Multiple sequence alignment - TraesCS4A01G244300
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS4A01G244300
chr4A
100.000
3590
0
0
1
3590
554852298
554855887
0.000000e+00
6630.0
1
TraesCS4A01G244300
chr4B
89.331
2615
197
40
1
2567
64776188
64773608
0.000000e+00
3208.0
2
TraesCS4A01G244300
chr4B
86.236
959
89
19
1
923
64785297
64784346
0.000000e+00
1000.0
3
TraesCS4A01G244300
chr4D
90.050
1588
107
24
1
1546
44757704
44756126
0.000000e+00
2010.0
4
TraesCS4A01G244300
chr4D
92.448
1205
65
12
1571
2767
44756046
44754860
0.000000e+00
1698.0
5
TraesCS4A01G244300
chr4D
90.561
784
55
12
2812
3588
44754848
44754077
0.000000e+00
1020.0
6
TraesCS4A01G244300
chr7A
81.304
460
67
10
1093
1545
671305706
671306153
4.410000e-94
355.0
7
TraesCS4A01G244300
chr7D
78.088
502
77
19
1056
1545
579570441
579570921
1.630000e-73
287.0
8
TraesCS4A01G244300
chr2B
77.720
386
72
11
1093
1474
151102925
151103300
1.300000e-54
224.0
9
TraesCS4A01G244300
chr2D
74.807
389
85
10
1093
1477
99660764
99660385
2.870000e-36
163.0
10
TraesCS4A01G244300
chr3A
84.932
146
22
0
1076
1221
728225085
728225230
8.030000e-32
148.0
11
TraesCS4A01G244300
chr3A
83.448
145
24
0
1077
1221
728094997
728095141
6.250000e-28
135.0
12
TraesCS4A01G244300
chr3A
71.429
420
112
8
1943
2358
728100406
728100821
1.760000e-18
104.0
13
TraesCS4A01G244300
chr3B
83.803
142
23
0
1080
1221
805093963
805094104
6.250000e-28
135.0
14
TraesCS4A01G244300
chr3B
72.554
419
109
6
1943
2358
805099381
805099796
8.090000e-27
132.0
15
TraesCS4A01G244300
chr3B
70.784
421
113
7
1943
2358
805127927
805128342
1.780000e-13
87.9
16
TraesCS4A01G244300
chr3D
71.599
419
113
6
1943
2358
598080227
598080642
3.790000e-20
110.0
17
TraesCS4A01G244300
chrUn
70.784
421
113
7
1943
2358
291744735
291744320
1.780000e-13
87.9
18
TraesCS4A01G244300
chr6B
85.075
67
8
2
1446
1511
56011497
56011432
2.310000e-07
67.6
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS4A01G244300
chr4A
554852298
554855887
3589
False
6630
6630
100.000000
1
3590
1
chr4A.!!$F1
3589
1
TraesCS4A01G244300
chr4B
64773608
64776188
2580
True
3208
3208
89.331000
1
2567
1
chr4B.!!$R1
2566
2
TraesCS4A01G244300
chr4B
64784346
64785297
951
True
1000
1000
86.236000
1
923
1
chr4B.!!$R2
922
3
TraesCS4A01G244300
chr4D
44754077
44757704
3627
True
1576
2010
91.019667
1
3588
3
chr4D.!!$R1
3587
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
765
804
0.109458
TTGGATCGTCGACTTCCGTG
60.109
55.0
22.11
5.03
39.75
4.94
F
1710
1818
0.527817
GCGTGTCAGGGACCTATTCG
60.528
60.0
0.00
0.00
0.00
3.34
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1845
1953
0.038526
ACGAAGGCCACGTCTACTTG
60.039
55.0
19.44
0.0
39.87
3.16
R
3349
3471
0.033504
TGAAGCTGTCTCCAACGACC
59.966
55.0
0.00
0.0
32.97
4.79
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
44
45
0.973632
AGCACCAATGGAGACGTACA
59.026
50.000
6.16
0.00
0.00
2.90
87
95
0.179097
GTCTCCTCTCATTGTCCGGC
60.179
60.000
0.00
0.00
0.00
6.13
88
96
0.324738
TCTCCTCTCATTGTCCGGCT
60.325
55.000
0.00
0.00
0.00
5.52
109
117
2.159043
TCTGGATTGAGACGAAGATGGC
60.159
50.000
0.00
0.00
0.00
4.40
224
233
1.705997
AAGCCCCAAGTCCAAGTCGT
61.706
55.000
0.00
0.00
0.00
4.34
225
234
1.966451
GCCCCAAGTCCAAGTCGTG
60.966
63.158
0.00
0.00
0.00
4.35
230
239
1.301716
AAGTCCAAGTCGTGCGCAT
60.302
52.632
15.91
0.00
0.00
4.73
232
241
0.458543
AGTCCAAGTCGTGCGCATAG
60.459
55.000
15.91
11.86
0.00
2.23
303
312
6.168270
TGATTTTAGAAGGTTGGTTTTGGG
57.832
37.500
0.00
0.00
0.00
4.12
331
340
3.314693
AGTTAGAACAAGGAGGGTGTGA
58.685
45.455
0.00
0.00
0.00
3.58
382
391
0.394192
TCAGTGACCTGGCACAAGAG
59.606
55.000
18.81
9.07
41.19
2.85
388
397
0.764369
ACCTGGCACAAGAGAGACCA
60.764
55.000
0.00
0.00
38.70
4.02
391
400
0.836606
TGGCACAAGAGAGACCACAA
59.163
50.000
0.00
0.00
31.92
3.33
499
508
4.069232
CTCCTCCACGAGCGGCAA
62.069
66.667
1.45
0.00
0.00
4.52
518
540
4.096003
CGGATGCCGGACAGGGTT
62.096
66.667
5.05
0.00
44.15
4.11
519
541
2.727392
CGGATGCCGGACAGGGTTA
61.727
63.158
5.05
0.00
44.15
2.85
531
553
4.355151
GGGTTACCCATGCCCTTG
57.645
61.111
16.81
0.00
44.65
3.61
563
585
2.094494
AGCACTACTCCAACGATGACAG
60.094
50.000
0.00
0.00
0.00
3.51
576
599
2.559440
GATGACAGCAGGATGAAGACC
58.441
52.381
0.00
0.00
39.69
3.85
686
723
9.912634
ATGTCCAAACATAAGTTTATTCTGTTG
57.087
29.630
0.00
0.00
45.80
3.33
687
724
8.908903
TGTCCAAACATAAGTTTATTCTGTTGT
58.091
29.630
0.00
0.00
45.80
3.32
690
727
9.528018
CCAAACATAAGTTTATTCTGTTGTGTT
57.472
29.630
0.00
0.00
45.80
3.32
754
793
1.204786
TGGGGACATGGTTGGATCGT
61.205
55.000
0.00
0.00
33.40
3.73
757
796
0.174845
GGACATGGTTGGATCGTCGA
59.825
55.000
0.00
0.00
0.00
4.20
765
804
0.109458
TTGGATCGTCGACTTCCGTG
60.109
55.000
22.11
5.03
39.75
4.94
766
805
1.239296
TGGATCGTCGACTTCCGTGT
61.239
55.000
22.11
2.82
39.75
4.49
773
812
2.349580
CGTCGACTTCCGTGTATCACTA
59.650
50.000
14.70
0.00
39.75
2.74
779
818
0.589708
TCCGTGTATCACTATCCGCG
59.410
55.000
0.00
0.00
31.34
6.46
789
828
0.606604
ACTATCCGCGGACAAGTGTT
59.393
50.000
32.97
19.60
0.00
3.32
790
829
1.001633
ACTATCCGCGGACAAGTGTTT
59.998
47.619
32.97
18.94
0.00
2.83
829
870
2.167693
TCCCCTTTGTATCACTGTAGCG
59.832
50.000
0.00
0.00
0.00
4.26
835
876
1.890489
TGTATCACTGTAGCGTGGTGT
59.110
47.619
0.00
0.00
35.63
4.16
844
889
2.709125
TAGCGTGGTGTGGTGCACTC
62.709
60.000
17.98
10.93
46.86
3.51
871
918
2.033049
CCTTACGGTAGTGATCACTCCG
59.967
54.545
37.52
37.52
47.00
4.63
878
925
1.153549
GTGATCACTCCGCAGTCCC
60.154
63.158
18.83
0.00
0.00
4.46
980
1027
2.767960
ACCCATGGAGATTTTGGCAATC
59.232
45.455
15.22
0.00
0.00
2.67
996
1043
2.692041
GCAATCCCAGCTTGCTAAGATT
59.308
45.455
11.24
11.24
44.36
2.40
997
1044
3.490419
GCAATCCCAGCTTGCTAAGATTG
60.490
47.826
25.90
25.90
44.36
2.67
998
1045
3.939740
ATCCCAGCTTGCTAAGATTGA
57.060
42.857
0.00
0.00
0.00
2.57
999
1046
2.991250
TCCCAGCTTGCTAAGATTGAC
58.009
47.619
0.00
0.00
0.00
3.18
1024
1071
0.674581
CAAACAGCCCGAGCATCAGA
60.675
55.000
0.00
0.00
43.56
3.27
1053
1100
1.377202
GCGTCCAAGAAGCATCCCA
60.377
57.895
0.00
0.00
37.05
4.37
1099
1152
2.589157
CCGGGTGCTAGTGTTCCCA
61.589
63.158
0.00
0.00
39.87
4.37
1408
1461
0.604073
TGTTCATCGACGCCAACCTA
59.396
50.000
0.00
0.00
0.00
3.08
1417
1470
2.508663
GCCAACCTACTCGCCGTC
60.509
66.667
0.00
0.00
0.00
4.79
1420
1473
1.515954
CAACCTACTCGCCGTCCAT
59.484
57.895
0.00
0.00
0.00
3.41
1689
1797
4.314440
TGAAAGAGCTGCCGCCGT
62.314
61.111
0.00
0.00
36.60
5.68
1710
1818
0.527817
GCGTGTCAGGGACCTATTCG
60.528
60.000
0.00
0.00
0.00
3.34
1711
1819
0.815734
CGTGTCAGGGACCTATTCGT
59.184
55.000
0.00
0.00
0.00
3.85
1829
1937
2.829003
CTGGAGACCGCCGAGCTA
60.829
66.667
0.00
0.00
0.00
3.32
1845
1953
1.286260
CTAGACAGGATACGCCGCC
59.714
63.158
0.00
0.00
43.43
6.13
1848
1956
1.883084
GACAGGATACGCCGCCAAG
60.883
63.158
0.00
0.00
43.43
3.61
1850
1958
1.324740
ACAGGATACGCCGCCAAGTA
61.325
55.000
0.00
0.00
43.43
2.24
2069
2177
2.955660
CAACAGTGGCCAACCTTTTCTA
59.044
45.455
7.24
0.00
36.63
2.10
2147
2255
3.771160
GATCGTGCGGTGGAGGGT
61.771
66.667
0.00
0.00
0.00
4.34
2210
2318
4.162592
CACTTTGCAGTGGCTGGA
57.837
55.556
0.00
0.00
46.10
3.86
2237
2345
1.227823
CCACAACGGCTGGAACTCA
60.228
57.895
0.00
0.00
0.00
3.41
2428
2536
0.833949
GAAGGAGAAGTGGCTAGGGG
59.166
60.000
0.00
0.00
0.00
4.79
2473
2581
1.975680
AGTAGGGTCGAGCTTGGAAAA
59.024
47.619
15.18
0.00
0.00
2.29
2498
2606
5.371769
TGGTGGGTCTTCTCTACTAGCTATA
59.628
44.000
0.00
0.00
0.00
1.31
2504
2612
9.609346
GGGTCTTCTCTACTAGCTATAGATAAG
57.391
40.741
19.14
19.14
35.62
1.73
2533
2641
8.988064
ATCGAGCATATATCGTCTTTGTAATT
57.012
30.769
8.78
0.00
40.95
1.40
2547
2655
8.678510
CGTCTTTGTAATTATTTGTGTTGTGTC
58.321
33.333
0.00
0.00
0.00
3.67
2549
2657
8.399425
TCTTTGTAATTATTTGTGTTGTGTCGT
58.601
29.630
0.00
0.00
0.00
4.34
2551
2659
9.999009
TTTGTAATTATTTGTGTTGTGTCGTTA
57.001
25.926
0.00
0.00
0.00
3.18
2596
2704
7.686434
ACTTGTAACTGGATAAGTGGTGTTAT
58.314
34.615
0.00
0.00
39.81
1.89
2609
2717
5.260424
AGTGGTGTTATTGGCATTGATGTA
58.740
37.500
0.00
0.00
0.00
2.29
2610
2718
5.893255
AGTGGTGTTATTGGCATTGATGTAT
59.107
36.000
0.00
0.00
0.00
2.29
2613
2721
6.550481
TGGTGTTATTGGCATTGATGTATCAT
59.450
34.615
0.00
0.00
36.56
2.45
2614
2722
7.723172
TGGTGTTATTGGCATTGATGTATCATA
59.277
33.333
0.00
0.00
36.56
2.15
2615
2723
8.575589
GGTGTTATTGGCATTGATGTATCATAA
58.424
33.333
0.00
0.00
36.56
1.90
2681
2790
9.052080
GCATGAAAACGTAAATCTAAGACTTTC
57.948
33.333
0.00
0.00
0.00
2.62
2707
2817
9.299963
CTTTTGTGTGTGAATTGAACTTTCATA
57.700
29.630
0.00
0.00
37.00
2.15
2750
2866
2.139118
GACTTGACTTCTGCAGGTGTC
58.861
52.381
23.64
23.64
0.00
3.67
2767
2883
0.928229
GTCATACGAATCCACACCGC
59.072
55.000
0.00
0.00
0.00
5.68
2768
2884
0.533032
TCATACGAATCCACACCGCA
59.467
50.000
0.00
0.00
0.00
5.69
2770
2886
1.939934
CATACGAATCCACACCGCATT
59.060
47.619
0.00
0.00
0.00
3.56
2771
2887
2.102070
TACGAATCCACACCGCATTT
57.898
45.000
0.00
0.00
0.00
2.32
2772
2888
1.243902
ACGAATCCACACCGCATTTT
58.756
45.000
0.00
0.00
0.00
1.82
2773
2889
1.611491
ACGAATCCACACCGCATTTTT
59.389
42.857
0.00
0.00
0.00
1.94
2787
2903
3.766432
TTTTTGGTAGGTGCGGCC
58.234
55.556
0.00
0.00
37.58
6.13
2788
2904
1.904378
TTTTTGGTAGGTGCGGCCC
60.904
57.895
0.00
0.00
38.26
5.80
2789
2905
2.642183
TTTTTGGTAGGTGCGGCCCA
62.642
55.000
0.00
0.93
38.26
5.36
2790
2906
2.433646
TTTTGGTAGGTGCGGCCCAT
62.434
55.000
0.00
0.00
38.26
4.00
2791
2907
2.830186
TTTGGTAGGTGCGGCCCATC
62.830
60.000
0.00
0.00
38.26
3.51
2792
2908
3.480133
GGTAGGTGCGGCCCATCT
61.480
66.667
11.21
11.21
38.74
2.90
2793
2909
2.203070
GTAGGTGCGGCCCATCTG
60.203
66.667
15.11
0.00
35.16
2.90
2794
2910
2.364973
TAGGTGCGGCCCATCTGA
60.365
61.111
15.11
0.30
35.16
3.27
2795
2911
2.434843
TAGGTGCGGCCCATCTGAG
61.435
63.158
15.11
0.00
35.16
3.35
2797
2913
4.479993
GTGCGGCCCATCTGAGCT
62.480
66.667
0.00
0.00
0.00
4.09
2798
2914
2.763710
TGCGGCCCATCTGAGCTA
60.764
61.111
0.00
0.00
0.00
3.32
2799
2915
2.030262
GCGGCCCATCTGAGCTAG
59.970
66.667
0.00
0.00
0.00
3.42
2800
2916
2.030262
CGGCCCATCTGAGCTAGC
59.970
66.667
6.62
6.62
0.00
3.42
2801
2917
2.429494
GGCCCATCTGAGCTAGCC
59.571
66.667
12.13
3.49
0.00
3.93
2802
2918
2.146061
GGCCCATCTGAGCTAGCCT
61.146
63.158
12.13
0.00
37.42
4.58
2803
2919
0.833834
GGCCCATCTGAGCTAGCCTA
60.834
60.000
12.13
0.00
37.42
3.93
2804
2920
1.274712
GCCCATCTGAGCTAGCCTAT
58.725
55.000
12.13
0.00
0.00
2.57
2805
2921
2.461695
GCCCATCTGAGCTAGCCTATA
58.538
52.381
12.13
0.00
0.00
1.31
2806
2922
2.167487
GCCCATCTGAGCTAGCCTATAC
59.833
54.545
12.13
0.00
0.00
1.47
2807
2923
3.707316
CCCATCTGAGCTAGCCTATACT
58.293
50.000
12.13
0.00
0.00
2.12
2808
2924
4.093011
CCCATCTGAGCTAGCCTATACTT
58.907
47.826
12.13
0.00
0.00
2.24
2809
2925
5.265191
CCCATCTGAGCTAGCCTATACTTA
58.735
45.833
12.13
0.00
0.00
2.24
2810
2926
5.126384
CCCATCTGAGCTAGCCTATACTTAC
59.874
48.000
12.13
0.00
0.00
2.34
2835
2951
3.412386
GTTTTGCTCCCTACTCACATGT
58.588
45.455
0.00
0.00
0.00
3.21
2842
2958
5.478332
TGCTCCCTACTCACATGTGATATAG
59.522
44.000
28.00
26.92
39.13
1.31
2859
2975
6.720288
GTGATATAGCAAACTCCCTACCTAGA
59.280
42.308
0.00
0.00
0.00
2.43
2877
2993
6.932947
ACCTAGACATAGTAAAAGCTTCGTT
58.067
36.000
0.00
0.00
0.00
3.85
2881
2997
7.907214
AGACATAGTAAAAGCTTCGTTTCAT
57.093
32.000
0.00
0.00
0.00
2.57
2889
3005
3.904136
AGCTTCGTTTCATCAACAAGG
57.096
42.857
0.00
0.00
34.68
3.61
2890
3006
2.554032
AGCTTCGTTTCATCAACAAGGG
59.446
45.455
0.00
0.00
34.68
3.95
2924
3041
1.871006
TCTATTGGGGGCTAGGTAGGT
59.129
52.381
0.00
0.00
0.00
3.08
2935
3052
4.021016
GGGCTAGGTAGGTTATCATGTCAG
60.021
50.000
0.00
0.00
0.00
3.51
2942
3059
5.163754
GGTAGGTTATCATGTCAGCAACAAC
60.164
44.000
0.00
0.00
42.37
3.32
2952
3069
2.156504
GTCAGCAACAACGATGAGTCTG
59.843
50.000
0.00
3.43
0.00
3.51
2956
3073
3.248602
AGCAACAACGATGAGTCTGTTTC
59.751
43.478
0.00
0.00
34.36
2.78
2982
3099
2.325484
TGAAGGTGTCTAAGCTCCACA
58.675
47.619
0.00
0.00
34.84
4.17
3047
3164
1.558294
TCCAGAGCACTCGAGTAGGTA
59.442
52.381
19.57
1.01
34.09
3.08
3052
3169
4.757657
CAGAGCACTCGAGTAGGTATACAT
59.242
45.833
19.57
0.00
32.62
2.29
3063
3180
6.916387
CGAGTAGGTATACATGAAACGACATT
59.084
38.462
5.01
0.00
34.07
2.71
3070
3187
8.875803
GGTATACATGAAACGACATTAAGTGAA
58.124
33.333
5.01
0.00
0.00
3.18
3071
3188
9.901724
GTATACATGAAACGACATTAAGTGAAG
57.098
33.333
0.00
0.00
0.00
3.02
3072
3189
8.771920
ATACATGAAACGACATTAAGTGAAGA
57.228
30.769
0.00
0.00
0.00
2.87
3073
3190
7.672983
ACATGAAACGACATTAAGTGAAGAT
57.327
32.000
0.00
0.00
0.00
2.40
3074
3191
7.743104
ACATGAAACGACATTAAGTGAAGATC
58.257
34.615
0.00
0.00
0.00
2.75
3075
3192
6.389622
TGAAACGACATTAAGTGAAGATCG
57.610
37.500
0.00
0.00
35.48
3.69
3076
3193
5.924254
TGAAACGACATTAAGTGAAGATCGT
59.076
36.000
0.00
0.00
41.11
3.73
3077
3194
6.089016
TGAAACGACATTAAGTGAAGATCGTC
59.911
38.462
1.20
1.20
39.43
4.20
3078
3195
5.312120
ACGACATTAAGTGAAGATCGTCT
57.688
39.130
10.08
0.00
37.10
4.18
3079
3196
5.333513
ACGACATTAAGTGAAGATCGTCTC
58.666
41.667
10.08
6.42
37.10
3.36
3080
3197
5.124138
ACGACATTAAGTGAAGATCGTCTCT
59.876
40.000
10.08
8.64
37.10
3.10
3081
3198
5.679355
CGACATTAAGTGAAGATCGTCTCTC
59.321
44.000
12.58
3.19
31.03
3.20
3082
3199
5.897050
ACATTAAGTGAAGATCGTCTCTCC
58.103
41.667
12.58
0.00
31.03
3.71
3083
3200
5.654650
ACATTAAGTGAAGATCGTCTCTCCT
59.345
40.000
12.58
2.78
31.03
3.69
3100
3217
6.371825
GTCTCTCCTTTGTTACGGAAAATCAT
59.628
38.462
0.00
0.00
0.00
2.45
3138
3257
4.264253
CCATCTTCTTTGAGGTATGCACA
58.736
43.478
0.00
0.00
0.00
4.57
3142
3261
4.631377
TCTTCTTTGAGGTATGCACAATCG
59.369
41.667
0.00
0.00
0.00
3.34
3143
3262
3.270027
TCTTTGAGGTATGCACAATCGG
58.730
45.455
0.00
0.00
0.00
4.18
3144
3263
1.378531
TTGAGGTATGCACAATCGGC
58.621
50.000
0.00
0.00
0.00
5.54
3146
3265
1.339535
TGAGGTATGCACAATCGGCAA
60.340
47.619
0.00
0.00
45.60
4.52
3165
3284
4.278419
GGCAATGAGTTTAGTCCAACTTGT
59.722
41.667
0.00
0.00
37.11
3.16
3175
3294
2.283173
CAACTTGTGGGAGGGGGC
60.283
66.667
0.00
0.00
0.00
5.80
3191
3310
1.614413
GGGGCTTAGTCCATCTACGAG
59.386
57.143
4.86
0.00
0.00
4.18
3201
3320
0.248661
CATCTACGAGGGTGTGAGCG
60.249
60.000
0.00
0.00
0.00
5.03
3209
3328
2.639286
GGTGTGAGCGGCAGTTTG
59.361
61.111
1.45
0.00
0.00
2.93
3210
3329
2.050985
GTGTGAGCGGCAGTTTGC
60.051
61.111
1.45
0.00
44.08
3.68
3224
3343
2.602322
TTTGCGCGGCATTTTTGGC
61.602
52.632
8.83
0.00
38.76
4.52
3247
3366
5.410924
CCTTTCTCGTCTACAACATGATCA
58.589
41.667
0.00
0.00
0.00
2.92
3282
3401
0.544697
TTCCCTTTAGGTGGATCGGC
59.455
55.000
0.00
0.00
36.75
5.54
3304
3423
1.605165
GGGGTGTTGGCGGATTTCA
60.605
57.895
0.00
0.00
0.00
2.69
3315
3434
1.069227
GCGGATTTCAAGAAGCGTGTT
60.069
47.619
0.00
0.00
0.00
3.32
3325
3447
2.611518
AGAAGCGTGTTGATGTAGCTC
58.388
47.619
0.00
0.00
37.15
4.09
3329
3451
1.724623
GCGTGTTGATGTAGCTCGAAA
59.275
47.619
0.00
0.00
0.00
3.46
3334
3456
5.612865
GTGTTGATGTAGCTCGAAAGAAAG
58.387
41.667
0.00
0.00
41.32
2.62
3349
3471
6.638063
TCGAAAGAAAGCATCAAGACAATTTG
59.362
34.615
0.00
0.00
37.03
2.32
3360
3482
3.485463
AGACAATTTGGTCGTTGGAGA
57.515
42.857
0.78
0.00
42.62
3.71
3361
3483
3.139077
AGACAATTTGGTCGTTGGAGAC
58.861
45.455
0.78
0.00
42.62
3.36
3386
3508
0.725784
CAGGTGCGTGATTTCGTTGC
60.726
55.000
0.00
0.00
0.00
4.17
3394
3516
1.134694
GATTTCGTTGCGGACCTGC
59.865
57.895
1.90
1.90
0.00
4.85
3401
3523
0.748005
GTTGCGGACCTGCCATGTAT
60.748
55.000
5.97
0.00
35.94
2.29
3435
3557
1.876714
GCATCGAAAGGCGCTCGTA
60.877
57.895
15.83
5.12
40.61
3.43
3458
3581
0.036010
AGTGCCCGTTTGAGGAGATG
60.036
55.000
0.00
0.00
0.00
2.90
3468
3591
4.440250
CGTTTGAGGAGATGTAGTACCCAG
60.440
50.000
0.00
0.00
0.00
4.45
3531
3654
2.350772
CCAAACTTCACTCATGGCGTTC
60.351
50.000
0.00
0.00
0.00
3.95
3545
3668
3.050275
GTTCCAGAGGCCACGTGC
61.050
66.667
10.91
5.69
40.16
5.34
3572
3695
8.853077
TGAGGGCATTTATAGAATACATGAAG
57.147
34.615
0.00
0.00
0.00
3.02
3588
3711
4.141158
ACATGAAGGGTTTCCTCTCAGTTT
60.141
41.667
0.00
0.00
44.07
2.66
3589
3712
5.073144
ACATGAAGGGTTTCCTCTCAGTTTA
59.927
40.000
0.00
0.00
44.07
2.01
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
44
45
2.499685
GCTCCCGCGACACCTTAT
59.500
61.111
8.23
0.00
0.00
1.73
87
95
3.715495
CCATCTTCGTCTCAATCCAGAG
58.285
50.000
0.00
0.00
36.97
3.35
88
96
2.159043
GCCATCTTCGTCTCAATCCAGA
60.159
50.000
0.00
0.00
0.00
3.86
109
117
3.636231
TGAGGTTCCCGGGCACTG
61.636
66.667
23.02
0.00
0.00
3.66
165
174
1.377366
GATGAGAGGACGTCGCTCCA
61.377
60.000
25.06
21.26
40.89
3.86
303
312
3.274288
CTCCTTGTTCTAACTCCCATGC
58.726
50.000
0.00
0.00
0.00
4.06
331
340
2.670939
GCCTTTCCTTTGGCCATAGAT
58.329
47.619
23.29
0.00
43.11
1.98
382
391
3.070018
CACCTCACTGATTTGTGGTCTC
58.930
50.000
0.00
0.00
40.61
3.36
388
397
1.133823
TGTGCCACCTCACTGATTTGT
60.134
47.619
0.00
0.00
37.81
2.83
391
400
1.901591
CTTGTGCCACCTCACTGATT
58.098
50.000
0.00
0.00
37.81
2.57
424
433
1.905512
GTCCAATGCCGACCCTAGT
59.094
57.895
0.00
0.00
0.00
2.57
504
513
2.995547
GGTAACCCTGTCCGGCAT
59.004
61.111
0.00
0.00
0.00
4.40
516
538
3.063743
GCGCAAGGGCATGGGTAAC
62.064
63.158
0.30
0.00
41.24
2.50
517
539
2.753849
GCGCAAGGGCATGGGTAA
60.754
61.111
0.30
0.00
41.24
2.85
518
540
4.813235
GGCGCAAGGGCATGGGTA
62.813
66.667
10.83
0.00
41.24
3.69
531
553
2.104331
TAGTGCTTCTAGCGGCGC
59.896
61.111
26.86
26.86
46.26
6.53
563
585
2.892425
CCGCGGTCTTCATCCTGC
60.892
66.667
19.50
0.00
0.00
4.85
682
719
8.496751
CATGATGAATTTTATGCAAACACAACA
58.503
29.630
0.00
0.00
0.00
3.33
685
722
6.874664
AGCATGATGAATTTTATGCAAACACA
59.125
30.769
10.23
0.00
46.20
3.72
686
723
7.298507
AGCATGATGAATTTTATGCAAACAC
57.701
32.000
10.23
0.00
46.20
3.32
687
724
7.388224
ACAAGCATGATGAATTTTATGCAAACA
59.612
29.630
10.23
0.00
46.20
2.83
690
727
7.603024
TGAACAAGCATGATGAATTTTATGCAA
59.397
29.630
10.23
0.00
46.20
4.08
696
735
8.225107
CGAATTTGAACAAGCATGATGAATTTT
58.775
29.630
0.00
0.00
0.00
1.82
720
759
2.426738
GTCCCCATGCAATTCAAATCGA
59.573
45.455
0.00
0.00
0.00
3.59
735
774
1.204786
ACGATCCAACCATGTCCCCA
61.205
55.000
0.00
0.00
0.00
4.96
737
776
0.810031
CGACGATCCAACCATGTCCC
60.810
60.000
0.00
0.00
0.00
4.46
765
804
2.034305
ACTTGTCCGCGGATAGTGATAC
59.966
50.000
32.34
20.02
0.00
2.24
766
805
2.034179
CACTTGTCCGCGGATAGTGATA
59.966
50.000
41.34
23.75
39.66
2.15
773
812
2.396590
ATAAACACTTGTCCGCGGAT
57.603
45.000
33.58
13.06
0.00
4.18
835
876
1.073284
GTAAGGGAAAGGAGTGCACCA
59.927
52.381
14.63
0.00
0.00
4.17
871
918
2.034221
GGAGTTGGTGGGGACTGC
59.966
66.667
0.00
0.00
0.00
4.40
878
925
3.717294
CGGGAGGGGAGTTGGTGG
61.717
72.222
0.00
0.00
0.00
4.61
980
1027
2.019984
GGTCAATCTTAGCAAGCTGGG
58.980
52.381
4.53
0.00
0.00
4.45
996
1043
1.002624
GGGCTGTTTGATCCGGTCA
60.003
57.895
0.00
1.42
34.25
4.02
997
1044
2.106683
CGGGCTGTTTGATCCGGTC
61.107
63.158
0.00
0.00
38.93
4.79
998
1045
2.046314
CGGGCTGTTTGATCCGGT
60.046
61.111
0.00
0.00
38.93
5.28
999
1046
1.815421
CTCGGGCTGTTTGATCCGG
60.815
63.158
0.00
0.00
42.44
5.14
1024
1071
2.153547
CTTGGACGCCGGCCATTTTT
62.154
55.000
23.46
0.00
34.90
1.94
1408
1461
2.499685
GCCTTATGGACGGCGAGT
59.500
61.111
16.62
0.00
36.45
4.18
1642
1750
5.119898
GTGTAGAGCTGTGATTCTGAAACAG
59.880
44.000
14.86
14.86
43.37
3.16
1689
1797
0.981183
AATAGGTCCCTGACACGCAA
59.019
50.000
0.00
0.00
33.68
4.85
1710
1818
3.474034
GTCGCTGCTGCTCGTGAC
61.474
66.667
14.03
16.10
36.97
3.67
1711
1819
4.724602
GGTCGCTGCTGCTCGTGA
62.725
66.667
14.03
7.88
36.97
4.35
1784
1892
2.028484
GTGTTGACGACGAGGCCA
59.972
61.111
5.01
0.00
0.00
5.36
1829
1937
2.298158
CTTGGCGGCGTATCCTGTCT
62.298
60.000
9.37
0.00
0.00
3.41
1845
1953
0.038526
ACGAAGGCCACGTCTACTTG
60.039
55.000
19.44
0.00
39.87
3.16
1848
1956
2.092882
GCACGAAGGCCACGTCTAC
61.093
63.158
21.65
12.47
42.07
2.59
1850
1958
3.575351
GAGCACGAAGGCCACGTCT
62.575
63.158
21.65
19.87
42.07
4.18
2069
2177
2.605295
TCCCGTCGGACAACCCAT
60.605
61.111
14.39
0.00
31.13
4.00
2111
2219
1.923395
AAATCCCTCCGGCAGACCA
60.923
57.895
0.00
0.00
34.57
4.02
2114
2222
0.469917
GATCAAATCCCTCCGGCAGA
59.530
55.000
0.00
0.00
0.00
4.26
2147
2255
0.325296
ACGGGATCACCTTGCCTCTA
60.325
55.000
0.00
0.00
36.97
2.43
2206
2314
1.826385
GTTGTGGGTCCAGAATCCAG
58.174
55.000
2.88
0.00
31.94
3.86
2210
2318
1.303317
GCCGTTGTGGGTCCAGAAT
60.303
57.895
2.88
0.00
38.63
2.40
2273
2381
1.509463
CGCAAAGTGAGGCATGCAT
59.491
52.632
21.36
13.78
38.69
3.96
2458
2566
1.200020
CACCATTTTCCAAGCTCGACC
59.800
52.381
0.00
0.00
0.00
4.79
2463
2571
1.147817
AGACCCACCATTTTCCAAGCT
59.852
47.619
0.00
0.00
0.00
3.74
2473
2581
3.052490
AGCTAGTAGAGAAGACCCACCAT
60.052
47.826
0.00
0.00
0.00
3.55
2508
2616
8.988064
AATTACAAAGACGATATATGCTCGAT
57.012
30.769
14.23
2.72
39.38
3.59
2533
2641
9.737427
ATTTCAAATAACGACACAACACAAATA
57.263
25.926
0.00
0.00
0.00
1.40
2576
2684
5.883673
GCCAATAACACCACTTATCCAGTTA
59.116
40.000
0.00
0.00
30.92
2.24
2630
2738
7.254387
GCATGCAAACAAAGTCACTTCAAAATA
60.254
33.333
14.21
0.00
0.00
1.40
2633
2741
4.329528
GCATGCAAACAAAGTCACTTCAAA
59.670
37.500
14.21
0.00
0.00
2.69
2644
2752
3.620374
ACGTTTTCATGCATGCAAACAAA
59.380
34.783
36.66
23.72
41.72
2.83
2664
2772
9.370126
CACACAAAAGAAAGTCTTAGATTTACG
57.630
33.333
0.00
0.00
35.27
3.18
2681
2790
7.579589
TGAAAGTTCAATTCACACACAAAAG
57.420
32.000
0.00
0.00
33.55
2.27
2707
2817
5.013079
TCCTTGTGACTGTAGTGATCCATTT
59.987
40.000
0.00
0.00
0.00
2.32
2750
2866
1.581934
ATGCGGTGTGGATTCGTATG
58.418
50.000
0.00
0.00
0.00
2.39
2770
2886
1.904378
GGGCCGCACCTACCAAAAA
60.904
57.895
0.00
0.00
39.10
1.94
2771
2887
2.282603
GGGCCGCACCTACCAAAA
60.283
61.111
0.00
0.00
39.10
2.44
2772
2888
2.830186
GATGGGCCGCACCTACCAAA
62.830
60.000
0.00
0.00
39.10
3.28
2773
2889
3.334891
ATGGGCCGCACCTACCAA
61.335
61.111
0.00
0.00
39.10
3.67
2776
2892
2.203070
CAGATGGGCCGCACCTAC
60.203
66.667
0.00
0.00
39.10
3.18
2777
2893
2.364973
TCAGATGGGCCGCACCTA
60.365
61.111
0.00
0.00
39.10
3.08
2778
2894
3.790437
CTCAGATGGGCCGCACCT
61.790
66.667
0.00
0.00
39.10
4.00
2780
2896
2.985512
CTAGCTCAGATGGGCCGCAC
62.986
65.000
0.00
0.00
0.00
5.34
2781
2897
2.763710
TAGCTCAGATGGGCCGCA
60.764
61.111
0.00
0.00
0.00
5.69
2782
2898
2.030262
CTAGCTCAGATGGGCCGC
59.970
66.667
0.00
0.00
0.00
6.53
2783
2899
2.030262
GCTAGCTCAGATGGGCCG
59.970
66.667
7.70
0.00
0.00
6.13
2784
2900
0.833834
TAGGCTAGCTCAGATGGGCC
60.834
60.000
15.72
0.00
39.82
5.80
2785
2901
1.274712
ATAGGCTAGCTCAGATGGGC
58.725
55.000
15.72
0.00
0.00
5.36
2786
2902
3.707316
AGTATAGGCTAGCTCAGATGGG
58.293
50.000
15.72
0.00
0.00
4.00
2787
2903
5.712446
TGTAAGTATAGGCTAGCTCAGATGG
59.288
44.000
15.72
0.00
0.00
3.51
2788
2904
6.825944
TGTAAGTATAGGCTAGCTCAGATG
57.174
41.667
15.72
0.00
0.00
2.90
2789
2905
6.379703
CCATGTAAGTATAGGCTAGCTCAGAT
59.620
42.308
15.72
5.65
0.00
2.90
2790
2906
5.712446
CCATGTAAGTATAGGCTAGCTCAGA
59.288
44.000
15.72
0.00
0.00
3.27
2791
2907
5.478679
ACCATGTAAGTATAGGCTAGCTCAG
59.521
44.000
15.72
0.00
0.00
3.35
2792
2908
5.394738
ACCATGTAAGTATAGGCTAGCTCA
58.605
41.667
15.72
2.72
0.00
4.26
2793
2909
5.986501
ACCATGTAAGTATAGGCTAGCTC
57.013
43.478
15.72
4.82
0.00
4.09
2794
2910
6.749036
AAACCATGTAAGTATAGGCTAGCT
57.251
37.500
15.72
3.22
0.00
3.32
2795
2911
6.293462
GCAAAACCATGTAAGTATAGGCTAGC
60.293
42.308
6.04
6.04
0.00
3.42
2796
2912
6.992715
AGCAAAACCATGTAAGTATAGGCTAG
59.007
38.462
0.00
0.00
0.00
3.42
2797
2913
6.895782
AGCAAAACCATGTAAGTATAGGCTA
58.104
36.000
0.00
0.00
0.00
3.93
2798
2914
5.755849
AGCAAAACCATGTAAGTATAGGCT
58.244
37.500
0.00
0.00
0.00
4.58
2799
2915
5.008712
GGAGCAAAACCATGTAAGTATAGGC
59.991
44.000
0.00
0.00
0.00
3.93
2800
2916
5.531287
GGGAGCAAAACCATGTAAGTATAGG
59.469
44.000
0.00
0.00
0.00
2.57
2801
2917
6.357367
AGGGAGCAAAACCATGTAAGTATAG
58.643
40.000
0.00
0.00
0.00
1.31
2802
2918
6.321821
AGGGAGCAAAACCATGTAAGTATA
57.678
37.500
0.00
0.00
0.00
1.47
2803
2919
5.193099
AGGGAGCAAAACCATGTAAGTAT
57.807
39.130
0.00
0.00
0.00
2.12
2804
2920
4.650972
AGGGAGCAAAACCATGTAAGTA
57.349
40.909
0.00
0.00
0.00
2.24
2805
2921
3.525800
AGGGAGCAAAACCATGTAAGT
57.474
42.857
0.00
0.00
0.00
2.24
2806
2922
4.589908
AGTAGGGAGCAAAACCATGTAAG
58.410
43.478
0.00
0.00
0.00
2.34
2807
2923
4.042311
TGAGTAGGGAGCAAAACCATGTAA
59.958
41.667
0.00
0.00
0.00
2.41
2808
2924
3.585289
TGAGTAGGGAGCAAAACCATGTA
59.415
43.478
0.00
0.00
0.00
2.29
2809
2925
2.375174
TGAGTAGGGAGCAAAACCATGT
59.625
45.455
0.00
0.00
0.00
3.21
2810
2926
2.749621
GTGAGTAGGGAGCAAAACCATG
59.250
50.000
0.00
0.00
0.00
3.66
2835
2951
6.720288
GTCTAGGTAGGGAGTTTGCTATATCA
59.280
42.308
0.00
0.00
0.00
2.15
2842
2958
4.650131
ACTATGTCTAGGTAGGGAGTTTGC
59.350
45.833
0.00
0.00
0.00
3.68
2859
2975
7.667043
TGATGAAACGAAGCTTTTACTATGT
57.333
32.000
0.00
0.00
0.00
2.29
2877
2993
2.170166
GTGGCATCCCTTGTTGATGAA
58.830
47.619
4.52
0.00
41.72
2.57
2881
2997
1.619654
CAAGTGGCATCCCTTGTTGA
58.380
50.000
7.88
0.00
34.67
3.18
2889
3005
3.152341
CAATAGATCCCAAGTGGCATCC
58.848
50.000
0.00
0.00
0.00
3.51
2890
3006
3.152341
CCAATAGATCCCAAGTGGCATC
58.848
50.000
0.00
0.00
0.00
3.91
2909
3026
1.581640
TGATAACCTACCTAGCCCCCA
59.418
52.381
0.00
0.00
0.00
4.96
2924
3041
4.934602
TCATCGTTGTTGCTGACATGATAA
59.065
37.500
0.00
0.00
38.26
1.75
2935
3052
3.545633
GAAACAGACTCATCGTTGTTGC
58.454
45.455
0.00
0.00
34.28
4.17
2942
3059
2.921634
TCCTCGAAACAGACTCATCG
57.078
50.000
0.00
0.00
36.67
3.84
2952
3069
3.320673
AGACACCTTCATCCTCGAAAC
57.679
47.619
0.00
0.00
0.00
2.78
2956
3073
2.428890
AGCTTAGACACCTTCATCCTCG
59.571
50.000
0.00
0.00
0.00
4.63
3047
3164
8.771920
TCTTCACTTAATGTCGTTTCATGTAT
57.228
30.769
0.00
0.00
0.00
2.29
3052
3169
5.924254
ACGATCTTCACTTAATGTCGTTTCA
59.076
36.000
0.00
0.00
35.05
2.69
3063
3180
5.477291
ACAAAGGAGAGACGATCTTCACTTA
59.523
40.000
1.65
0.00
38.84
2.24
3070
3187
3.128938
CCGTAACAAAGGAGAGACGATCT
59.871
47.826
0.00
0.00
42.61
2.75
3071
3188
3.128242
TCCGTAACAAAGGAGAGACGATC
59.872
47.826
0.00
0.00
32.20
3.69
3072
3189
3.087031
TCCGTAACAAAGGAGAGACGAT
58.913
45.455
0.00
0.00
32.20
3.73
3073
3190
2.507484
TCCGTAACAAAGGAGAGACGA
58.493
47.619
0.00
0.00
32.20
4.20
3074
3191
3.293311
TTCCGTAACAAAGGAGAGACG
57.707
47.619
0.00
0.00
37.88
4.18
3075
3192
5.699458
TGATTTTCCGTAACAAAGGAGAGAC
59.301
40.000
0.00
0.00
37.88
3.36
3076
3193
5.860611
TGATTTTCCGTAACAAAGGAGAGA
58.139
37.500
0.00
0.00
37.88
3.10
3077
3194
6.183360
GGATGATTTTCCGTAACAAAGGAGAG
60.183
42.308
0.00
0.00
37.88
3.20
3078
3195
5.646360
GGATGATTTTCCGTAACAAAGGAGA
59.354
40.000
0.00
0.00
37.88
3.71
3079
3196
5.648092
AGGATGATTTTCCGTAACAAAGGAG
59.352
40.000
0.00
0.00
40.94
3.69
3080
3197
5.566469
AGGATGATTTTCCGTAACAAAGGA
58.434
37.500
0.00
0.00
40.94
3.36
3081
3198
5.897377
AGGATGATTTTCCGTAACAAAGG
57.103
39.130
0.00
0.00
40.94
3.11
3082
3199
6.373216
TGGTAGGATGATTTTCCGTAACAAAG
59.627
38.462
0.00
0.00
40.94
2.77
3083
3200
6.149807
GTGGTAGGATGATTTTCCGTAACAAA
59.850
38.462
0.00
0.00
40.94
2.83
3138
3257
3.950397
TGGACTAAACTCATTGCCGATT
58.050
40.909
0.00
0.00
0.00
3.34
3142
3261
4.278419
ACAAGTTGGACTAAACTCATTGCC
59.722
41.667
7.96
0.00
39.48
4.52
3143
3262
5.215160
CACAAGTTGGACTAAACTCATTGC
58.785
41.667
7.96
0.00
39.48
3.56
3165
3284
2.042261
GGACTAAGCCCCCTCCCA
59.958
66.667
0.00
0.00
0.00
4.37
3175
3294
3.066900
CACACCCTCGTAGATGGACTAAG
59.933
52.174
0.00
0.00
45.53
2.18
3191
3310
2.594592
AAACTGCCGCTCACACCC
60.595
61.111
0.00
0.00
0.00
4.61
3201
3320
4.722855
AATGCCGCGCAAACTGCC
62.723
61.111
8.75
0.00
43.62
4.85
3205
3324
1.203812
CCAAAAATGCCGCGCAAAC
59.796
52.632
8.75
0.00
43.62
2.93
3224
3343
5.410924
TGATCATGTTGTAGACGAGAAAGG
58.589
41.667
0.00
0.00
0.00
3.11
3226
3345
7.147897
ACCTATGATCATGTTGTAGACGAGAAA
60.148
37.037
18.72
0.00
0.00
2.52
3232
3351
5.986135
GGTGACCTATGATCATGTTGTAGAC
59.014
44.000
18.72
11.13
0.00
2.59
3247
3366
1.192428
GGAAGTCGGTGGTGACCTAT
58.808
55.000
2.11
0.00
40.58
2.57
3282
3401
3.697439
ATCCGCCAACACCCCGATG
62.697
63.158
0.00
0.00
0.00
3.84
3304
3423
2.996621
GAGCTACATCAACACGCTTCTT
59.003
45.455
0.00
0.00
0.00
2.52
3315
3434
3.925379
TGCTTTCTTTCGAGCTACATCA
58.075
40.909
0.00
0.00
39.60
3.07
3325
3447
6.129009
CCAAATTGTCTTGATGCTTTCTTTCG
60.129
38.462
0.00
0.00
0.00
3.46
3329
3451
5.563475
CGACCAAATTGTCTTGATGCTTTCT
60.563
40.000
0.00
0.00
32.97
2.52
3334
3456
3.559238
ACGACCAAATTGTCTTGATGC
57.441
42.857
0.00
0.00
32.97
3.91
3349
3471
0.033504
TGAAGCTGTCTCCAACGACC
59.966
55.000
0.00
0.00
32.97
4.79
3360
3482
0.250467
AATCACGCACCTGAAGCTGT
60.250
50.000
0.00
0.00
0.00
4.40
3361
3483
0.877071
AAATCACGCACCTGAAGCTG
59.123
50.000
0.00
0.00
0.00
4.24
3386
3508
3.736483
GCATACATGGCAGGTCCG
58.264
61.111
8.59
1.84
37.80
4.79
3401
3523
3.693578
TCGATGCTTATGAAAATGTGGCA
59.306
39.130
0.00
0.00
0.00
4.92
3446
3569
4.680975
GCTGGGTACTACATCTCCTCAAAC
60.681
50.000
0.00
0.00
0.00
2.93
3458
3581
2.743179
GGGCCAGGCTGGGTACTAC
61.743
68.421
33.43
16.15
38.19
2.73
3468
3591
1.754234
CACCAACATAGGGCCAGGC
60.754
63.158
6.18
1.26
0.00
4.85
3545
3668
7.397221
TCATGTATTCTATAAATGCCCTCAGG
58.603
38.462
0.00
0.00
0.00
3.86
3547
3670
7.884877
CCTTCATGTATTCTATAAATGCCCTCA
59.115
37.037
0.00
0.00
0.00
3.86
3556
3679
9.225682
AGAGGAAACCCTTCATGTATTCTATAA
57.774
33.333
0.00
0.00
33.25
0.98
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.