769 2.29 0.00 32.20 2.69
1610 2932 7.500720 TCTTTTAAGTAATATAAAGCGCCCC 57.499 36.000 2.29 0.00 0.00 5.80
1710 3037 2.743636 TGGTAGAGCTGAAAAGGACG 57.256 50.000 0.00 0.00 0.00 4.79
1735 3062 1.898863 ACATGAAGGGGTAGAGGCAT 58.101 50.000 0.00 0.00 0.00 4.40
1830 3161 1.855360 CGCTTCTTCATTAGCCTCGAC 59.145 52.381 0.00 0.00 33.86 4.20
1882 3244 5.535333 ACTGACCTGAAAAATGAGCAATTG 58.465 37.500 0.00 0.00 0.00 2.32
1919 3281 2.991250 AGCAGAGCGATTATTTGGTGT 58.009 42.857 0.00 0.00 0.00 4.16
1920 3282 4.361451 AAAGCAGAGCGATTATTTGGTG 57.639 40.909 0.00 0.00 0.00 4.17
1921 3283 6.509418 TTAAAAGCAGAGCGATTATTTGGT 57.491 33.333 0.00 0.00 0.00 3.67
1923 3285 9.075519 TGAATTTAAAAGCAGAGCGATTATTTG 57.924 29.630 0.00 0.00 0.00 2.32
2012 3380 6.223120 AGGCAATCCAAATGAAAACTGTTAC 58.777 36.000 0.00 0.00 33.74 2.50
2027 3395 7.775053 AACTTTTACTAAATGAGGCAATCCA 57.225 32.000 2.29 0.00 33.74 3.41
2098 3466 4.142609 TGATCTGTCCTAAATCACCTGC 57.857 45.455 0.00 0.00 0.00 4.85
2133 3501 9.967451 TGAGGTTAATTACTCACCATTCAAATA 57.033 29.630 7.42 0.00 38.71 1.40
2154 3522 8.420222 TGTGTGATTTGATTTAATTGTTGAGGT 58.580 29.630 0.00 0.00 0.00 3.85
2210 3578 5.704217 TTGTGCCAATAACGTTTTTCAAC 57.296 34.783 5.91 3.71 0.00 3.18
2255 3626 8.978472 ACTAGCATGTACTTCCTCAAGTAATTA 58.022 33.333 0.00 0.00 44.99 1.40
2262 3633 8.534954 AGTAATACTAGCATGTACTTCCTCAA 57.465 34.615 0.00 0.00 0.00 3.02
2264 3635 9.250624 CAAAGTAATACTAGCATGTACTTCCTC 57.749 37.037 0.00 0.00 34.69 3.71
2265 3636 8.759782 ACAAAGTAATACTAGCATGTACTTCCT 58.240 33.333 0.00 0.00 34.69 3.36
2266 3637 8.818057 CACAAAGTAATACTAGCATGTACTTCC 58.182 37.037 0.00 0.00 34.69 3.46
2268 3639 9.367444 GTCACAAAGTAATACTAGCATGTACTT 57.633 33.333 0.00 0.00 36.75 2.24
2269 3640 8.528643 TGTCACAAAGTAATACTAGCATGTACT 58.471 33.333 0.00 0.00 0.00 2.73
2271 3642 9.884636 AATGTCACAAAGTAATACTAGCATGTA 57.115 29.630 0.00 0.00 0.00 2.29
2272 3643 8.668353 CAATGTCACAAAGTAATACTAGCATGT 58.332 33.333 0.00 0.00 0.00 3.21
2273 3644 8.882736 TCAATGTCACAAAGTAATACTAGCATG 58.117 33.333 0.00 0.00 0.00 4.06
2283 3837 4.460263 AGCAGGTCAATGTCACAAAGTAA 58.540 39.130 0.00 0.00 0.00 2.24
2290 3844 3.058914 GTGTGTTAGCAGGTCAATGTCAC 60.059 47.826 0.00 0.00 0.00 3.67
2377 3934 0.984995 AAGTGGTCTTCCTAGTGGCC 59.015 55.000 0.00 0.00 34.23 5.36
2462 4033 6.824958 ATACAAACCTACCCAGATATGTGT 57.175 37.500 0.00 0.00 0.00 3.72
2474 4045 7.991460 ACCTTCTGGCTTATTATACAAACCTAC 59.009 37.037 0.00 0.00 36.63 3.18
2516 5297 1.948834 CGCCAATGTCAGGATATGCAA 59.051 47.619 0.00 0.00 0.00 4.08
2571 5352 8.627208 AGATACTTCATCTCTCTTTGCAAAAA 57.373 30.769 13.84 0.00 40.09 1.94
2572 5353 8.627208 AAGATACTTCATCTCTCTTTGCAAAA 57.373 30.769 13.84 0.00 43.56 2.44
2573 5354 9.155975 GTAAGATACTTCATCTCTCTTTGCAAA 57.844 33.333 12.14 12.14 43.56 3.68
2574 5355 8.535335 AGTAAGATACTTCATCTCTCTTTGCAA 58.465 33.333 0.00 0.00 43.56 4.08
2575 5356 8.072321 AGTAAGATACTTCATCTCTCTTTGCA 57.928 34.615 0.00 0.00 43.56 4.08
2576 5357 9.677567 CTAGTAAGATACTTCATCTCTCTTTGC 57.322 37.037 0.00 0.00 43.56 3.68
2579 5360 9.268268 CGACTAGTAAGATACTTCATCTCTCTT 57.732 37.037 0.00 0.00 43.56 2.85
2580 5361 7.386848 GCGACTAGTAAGATACTTCATCTCTCT 59.613 40.741 0.00 0.00 43.56 3.10
2581 5362 7.171848 TGCGACTAGTAAGATACTTCATCTCTC 59.828 40.741 0.00 0.00 43.56 3.20
2582 5363 6.993308 TGCGACTAGTAAGATACTTCATCTCT 59.007 38.462 0.00 0.00 43.56 3.10
2583 5364 7.041644 AGTGCGACTAGTAAGATACTTCATCTC 60.042 40.741 0.00 0.00 43.56 2.75
2584 5365 6.768861 AGTGCGACTAGTAAGATACTTCATCT 59.231 38.462 0.00 0.00 46.48 2.90
2585 5366 6.961576 AGTGCGACTAGTAAGATACTTCATC 58.038 40.000 0.00 0.00 40.14 2.92
2586 5367 6.945938 AGTGCGACTAGTAAGATACTTCAT 57.054 37.500 0.00 0.00 40.14 2.57
2587 5368 7.466996 GCTTAGTGCGACTAGTAAGATACTTCA 60.467 40.741 0.00 0.00 40.14 3.02
2588 5369 6.852345 GCTTAGTGCGACTAGTAAGATACTTC 59.148 42.308 0.00 0.00 40.14 3.01
2589 5370 6.318144 TGCTTAGTGCGACTAGTAAGATACTT 59.682 38.462 0.00 0.00 46.63 2.24
2590 5371 5.821470 TGCTTAGTGCGACTAGTAAGATACT 59.179 40.000 0.00 4.70 46.63 2.12
2591 5372 6.057627 TGCTTAGTGCGACTAGTAAGATAC 57.942 41.667 0.00 0.00 46.63 2.24
2592 5373 5.238868 CCTGCTTAGTGCGACTAGTAAGATA 59.761 44.000 0.00 0.00 46.63 1.98
2593 5374 4.036971 CCTGCTTAGTGCGACTAGTAAGAT 59.963 45.833 0.00 0.00 46.63 2.40
2594 5375 3.377485 CCTGCTTAGTGCGACTAGTAAGA 59.623 47.826 0.00 0.00 46.63 2.10
2601 5382 1.903877 ATGCCCTGCTTAGTGCGACT 61.904 55.000 0.00 0.00 46.63 4.18
2606 5387 3.940209 TGAAAAATGCCCTGCTTAGTG 57.060 42.857 0.00 0.00 0.00 2.74
2662 5443 5.763204 GGATATTAGGTACAACATGGTGTGG 59.237 44.000 26.70 0.00 32.75 4.17
2672 5453 4.203342 AGGTCCCGGATATTAGGTACAA 57.797 45.455 0.73 0.00 0.00 2.41
2765 5546 7.365497 ACCCCATTCAATATCTTTTCATTCC 57.635 36.000 0.00 0.00 0.00 3.01
2766 5547 9.750125 GTTACCCCATTCAATATCTTTTCATTC 57.250 33.333 0.00 0.00 0.00 2.67
2934 5715 3.540314 ACTGAGATCCTGAGATGTTGC 57.460 47.619 0.00 0.00 30.90 4.17
2974 5755 6.325286 AGAAAGGAATACAGTAGGGAGATGAC 59.675 42.308 0.00 0.00 0.00 3.06
3145 5936 7.707893 GCTGCATTTGATAAGACCAATAAATGT 59.292 33.333 0.00 0.00 37.65 2.71
3301 6092 1.263484 CACACAAGAACTGCTGCTGAG 59.737 52.381 13.69 0.00 0.00 3.35
3662 6538 5.991328 ACATTACTCTAATCATTGCACCG 57.009 39.130 0.00 0.00 0.00 4.94
3730 6615 0.031616 ACAACACCCAAACCCCACAT 60.032 50.000 0.00 0.00 0.00 3.21
3795 6680 7.768582 TCATTTCGATCACACAAGTATAATGGT 59.231 33.333 0.00 0.00 0.00 3.55
3866 6897 8.360390 GGTTGATCCAAGAGTTGAAACTATTTT 58.640 33.333 0.43 0.00 38.30 1.82
3891 6922 6.407202 AGTAGCAAAAAGAGTACTATGTGGG 58.593 40.000 0.00 0.00 0.00 4.61
3898 6929 7.390718 CCCAACATAAGTAGCAAAAAGAGTACT 59.609 37.037 0.00 0.00 0.00 2.73
3899 6930 7.527457 CCCAACATAAGTAGCAAAAAGAGTAC 58.473 38.462 0.00 0.00 0.00 2.73
3900 6931 6.150474 GCCCAACATAAGTAGCAAAAAGAGTA 59.850 38.462 0.00 0.00 0.00 2.59
3914 6945 4.789012 AACATGTTCAGCCCAACATAAG 57.211 40.909 4.92 3.32 43.75 1.73
3931 6962 9.177608 ACTAGCAATTGTACACATGAATAACAT 57.822 29.630 7.40 0.00 40.17 2.71
3941 6972 6.685527 TTGTTGAACTAGCAATTGTACACA 57.314 33.333 7.40 0.00 0.00 3.72
3979 7010 5.588958 AGAAATTAGGAAATGGAAGCAGC 57.411 39.130 0.00 0.00 0.00 5.25
3986 7017 9.426534 AAGGAGGATAAAGAAATTAGGAAATGG 57.573 33.333 0.00 0.00 0.00 3.16
4006 7037 0.251077 AGCAGGCTGACAAAAGGAGG 60.251 55.000 20.86 0.00 0.00 4.30
4103 7135 4.041567 TGAAGTAGTTCCAAGCAGAATGGA 59.958 41.667 7.84 0.00 45.09 3.41
4107 7139 4.997395 GTCATGAAGTAGTTCCAAGCAGAA 59.003 41.667 7.84 0.00 0.00 3.02
4250 7289 4.458295 AGAATGAAGTTCAGAAGTGGCATG 59.542 41.667 11.91 0.00 39.39 4.06
4251 7290 4.660168 AGAATGAAGTTCAGAAGTGGCAT 58.340 39.130 11.91 0.00 39.39 4.40
4252 7291 4.090761 AGAATGAAGTTCAGAAGTGGCA 57.909 40.909 11.91 0.00 39.39 4.92
4253 7292 4.633565 CCTAGAATGAAGTTCAGAAGTGGC 59.366 45.833 11.91 0.00 39.39 5.01
4264 7305 8.246180 CACAAAAACATATGCCTAGAATGAAGT 58.754 33.333 1.58 0.00 0.00 3.01
4320 7361 5.240844 GGCAGGGTATTTTCGTATTAGCAAT 59.759 40.000 0.00 0.00 0.00 3.56
4389 7431 9.507329 GCAATTGGGAACATTAGAAGATATCTA 57.493 33.333 5.46 0.00 42.32 1.98
4410 7452 0.185175 GGAGGATTACCCCGGCAATT 59.815 55.000 0.00 0.00 36.73 2.32
4416 7458 3.359695 TCAAAAAGGAGGATTACCCCG 57.640 47.619 0.00 0.00 36.73 5.73
4529 7601 2.032550 CGATGGCAAGGCTTTGACTATG 59.967 50.000 16.23 1.09 43.12 2.23
4632 7704 3.853307 GCCGTTTCATGAAGACCAAACAG 60.853 47.826 8.41 0.00 0.00 3.16
4681 7785 7.415592 AAATTCAAGGGCAAAAATTCCAAAA 57.584 28.000 0.00 0.00 0.00 2.44
4682 7786 7.415592 AAAATTCAAGGGCAAAAATTCCAAA 57.584 28.000 0.00 0.00 0.00 3.28
4683 7787 7.263496 CAAAAATTCAAGGGCAAAAATTCCAA 58.737 30.769 0.00 0.00 0.00 3.53
4684 7788 6.682362 GCAAAAATTCAAGGGCAAAAATTCCA 60.682 34.615 0.00 0.00 0.00 3.53
4685 7789 5.691305 GCAAAAATTCAAGGGCAAAAATTCC 59.309 36.000 0.00 0.00 0.00 3.01
4686 7790 5.691305 GGCAAAAATTCAAGGGCAAAAATTC 59.309 36.000 0.00 0.00 0.00 2.17
4687 7791 5.453057 GGGCAAAAATTCAAGGGCAAAAATT 60.453 36.000 0.00 0.00 0.00 1.82
4688 7792 4.039004 GGGCAAAAATTCAAGGGCAAAAAT 59.961 37.500 0.00 0.00 0.00 1.82
4689 7793 3.382865 GGGCAAAAATTCAAGGGCAAAAA 59.617 39.130 0.00 0.00 0.00 1.94
4690 7794 2.954989 GGGCAAAAATTCAAGGGCAAAA 59.045 40.909 0.00 0.00 0.00 2.44
4691 7795 2.580962 GGGCAAAAATTCAAGGGCAAA 58.419 42.857 0.00 0.00 0.00 3.68
4692 7796 1.542108 CGGGCAAAAATTCAAGGGCAA 60.542 47.619 0.00 0.00 0.00 4.52
4693 7797 0.034616 CGGGCAAAAATTCAAGGGCA 59.965 50.000 0.00 0.00 0.00 5.36
4694 7798 0.034756 ACGGGCAAAAATTCAAGGGC 59.965 50.000 0.00 0.00 0.00 5.19
4695 7799 1.342819 TGACGGGCAAAAATTCAAGGG 59.657 47.619 0.00 0.00 0.00 3.95
4696 7800 2.223923 TGTGACGGGCAAAAATTCAAGG 60.224 45.455 0.00 0.00 0.00 3.61
4697 7801 3.090952 TGTGACGGGCAAAAATTCAAG 57.909 42.857 0.00 0.00 0.00 3.02
4698 7802 3.181471 ACATGTGACGGGCAAAAATTCAA 60.181 39.130 0.00 0.00 0.00 2.69
4699 7803 2.363680 ACATGTGACGGGCAAAAATTCA 59.636 40.909 0.00 0.00 0.00 2.57
4700 7804 2.986479 GACATGTGACGGGCAAAAATTC 59.014 45.455 1.15 0.00 0.00 2.17
4701 7805 2.627699 AGACATGTGACGGGCAAAAATT 59.372 40.909 1.15 0.00 0.00 1.82
4702 7806 2.238521 AGACATGTGACGGGCAAAAAT 58.761 42.857 1.15 0.00 0.00 1.82
4703 7807 1.686355 AGACATGTGACGGGCAAAAA 58.314 45.000 1.15 0.00 0.00 1.94
4704 7808 1.336440 CAAGACATGTGACGGGCAAAA 59.664 47.619 1.15 0.00 0.00 2.44
4705 7809 0.950836 CAAGACATGTGACGGGCAAA 59.049 50.000 1.15 0.00 0.00 3.68
4706 7810 1.514678 GCAAGACATGTGACGGGCAA 61.515 55.000 1.15 0.00 0.00 4.52
4707 7811 1.965930 GCAAGACATGTGACGGGCA 60.966 57.895 1.15 0.00 0.00 5.36
4708 7812 1.514678 TTGCAAGACATGTGACGGGC 61.515 55.000 1.15 0.00 0.00 6.13
4709 7813 0.950836 TTTGCAAGACATGTGACGGG 59.049 50.000 1.15 0.00 0.00 5.28
4710 7814 2.414559 GGATTTGCAAGACATGTGACGG 60.415 50.000 1.15 0.00 0.00 4.79
4711 7815 2.226200 TGGATTTGCAAGACATGTGACG 59.774 45.455 1.15 0.00 0.00 4.35
4712 7816 3.921119 TGGATTTGCAAGACATGTGAC 57.079 42.857 1.15 0.00 0.00 3.67
4766 7870 8.764524 ATATGAGAAATTAACCGAGTAGCATC 57.235 34.615 0.00 0.00 0.00 3.91
4940 8044 2.158755 ACCTGACACTGAAAGAACCTGG 60.159 50.000 0.00 0.00 37.43 4.45
4952 8056 0.839946 GGGATGCCATACCTGACACT 59.160 55.000 0.00 0.00 0.00 3.55
4992 8096 8.386606 GTTGCATGAAAAGTACAAAATGTTCAA 58.613 29.630 0.00 0.00 0.00 2.69
5026 8130 5.714863 TCCCATATATGCACCCAAAATTCT 58.285 37.500 7.24 0.00 0.00 2.40
5332 8436 2.168106 ACTTTTTGTCATGGCTGCAACA 59.832 40.909 0.50 0.00 0.00 3.33
5334 8438 2.168106 ACACTTTTTGTCATGGCTGCAA 59.832 40.909 0.50 0.00 29.79 4.08
5371 8475 0.531200 AGTAAAGGAAGAGCGTCGGG 59.469 55.000 0.00 0.00 0.00 5.14
5439 8543 7.378181 GTGATCAGTTTTGTGGTAATTGGAAT 58.622 34.615 0.00 0.00 0.00 3.01
5443 8547 6.331369 AGGTGATCAGTTTTGTGGTAATTG 57.669 37.500 0.00 0.00 0.00 2.32
5526 8633 3.758554 GGCACATTCCACAAGTGATAGTT 59.241 43.478 0.94 0.00 35.33 2.24
5534 8641 2.886523 TGAAGAAGGCACATTCCACAAG 59.113 45.455 0.00 0.00 0.00 3.16
5826 8982 2.283145 ATTCAAGAGCACAACAGGCT 57.717 45.000 0.00 0.00 46.07 4.58
5918 9074 1.018148 TGGCATCGTGACGTTTTTGT 58.982 45.000 4.40 0.00 0.00 2.83
5956 9112 8.487970 CGTACTGTACAAAATGATAGCCTAATG 58.512 37.037 17.35 0.00 0.00 1.90
5958 9114 6.477688 GCGTACTGTACAAAATGATAGCCTAA 59.522 38.462 17.35 0.00 0.00 2.69
5961 9117 4.809426 AGCGTACTGTACAAAATGATAGCC 59.191 41.667 17.35 0.00 0.00 3.93
5962 9118 5.728255 CAGCGTACTGTACAAAATGATAGC 58.272 41.667 17.35 9.12 39.22 2.97
6008 9164 7.982252 TCCTGCATATCTTCTCCAATATTCTT 58.018 34.615 0.00 0.00 0.00 2.52
6011 9167 7.982252 TCTTCCTGCATATCTTCTCCAATATT 58.018 34.615 0.00 0.00 0.00 1.28
6024 9181 7.800092 ACTCATTTCTAGTTCTTCCTGCATAT 58.200 34.615 0.00 0.00 0.00 1.78
6025 9182 7.187824 ACTCATTTCTAGTTCTTCCTGCATA 57.812 36.000 0.00 0.00 0.00 3.14
6029 9186 7.875041 TCTGAAACTCATTTCTAGTTCTTCCTG 59.125 37.037 1.82 0.00 44.02 3.86
6060 9217 9.346725 GACAAGAAAATGAATTGGATCAACTAC 57.653 33.333 0.00 0.00 32.06 2.73
6080 9237 3.490439 TCACCTGCAGATTTGACAAGA 57.510 42.857 17.39 0.00 0.00 3.02
6081 9238 3.754850 TGATCACCTGCAGATTTGACAAG 59.245 43.478 17.39 0.00 0.00 3.16
6083 9240 3.421919 TGATCACCTGCAGATTTGACA 57.578 42.857 17.39 11.77 0.00 3.58
6084 9241 3.755378 ACTTGATCACCTGCAGATTTGAC 59.245 43.478 17.39 9.63 0.00 3.18
6086 9243 3.119602 CCACTTGATCACCTGCAGATTTG 60.120 47.826 17.39 9.43 0.00 2.32
6087 9244 3.087031 CCACTTGATCACCTGCAGATTT 58.913 45.455 17.39 0.00 0.00 2.17
6200 9357 1.646447 TGTGGTCTCCCCTCTATGTCT 59.354 52.381 0.00 0.00 0.00 3.41
6225 9382 9.248291 CAAGCAACTTTTGAATATTGTAGTTGT 57.752 29.630 19.26 10.59 42.56 3.32
6250 9407 1.003580 GGCCTCCTCACTGAATTCACA 59.996 52.381 3.38 0.00 0.00 3.58
6251 9408 1.680249 GGGCCTCCTCACTGAATTCAC 60.680 57.143 3.38 0.00 0.00 3.18
6252 9409 0.620556 GGGCCTCCTCACTGAATTCA 59.379 55.000 8.12 8.12 0.00 2.57
6253 9410 0.620556 TGGGCCTCCTCACTGAATTC 59.379 55.000 4.53 0.00 0.00 2.17
6254 9411 1.005215 CTTGGGCCTCCTCACTGAATT 59.995 52.381 4.53 0.00 0.00 2.17
6255 9412 0.622665 CTTGGGCCTCCTCACTGAAT 59.377 55.000 4.53 0.00 0.00 2.57
6256 9413 0.473694 TCTTGGGCCTCCTCACTGAA 60.474 55.000 4.53 0.00 0.00 3.02
6257 9414 0.473694 TTCTTGGGCCTCCTCACTGA 60.474 55.000 4.53 0.00 0.00 3.41
6258 9415 0.322008 GTTCTTGGGCCTCCTCACTG 60.322 60.000 4.53 0.00 0.00 3.66
6259 9416 1.492993 GGTTCTTGGGCCTCCTCACT 61.493 60.000 4.53 0.00 0.00 3.41
6260 9417 1.002011 GGTTCTTGGGCCTCCTCAC 60.002 63.158 4.53 0.00 0.00 3.51
6261 9418 0.118346 TAGGTTCTTGGGCCTCCTCA 59.882 55.000 4.53 0.00 36.38 3.86
6262 9419 0.542333 GTAGGTTCTTGGGCCTCCTC 59.458 60.000 4.53 0.00 36.38 3.71
6263 9420 0.119358 AGTAGGTTCTTGGGCCTCCT 59.881 55.000 4.53 7.48 36.38 3.69
6302 9459 3.055891 TCAATGATCCTCGTCACATGTGT 60.056 43.478 24.63 4.06 0.00 3.72
6328 9485 2.316108 ACACATGAAAAGGGGTTGACC 58.684 47.619 0.00 0.00 39.11 4.02
6337 9494 5.163953 CCACTCGCTACTAACACATGAAAAG 60.164 44.000 0.00 0.00 0.00 2.27
6358 9517 6.038997 ACCACTCTTGTCTCTAATAACCAC 57.961 41.667 0.00 0.00 0.00 4.16
6427 9613 4.044336 TGTACCGTTTCGAGTCTTGAAA 57.956 40.909 10.72 10.72 33.18 2.69
6445 9631 4.669206 TTGTCTTGTTCGGGTAGTTGTA 57.331 40.909 0.00 0.00 0.00 2.41
6589 9781 5.004440 CGGTGTAACACAGTTATCGAATGAG 59.996 44.000 0.00 0.00 39.98 2.90
6602 9794 5.358090 TGTTCAGATAAACGGTGTAACACA 58.642 37.500 0.00 0.00 39.98 3.72
6632 9824 7.817962 CGGTATTCCTCGGATTTATTCTAACAT 59.182 37.037 0.00 0.00 0.00 2.71
6652 9844 1.540267 CCTCGGATGATCGACGGTATT 59.460 52.381 0.00 0.00 35.18 1.89
6736 9930 0.692756 TTCATAGTCATGCCCCGGGA 60.693 55.000 26.32 1.94 31.73 5.14
6754 9950 0.250338 GTGTCTTGGGAAGGAGCGTT 60.250 55.000 0.00 0.00 0.00 4.84
6768 9964 1.203758 TGCGATATTGTGACGGTGTCT 59.796 47.619 0.00 0.00 33.15 3.41
6851 10048 6.534079 GGTAGACAAACGATGTAACTTATGCT 59.466 38.462 0.00 0.00 44.12 3.79
6857 10054 3.055602 GGGGGTAGACAAACGATGTAACT 60.056 47.826 0.00 0.00 44.12 2.24
6868 10065 6.554784 TCTCATATATAACGGGGGTAGACAA 58.445 40.000 0.00 0.00 0.00 3.18
6950 10148 3.949113 GGTTACAGTTGGACTTGGTTTGA 59.051 43.478 0.00 0.00 0.00 2.69
6951 10149 3.951680 AGGTTACAGTTGGACTTGGTTTG 59.048 43.478 0.00 0.00 0.00 2.93
7120 10319 1.000163 ACAGTTGCAGGTAGAGTCACG 60.000 52.381 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.