Multiple sequence alignment - TraesCS4A01G244500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G244500 chr4A 100.000 3731 0 0 1 3731 554923159 554926889 0.000000e+00 6890
1 TraesCS4A01G244500 chr4D 92.284 2566 129 24 374 2895 44748239 44745699 0.000000e+00 3578
2 TraesCS4A01G244500 chr4D 90.747 616 32 9 3127 3731 44745310 44744709 0.000000e+00 798
3 TraesCS4A01G244500 chr4B 86.511 1631 122 25 433 2003 64699543 64697951 0.000000e+00 1703
4 TraesCS4A01G244500 chr4B 94.249 852 29 8 2045 2895 64697941 64697109 0.000000e+00 1284
5 TraesCS4A01G244500 chr4B 93.863 277 13 3 3459 3731 64696479 64696203 7.460000e-112 414
6 TraesCS4A01G244500 chr4B 87.097 217 11 7 2917 3126 64697117 64696911 2.900000e-56 230
7 TraesCS4A01G244500 chr4B 96.923 65 2 0 3319 3383 64696572 64696508 3.940000e-20 110
8 TraesCS4A01G244500 chr6D 81.250 368 51 13 3316 3672 173902988 173902628 7.890000e-72 281


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G244500 chr4A 554923159 554926889 3730 False 6890.0 6890 100.0000 1 3731 1 chr4A.!!$F1 3730
1 TraesCS4A01G244500 chr4D 44744709 44748239 3530 True 2188.0 3578 91.5155 374 3731 2 chr4D.!!$R1 3357
2 TraesCS4A01G244500 chr4B 64696203 64699543 3340 True 748.2 1703 91.7286 433 3731 5 chr4B.!!$R1 3298

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.03213 TTTTGCGGTAAATGGCGCAA 59.968 45.0 10.83 0.0 44.05 4.85 F
1492 1564 0.23359 CGAAATGTGGCGTCGAACAA 59.766 50.0 0.00 0.0 36.92 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1876 1948 0.031515 ACACCATCCGGATCCCACTA 60.032 55.0 15.88 0.0 35.59 2.74 R
3384 3667 0.108041 AACCGTCAGTGTGAACCGTT 60.108 50.0 0.00 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.512033 CCTTCTTCTTCGGTGACCTAG 57.488 52.381 0.00 0.00 0.00 3.02
21 22 2.417515 CCTTCTTCTTCGGTGACCTAGC 60.418 54.545 0.00 0.00 0.00 3.42
22 23 1.183549 TCTTCTTCGGTGACCTAGCC 58.816 55.000 0.00 0.00 0.00 3.93
23 24 0.895530 CTTCTTCGGTGACCTAGCCA 59.104 55.000 0.00 0.00 0.00 4.75
24 25 0.895530 TTCTTCGGTGACCTAGCCAG 59.104 55.000 0.00 0.00 0.00 4.85
41 42 4.162690 GGCCGGGCAGTCGAAGAT 62.163 66.667 25.33 0.00 40.67 2.40
42 43 2.586357 GCCGGGCAGTCGAAGATC 60.586 66.667 15.62 0.00 40.67 2.75
43 44 2.278857 CCGGGCAGTCGAAGATCG 60.279 66.667 0.00 0.00 40.67 3.69
44 45 2.956964 CGGGCAGTCGAAGATCGC 60.957 66.667 0.00 0.00 40.67 4.58
45 46 2.496817 GGGCAGTCGAAGATCGCT 59.503 61.111 0.00 0.00 40.67 4.93
46 47 1.880340 GGGCAGTCGAAGATCGCTG 60.880 63.158 15.09 15.09 42.50 5.18
47 48 1.153745 GGCAGTCGAAGATCGCTGT 60.154 57.895 18.26 0.00 42.03 4.40
48 49 1.416813 GGCAGTCGAAGATCGCTGTG 61.417 60.000 18.26 8.05 42.03 3.66
49 50 1.994467 CAGTCGAAGATCGCTGTGC 59.006 57.895 12.69 0.00 40.67 4.57
50 51 0.457509 CAGTCGAAGATCGCTGTGCT 60.458 55.000 12.69 0.00 40.67 4.40
51 52 1.095600 AGTCGAAGATCGCTGTGCTA 58.904 50.000 0.00 0.00 40.67 3.49
52 53 1.064803 AGTCGAAGATCGCTGTGCTAG 59.935 52.381 0.00 0.00 40.67 3.42
53 54 1.064208 GTCGAAGATCGCTGTGCTAGA 59.936 52.381 0.00 0.00 40.67 2.43
54 55 1.950216 TCGAAGATCGCTGTGCTAGAT 59.050 47.619 0.00 0.00 40.21 1.98
55 56 2.031595 TCGAAGATCGCTGTGCTAGATC 60.032 50.000 0.00 0.00 40.21 2.75
56 57 2.287248 CGAAGATCGCTGTGCTAGATCA 60.287 50.000 0.00 0.00 42.21 2.92
57 58 2.791383 AGATCGCTGTGCTAGATCAC 57.209 50.000 0.00 0.00 42.21 3.06
58 59 1.339610 AGATCGCTGTGCTAGATCACC 59.660 52.381 0.00 0.00 42.21 4.02
59 60 1.067669 GATCGCTGTGCTAGATCACCA 59.932 52.381 0.00 0.00 40.19 4.17
60 61 0.173481 TCGCTGTGCTAGATCACCAC 59.827 55.000 0.00 0.00 36.17 4.16
61 62 0.174389 CGCTGTGCTAGATCACCACT 59.826 55.000 0.00 0.00 36.17 4.00
62 63 1.649664 GCTGTGCTAGATCACCACTG 58.350 55.000 0.00 4.46 36.17 3.66
63 64 1.205655 GCTGTGCTAGATCACCACTGA 59.794 52.381 16.01 0.00 36.17 3.41
64 65 2.886081 CTGTGCTAGATCACCACTGAC 58.114 52.381 0.00 0.00 36.17 3.51
65 66 2.495270 CTGTGCTAGATCACCACTGACT 59.505 50.000 0.00 0.00 36.17 3.41
66 67 2.899900 TGTGCTAGATCACCACTGACTT 59.100 45.455 0.00 0.00 36.17 3.01
67 68 3.324846 TGTGCTAGATCACCACTGACTTT 59.675 43.478 0.00 0.00 36.17 2.66
68 69 3.681897 GTGCTAGATCACCACTGACTTTG 59.318 47.826 0.00 0.00 0.00 2.77
69 70 3.578282 TGCTAGATCACCACTGACTTTGA 59.422 43.478 0.00 0.00 0.00 2.69
70 71 4.180057 GCTAGATCACCACTGACTTTGAG 58.820 47.826 0.00 0.00 0.00 3.02
71 72 3.051081 AGATCACCACTGACTTTGAGC 57.949 47.619 0.00 0.00 0.00 4.26
72 73 2.369860 AGATCACCACTGACTTTGAGCA 59.630 45.455 0.00 0.00 0.00 4.26
73 74 1.953559 TCACCACTGACTTTGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
74 75 0.947244 CACCACTGACTTTGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
75 76 0.546122 ACCACTGACTTTGAGCACCA 59.454 50.000 0.00 0.00 0.00 4.17
76 77 0.947244 CCACTGACTTTGAGCACCAC 59.053 55.000 0.00 0.00 0.00 4.16
77 78 0.947244 CACTGACTTTGAGCACCACC 59.053 55.000 0.00 0.00 0.00 4.61
78 79 0.839946 ACTGACTTTGAGCACCACCT 59.160 50.000 0.00 0.00 0.00 4.00
79 80 1.233019 CTGACTTTGAGCACCACCTG 58.767 55.000 0.00 0.00 0.00 4.00
80 81 0.836606 TGACTTTGAGCACCACCTGA 59.163 50.000 0.00 0.00 0.00 3.86
81 82 1.230324 GACTTTGAGCACCACCTGAC 58.770 55.000 0.00 0.00 0.00 3.51
82 83 0.532862 ACTTTGAGCACCACCTGACG 60.533 55.000 0.00 0.00 0.00 4.35
83 84 0.249868 CTTTGAGCACCACCTGACGA 60.250 55.000 0.00 0.00 0.00 4.20
84 85 0.179234 TTTGAGCACCACCTGACGAA 59.821 50.000 0.00 0.00 0.00 3.85
85 86 0.249868 TTGAGCACCACCTGACGAAG 60.250 55.000 0.00 0.00 0.00 3.79
86 87 1.112916 TGAGCACCACCTGACGAAGA 61.113 55.000 0.00 0.00 0.00 2.87
87 88 0.667792 GAGCACCACCTGACGAAGAC 60.668 60.000 0.00 0.00 0.00 3.01
88 89 1.668151 GCACCACCTGACGAAGACC 60.668 63.158 0.00 0.00 0.00 3.85
89 90 1.372997 CACCACCTGACGAAGACCG 60.373 63.158 0.00 0.00 45.44 4.79
98 99 4.870305 CGAAGACCGTCACTCCTG 57.130 61.111 0.40 0.00 0.00 3.86
99 100 1.444553 CGAAGACCGTCACTCCTGC 60.445 63.158 0.40 0.00 0.00 4.85
100 101 1.666011 GAAGACCGTCACTCCTGCA 59.334 57.895 0.40 0.00 0.00 4.41
101 102 0.667792 GAAGACCGTCACTCCTGCAC 60.668 60.000 0.40 0.00 0.00 4.57
102 103 1.399744 AAGACCGTCACTCCTGCACA 61.400 55.000 0.40 0.00 0.00 4.57
103 104 1.664965 GACCGTCACTCCTGCACAC 60.665 63.158 0.00 0.00 0.00 3.82
104 105 2.363711 GACCGTCACTCCTGCACACA 62.364 60.000 0.00 0.00 0.00 3.72
105 106 1.004560 CCGTCACTCCTGCACACAT 60.005 57.895 0.00 0.00 0.00 3.21
106 107 1.016130 CCGTCACTCCTGCACACATC 61.016 60.000 0.00 0.00 0.00 3.06
107 108 0.037882 CGTCACTCCTGCACACATCT 60.038 55.000 0.00 0.00 0.00 2.90
108 109 1.719600 GTCACTCCTGCACACATCTC 58.280 55.000 0.00 0.00 0.00 2.75
109 110 0.610174 TCACTCCTGCACACATCTCC 59.390 55.000 0.00 0.00 0.00 3.71
110 111 0.612229 CACTCCTGCACACATCTCCT 59.388 55.000 0.00 0.00 0.00 3.69
111 112 1.002888 CACTCCTGCACACATCTCCTT 59.997 52.381 0.00 0.00 0.00 3.36
112 113 1.701847 ACTCCTGCACACATCTCCTTT 59.298 47.619 0.00 0.00 0.00 3.11
113 114 2.082231 CTCCTGCACACATCTCCTTTG 58.918 52.381 0.00 0.00 0.00 2.77
114 115 0.524862 CCTGCACACATCTCCTTTGC 59.475 55.000 0.00 0.00 0.00 3.68
115 116 0.524862 CTGCACACATCTCCTTTGCC 59.475 55.000 0.00 0.00 31.94 4.52
116 117 0.178995 TGCACACATCTCCTTTGCCA 60.179 50.000 0.00 0.00 31.94 4.92
117 118 1.180029 GCACACATCTCCTTTGCCAT 58.820 50.000 0.00 0.00 0.00 4.40
118 119 1.133790 GCACACATCTCCTTTGCCATC 59.866 52.381 0.00 0.00 0.00 3.51
119 120 1.747355 CACACATCTCCTTTGCCATCC 59.253 52.381 0.00 0.00 0.00 3.51
120 121 1.341383 ACACATCTCCTTTGCCATCCC 60.341 52.381 0.00 0.00 0.00 3.85
121 122 1.002069 ACATCTCCTTTGCCATCCCA 58.998 50.000 0.00 0.00 0.00 4.37
122 123 1.341383 ACATCTCCTTTGCCATCCCAC 60.341 52.381 0.00 0.00 0.00 4.61
123 124 0.259938 ATCTCCTTTGCCATCCCACC 59.740 55.000 0.00 0.00 0.00 4.61
124 125 1.380380 CTCCTTTGCCATCCCACCC 60.380 63.158 0.00 0.00 0.00 4.61
125 126 2.153898 CTCCTTTGCCATCCCACCCA 62.154 60.000 0.00 0.00 0.00 4.51
126 127 1.984026 CCTTTGCCATCCCACCCAC 60.984 63.158 0.00 0.00 0.00 4.61
127 128 1.984026 CTTTGCCATCCCACCCACC 60.984 63.158 0.00 0.00 0.00 4.61
128 129 2.728460 CTTTGCCATCCCACCCACCA 62.728 60.000 0.00 0.00 0.00 4.17
129 130 3.521765 TTGCCATCCCACCCACCAC 62.522 63.158 0.00 0.00 0.00 4.16
130 131 3.978193 GCCATCCCACCCACCACA 61.978 66.667 0.00 0.00 0.00 4.17
131 132 2.356278 CCATCCCACCCACCACAG 59.644 66.667 0.00 0.00 0.00 3.66
132 133 2.361610 CATCCCACCCACCACAGC 60.362 66.667 0.00 0.00 0.00 4.40
133 134 3.661648 ATCCCACCCACCACAGCC 61.662 66.667 0.00 0.00 0.00 4.85
136 137 2.933287 CCACCCACCACAGCCCTA 60.933 66.667 0.00 0.00 0.00 3.53
137 138 2.351276 CACCCACCACAGCCCTAC 59.649 66.667 0.00 0.00 0.00 3.18
138 139 2.122144 ACCCACCACAGCCCTACA 60.122 61.111 0.00 0.00 0.00 2.74
139 140 2.351276 CCCACCACAGCCCTACAC 59.649 66.667 0.00 0.00 0.00 2.90
140 141 2.525124 CCCACCACAGCCCTACACA 61.525 63.158 0.00 0.00 0.00 3.72
141 142 1.302511 CCACCACAGCCCTACACAC 60.303 63.158 0.00 0.00 0.00 3.82
142 143 1.449782 CACCACAGCCCTACACACA 59.550 57.895 0.00 0.00 0.00 3.72
143 144 0.884704 CACCACAGCCCTACACACAC 60.885 60.000 0.00 0.00 0.00 3.82
144 145 1.341913 ACCACAGCCCTACACACACA 61.342 55.000 0.00 0.00 0.00 3.72
145 146 0.603707 CCACAGCCCTACACACACAG 60.604 60.000 0.00 0.00 0.00 3.66
146 147 0.603707 CACAGCCCTACACACACAGG 60.604 60.000 0.00 0.00 0.00 4.00
147 148 1.672356 CAGCCCTACACACACAGGC 60.672 63.158 0.00 0.00 44.20 4.85
148 149 2.750350 GCCCTACACACACAGGCT 59.250 61.111 0.00 0.00 40.57 4.58
149 150 1.672356 GCCCTACACACACAGGCTG 60.672 63.158 14.16 14.16 40.57 4.85
150 151 1.672356 CCCTACACACACAGGCTGC 60.672 63.158 15.89 0.00 0.00 5.25
151 152 1.672356 CCTACACACACAGGCTGCC 60.672 63.158 15.89 11.65 0.00 4.85
152 153 1.672356 CTACACACACAGGCTGCCC 60.672 63.158 16.57 0.00 0.00 5.36
153 154 2.116983 CTACACACACAGGCTGCCCT 62.117 60.000 16.57 0.00 44.25 5.19
154 155 2.111999 TACACACACAGGCTGCCCTC 62.112 60.000 16.57 0.00 40.33 4.30
155 156 2.851102 ACACACAGGCTGCCCTCT 60.851 61.111 16.57 0.00 40.33 3.69
156 157 2.433446 CACACAGGCTGCCCTCTT 59.567 61.111 16.57 0.00 40.33 2.85
157 158 1.127567 ACACACAGGCTGCCCTCTTA 61.128 55.000 16.57 0.00 40.33 2.10
158 159 0.674895 CACACAGGCTGCCCTCTTAC 60.675 60.000 16.57 0.00 40.33 2.34
159 160 1.448540 CACAGGCTGCCCTCTTACG 60.449 63.158 16.57 0.00 40.33 3.18
160 161 1.913762 ACAGGCTGCCCTCTTACGT 60.914 57.895 16.57 0.00 40.33 3.57
161 162 0.613853 ACAGGCTGCCCTCTTACGTA 60.614 55.000 16.57 0.00 40.33 3.57
162 163 0.179108 CAGGCTGCCCTCTTACGTAC 60.179 60.000 16.57 0.00 40.33 3.67
163 164 1.143401 GGCTGCCCTCTTACGTACC 59.857 63.158 7.66 0.00 0.00 3.34
164 165 1.226888 GCTGCCCTCTTACGTACCG 60.227 63.158 0.00 0.00 0.00 4.02
165 166 1.941999 GCTGCCCTCTTACGTACCGT 61.942 60.000 0.00 0.00 44.35 4.83
166 167 0.529378 CTGCCCTCTTACGTACCGTT 59.471 55.000 0.00 0.00 41.54 4.44
167 168 0.968405 TGCCCTCTTACGTACCGTTT 59.032 50.000 0.00 0.00 41.54 3.60
168 169 1.067635 TGCCCTCTTACGTACCGTTTC 60.068 52.381 0.00 0.00 41.54 2.78
169 170 1.737029 GCCCTCTTACGTACCGTTTCC 60.737 57.143 0.00 0.00 41.54 3.13
170 171 1.134995 CCCTCTTACGTACCGTTTCCC 60.135 57.143 0.00 0.00 41.54 3.97
171 172 1.134995 CCTCTTACGTACCGTTTCCCC 60.135 57.143 0.00 0.00 41.54 4.81
172 173 0.894835 TCTTACGTACCGTTTCCCCC 59.105 55.000 0.00 0.00 41.54 5.40
173 174 0.897621 CTTACGTACCGTTTCCCCCT 59.102 55.000 0.00 0.00 41.54 4.79
174 175 1.276138 CTTACGTACCGTTTCCCCCTT 59.724 52.381 0.00 0.00 41.54 3.95
175 176 1.347062 TACGTACCGTTTCCCCCTTT 58.653 50.000 0.00 0.00 41.54 3.11
176 177 0.473755 ACGTACCGTTTCCCCCTTTT 59.526 50.000 0.00 0.00 36.35 2.27
177 178 1.133823 ACGTACCGTTTCCCCCTTTTT 60.134 47.619 0.00 0.00 36.35 1.94
198 199 6.494893 TTTTTGGTATCGATCAACTCTTGG 57.505 37.500 0.00 0.00 0.00 3.61
199 200 5.414789 TTTGGTATCGATCAACTCTTGGA 57.585 39.130 0.00 0.00 0.00 3.53
200 201 5.614324 TTGGTATCGATCAACTCTTGGAT 57.386 39.130 0.00 0.00 0.00 3.41
201 202 6.724893 TTGGTATCGATCAACTCTTGGATA 57.275 37.500 0.00 0.00 0.00 2.59
202 203 6.724893 TGGTATCGATCAACTCTTGGATAA 57.275 37.500 0.00 0.00 0.00 1.75
203 204 7.119709 TGGTATCGATCAACTCTTGGATAAA 57.880 36.000 0.00 0.00 0.00 1.40
204 205 6.984474 TGGTATCGATCAACTCTTGGATAAAC 59.016 38.462 0.00 0.00 0.00 2.01
205 206 6.424207 GGTATCGATCAACTCTTGGATAAACC 59.576 42.308 0.00 0.00 39.54 3.27
206 207 5.677319 TCGATCAACTCTTGGATAAACCT 57.323 39.130 0.00 0.00 39.86 3.50
207 208 5.419542 TCGATCAACTCTTGGATAAACCTG 58.580 41.667 0.00 0.00 39.86 4.00
208 209 5.186992 TCGATCAACTCTTGGATAAACCTGA 59.813 40.000 0.00 0.00 39.86 3.86
209 210 5.521735 CGATCAACTCTTGGATAAACCTGAG 59.478 44.000 0.00 0.00 41.66 3.35
210 211 6.627087 ATCAACTCTTGGATAAACCTGAGA 57.373 37.500 0.00 0.00 39.94 3.27
211 212 6.627087 TCAACTCTTGGATAAACCTGAGAT 57.373 37.500 0.00 0.00 39.94 2.75
212 213 7.020827 TCAACTCTTGGATAAACCTGAGATT 57.979 36.000 0.00 0.00 39.94 2.40
213 214 6.881065 TCAACTCTTGGATAAACCTGAGATTG 59.119 38.462 0.00 1.22 39.94 2.67
214 215 6.380079 ACTCTTGGATAAACCTGAGATTGT 57.620 37.500 0.00 0.00 39.94 2.71
215 216 6.784031 ACTCTTGGATAAACCTGAGATTGTT 58.216 36.000 0.00 0.00 39.94 2.83
216 217 7.234355 ACTCTTGGATAAACCTGAGATTGTTT 58.766 34.615 0.00 0.00 39.94 2.83
217 218 7.175641 ACTCTTGGATAAACCTGAGATTGTTTG 59.824 37.037 0.00 0.00 39.94 2.93
218 219 7.230747 TCTTGGATAAACCTGAGATTGTTTGA 58.769 34.615 0.00 0.00 39.86 2.69
219 220 7.723616 TCTTGGATAAACCTGAGATTGTTTGAA 59.276 33.333 0.00 0.00 39.86 2.69
220 221 7.831691 TGGATAAACCTGAGATTGTTTGAAA 57.168 32.000 0.00 0.00 39.86 2.69
221 222 8.421249 TGGATAAACCTGAGATTGTTTGAAAT 57.579 30.769 0.00 0.00 39.86 2.17
222 223 9.527157 TGGATAAACCTGAGATTGTTTGAAATA 57.473 29.630 0.00 0.00 39.86 1.40
254 255 8.853077 TTCTAAATAGTGGATTCCATATGCTG 57.147 34.615 9.01 0.00 35.28 4.41
255 256 7.977818 TCTAAATAGTGGATTCCATATGCTGT 58.022 34.615 9.01 0.00 35.28 4.40
256 257 8.439971 TCTAAATAGTGGATTCCATATGCTGTT 58.560 33.333 9.01 3.18 35.28 3.16
257 258 7.902920 AAATAGTGGATTCCATATGCTGTTT 57.097 32.000 9.01 8.92 35.28 2.83
258 259 7.516198 AATAGTGGATTCCATATGCTGTTTC 57.484 36.000 9.01 0.00 35.28 2.78
259 260 5.121380 AGTGGATTCCATATGCTGTTTCT 57.879 39.130 9.01 0.00 35.28 2.52
260 261 4.885907 AGTGGATTCCATATGCTGTTTCTG 59.114 41.667 9.01 0.00 35.28 3.02
261 262 4.883585 GTGGATTCCATATGCTGTTTCTGA 59.116 41.667 9.01 0.00 35.28 3.27
262 263 5.008415 GTGGATTCCATATGCTGTTTCTGAG 59.992 44.000 9.01 0.00 35.28 3.35
263 264 5.104402 TGGATTCCATATGCTGTTTCTGAGA 60.104 40.000 0.00 0.00 0.00 3.27
264 265 6.002704 GGATTCCATATGCTGTTTCTGAGAT 58.997 40.000 0.00 0.00 0.00 2.75
265 266 6.072618 GGATTCCATATGCTGTTTCTGAGATG 60.073 42.308 0.00 0.00 0.00 2.90
266 267 5.363562 TCCATATGCTGTTTCTGAGATGT 57.636 39.130 0.00 0.00 0.00 3.06
267 268 6.484364 TCCATATGCTGTTTCTGAGATGTA 57.516 37.500 0.00 0.00 0.00 2.29
268 269 6.283694 TCCATATGCTGTTTCTGAGATGTAC 58.716 40.000 0.00 0.00 0.00 2.90
269 270 6.098838 TCCATATGCTGTTTCTGAGATGTACT 59.901 38.462 0.00 0.00 0.00 2.73
270 271 6.765036 CCATATGCTGTTTCTGAGATGTACTT 59.235 38.462 0.00 0.00 0.00 2.24
271 272 7.042187 CCATATGCTGTTTCTGAGATGTACTTC 60.042 40.741 0.00 0.50 0.00 3.01
272 273 4.569943 TGCTGTTTCTGAGATGTACTTCC 58.430 43.478 5.19 0.00 0.00 3.46
273 274 4.284490 TGCTGTTTCTGAGATGTACTTCCT 59.716 41.667 5.19 0.00 0.00 3.36
274 275 4.629200 GCTGTTTCTGAGATGTACTTCCTG 59.371 45.833 5.19 2.62 0.00 3.86
275 276 5.788450 CTGTTTCTGAGATGTACTTCCTGT 58.212 41.667 5.19 0.00 0.00 4.00
276 277 6.572509 GCTGTTTCTGAGATGTACTTCCTGTA 60.573 42.308 5.19 0.00 0.00 2.74
277 278 7.297936 TGTTTCTGAGATGTACTTCCTGTAA 57.702 36.000 5.19 0.71 32.25 2.41
278 279 7.732025 TGTTTCTGAGATGTACTTCCTGTAAA 58.268 34.615 5.19 0.51 32.25 2.01
279 280 8.375506 TGTTTCTGAGATGTACTTCCTGTAAAT 58.624 33.333 5.19 0.00 32.00 1.40
280 281 9.871238 GTTTCTGAGATGTACTTCCTGTAAATA 57.129 33.333 5.19 0.00 29.58 1.40
281 282 9.871238 TTTCTGAGATGTACTTCCTGTAAATAC 57.129 33.333 5.19 0.00 29.58 1.89
282 283 8.589701 TCTGAGATGTACTTCCTGTAAATACA 57.410 34.615 5.19 0.00 29.58 2.29
294 295 4.153958 TGTAAATACAGCTGTTTTGCGG 57.846 40.909 27.06 0.00 38.13 5.69
295 296 3.566322 TGTAAATACAGCTGTTTTGCGGT 59.434 39.130 27.06 10.66 43.22 5.68
296 297 4.755629 TGTAAATACAGCTGTTTTGCGGTA 59.244 37.500 27.06 9.64 44.72 4.02
297 298 4.839668 AAATACAGCTGTTTTGCGGTAA 57.160 36.364 27.06 3.23 44.07 2.85
298 299 4.839668 AATACAGCTGTTTTGCGGTAAA 57.160 36.364 27.06 2.37 44.07 2.01
299 300 5.385509 AATACAGCTGTTTTGCGGTAAAT 57.614 34.783 27.06 5.04 44.07 1.40
300 301 3.011949 ACAGCTGTTTTGCGGTAAATG 57.988 42.857 15.25 0.00 39.40 2.32
301 302 2.288152 ACAGCTGTTTTGCGGTAAATGG 60.288 45.455 15.25 0.00 39.40 3.16
302 303 1.067693 GCTGTTTTGCGGTAAATGGC 58.932 50.000 0.00 0.00 0.00 4.40
303 304 1.335935 CTGTTTTGCGGTAAATGGCG 58.664 50.000 0.00 0.00 0.00 5.69
304 305 0.664767 TGTTTTGCGGTAAATGGCGC 60.665 50.000 0.00 0.00 0.00 6.53
305 306 0.664767 GTTTTGCGGTAAATGGCGCA 60.665 50.000 10.83 0.00 35.48 6.09
306 307 0.032130 TTTTGCGGTAAATGGCGCAA 59.968 45.000 10.83 0.00 44.05 4.85
307 308 0.244994 TTTGCGGTAAATGGCGCAAT 59.755 45.000 10.83 0.00 44.86 3.56
308 309 1.095600 TTGCGGTAAATGGCGCAATA 58.904 45.000 10.83 0.00 41.48 1.90
309 310 0.378962 TGCGGTAAATGGCGCAATAC 59.621 50.000 10.83 6.16 34.30 1.89
310 311 0.378962 GCGGTAAATGGCGCAATACA 59.621 50.000 10.83 0.00 0.00 2.29
311 312 1.001815 GCGGTAAATGGCGCAATACAT 60.002 47.619 10.83 0.00 0.00 2.29
312 313 2.542824 GCGGTAAATGGCGCAATACATT 60.543 45.455 10.83 6.77 38.85 2.71
313 314 3.701241 CGGTAAATGGCGCAATACATTT 58.299 40.909 20.82 20.82 45.96 2.32
314 315 4.109050 CGGTAAATGGCGCAATACATTTT 58.891 39.130 21.78 6.60 42.78 1.82
315 316 4.026968 CGGTAAATGGCGCAATACATTTTG 60.027 41.667 21.78 12.06 42.78 2.44
316 317 4.260172 GGTAAATGGCGCAATACATTTTGC 60.260 41.667 21.78 16.11 42.78 3.68
324 325 2.273557 CAATACATTTTGCAGCCCAGC 58.726 47.619 0.00 0.00 0.00 4.85
325 326 1.856629 ATACATTTTGCAGCCCAGCT 58.143 45.000 0.00 0.00 40.77 4.24
337 338 3.439857 AGCCCAGCTGATTTAACTTCA 57.560 42.857 17.39 0.00 37.57 3.02
338 339 3.084786 AGCCCAGCTGATTTAACTTCAC 58.915 45.455 17.39 0.00 37.57 3.18
339 340 3.084786 GCCCAGCTGATTTAACTTCACT 58.915 45.455 17.39 0.00 0.00 3.41
340 341 3.119708 GCCCAGCTGATTTAACTTCACTG 60.120 47.826 17.39 0.00 0.00 3.66
341 342 4.326826 CCCAGCTGATTTAACTTCACTGA 58.673 43.478 17.39 0.00 30.51 3.41
342 343 4.394300 CCCAGCTGATTTAACTTCACTGAG 59.606 45.833 17.39 0.00 30.51 3.35
343 344 4.394300 CCAGCTGATTTAACTTCACTGAGG 59.606 45.833 17.39 0.00 30.51 3.86
344 345 4.394300 CAGCTGATTTAACTTCACTGAGGG 59.606 45.833 8.42 0.00 30.51 4.30
345 346 4.042187 AGCTGATTTAACTTCACTGAGGGT 59.958 41.667 0.00 0.00 0.00 4.34
346 347 4.154918 GCTGATTTAACTTCACTGAGGGTG 59.845 45.833 0.00 0.00 46.60 4.61
347 348 5.304686 TGATTTAACTTCACTGAGGGTGT 57.695 39.130 0.00 0.00 45.50 4.16
348 349 5.690865 TGATTTAACTTCACTGAGGGTGTT 58.309 37.500 2.21 2.21 45.50 3.32
349 350 6.833041 TGATTTAACTTCACTGAGGGTGTTA 58.167 36.000 0.00 0.60 45.50 2.41
350 351 6.708949 TGATTTAACTTCACTGAGGGTGTTAC 59.291 38.462 3.47 0.00 45.50 2.50
351 352 5.881923 TTAACTTCACTGAGGGTGTTACT 57.118 39.130 3.47 0.00 45.50 2.24
352 353 3.753294 ACTTCACTGAGGGTGTTACTG 57.247 47.619 0.00 0.00 45.50 2.74
353 354 3.305720 ACTTCACTGAGGGTGTTACTGA 58.694 45.455 0.00 0.00 45.50 3.41
354 355 3.069729 ACTTCACTGAGGGTGTTACTGAC 59.930 47.826 0.00 0.00 45.50 3.51
355 356 2.958818 TCACTGAGGGTGTTACTGACT 58.041 47.619 0.00 0.00 45.50 3.41
356 357 3.305720 TCACTGAGGGTGTTACTGACTT 58.694 45.455 0.00 0.00 45.50 3.01
357 358 3.069586 TCACTGAGGGTGTTACTGACTTG 59.930 47.826 0.00 0.00 45.50 3.16
358 359 3.039011 ACTGAGGGTGTTACTGACTTGT 58.961 45.455 0.00 0.00 0.00 3.16
359 360 3.454812 ACTGAGGGTGTTACTGACTTGTT 59.545 43.478 0.00 0.00 0.00 2.83
360 361 4.058817 CTGAGGGTGTTACTGACTTGTTC 58.941 47.826 0.00 0.00 0.00 3.18
361 362 3.452990 TGAGGGTGTTACTGACTTGTTCA 59.547 43.478 0.00 0.00 0.00 3.18
362 363 4.102524 TGAGGGTGTTACTGACTTGTTCAT 59.897 41.667 0.00 0.00 32.17 2.57
363 364 5.048846 AGGGTGTTACTGACTTGTTCATT 57.951 39.130 0.00 0.00 32.17 2.57
364 365 5.445964 AGGGTGTTACTGACTTGTTCATTT 58.554 37.500 0.00 0.00 32.17 2.32
365 366 5.891551 AGGGTGTTACTGACTTGTTCATTTT 59.108 36.000 0.00 0.00 32.17 1.82
366 367 5.977129 GGGTGTTACTGACTTGTTCATTTTG 59.023 40.000 0.00 0.00 32.17 2.44
367 368 6.405397 GGGTGTTACTGACTTGTTCATTTTGT 60.405 38.462 0.00 0.00 32.17 2.83
368 369 6.472163 GGTGTTACTGACTTGTTCATTTTGTG 59.528 38.462 0.00 0.00 32.17 3.33
369 370 7.247728 GTGTTACTGACTTGTTCATTTTGTGA 58.752 34.615 0.00 0.00 32.17 3.58
370 371 7.429340 GTGTTACTGACTTGTTCATTTTGTGAG 59.571 37.037 0.00 0.00 38.29 3.51
371 372 7.335673 TGTTACTGACTTGTTCATTTTGTGAGA 59.664 33.333 0.00 0.00 38.29 3.27
372 373 6.757897 ACTGACTTGTTCATTTTGTGAGAA 57.242 33.333 0.00 0.00 38.29 2.87
379 380 4.161189 TGTTCATTTTGTGAGAAAGGGCAA 59.839 37.500 0.00 0.00 38.29 4.52
450 451 9.075678 AGAAAAACAAAATGAGAGAGATGTCAT 57.924 29.630 0.00 0.00 34.79 3.06
504 515 1.610522 GTTCAGTGATGCACAAGGCTT 59.389 47.619 0.00 0.00 45.15 4.35
505 516 1.241165 TCAGTGATGCACAAGGCTTG 58.759 50.000 25.06 25.06 45.15 4.01
584 595 2.951726 TCAGAGAGCTCATGTTCAACG 58.048 47.619 17.77 0.00 0.00 4.10
605 616 6.126568 ACGAAGTTACTTGCTAAGCAAAAA 57.873 33.333 0.93 0.00 44.14 1.94
613 624 1.690893 TGCTAAGCAAAAATGTGGCCA 59.309 42.857 0.00 0.00 34.76 5.36
616 627 1.525941 AAGCAAAAATGTGGCCATGC 58.474 45.000 17.21 17.21 0.00 4.06
619 630 1.198178 GCAAAAATGTGGCCATGCTTG 59.802 47.619 17.56 13.47 31.38 4.01
622 633 1.636148 AAATGTGGCCATGCTTGTCT 58.364 45.000 9.72 0.00 0.00 3.41
687 698 4.152402 GTCTAGTCAATTTCACATGTGCGT 59.848 41.667 21.38 6.31 0.00 5.24
736 769 4.715896 CGATCTTGTTGTCACATCAAAGG 58.284 43.478 2.95 0.00 31.06 3.11
767 800 6.904654 AGTACCTAACTACCCAATCCATACAA 59.095 38.462 0.00 0.00 36.36 2.41
777 810 3.068590 CCAATCCATACAATCCAAGTGGC 59.931 47.826 0.00 0.00 34.44 5.01
785 818 1.542915 CAATCCAAGTGGCTGGTCTTG 59.457 52.381 0.00 0.00 40.19 3.02
882 921 6.053632 TGACCAGAAGCATCTCAAAATCTA 57.946 37.500 0.00 0.00 32.03 1.98
918 957 2.349275 TGCGAAGAAACGTCGAACTTTT 59.651 40.909 10.67 0.00 41.02 2.27
964 1003 3.268595 TCCCCTTTTGTAATCTTCTCCCC 59.731 47.826 0.00 0.00 0.00 4.81
1052 1108 9.194972 TCCAAAATGGTATATTATCTGTTTGCA 57.805 29.630 0.00 0.00 39.03 4.08
1103 1170 8.712285 AAGTTGCTTTCCATATGATTGATTTG 57.288 30.769 3.65 0.00 0.00 2.32
1112 1179 8.706492 TCCATATGATTGATTTGTTTTTGAGC 57.294 30.769 3.65 0.00 0.00 4.26
1196 1265 1.901159 TGGCATGGTTTCCATTGAAGG 59.099 47.619 0.00 0.00 42.23 3.46
1212 1281 2.918934 TGAAGGGGATGGAACTCATGAA 59.081 45.455 0.00 0.00 35.97 2.57
1242 1311 1.482593 ACGATCCGGATTCAGAAAGCT 59.517 47.619 20.22 0.00 0.00 3.74
1263 1332 1.739562 CGAGTTCACAGCCAGCTCC 60.740 63.158 0.00 0.00 0.00 4.70
1334 1403 7.466996 GCATCATATACTCATATTCTTGGCTGC 60.467 40.741 0.00 0.00 0.00 5.25
1355 1424 3.138304 CGTTCTTCTTGATGGTGGTTGA 58.862 45.455 0.00 0.00 0.00 3.18
1403 1475 1.391485 CTTTCGCGAAGATGTCTGTGG 59.609 52.381 22.21 0.35 37.57 4.17
1456 1528 1.299541 AGTTCGACTTGCTGGTTGTG 58.700 50.000 0.00 0.00 0.00 3.33
1480 1552 2.154462 CTGCAAGAAGTCCCGAAATGT 58.846 47.619 0.00 0.00 34.07 2.71
1492 1564 0.233590 CGAAATGTGGCGTCGAACAA 59.766 50.000 0.00 0.00 36.92 2.83
1540 1612 2.154462 CACATGTGAGGGACCTTCAAC 58.846 52.381 21.64 3.82 0.00 3.18
1608 1680 5.069318 TCTGAAATACAGCAATGGTTGTCA 58.931 37.500 0.00 0.00 45.38 3.58
1633 1705 4.771590 TTTCAGCTTGTTATGCCAGAAG 57.228 40.909 0.00 0.00 0.00 2.85
1701 1773 3.610040 AGCGTACATCAAAGGTGATCA 57.390 42.857 0.00 0.00 42.88 2.92
1758 1830 7.879677 TGAAAGAGCACTTCTAATCTGATCAAA 59.120 33.333 0.00 0.00 34.14 2.69
1764 1836 9.323985 AGCACTTCTAATCTGATCAAATAAGTC 57.676 33.333 0.00 0.00 0.00 3.01
1765 1837 8.555361 GCACTTCTAATCTGATCAAATAAGTCC 58.445 37.037 0.00 0.00 0.00 3.85
1787 1859 7.728532 AGTCCTGTTTAAATACCTGAATTTGGT 59.271 33.333 8.74 8.74 41.28 3.67
1805 1877 3.689347 TGGTCAGAAATGAAGGTGGATG 58.311 45.455 0.00 0.00 0.00 3.51
1876 1948 3.478509 TGTGGCCATGTACGTAAACTTT 58.521 40.909 9.72 0.00 0.00 2.66
1928 2000 3.258872 CCATCTTGCAGGTTGATTTCCAA 59.741 43.478 8.37 0.00 0.00 3.53
1982 2069 7.153315 GGTCTTATTACCTCAGTGCTAATACC 58.847 42.308 0.00 0.00 36.53 2.73
1984 2071 4.602340 ATTACCTCAGTGCTAATACCGG 57.398 45.455 0.00 0.00 0.00 5.28
1993 2080 2.943033 GTGCTAATACCGGAAGCAACAT 59.057 45.455 21.00 0.00 47.00 2.71
1999 2086 7.147983 TGCTAATACCGGAAGCAACATTAATTT 60.148 33.333 9.46 0.00 42.96 1.82
2004 2091 9.744468 ATACCGGAAGCAACATTAATTTAATTC 57.256 29.630 9.46 0.00 0.00 2.17
2005 2092 7.607250 ACCGGAAGCAACATTAATTTAATTCA 58.393 30.769 9.46 0.00 0.00 2.57
2079 2166 6.315393 ACTTATTAAAGTGTAGCCCATGAACG 59.685 38.462 0.00 0.00 44.40 3.95
2233 2320 1.308069 GCTCGATGCCAGCAAGGAAA 61.308 55.000 0.00 0.00 41.22 3.13
2254 2341 0.670706 TGATCGAGGAGAATCGCCAG 59.329 55.000 5.69 0.00 42.43 4.85
2319 2406 3.893326 ATGCCTGACATATATGCGCTA 57.107 42.857 12.79 0.00 37.17 4.26
2376 2463 2.301583 AGAAGCTGAGAAGGGTCAAGTC 59.698 50.000 0.00 0.00 0.00 3.01
2380 2467 2.614229 GCTGAGAAGGGTCAAGTCTTCC 60.614 54.545 0.00 0.00 39.97 3.46
2484 2571 8.834004 ACAAGGTACCTTCAGTTAGTATCATA 57.166 34.615 24.73 0.00 33.42 2.15
2658 2745 7.746475 GTGTTAAGTTCATATGAAGCACTTGAC 59.254 37.037 23.69 23.69 33.35 3.18
2713 2800 7.663081 TGAAAGCTCATCTTTGTCTGAAAGTAT 59.337 33.333 0.00 0.00 44.58 2.12
2830 2917 7.172868 AGCACAGATCATTATCTATCCTCTG 57.827 40.000 0.00 0.00 40.65 3.35
2846 2933 8.204160 TCTATCCTCTGAAAATGATTTCGCTAA 58.796 33.333 0.00 0.00 46.47 3.09
2873 2960 8.789881 TGTAATTTGGTAAAGTCAAAATGTCG 57.210 30.769 0.00 0.00 37.60 4.35
2879 2966 4.685628 GGTAAAGTCAAAATGTCGACCGTA 59.314 41.667 14.12 0.00 32.33 4.02
2881 2968 4.921470 AAGTCAAAATGTCGACCGTATG 57.079 40.909 14.12 7.58 32.33 2.39
2895 2982 4.319190 CGACCGTATGTTCATGTTGTTGTT 60.319 41.667 0.00 0.00 0.00 2.83
2896 2983 4.854399 ACCGTATGTTCATGTTGTTGTTG 58.146 39.130 0.00 0.00 0.00 3.33
2897 2984 4.336993 ACCGTATGTTCATGTTGTTGTTGT 59.663 37.500 0.00 0.00 0.00 3.32
2898 2985 5.163602 ACCGTATGTTCATGTTGTTGTTGTT 60.164 36.000 0.00 0.00 0.00 2.83
2899 2986 5.172951 CCGTATGTTCATGTTGTTGTTGTTG 59.827 40.000 0.00 0.00 0.00 3.33
2901 2988 6.252441 CGTATGTTCATGTTGTTGTTGTTGTT 59.748 34.615 0.00 0.00 0.00 2.83
2902 2989 5.835911 TGTTCATGTTGTTGTTGTTGTTG 57.164 34.783 0.00 0.00 0.00 3.33
2903 2990 5.292765 TGTTCATGTTGTTGTTGTTGTTGT 58.707 33.333 0.00 0.00 0.00 3.32
2904 2991 5.755375 TGTTCATGTTGTTGTTGTTGTTGTT 59.245 32.000 0.00 0.00 0.00 2.83
2905 2992 5.835911 TCATGTTGTTGTTGTTGTTGTTG 57.164 34.783 0.00 0.00 0.00 3.33
2906 2993 5.292765 TCATGTTGTTGTTGTTGTTGTTGT 58.707 33.333 0.00 0.00 0.00 3.32
2907 2994 5.755375 TCATGTTGTTGTTGTTGTTGTTGTT 59.245 32.000 0.00 0.00 0.00 2.83
2908 2995 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2909 2996 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2910 2997 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2911 2998 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2912 2999 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2913 3000 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2914 3001 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2915 3002 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2916 3003 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2917 3004 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2918 3005 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2919 3006 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2920 3007 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2921 3008 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2922 3009 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
2923 3010 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
2924 3011 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
2925 3012 5.193936 GTTGTTGTTGTTGTTGTTGTTGTG 58.806 37.500 0.00 0.00 0.00 3.33
2926 3013 4.433615 TGTTGTTGTTGTTGTTGTTGTGT 58.566 34.783 0.00 0.00 0.00 3.72
2927 3014 5.588240 TGTTGTTGTTGTTGTTGTTGTGTA 58.412 33.333 0.00 0.00 0.00 2.90
2928 3015 5.459107 TGTTGTTGTTGTTGTTGTTGTGTAC 59.541 36.000 0.00 0.00 0.00 2.90
2933 3020 3.637911 TGTTGTTGTTGTGTACCCTCT 57.362 42.857 0.00 0.00 0.00 3.69
2938 3025 4.787551 TGTTGTTGTGTACCCTCTTGATT 58.212 39.130 0.00 0.00 0.00 2.57
2952 3039 6.055588 CCCTCTTGATTTTATATGGTGACGT 58.944 40.000 0.00 0.00 0.00 4.34
2965 3052 3.142951 TGGTGACGTGGATTTTTCGAAT 58.857 40.909 0.00 0.00 0.00 3.34
2966 3053 3.566322 TGGTGACGTGGATTTTTCGAATT 59.434 39.130 0.00 0.00 0.00 2.17
2971 3058 3.566322 ACGTGGATTTTTCGAATTGGTCA 59.434 39.130 0.00 0.00 0.00 4.02
2991 3082 2.030805 CAGCAGGCTACAAACAACTTCC 60.031 50.000 0.00 0.00 0.00 3.46
3074 3165 6.167685 GGTTAATACACACAGTACCATGTCA 58.832 40.000 0.00 0.00 35.05 3.58
3110 3201 6.927936 TGACATAGCAGAGCAGATTCTTTATC 59.072 38.462 0.00 0.00 0.00 1.75
3119 3210 5.191426 AGCAGATTCTTTATCACAGCACAT 58.809 37.500 0.00 0.00 35.59 3.21
3120 3211 5.651139 AGCAGATTCTTTATCACAGCACATT 59.349 36.000 0.00 0.00 35.59 2.71
3121 3212 5.742453 GCAGATTCTTTATCACAGCACATTG 59.258 40.000 0.00 0.00 35.59 2.82
3123 3214 7.310664 CAGATTCTTTATCACAGCACATTGTT 58.689 34.615 0.00 0.00 35.59 2.83
3125 3216 8.025445 AGATTCTTTATCACAGCACATTGTTTC 58.975 33.333 0.00 0.00 35.59 2.78
3145 3422 5.538849 TTCATGGGGTTTAAGGTTCAAAC 57.461 39.130 0.00 0.00 35.57 2.93
3147 3424 5.212745 TCATGGGGTTTAAGGTTCAAACTT 58.787 37.500 0.00 0.00 36.38 2.66
3148 3425 5.663556 TCATGGGGTTTAAGGTTCAAACTTT 59.336 36.000 0.00 0.00 36.38 2.66
3198 3477 9.522804 TTAATTTTCAAGAACAGTATGCGTTTT 57.477 25.926 0.00 0.00 42.53 2.43
3205 3484 5.699839 AGAACAGTATGCGTTTTGATTTCC 58.300 37.500 0.00 0.00 42.53 3.13
3209 3488 5.221342 ACAGTATGCGTTTTGATTTCCCAAA 60.221 36.000 0.00 0.00 42.53 3.28
3244 3527 7.716612 AGGAACACAATTCTTAACTTTCTTGG 58.283 34.615 0.00 0.00 0.00 3.61
3246 3529 8.360390 GGAACACAATTCTTAACTTTCTTGGAT 58.640 33.333 0.00 0.00 0.00 3.41
3297 3580 8.584157 AGTACAGATTTGCATTTGGAATAAACA 58.416 29.630 0.00 0.00 0.00 2.83
3302 3585 9.807649 AGATTTGCATTTGGAATAAACATCTAC 57.192 29.630 0.00 0.00 0.00 2.59
3303 3586 9.807649 GATTTGCATTTGGAATAAACATCTACT 57.192 29.630 0.00 0.00 0.00 2.57
3305 3588 8.984891 TTGCATTTGGAATAAACATCTACTTG 57.015 30.769 0.00 0.00 0.00 3.16
3306 3589 8.121305 TGCATTTGGAATAAACATCTACTTGT 57.879 30.769 0.00 0.00 0.00 3.16
3307 3590 8.243426 TGCATTTGGAATAAACATCTACTTGTC 58.757 33.333 0.00 0.00 0.00 3.18
3308 3591 8.462016 GCATTTGGAATAAACATCTACTTGTCT 58.538 33.333 0.00 0.00 0.00 3.41
3336 3619 9.844790 GTATATAAGGGTGTACCAAAACAAAAC 57.155 33.333 3.11 0.00 43.89 2.43
3384 3667 5.105567 TGGTACAGAAACAAGGAAACTCA 57.894 39.130 0.00 0.00 42.68 3.41
3389 3672 3.377172 CAGAAACAAGGAAACTCAACGGT 59.623 43.478 0.00 0.00 42.68 4.83
3390 3673 4.014406 AGAAACAAGGAAACTCAACGGTT 58.986 39.130 0.00 0.00 42.68 4.44
3391 3674 4.095932 AGAAACAAGGAAACTCAACGGTTC 59.904 41.667 0.00 0.00 42.68 3.62
3420 3703 4.957296 ACGGTTTGAGTACAGAAACAGAT 58.043 39.130 19.44 7.49 0.00 2.90
3528 3812 4.919754 GGCTTTCAGCTACAAAAGAATGTG 59.080 41.667 15.76 0.00 41.99 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.417515 GCTAGGTCACCGAAGAAGAAGG 60.418 54.545 3.52 0.00 0.00 3.46
1 2 2.417515 GGCTAGGTCACCGAAGAAGAAG 60.418 54.545 3.52 0.00 0.00 2.85
2 3 1.549170 GGCTAGGTCACCGAAGAAGAA 59.451 52.381 3.52 0.00 0.00 2.52
3 4 1.183549 GGCTAGGTCACCGAAGAAGA 58.816 55.000 3.52 0.00 0.00 2.87
5 6 0.895530 CTGGCTAGGTCACCGAAGAA 59.104 55.000 3.52 0.00 0.00 2.52
6 7 0.970937 CCTGGCTAGGTCACCGAAGA 60.971 60.000 8.21 0.00 39.39 2.87
7 8 1.517832 CCTGGCTAGGTCACCGAAG 59.482 63.158 8.21 0.00 39.39 3.79
8 9 2.656069 GCCTGGCTAGGTCACCGAA 61.656 63.158 18.47 0.00 46.41 4.30
9 10 3.075005 GCCTGGCTAGGTCACCGA 61.075 66.667 18.47 0.00 46.41 4.69
24 25 4.162690 ATCTTCGACTGCCCGGCC 62.163 66.667 7.03 0.00 0.00 6.13
25 26 2.586357 GATCTTCGACTGCCCGGC 60.586 66.667 1.04 1.04 0.00 6.13
26 27 2.278857 CGATCTTCGACTGCCCGG 60.279 66.667 0.00 0.00 43.74 5.73
27 28 2.956964 GCGATCTTCGACTGCCCG 60.957 66.667 0.32 0.00 43.74 6.13
28 29 1.880340 CAGCGATCTTCGACTGCCC 60.880 63.158 0.32 0.00 43.74 5.36
29 30 1.153745 ACAGCGATCTTCGACTGCC 60.154 57.895 15.91 0.00 43.74 4.85
30 31 1.994467 CACAGCGATCTTCGACTGC 59.006 57.895 15.91 0.00 43.74 4.40
31 32 0.457509 AGCACAGCGATCTTCGACTG 60.458 55.000 14.99 14.99 43.74 3.51
32 33 1.064803 CTAGCACAGCGATCTTCGACT 59.935 52.381 0.32 0.00 43.74 4.18
33 34 1.064208 TCTAGCACAGCGATCTTCGAC 59.936 52.381 0.32 0.00 43.74 4.20
34 35 1.379527 TCTAGCACAGCGATCTTCGA 58.620 50.000 0.32 0.00 43.74 3.71
35 36 2.287248 TGATCTAGCACAGCGATCTTCG 60.287 50.000 0.00 0.00 43.89 3.79
36 37 3.049206 GTGATCTAGCACAGCGATCTTC 58.951 50.000 0.00 0.00 38.63 2.87
37 38 2.223923 GGTGATCTAGCACAGCGATCTT 60.224 50.000 0.33 0.00 40.52 2.40
38 39 1.339610 GGTGATCTAGCACAGCGATCT 59.660 52.381 0.33 0.00 40.52 2.75
39 40 1.067669 TGGTGATCTAGCACAGCGATC 59.932 52.381 0.33 0.00 40.52 3.69
40 41 1.114627 TGGTGATCTAGCACAGCGAT 58.885 50.000 0.33 0.00 40.52 4.58
41 42 2.578683 TGGTGATCTAGCACAGCGA 58.421 52.632 0.33 0.00 40.52 4.93
47 48 3.578282 TCAAAGTCAGTGGTGATCTAGCA 59.422 43.478 0.00 0.00 34.36 3.49
48 49 4.180057 CTCAAAGTCAGTGGTGATCTAGC 58.820 47.826 0.00 0.00 34.36 3.42
49 50 4.180057 GCTCAAAGTCAGTGGTGATCTAG 58.820 47.826 0.00 0.00 34.36 2.43
50 51 3.578282 TGCTCAAAGTCAGTGGTGATCTA 59.422 43.478 0.00 0.00 34.36 1.98
51 52 2.369860 TGCTCAAAGTCAGTGGTGATCT 59.630 45.455 0.00 0.00 34.36 2.75
52 53 2.481952 GTGCTCAAAGTCAGTGGTGATC 59.518 50.000 0.00 0.00 34.36 2.92
53 54 2.498167 GTGCTCAAAGTCAGTGGTGAT 58.502 47.619 0.00 0.00 34.36 3.06
54 55 1.475034 GGTGCTCAAAGTCAGTGGTGA 60.475 52.381 0.00 0.00 0.00 4.02
55 56 0.947244 GGTGCTCAAAGTCAGTGGTG 59.053 55.000 0.00 0.00 0.00 4.17
56 57 0.546122 TGGTGCTCAAAGTCAGTGGT 59.454 50.000 0.00 0.00 0.00 4.16
57 58 0.947244 GTGGTGCTCAAAGTCAGTGG 59.053 55.000 0.00 0.00 0.00 4.00
58 59 0.947244 GGTGGTGCTCAAAGTCAGTG 59.053 55.000 0.00 0.00 0.00 3.66
59 60 0.839946 AGGTGGTGCTCAAAGTCAGT 59.160 50.000 0.00 0.00 0.00 3.41
60 61 1.202687 TCAGGTGGTGCTCAAAGTCAG 60.203 52.381 0.00 0.00 0.00 3.51
61 62 0.836606 TCAGGTGGTGCTCAAAGTCA 59.163 50.000 0.00 0.00 0.00 3.41
62 63 1.230324 GTCAGGTGGTGCTCAAAGTC 58.770 55.000 0.00 0.00 0.00 3.01
63 64 0.532862 CGTCAGGTGGTGCTCAAAGT 60.533 55.000 0.00 0.00 0.00 2.66
64 65 0.249868 TCGTCAGGTGGTGCTCAAAG 60.250 55.000 0.00 0.00 0.00 2.77
65 66 0.179234 TTCGTCAGGTGGTGCTCAAA 59.821 50.000 0.00 0.00 0.00 2.69
66 67 0.249868 CTTCGTCAGGTGGTGCTCAA 60.250 55.000 0.00 0.00 0.00 3.02
67 68 1.112916 TCTTCGTCAGGTGGTGCTCA 61.113 55.000 0.00 0.00 0.00 4.26
68 69 0.667792 GTCTTCGTCAGGTGGTGCTC 60.668 60.000 0.00 0.00 0.00 4.26
69 70 1.367840 GTCTTCGTCAGGTGGTGCT 59.632 57.895 0.00 0.00 0.00 4.40
70 71 1.668151 GGTCTTCGTCAGGTGGTGC 60.668 63.158 0.00 0.00 0.00 5.01
71 72 1.372997 CGGTCTTCGTCAGGTGGTG 60.373 63.158 0.00 0.00 0.00 4.17
72 73 3.048602 CGGTCTTCGTCAGGTGGT 58.951 61.111 0.00 0.00 0.00 4.16
81 82 1.444553 GCAGGAGTGACGGTCTTCG 60.445 63.158 9.88 0.00 45.88 3.79
82 83 0.667792 GTGCAGGAGTGACGGTCTTC 60.668 60.000 9.88 7.12 0.00 2.87
83 84 1.367840 GTGCAGGAGTGACGGTCTT 59.632 57.895 9.88 0.00 0.00 3.01
84 85 1.832608 TGTGCAGGAGTGACGGTCT 60.833 57.895 9.88 0.00 0.00 3.85
85 86 1.664965 GTGTGCAGGAGTGACGGTC 60.665 63.158 0.00 0.00 0.00 4.79
86 87 1.758440 ATGTGTGCAGGAGTGACGGT 61.758 55.000 0.00 0.00 0.00 4.83
87 88 1.004560 ATGTGTGCAGGAGTGACGG 60.005 57.895 0.00 0.00 0.00 4.79
88 89 0.037882 AGATGTGTGCAGGAGTGACG 60.038 55.000 0.00 0.00 0.00 4.35
89 90 1.674221 GGAGATGTGTGCAGGAGTGAC 60.674 57.143 0.00 0.00 0.00 3.67
90 91 0.610174 GGAGATGTGTGCAGGAGTGA 59.390 55.000 0.00 0.00 0.00 3.41
91 92 0.612229 AGGAGATGTGTGCAGGAGTG 59.388 55.000 0.00 0.00 0.00 3.51
92 93 1.356124 AAGGAGATGTGTGCAGGAGT 58.644 50.000 0.00 0.00 0.00 3.85
93 94 2.082231 CAAAGGAGATGTGTGCAGGAG 58.918 52.381 0.00 0.00 0.00 3.69
94 95 1.883638 GCAAAGGAGATGTGTGCAGGA 60.884 52.381 0.00 0.00 35.28 3.86
95 96 0.524862 GCAAAGGAGATGTGTGCAGG 59.475 55.000 0.00 0.00 35.28 4.85
96 97 0.524862 GGCAAAGGAGATGTGTGCAG 59.475 55.000 0.00 0.00 36.93 4.41
97 98 0.178995 TGGCAAAGGAGATGTGTGCA 60.179 50.000 0.00 0.00 36.93 4.57
98 99 1.133790 GATGGCAAAGGAGATGTGTGC 59.866 52.381 0.00 0.00 34.42 4.57
99 100 1.747355 GGATGGCAAAGGAGATGTGTG 59.253 52.381 0.00 0.00 0.00 3.82
100 101 1.341383 GGGATGGCAAAGGAGATGTGT 60.341 52.381 0.00 0.00 0.00 3.72
101 102 1.341285 TGGGATGGCAAAGGAGATGTG 60.341 52.381 0.00 0.00 0.00 3.21
102 103 1.002069 TGGGATGGCAAAGGAGATGT 58.998 50.000 0.00 0.00 0.00 3.06
103 104 1.396653 GTGGGATGGCAAAGGAGATG 58.603 55.000 0.00 0.00 0.00 2.90
104 105 0.259938 GGTGGGATGGCAAAGGAGAT 59.740 55.000 0.00 0.00 0.00 2.75
105 106 1.691219 GGTGGGATGGCAAAGGAGA 59.309 57.895 0.00 0.00 0.00 3.71
106 107 1.380380 GGGTGGGATGGCAAAGGAG 60.380 63.158 0.00 0.00 0.00 3.69
107 108 2.166346 TGGGTGGGATGGCAAAGGA 61.166 57.895 0.00 0.00 0.00 3.36
108 109 1.984026 GTGGGTGGGATGGCAAAGG 60.984 63.158 0.00 0.00 0.00 3.11
109 110 1.984026 GGTGGGTGGGATGGCAAAG 60.984 63.158 0.00 0.00 0.00 2.77
110 111 2.119391 GGTGGGTGGGATGGCAAA 59.881 61.111 0.00 0.00 0.00 3.68
111 112 3.188903 TGGTGGGTGGGATGGCAA 61.189 61.111 0.00 0.00 0.00 4.52
112 113 3.978193 GTGGTGGGTGGGATGGCA 61.978 66.667 0.00 0.00 0.00 4.92
113 114 3.944250 CTGTGGTGGGTGGGATGGC 62.944 68.421 0.00 0.00 0.00 4.40
114 115 2.356278 CTGTGGTGGGTGGGATGG 59.644 66.667 0.00 0.00 0.00 3.51
115 116 2.361610 GCTGTGGTGGGTGGGATG 60.362 66.667 0.00 0.00 0.00 3.51
116 117 3.661648 GGCTGTGGTGGGTGGGAT 61.662 66.667 0.00 0.00 0.00 3.85
119 120 2.933287 TAGGGCTGTGGTGGGTGG 60.933 66.667 0.00 0.00 0.00 4.61
120 121 2.351276 GTAGGGCTGTGGTGGGTG 59.649 66.667 0.00 0.00 0.00 4.61
121 122 2.122144 TGTAGGGCTGTGGTGGGT 60.122 61.111 0.00 0.00 0.00 4.51
122 123 2.351276 GTGTAGGGCTGTGGTGGG 59.649 66.667 0.00 0.00 0.00 4.61
123 124 1.302511 GTGTGTAGGGCTGTGGTGG 60.303 63.158 0.00 0.00 0.00 4.61
124 125 0.884704 GTGTGTGTAGGGCTGTGGTG 60.885 60.000 0.00 0.00 0.00 4.17
125 126 1.341913 TGTGTGTGTAGGGCTGTGGT 61.342 55.000 0.00 0.00 0.00 4.16
126 127 0.603707 CTGTGTGTGTAGGGCTGTGG 60.604 60.000 0.00 0.00 0.00 4.17
127 128 0.603707 CCTGTGTGTGTAGGGCTGTG 60.604 60.000 0.00 0.00 0.00 3.66
128 129 1.754745 CCTGTGTGTGTAGGGCTGT 59.245 57.895 0.00 0.00 0.00 4.40
129 130 1.672356 GCCTGTGTGTGTAGGGCTG 60.672 63.158 0.00 0.00 39.68 4.85
130 131 1.843376 AGCCTGTGTGTGTAGGGCT 60.843 57.895 0.00 0.00 46.95 5.19
131 132 1.672356 CAGCCTGTGTGTGTAGGGC 60.672 63.158 0.00 0.00 42.74 5.19
132 133 1.672356 GCAGCCTGTGTGTGTAGGG 60.672 63.158 0.00 0.00 34.58 3.53
133 134 1.672356 GGCAGCCTGTGTGTGTAGG 60.672 63.158 3.29 0.00 37.14 3.18
134 135 1.672356 GGGCAGCCTGTGTGTGTAG 60.672 63.158 12.43 0.00 0.00 2.74
135 136 2.111999 GAGGGCAGCCTGTGTGTGTA 62.112 60.000 12.43 0.00 0.00 2.90
136 137 3.482232 GAGGGCAGCCTGTGTGTGT 62.482 63.158 12.43 0.00 0.00 3.72
137 138 2.670934 GAGGGCAGCCTGTGTGTG 60.671 66.667 12.43 0.00 0.00 3.82
138 139 1.127567 TAAGAGGGCAGCCTGTGTGT 61.128 55.000 12.43 0.00 0.00 3.72
139 140 0.674895 GTAAGAGGGCAGCCTGTGTG 60.675 60.000 12.43 0.00 0.00 3.82
140 141 1.679898 GTAAGAGGGCAGCCTGTGT 59.320 57.895 12.43 0.00 0.00 3.72
141 142 1.448540 CGTAAGAGGGCAGCCTGTG 60.449 63.158 12.43 0.00 43.02 3.66
142 143 0.613853 TACGTAAGAGGGCAGCCTGT 60.614 55.000 12.43 0.00 43.62 4.00
143 144 0.179108 GTACGTAAGAGGGCAGCCTG 60.179 60.000 12.43 0.00 43.62 4.85
144 145 1.328430 GGTACGTAAGAGGGCAGCCT 61.328 60.000 12.43 0.00 43.62 4.58
145 146 1.143401 GGTACGTAAGAGGGCAGCC 59.857 63.158 1.26 1.26 43.62 4.85
146 147 4.829588 GGTACGTAAGAGGGCAGC 57.170 61.111 0.00 0.00 43.62 5.25
175 176 6.234920 TCCAAGAGTTGATCGATACCAAAAA 58.765 36.000 0.00 0.00 0.00 1.94
176 177 5.800296 TCCAAGAGTTGATCGATACCAAAA 58.200 37.500 0.00 0.00 0.00 2.44
177 178 5.414789 TCCAAGAGTTGATCGATACCAAA 57.585 39.130 0.00 0.00 0.00 3.28
178 179 5.614324 ATCCAAGAGTTGATCGATACCAA 57.386 39.130 0.00 0.00 0.00 3.67
179 180 6.724893 TTATCCAAGAGTTGATCGATACCA 57.275 37.500 0.00 0.00 0.00 3.25
180 181 6.424207 GGTTTATCCAAGAGTTGATCGATACC 59.576 42.308 0.00 0.00 35.97 2.73
181 182 7.169982 CAGGTTTATCCAAGAGTTGATCGATAC 59.830 40.741 0.00 0.00 39.02 2.24
182 183 7.069455 TCAGGTTTATCCAAGAGTTGATCGATA 59.931 37.037 0.00 0.00 39.02 2.92
183 184 6.051717 CAGGTTTATCCAAGAGTTGATCGAT 58.948 40.000 0.00 0.00 39.02 3.59
184 185 5.186992 TCAGGTTTATCCAAGAGTTGATCGA 59.813 40.000 0.00 0.00 39.02 3.59
185 186 5.419542 TCAGGTTTATCCAAGAGTTGATCG 58.580 41.667 0.00 0.00 39.02 3.69
186 187 6.644347 TCTCAGGTTTATCCAAGAGTTGATC 58.356 40.000 0.00 0.00 39.76 2.92
187 188 6.627087 TCTCAGGTTTATCCAAGAGTTGAT 57.373 37.500 0.00 0.00 39.76 2.57
188 189 6.627087 ATCTCAGGTTTATCCAAGAGTTGA 57.373 37.500 0.00 0.00 39.76 3.18
189 190 6.656693 ACAATCTCAGGTTTATCCAAGAGTTG 59.343 38.462 0.00 0.00 39.76 3.16
190 191 6.784031 ACAATCTCAGGTTTATCCAAGAGTT 58.216 36.000 0.00 0.00 39.76 3.01
191 192 6.380079 ACAATCTCAGGTTTATCCAAGAGT 57.620 37.500 0.00 0.00 39.76 3.24
192 193 7.391554 TCAAACAATCTCAGGTTTATCCAAGAG 59.608 37.037 0.00 0.00 39.99 2.85
193 194 7.230747 TCAAACAATCTCAGGTTTATCCAAGA 58.769 34.615 0.00 0.00 35.59 3.02
194 195 7.452880 TCAAACAATCTCAGGTTTATCCAAG 57.547 36.000 0.00 0.00 35.59 3.61
195 196 7.831691 TTCAAACAATCTCAGGTTTATCCAA 57.168 32.000 0.00 0.00 35.59 3.53
196 197 7.831691 TTTCAAACAATCTCAGGTTTATCCA 57.168 32.000 0.00 0.00 35.59 3.41
228 229 9.458727 CAGCATATGGAATCCACTATTTAGAAT 57.541 33.333 3.09 0.00 35.80 2.40
229 230 8.439971 ACAGCATATGGAATCCACTATTTAGAA 58.560 33.333 3.09 0.00 35.80 2.10
230 231 7.977818 ACAGCATATGGAATCCACTATTTAGA 58.022 34.615 3.09 0.00 35.80 2.10
231 232 8.627208 AACAGCATATGGAATCCACTATTTAG 57.373 34.615 3.09 0.00 35.80 1.85
232 233 8.995027 AAACAGCATATGGAATCCACTATTTA 57.005 30.769 3.09 0.00 35.80 1.40
233 234 7.781693 AGAAACAGCATATGGAATCCACTATTT 59.218 33.333 3.09 0.00 35.80 1.40
234 235 7.230108 CAGAAACAGCATATGGAATCCACTATT 59.770 37.037 3.09 0.00 35.80 1.73
235 236 6.713903 CAGAAACAGCATATGGAATCCACTAT 59.286 38.462 3.09 1.35 35.80 2.12
236 237 6.057533 CAGAAACAGCATATGGAATCCACTA 58.942 40.000 3.09 0.00 35.80 2.74
237 238 4.885907 CAGAAACAGCATATGGAATCCACT 59.114 41.667 3.09 0.00 35.80 4.00
238 239 4.883585 TCAGAAACAGCATATGGAATCCAC 59.116 41.667 3.09 0.00 35.80 4.02
239 240 5.104402 TCTCAGAAACAGCATATGGAATCCA 60.104 40.000 3.67 3.67 38.19 3.41
240 241 5.371526 TCTCAGAAACAGCATATGGAATCC 58.628 41.667 4.56 0.00 0.00 3.01
241 242 6.485984 ACATCTCAGAAACAGCATATGGAATC 59.514 38.462 4.56 0.00 0.00 2.52
242 243 6.363065 ACATCTCAGAAACAGCATATGGAAT 58.637 36.000 4.56 0.00 0.00 3.01
243 244 5.748402 ACATCTCAGAAACAGCATATGGAA 58.252 37.500 4.56 0.00 0.00 3.53
244 245 5.363562 ACATCTCAGAAACAGCATATGGA 57.636 39.130 4.56 0.00 0.00 3.41
245 246 6.286758 AGTACATCTCAGAAACAGCATATGG 58.713 40.000 4.56 0.00 0.00 2.74
246 247 7.042187 GGAAGTACATCTCAGAAACAGCATATG 60.042 40.741 0.00 0.00 0.00 1.78
247 248 6.989169 GGAAGTACATCTCAGAAACAGCATAT 59.011 38.462 0.00 0.00 0.00 1.78
248 249 6.155221 AGGAAGTACATCTCAGAAACAGCATA 59.845 38.462 0.00 0.00 0.00 3.14
249 250 5.046014 AGGAAGTACATCTCAGAAACAGCAT 60.046 40.000 0.00 0.00 0.00 3.79
250 251 4.284490 AGGAAGTACATCTCAGAAACAGCA 59.716 41.667 0.00 0.00 0.00 4.41
251 252 4.629200 CAGGAAGTACATCTCAGAAACAGC 59.371 45.833 0.00 0.00 0.00 4.40
252 253 5.788450 ACAGGAAGTACATCTCAGAAACAG 58.212 41.667 0.00 0.00 0.00 3.16
253 254 5.808366 ACAGGAAGTACATCTCAGAAACA 57.192 39.130 0.00 0.00 0.00 2.83
254 255 8.779354 ATTTACAGGAAGTACATCTCAGAAAC 57.221 34.615 0.00 0.00 30.91 2.78
255 256 9.871238 GTATTTACAGGAAGTACATCTCAGAAA 57.129 33.333 0.00 0.00 32.04 2.52
256 257 9.031537 TGTATTTACAGGAAGTACATCTCAGAA 57.968 33.333 0.00 0.00 35.85 3.02
257 258 8.589701 TGTATTTACAGGAAGTACATCTCAGA 57.410 34.615 0.00 0.00 35.85 3.27
273 274 3.566322 ACCGCAAAACAGCTGTATTTACA 59.434 39.130 22.01 0.00 29.89 2.41
274 275 4.155310 ACCGCAAAACAGCTGTATTTAC 57.845 40.909 22.01 15.18 29.89 2.01
275 276 5.943706 TTACCGCAAAACAGCTGTATTTA 57.056 34.783 22.01 5.06 34.83 1.40
276 277 4.839668 TTACCGCAAAACAGCTGTATTT 57.160 36.364 22.01 18.43 34.83 1.40
277 278 4.839668 TTTACCGCAAAACAGCTGTATT 57.160 36.364 22.01 13.58 34.83 1.89
278 279 4.380444 CCATTTACCGCAAAACAGCTGTAT 60.380 41.667 22.01 9.71 34.83 2.29
279 280 3.057876 CCATTTACCGCAAAACAGCTGTA 60.058 43.478 22.01 0.00 33.86 2.74
280 281 2.288152 CCATTTACCGCAAAACAGCTGT 60.288 45.455 15.25 15.25 36.01 4.40
281 282 2.327568 CCATTTACCGCAAAACAGCTG 58.672 47.619 13.48 13.48 0.00 4.24
282 283 1.336795 GCCATTTACCGCAAAACAGCT 60.337 47.619 0.00 0.00 0.00 4.24
283 284 1.067693 GCCATTTACCGCAAAACAGC 58.932 50.000 0.00 0.00 0.00 4.40
284 285 1.335935 CGCCATTTACCGCAAAACAG 58.664 50.000 0.00 0.00 0.00 3.16
285 286 3.481009 CGCCATTTACCGCAAAACA 57.519 47.368 0.00 0.00 0.00 2.83
292 293 3.347958 AATGTATTGCGCCATTTACCG 57.652 42.857 4.18 0.00 0.00 4.02
293 294 4.260172 GCAAAATGTATTGCGCCATTTACC 60.260 41.667 18.50 11.14 45.37 2.85
294 295 4.821012 GCAAAATGTATTGCGCCATTTAC 58.179 39.130 18.50 12.25 45.37 2.01
304 305 2.093869 AGCTGGGCTGCAAAATGTATTG 60.094 45.455 0.50 0.00 37.57 1.90
305 306 2.181975 AGCTGGGCTGCAAAATGTATT 58.818 42.857 0.50 0.00 37.57 1.89
306 307 1.856629 AGCTGGGCTGCAAAATGTAT 58.143 45.000 0.50 0.00 37.57 2.29
307 308 3.362040 AGCTGGGCTGCAAAATGTA 57.638 47.368 0.50 0.00 37.57 2.29
308 309 4.203245 AGCTGGGCTGCAAAATGT 57.797 50.000 0.50 0.00 37.57 2.71
317 318 3.084786 GTGAAGTTAAATCAGCTGGGCT 58.915 45.455 15.13 0.50 40.77 5.19
318 319 3.084786 AGTGAAGTTAAATCAGCTGGGC 58.915 45.455 15.13 0.00 0.00 5.36
319 320 4.326826 TCAGTGAAGTTAAATCAGCTGGG 58.673 43.478 15.13 0.00 32.09 4.45
320 321 4.394300 CCTCAGTGAAGTTAAATCAGCTGG 59.606 45.833 15.13 0.00 32.09 4.85
321 322 4.394300 CCCTCAGTGAAGTTAAATCAGCTG 59.606 45.833 7.63 7.63 32.28 4.24
322 323 4.042187 ACCCTCAGTGAAGTTAAATCAGCT 59.958 41.667 0.00 0.00 0.00 4.24
323 324 4.327680 ACCCTCAGTGAAGTTAAATCAGC 58.672 43.478 0.00 0.00 0.00 4.26
336 337 9.990885 ATGAACAAGTCAGTAACACCCTCAGTG 62.991 44.444 0.00 0.00 45.84 3.66
337 338 3.039011 ACAAGTCAGTAACACCCTCAGT 58.961 45.455 0.00 0.00 0.00 3.41
338 339 3.753294 ACAAGTCAGTAACACCCTCAG 57.247 47.619 0.00 0.00 0.00 3.35
339 340 3.452990 TGAACAAGTCAGTAACACCCTCA 59.547 43.478 0.00 0.00 0.00 3.86
340 341 4.067972 TGAACAAGTCAGTAACACCCTC 57.932 45.455 0.00 0.00 0.00 4.30
341 342 4.706842 ATGAACAAGTCAGTAACACCCT 57.293 40.909 0.00 0.00 40.43 4.34
342 343 5.767816 AAATGAACAAGTCAGTAACACCC 57.232 39.130 0.00 0.00 40.43 4.61
343 344 6.472163 CACAAAATGAACAAGTCAGTAACACC 59.528 38.462 0.00 0.00 40.43 4.16
344 345 7.247728 TCACAAAATGAACAAGTCAGTAACAC 58.752 34.615 0.00 0.00 40.43 3.32
345 346 7.335673 TCTCACAAAATGAACAAGTCAGTAACA 59.664 33.333 0.00 0.00 40.43 2.41
346 347 7.693952 TCTCACAAAATGAACAAGTCAGTAAC 58.306 34.615 0.00 0.00 40.43 2.50
347 348 7.857734 TCTCACAAAATGAACAAGTCAGTAA 57.142 32.000 0.00 0.00 40.43 2.24
348 349 7.857734 TTCTCACAAAATGAACAAGTCAGTA 57.142 32.000 0.00 0.00 40.43 2.74
349 350 6.757897 TTCTCACAAAATGAACAAGTCAGT 57.242 33.333 0.00 0.00 40.43 3.41
350 351 6.694411 CCTTTCTCACAAAATGAACAAGTCAG 59.306 38.462 0.00 0.00 40.43 3.51
351 352 6.405731 CCCTTTCTCACAAAATGAACAAGTCA 60.406 38.462 0.00 0.00 41.67 3.41
352 353 5.979517 CCCTTTCTCACAAAATGAACAAGTC 59.020 40.000 0.00 0.00 36.69 3.01
353 354 5.682212 GCCCTTTCTCACAAAATGAACAAGT 60.682 40.000 0.00 0.00 36.69 3.16
354 355 4.746611 GCCCTTTCTCACAAAATGAACAAG 59.253 41.667 0.00 0.00 36.69 3.16
355 356 4.161189 TGCCCTTTCTCACAAAATGAACAA 59.839 37.500 0.00 0.00 36.69 2.83
356 357 3.703556 TGCCCTTTCTCACAAAATGAACA 59.296 39.130 0.00 0.00 36.69 3.18
357 358 4.320608 TGCCCTTTCTCACAAAATGAAC 57.679 40.909 0.00 0.00 36.69 3.18
358 359 5.299148 CATTGCCCTTTCTCACAAAATGAA 58.701 37.500 0.00 0.00 36.69 2.57
359 360 4.800249 GCATTGCCCTTTCTCACAAAATGA 60.800 41.667 0.00 0.00 35.45 2.57
360 361 3.434299 GCATTGCCCTTTCTCACAAAATG 59.566 43.478 0.00 0.00 0.00 2.32
361 362 3.071312 TGCATTGCCCTTTCTCACAAAAT 59.929 39.130 6.12 0.00 0.00 1.82
362 363 2.433604 TGCATTGCCCTTTCTCACAAAA 59.566 40.909 6.12 0.00 0.00 2.44
363 364 2.037901 TGCATTGCCCTTTCTCACAAA 58.962 42.857 6.12 0.00 0.00 2.83
364 365 1.702182 TGCATTGCCCTTTCTCACAA 58.298 45.000 6.12 0.00 0.00 3.33
365 366 1.927487 ATGCATTGCCCTTTCTCACA 58.073 45.000 6.12 0.00 0.00 3.58
366 367 3.056322 AGAAATGCATTGCCCTTTCTCAC 60.056 43.478 21.43 6.40 35.89 3.51
367 368 3.056393 CAGAAATGCATTGCCCTTTCTCA 60.056 43.478 23.09 0.00 37.40 3.27
368 369 3.518590 CAGAAATGCATTGCCCTTTCTC 58.481 45.455 23.09 4.00 37.40 2.87
369 370 2.354403 GCAGAAATGCATTGCCCTTTCT 60.354 45.455 21.43 21.43 38.85 2.52
370 371 2.004733 GCAGAAATGCATTGCCCTTTC 58.995 47.619 13.82 18.75 32.86 2.62
371 372 1.626825 AGCAGAAATGCATTGCCCTTT 59.373 42.857 13.82 6.12 38.58 3.11
372 373 1.206371 GAGCAGAAATGCATTGCCCTT 59.794 47.619 13.82 0.00 38.58 3.95
379 380 8.857098 ACATATTTCTAATGAGCAGAAATGCAT 58.143 29.630 16.67 0.00 46.87 3.96
397 398 6.811253 TTTATCCGGTGGCATACATATTTC 57.189 37.500 0.00 0.00 0.00 2.17
403 404 2.093606 TCGTTTTATCCGGTGGCATACA 60.094 45.455 0.00 0.00 0.00 2.29
405 406 2.431419 TCTCGTTTTATCCGGTGGCATA 59.569 45.455 0.00 0.00 0.00 3.14
450 451 4.633565 GGAAAAGCAACCATGTTGTGAAAA 59.366 37.500 8.58 0.00 0.00 2.29
504 515 2.622942 GTTCCTGAAGTTTCACCATGCA 59.377 45.455 0.00 0.00 32.90 3.96
505 516 2.622942 TGTTCCTGAAGTTTCACCATGC 59.377 45.455 0.00 0.00 32.90 4.06
605 616 0.682209 GGAGACAAGCATGGCCACAT 60.682 55.000 8.16 0.00 33.81 3.21
687 698 2.927477 GTCGTCGCATCATTACAAAGGA 59.073 45.455 0.00 0.00 0.00 3.36
736 769 6.014755 GGATTGGGTAGTTAGGTACTGGATAC 60.015 46.154 0.00 0.00 41.52 2.24
767 800 1.004044 CTCAAGACCAGCCACTTGGAT 59.996 52.381 0.00 0.00 42.27 3.41
777 810 2.486472 AGTGGAATGCTCAAGACCAG 57.514 50.000 0.00 0.00 0.00 4.00
785 818 3.823304 AGAAAAGGACAAGTGGAATGCTC 59.177 43.478 0.00 0.00 0.00 4.26
882 921 5.452078 TCTTCGCAGAAACCAAATTGATT 57.548 34.783 0.00 0.00 45.90 2.57
907 946 3.542704 CGATCTACTCCAAAAGTTCGACG 59.457 47.826 0.00 0.00 37.76 5.12
918 957 8.521176 GGACTTTTTATATAGCGATCTACTCCA 58.479 37.037 0.00 0.00 0.00 3.86
964 1003 4.499357 CCCTTCCTTTCCGACTATCTTACG 60.499 50.000 0.00 0.00 0.00 3.18
1060 1116 9.626045 AAGCAACTTTTAATAAGACTGCATAAC 57.374 29.630 18.67 0.00 34.48 1.89
1065 1130 7.145323 TGGAAAGCAACTTTTAATAAGACTGC 58.855 34.615 13.99 13.99 33.49 4.40
1083 1148 9.763465 CAAAAACAAATCAATCATATGGAAAGC 57.237 29.630 2.13 0.00 0.00 3.51
1103 1170 8.706492 TCAATCATATGGAATTGCTCAAAAAC 57.294 30.769 10.77 0.00 0.00 2.43
1146 1215 2.029918 CAGATCACCGAATATCCTGCGA 60.030 50.000 0.00 0.00 0.00 5.10
1196 1265 1.064463 TGCCTTCATGAGTTCCATCCC 60.064 52.381 0.00 0.00 31.94 3.85
1212 1281 1.410004 TCCGGATCGTCTTTATGCCT 58.590 50.000 0.00 0.00 0.00 4.75
1242 1311 2.253758 GCTGGCTGTGAACTCGCAA 61.254 57.895 0.00 0.00 35.77 4.85
1263 1332 2.967459 TAATGCAGACACAAAGCACG 57.033 45.000 0.00 0.00 41.60 5.34
1299 1368 3.136260 TGAGTATATGATGCACCTTGCCA 59.864 43.478 0.00 0.00 44.23 4.92
1310 1379 6.760298 CGCAGCCAAGAATATGAGTATATGAT 59.240 38.462 0.00 0.00 30.00 2.45
1311 1380 6.101997 CGCAGCCAAGAATATGAGTATATGA 58.898 40.000 0.00 0.00 30.00 2.15
1312 1381 5.871524 ACGCAGCCAAGAATATGAGTATATG 59.128 40.000 0.00 0.00 30.00 1.78
1313 1382 6.042638 ACGCAGCCAAGAATATGAGTATAT 57.957 37.500 0.00 0.00 0.00 0.86
1314 1383 5.468540 ACGCAGCCAAGAATATGAGTATA 57.531 39.130 0.00 0.00 0.00 1.47
1315 1384 4.342862 ACGCAGCCAAGAATATGAGTAT 57.657 40.909 0.00 0.00 0.00 2.12
1316 1385 3.819564 ACGCAGCCAAGAATATGAGTA 57.180 42.857 0.00 0.00 0.00 2.59
1317 1386 2.698855 ACGCAGCCAAGAATATGAGT 57.301 45.000 0.00 0.00 0.00 3.41
1318 1387 3.201290 AGAACGCAGCCAAGAATATGAG 58.799 45.455 0.00 0.00 0.00 2.90
1334 1403 3.138304 TCAACCACCATCAAGAAGAACG 58.862 45.455 0.00 0.00 0.00 3.95
1355 1424 7.400052 ACAGATATTAAACCAAAGGAAATGGCT 59.600 33.333 0.00 0.00 41.89 4.75
1403 1475 4.187694 CTCACCAGCTTTCTTATGTCCTC 58.812 47.826 0.00 0.00 0.00 3.71
1456 1528 2.361737 GGGACTTCTTGCAGCCCC 60.362 66.667 0.00 0.00 32.50 5.80
1480 1552 1.495584 GCAGAACTTGTTCGACGCCA 61.496 55.000 7.71 0.00 0.00 5.69
1492 1564 1.542492 CCATGGCTTCTTGCAGAACT 58.458 50.000 0.00 0.00 45.15 3.01
1557 1629 5.422012 AGGTGAAAACCTTCAAAGTGTTCAT 59.578 36.000 0.00 0.00 43.18 2.57
1558 1630 4.770010 AGGTGAAAACCTTCAAAGTGTTCA 59.230 37.500 0.00 0.00 43.18 3.18
1559 1631 5.324784 AGGTGAAAACCTTCAAAGTGTTC 57.675 39.130 0.00 0.00 43.18 3.18
1581 1653 8.121305 ACAACCATTGCTGTATTTCAGAATAA 57.879 30.769 0.00 0.00 46.27 1.40
1595 1667 4.512571 GCTGAAATTTTGACAACCATTGCT 59.487 37.500 0.00 0.00 0.00 3.91
1608 1680 6.100404 TCTGGCATAACAAGCTGAAATTTT 57.900 33.333 0.00 0.00 0.00 1.82
1633 1705 2.627515 TCTGAATAGACTGCATGGCC 57.372 50.000 0.00 0.00 0.00 5.36
1719 1791 6.006449 AGTGCTCTTTCAACACCAAGAATAT 58.994 36.000 0.00 0.00 34.83 1.28
1764 1836 7.891561 TGACCAAATTCAGGTATTTAAACAGG 58.108 34.615 2.76 0.00 40.09 4.00
1765 1837 8.792633 TCTGACCAAATTCAGGTATTTAAACAG 58.207 33.333 2.76 4.96 42.95 3.16
1787 1859 4.761739 GTGTTCATCCACCTTCATTTCTGA 59.238 41.667 0.00 0.00 0.00 3.27
1805 1877 3.112709 GCCTCCGACTGCGTGTTC 61.113 66.667 0.00 0.00 35.23 3.18
1876 1948 0.031515 ACACCATCCGGATCCCACTA 60.032 55.000 15.88 0.00 35.59 2.74
1936 2008 6.155049 AGACCCAACAATAAGAAATGGATTGG 59.845 38.462 0.00 0.00 35.34 3.16
2004 2091 9.950680 ACATTTGAAAGACAACAGTTACTATTG 57.049 29.630 1.43 1.43 38.29 1.90
2054 2141 6.315393 CGTTCATGGGCTACACTTTAATAAGT 59.685 38.462 0.00 0.00 45.40 2.24
2071 2158 0.321564 TCTCCACCTTGCGTTCATGG 60.322 55.000 0.00 0.00 41.76 3.66
2079 2166 1.349357 AGTTCCTCTTCTCCACCTTGC 59.651 52.381 0.00 0.00 0.00 4.01
2233 2320 1.688735 TGGCGATTCTCCTCGATCATT 59.311 47.619 0.00 0.00 41.12 2.57
2254 2341 3.195825 AGGTCCAGCATACACTTACACTC 59.804 47.826 0.00 0.00 0.00 3.51
2319 2406 6.350949 GGTCTCTGTCTCTTAGCTTCTGAAAT 60.351 42.308 0.00 0.00 0.00 2.17
2361 2448 2.689658 TGGAAGACTTGACCCTTCTCA 58.310 47.619 0.00 0.00 38.92 3.27
2376 2463 2.356125 CCCTTCACAGTACCCATGGAAG 60.356 54.545 15.22 5.93 33.37 3.46
2380 2467 1.065418 GGTCCCTTCACAGTACCCATG 60.065 57.143 0.00 0.00 0.00 3.66
2484 2571 8.868522 TCCTTCAGACAAATTGACATCTTAAT 57.131 30.769 0.00 0.00 0.00 1.40
2530 2617 9.511272 TGAAGAGCATATGCATAAGACATTATT 57.489 29.630 28.62 8.74 45.16 1.40
2531 2618 8.944029 GTGAAGAGCATATGCATAAGACATTAT 58.056 33.333 28.62 3.88 45.16 1.28
2658 2745 2.928757 GTGATCAGAGCTGCTAACACAG 59.071 50.000 0.15 0.00 40.80 3.66
2713 2800 7.345691 ACATAAATCTATGAATCACCACCACA 58.654 34.615 0.00 0.00 37.68 4.17
2873 2960 4.742438 ACAACAACATGAACATACGGTC 57.258 40.909 0.00 0.00 0.00 4.79
2879 2966 5.931146 ACAACAACAACAACAACATGAACAT 59.069 32.000 0.00 0.00 0.00 2.71
2881 2968 5.837586 ACAACAACAACAACAACATGAAC 57.162 34.783 0.00 0.00 0.00 3.18
2895 2982 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2896 2983 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2897 2984 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
2898 2985 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2899 2986 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
2901 2988 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
2902 2989 5.193936 CACAACAACAACAACAACAACAAC 58.806 37.500 0.00 0.00 0.00 3.32
2903 2990 4.870426 ACACAACAACAACAACAACAACAA 59.130 33.333 0.00 0.00 0.00 2.83
2904 2991 4.433615 ACACAACAACAACAACAACAACA 58.566 34.783 0.00 0.00 0.00 3.33
2905 2992 5.107798 GGTACACAACAACAACAACAACAAC 60.108 40.000 0.00 0.00 0.00 3.32
2906 2993 4.982916 GGTACACAACAACAACAACAACAA 59.017 37.500 0.00 0.00 0.00 2.83
2907 2994 4.547532 GGTACACAACAACAACAACAACA 58.452 39.130 0.00 0.00 0.00 3.33
2908 2995 3.921630 GGGTACACAACAACAACAACAAC 59.078 43.478 0.00 0.00 0.00 3.32
2909 2996 3.827302 AGGGTACACAACAACAACAACAA 59.173 39.130 0.00 0.00 0.00 2.83
2910 2997 3.422796 AGGGTACACAACAACAACAACA 58.577 40.909 0.00 0.00 0.00 3.33
2911 2998 3.692593 AGAGGGTACACAACAACAACAAC 59.307 43.478 0.00 0.00 0.00 3.32
2912 2999 3.958018 AGAGGGTACACAACAACAACAA 58.042 40.909 0.00 0.00 0.00 2.83
2913 3000 3.637911 AGAGGGTACACAACAACAACA 57.362 42.857 0.00 0.00 0.00 3.33
2914 3001 3.942748 TCAAGAGGGTACACAACAACAAC 59.057 43.478 0.00 0.00 0.00 3.32
2915 3002 4.223556 TCAAGAGGGTACACAACAACAA 57.776 40.909 0.00 0.00 0.00 2.83
2916 3003 3.916359 TCAAGAGGGTACACAACAACA 57.084 42.857 0.00 0.00 0.00 3.33
2917 3004 5.767816 AAATCAAGAGGGTACACAACAAC 57.232 39.130 0.00 0.00 0.00 3.32
2918 3005 9.747898 ATATAAAATCAAGAGGGTACACAACAA 57.252 29.630 0.00 0.00 0.00 2.83
2919 3006 9.173021 CATATAAAATCAAGAGGGTACACAACA 57.827 33.333 0.00 0.00 0.00 3.33
2920 3007 8.621286 CCATATAAAATCAAGAGGGTACACAAC 58.379 37.037 0.00 0.00 0.00 3.32
2921 3008 8.333235 ACCATATAAAATCAAGAGGGTACACAA 58.667 33.333 0.00 0.00 0.00 3.33
2922 3009 7.773224 CACCATATAAAATCAAGAGGGTACACA 59.227 37.037 0.00 0.00 0.00 3.72
2923 3010 7.990886 TCACCATATAAAATCAAGAGGGTACAC 59.009 37.037 0.00 0.00 0.00 2.90
2924 3011 7.990886 GTCACCATATAAAATCAAGAGGGTACA 59.009 37.037 0.00 0.00 0.00 2.90
2925 3012 7.170998 CGTCACCATATAAAATCAAGAGGGTAC 59.829 40.741 0.00 0.00 0.00 3.34
2926 3013 7.147620 ACGTCACCATATAAAATCAAGAGGGTA 60.148 37.037 0.00 0.00 0.00 3.69
2927 3014 6.055588 CGTCACCATATAAAATCAAGAGGGT 58.944 40.000 0.00 0.00 0.00 4.34
2928 3015 6.017934 CACGTCACCATATAAAATCAAGAGGG 60.018 42.308 0.00 0.00 0.00 4.30
2933 3020 7.873719 AATCCACGTCACCATATAAAATCAA 57.126 32.000 0.00 0.00 0.00 2.57
2938 3025 6.594547 TCGAAAAATCCACGTCACCATATAAA 59.405 34.615 0.00 0.00 0.00 1.40
2952 3039 3.571828 TGCTGACCAATTCGAAAAATCCA 59.428 39.130 0.00 0.00 0.00 3.41
2965 3052 1.133945 TGTTTGTAGCCTGCTGACCAA 60.134 47.619 0.97 0.00 0.00 3.67
2966 3053 0.472044 TGTTTGTAGCCTGCTGACCA 59.528 50.000 0.97 0.00 0.00 4.02
2971 3058 2.158608 AGGAAGTTGTTTGTAGCCTGCT 60.159 45.455 0.00 0.00 0.00 4.24
2991 3082 9.653287 TGTTTCCTTACTATAAGAACACATCAG 57.347 33.333 0.00 0.00 0.00 2.90
3062 3153 6.039605 TCAATGCCATATTTGACATGGTACTG 59.960 38.462 0.00 0.00 44.15 2.74
3074 3165 5.048224 GCTCTGCTATGTCAATGCCATATTT 60.048 40.000 0.00 0.00 0.00 1.40
3110 3201 2.610976 CCCCATGAAACAATGTGCTGTG 60.611 50.000 0.00 0.00 0.00 3.66
3119 3210 4.962995 TGAACCTTAAACCCCATGAAACAA 59.037 37.500 0.00 0.00 0.00 2.83
3120 3211 4.547671 TGAACCTTAAACCCCATGAAACA 58.452 39.130 0.00 0.00 0.00 2.83
3121 3212 5.538849 TTGAACCTTAAACCCCATGAAAC 57.461 39.130 0.00 0.00 0.00 2.78
3123 3214 5.212745 AGTTTGAACCTTAAACCCCATGAA 58.787 37.500 0.00 0.00 38.47 2.57
3125 3216 5.545063 AAGTTTGAACCTTAAACCCCATG 57.455 39.130 0.00 0.00 38.47 3.66
3145 3422 7.388638 TTCCTAATATTGAGGTCCCCTAAAG 57.611 40.000 0.00 0.00 35.40 1.85
3147 3424 7.964730 AATTCCTAATATTGAGGTCCCCTAA 57.035 36.000 0.00 0.00 35.40 2.69
3148 3425 7.964730 AAATTCCTAATATTGAGGTCCCCTA 57.035 36.000 0.00 0.00 35.40 3.53
3174 3451 7.704472 TCAAAACGCATACTGTTCTTGAAAATT 59.296 29.630 0.00 0.00 0.00 1.82
3190 3467 5.550290 AGAATTTGGGAAATCAAAACGCAT 58.450 33.333 0.00 0.00 39.64 4.73
3191 3468 4.954875 AGAATTTGGGAAATCAAAACGCA 58.045 34.783 0.00 0.00 39.64 5.24
3192 3469 6.128661 GGTTAGAATTTGGGAAATCAAAACGC 60.129 38.462 0.00 0.00 39.64 4.84
3193 3470 6.926272 TGGTTAGAATTTGGGAAATCAAAACG 59.074 34.615 0.00 0.00 39.64 3.60
3198 3477 6.318913 TCCTTGGTTAGAATTTGGGAAATCA 58.681 36.000 0.00 0.00 0.00 2.57
3205 3484 5.782893 TGTGTTCCTTGGTTAGAATTTGG 57.217 39.130 0.00 0.00 0.00 3.28
3209 3488 7.839680 AAGAATTGTGTTCCTTGGTTAGAAT 57.160 32.000 0.00 0.00 0.00 2.40
3253 3536 9.950496 ATCTGTACTGAAAATCTGTAGTGAAAT 57.050 29.630 6.54 0.00 32.64 2.17
3272 3555 8.755696 TGTTTATTCCAAATGCAAATCTGTAC 57.244 30.769 0.00 0.00 0.00 2.90
3302 3585 8.701908 TGGTACACCCTTATATACTAGACAAG 57.298 38.462 0.00 0.00 34.29 3.16
3303 3586 9.491406 TTTGGTACACCCTTATATACTAGACAA 57.509 33.333 0.00 0.00 39.29 3.18
3304 3587 9.491406 TTTTGGTACACCCTTATATACTAGACA 57.509 33.333 0.00 0.00 39.29 3.41
3305 3588 9.755804 GTTTTGGTACACCCTTATATACTAGAC 57.244 37.037 0.00 0.00 39.29 2.59
3306 3589 9.491406 TGTTTTGGTACACCCTTATATACTAGA 57.509 33.333 0.00 0.00 39.29 2.43
3309 3592 9.810870 TTTTGTTTTGGTACACCCTTATATACT 57.189 29.630 0.00 0.00 39.29 2.12
3310 3593 9.844790 GTTTTGTTTTGGTACACCCTTATATAC 57.155 33.333 0.00 0.00 39.29 1.47
3311 3594 9.584008 TGTTTTGTTTTGGTACACCCTTATATA 57.416 29.630 0.00 0.00 39.29 0.86
3312 3595 8.480133 TGTTTTGTTTTGGTACACCCTTATAT 57.520 30.769 0.00 0.00 39.29 0.86
3313 3596 7.893124 TGTTTTGTTTTGGTACACCCTTATA 57.107 32.000 0.00 0.00 39.29 0.98
3314 3597 6.793505 TGTTTTGTTTTGGTACACCCTTAT 57.206 33.333 0.00 0.00 39.29 1.73
3336 3619 9.865321 ATGAAATTTGTGAGATAGGTGAAATTG 57.135 29.630 0.00 0.00 0.00 2.32
3384 3667 0.108041 AACCGTCAGTGTGAACCGTT 60.108 50.000 0.00 0.00 0.00 4.44
3389 3672 2.684001 ACTCAAACCGTCAGTGTGAA 57.316 45.000 0.00 0.00 42.36 3.18
3390 3673 2.427812 TGTACTCAAACCGTCAGTGTGA 59.572 45.455 0.00 0.00 40.63 3.58
3391 3674 2.794910 CTGTACTCAAACCGTCAGTGTG 59.205 50.000 0.00 0.00 34.67 3.82
3432 3715 7.455641 TGGTTTTCTGAGTTTTGTTAACTGA 57.544 32.000 7.22 0.00 0.00 3.41
3528 3812 9.141400 CTCTTTGTTCTGTACCATCTTTACTAC 57.859 37.037 0.00 0.00 0.00 2.73
3564 3849 5.350504 TTTTGTCCATGAAATTGGTGTGT 57.649 34.783 0.00 0.00 38.01 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.