Multiple sequence alignment - TraesCS4A01G243700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G243700 chr4A 100.000 2897 0 0 1 2897 554541730 554544626 0.000000e+00 5350.0
1 TraesCS4A01G243700 chr4A 96.234 1195 34 8 793 1982 554558156 554559344 0.000000e+00 1947.0
2 TraesCS4A01G243700 chr4A 91.383 1381 82 13 760 2125 554629611 554630969 0.000000e+00 1857.0
3 TraesCS4A01G243700 chr4A 88.320 762 44 19 2167 2897 554631051 554631798 0.000000e+00 872.0
4 TraesCS4A01G243700 chr4A 89.620 684 42 13 2132 2798 554559457 554560128 0.000000e+00 843.0
5 TraesCS4A01G243700 chr4B 90.420 1357 96 13 795 2133 65543217 65541877 0.000000e+00 1755.0
6 TraesCS4A01G243700 chr4B 90.978 1319 94 7 828 2133 65115911 65114605 0.000000e+00 1753.0
7 TraesCS4A01G243700 chr4B 90.408 1324 98 9 826 2133 64808849 64807539 0.000000e+00 1714.0
8 TraesCS4A01G243700 chr4B 90.310 1321 95 11 819 2133 65165183 65163890 0.000000e+00 1700.0
9 TraesCS4A01G243700 chr4B 89.970 1326 96 15 737 2036 65645260 65643946 0.000000e+00 1677.0
10 TraesCS4A01G243700 chr4B 90.065 1228 94 11 832 2036 65639621 65638399 0.000000e+00 1567.0
11 TraesCS4A01G243700 chr4B 92.074 1085 81 2 819 1898 64827613 64826529 0.000000e+00 1522.0
12 TraesCS4A01G243700 chr4B 92.241 696 45 3 1 695 63844358 63845045 0.000000e+00 977.0
13 TraesCS4A01G243700 chr4B 91.908 692 48 2 4 695 63770156 63769473 0.000000e+00 961.0
14 TraesCS4A01G243700 chr4B 88.922 677 44 18 2138 2797 64826283 64825621 0.000000e+00 806.0
15 TraesCS4A01G243700 chr4B 88.791 678 44 18 2138 2797 65163825 65163162 0.000000e+00 802.0
16 TraesCS4A01G243700 chr4B 87.316 678 53 16 2138 2797 65114539 65113877 0.000000e+00 745.0
17 TraesCS4A01G243700 chr4B 87.316 678 53 16 2138 2797 65541811 65541149 0.000000e+00 745.0
18 TraesCS4A01G243700 chr4B 86.788 439 41 11 2138 2567 64807479 64807049 9.390000e-130 473.0
19 TraesCS4A01G243700 chr4B 91.139 237 8 3 2566 2797 64806952 64806724 2.800000e-80 309.0
20 TraesCS4A01G243700 chr4B 92.982 171 8 1 2633 2799 65619241 65619071 2.230000e-61 246.0
21 TraesCS4A01G243700 chr4B 87.117 163 14 4 2472 2627 65619542 65619380 8.250000e-41 178.0
22 TraesCS4A01G243700 chr4B 88.034 117 10 2 2138 2250 65093525 65093409 5.040000e-28 135.0
23 TraesCS4A01G243700 chr4B 88.034 117 10 2 2138 2250 65522133 65522017 5.040000e-28 135.0
24 TraesCS4A01G243700 chr4B 84.615 117 11 3 2138 2250 65597814 65597701 3.050000e-20 110.0
25 TraesCS4A01G243700 chr4B 97.959 49 1 0 2832 2880 64825615 64825567 5.140000e-13 86.1
26 TraesCS4A01G243700 chr4B 97.959 49 1 0 2832 2880 65113871 65113823 5.140000e-13 86.1
27 TraesCS4A01G243700 chr4B 97.959 49 1 0 2832 2880 65163156 65163108 5.140000e-13 86.1
28 TraesCS4A01G243700 chr4B 97.959 49 1 0 2832 2880 65541143 65541095 5.140000e-13 86.1
29 TraesCS4A01G243700 chr4D 90.200 1347 91 17 737 2055 44986513 44985180 0.000000e+00 1718.0
30 TraesCS4A01G243700 chr4D 86.859 799 61 21 2130 2897 44985074 44984289 0.000000e+00 854.0
31 TraesCS4A01G243700 chr2D 92.120 698 47 3 4 700 638262175 638261485 0.000000e+00 977.0
32 TraesCS4A01G243700 chr7D 91.942 695 48 2 1 695 458590481 458591167 0.000000e+00 966.0
33 TraesCS4A01G243700 chr3B 92.063 693 45 4 4 695 22697949 22698632 0.000000e+00 966.0
34 TraesCS4A01G243700 chr7B 91.810 696 48 4 1 695 337146936 337147623 0.000000e+00 961.0
35 TraesCS4A01G243700 chrUn 91.763 692 49 3 4 695 168915 168232 0.000000e+00 955.0
36 TraesCS4A01G243700 chrUn 89.922 258 10 7 2549 2797 309938782 309938532 4.660000e-83 318.0
37 TraesCS4A01G243700 chrUn 97.959 49 1 0 2832 2880 309938526 309938478 5.140000e-13 86.1
38 TraesCS4A01G243700 chr5D 91.655 695 50 2 1 695 551966973 551967659 0.000000e+00 955.0
39 TraesCS4A01G243700 chr3A 91.655 695 50 2 1 695 113916435 113917121 0.000000e+00 955.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G243700 chr4A 554541730 554544626 2896 False 5350.000000 5350 100.000000 1 2897 1 chr4A.!!$F1 2896
1 TraesCS4A01G243700 chr4A 554558156 554560128 1972 False 1395.000000 1947 92.927000 793 2798 2 chr4A.!!$F2 2005
2 TraesCS4A01G243700 chr4A 554629611 554631798 2187 False 1364.500000 1857 89.851500 760 2897 2 chr4A.!!$F3 2137
3 TraesCS4A01G243700 chr4B 65643946 65645260 1314 True 1677.000000 1677 89.970000 737 2036 1 chr4B.!!$R6 1299
4 TraesCS4A01G243700 chr4B 65638399 65639621 1222 True 1567.000000 1567 90.065000 832 2036 1 chr4B.!!$R5 1204
5 TraesCS4A01G243700 chr4B 63844358 63845045 687 False 977.000000 977 92.241000 1 695 1 chr4B.!!$F1 694
6 TraesCS4A01G243700 chr4B 63769473 63770156 683 True 961.000000 961 91.908000 4 695 1 chr4B.!!$R1 691
7 TraesCS4A01G243700 chr4B 65163108 65165183 2075 True 862.700000 1700 92.353333 819 2880 3 chr4B.!!$R10 2061
8 TraesCS4A01G243700 chr4B 65541095 65543217 2122 True 862.033333 1755 91.898333 795 2880 3 chr4B.!!$R11 2085
9 TraesCS4A01G243700 chr4B 65113823 65115911 2088 True 861.366667 1753 92.084333 828 2880 3 chr4B.!!$R9 2052
10 TraesCS4A01G243700 chr4B 64806724 64808849 2125 True 832.000000 1714 89.445000 826 2797 3 chr4B.!!$R7 1971
11 TraesCS4A01G243700 chr4B 64825567 64827613 2046 True 804.700000 1522 92.985000 819 2880 3 chr4B.!!$R8 2061
12 TraesCS4A01G243700 chr4D 44984289 44986513 2224 True 1286.000000 1718 88.529500 737 2897 2 chr4D.!!$R1 2160
13 TraesCS4A01G243700 chr2D 638261485 638262175 690 True 977.000000 977 92.120000 4 700 1 chr2D.!!$R1 696
14 TraesCS4A01G243700 chr7D 458590481 458591167 686 False 966.000000 966 91.942000 1 695 1 chr7D.!!$F1 694
15 TraesCS4A01G243700 chr3B 22697949 22698632 683 False 966.000000 966 92.063000 4 695 1 chr3B.!!$F1 691
16 TraesCS4A01G243700 chr7B 337146936 337147623 687 False 961.000000 961 91.810000 1 695 1 chr7B.!!$F1 694
17 TraesCS4A01G243700 chrUn 168232 168915 683 True 955.000000 955 91.763000 4 695 1 chrUn.!!$R1 691
18 TraesCS4A01G243700 chr5D 551966973 551967659 686 False 955.000000 955 91.655000 1 695 1 chr5D.!!$F1 694
19 TraesCS4A01G243700 chr3A 113916435 113917121 686 False 955.000000 955 91.655000 1 695 1 chr3A.!!$F1 694

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 607 0.027848 GCTCTACGACTGGTCTACGC 59.972 60.0 0.0 0.0 0.0 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1938 2034 1.00444 AGTCTTCCTTGCACGAGCC 60.004 57.895 1.39 0.0 41.13 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.189521 CCATAAGACGGGCCGCTT 59.810 61.111 28.92 28.92 0.00 4.68
117 118 1.371183 CACGGCCACCTTCTTCTCA 59.629 57.895 2.24 0.00 0.00 3.27
126 127 3.710677 CCACCTTCTTCTCATCCAGATCT 59.289 47.826 0.00 0.00 0.00 2.75
210 211 2.103042 GGTCTGCACGACATCTGCC 61.103 63.158 15.22 0.00 44.68 4.85
211 212 1.374631 GTCTGCACGACATCTGCCA 60.375 57.895 10.30 0.00 42.37 4.92
212 213 1.374631 TCTGCACGACATCTGCCAC 60.375 57.895 0.00 0.00 33.36 5.01
213 214 2.733671 CTGCACGACATCTGCCACG 61.734 63.158 0.00 0.00 33.36 4.94
214 215 3.490759 GCACGACATCTGCCACGG 61.491 66.667 0.00 0.00 0.00 4.94
215 216 2.048222 CACGACATCTGCCACGGT 60.048 61.111 0.00 0.00 0.00 4.83
216 217 1.214325 CACGACATCTGCCACGGTA 59.786 57.895 0.00 0.00 0.00 4.02
217 218 0.179111 CACGACATCTGCCACGGTAT 60.179 55.000 0.00 0.00 0.00 2.73
218 219 0.102481 ACGACATCTGCCACGGTATC 59.898 55.000 0.00 0.00 0.00 2.24
219 220 0.597637 CGACATCTGCCACGGTATCC 60.598 60.000 0.00 0.00 0.00 2.59
229 230 3.524606 CGGTATCCGCACCCGTCT 61.525 66.667 0.00 0.00 41.17 4.18
230 231 2.897972 GGTATCCGCACCCGTCTT 59.102 61.111 0.00 0.00 31.91 3.01
231 232 1.227176 GGTATCCGCACCCGTCTTC 60.227 63.158 0.00 0.00 31.91 2.87
232 233 1.673808 GGTATCCGCACCCGTCTTCT 61.674 60.000 0.00 0.00 31.91 2.85
233 234 0.527817 GTATCCGCACCCGTCTTCTG 60.528 60.000 0.00 0.00 0.00 3.02
234 235 2.292794 TATCCGCACCCGTCTTCTGC 62.293 60.000 0.00 0.00 0.00 4.26
235 236 4.680237 CCGCACCCGTCTTCTGCA 62.680 66.667 0.00 0.00 0.00 4.41
236 237 3.114616 CGCACCCGTCTTCTGCAG 61.115 66.667 7.63 7.63 0.00 4.41
237 238 2.343758 GCACCCGTCTTCTGCAGA 59.656 61.111 13.74 13.74 0.00 4.26
238 239 1.078848 GCACCCGTCTTCTGCAGAT 60.079 57.895 19.04 0.00 32.60 2.90
239 240 1.086634 GCACCCGTCTTCTGCAGATC 61.087 60.000 19.04 10.31 32.60 2.75
240 241 0.534412 CACCCGTCTTCTGCAGATCT 59.466 55.000 19.04 0.00 32.60 2.75
241 242 0.820871 ACCCGTCTTCTGCAGATCTC 59.179 55.000 19.04 9.60 32.60 2.75
242 243 0.103937 CCCGTCTTCTGCAGATCTCC 59.896 60.000 19.04 5.23 32.60 3.71
243 244 0.248825 CCGTCTTCTGCAGATCTCCG 60.249 60.000 19.04 16.38 32.60 4.63
244 245 0.453793 CGTCTTCTGCAGATCTCCGT 59.546 55.000 19.04 0.00 32.60 4.69
245 246 1.532921 CGTCTTCTGCAGATCTCCGTC 60.533 57.143 19.04 3.69 32.60 4.79
246 247 1.107114 TCTTCTGCAGATCTCCGTCC 58.893 55.000 19.04 0.00 0.00 4.79
247 248 0.248825 CTTCTGCAGATCTCCGTCCG 60.249 60.000 19.04 0.00 0.00 4.79
248 249 2.279120 CTGCAGATCTCCGTCCGC 60.279 66.667 8.42 0.00 0.00 5.54
249 250 4.193334 TGCAGATCTCCGTCCGCG 62.193 66.667 0.00 0.00 37.95 6.46
250 251 3.889044 GCAGATCTCCGTCCGCGA 61.889 66.667 8.23 0.00 41.33 5.87
251 252 2.024871 CAGATCTCCGTCCGCGAC 59.975 66.667 8.23 2.72 41.33 5.19
252 253 2.437895 AGATCTCCGTCCGCGACA 60.438 61.111 8.23 0.00 41.33 4.35
253 254 2.024871 GATCTCCGTCCGCGACAG 59.975 66.667 8.23 0.00 41.33 3.51
254 255 4.194720 ATCTCCGTCCGCGACAGC 62.195 66.667 8.23 0.00 41.33 4.40
274 275 4.729918 CTTCGCCAGGGCCTTGCT 62.730 66.667 25.24 0.00 37.98 3.91
275 276 4.722700 TTCGCCAGGGCCTTGCTC 62.723 66.667 25.24 2.22 37.98 4.26
278 279 4.453892 GCCAGGGCCTTGCTCCAT 62.454 66.667 21.62 0.00 34.56 3.41
279 280 2.123982 CCAGGGCCTTGCTCCATC 60.124 66.667 9.90 0.00 0.00 3.51
280 281 2.123982 CAGGGCCTTGCTCCATCC 60.124 66.667 1.32 0.00 0.00 3.51
281 282 3.801997 AGGGCCTTGCTCCATCCG 61.802 66.667 0.00 0.00 0.00 4.18
282 283 3.797353 GGGCCTTGCTCCATCCGA 61.797 66.667 0.84 0.00 0.00 4.55
283 284 2.203126 GGCCTTGCTCCATCCGAG 60.203 66.667 0.00 0.00 42.04 4.63
291 292 1.227497 CTCCATCCGAGCCAGAAGC 60.227 63.158 0.00 0.00 44.25 3.86
300 301 3.588336 GCCAGAAGCAAGCAGGAG 58.412 61.111 0.00 0.00 42.97 3.69
301 302 1.002868 GCCAGAAGCAAGCAGGAGA 60.003 57.895 0.00 0.00 42.97 3.71
302 303 0.607489 GCCAGAAGCAAGCAGGAGAA 60.607 55.000 0.00 0.00 42.97 2.87
303 304 1.451067 CCAGAAGCAAGCAGGAGAAG 58.549 55.000 0.00 0.00 0.00 2.85
304 305 1.002888 CCAGAAGCAAGCAGGAGAAGA 59.997 52.381 0.00 0.00 0.00 2.87
305 306 2.348660 CAGAAGCAAGCAGGAGAAGAG 58.651 52.381 0.00 0.00 0.00 2.85
306 307 2.028294 CAGAAGCAAGCAGGAGAAGAGA 60.028 50.000 0.00 0.00 0.00 3.10
307 308 2.234414 AGAAGCAAGCAGGAGAAGAGAG 59.766 50.000 0.00 0.00 0.00 3.20
308 309 0.903942 AGCAAGCAGGAGAAGAGAGG 59.096 55.000 0.00 0.00 0.00 3.69
309 310 0.107752 GCAAGCAGGAGAAGAGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
310 311 1.566211 CAAGCAGGAGAAGAGAGGGA 58.434 55.000 0.00 0.00 0.00 4.20
311 312 1.481772 CAAGCAGGAGAAGAGAGGGAG 59.518 57.143 0.00 0.00 0.00 4.30
312 313 0.032217 AGCAGGAGAAGAGAGGGAGG 60.032 60.000 0.00 0.00 0.00 4.30
313 314 1.685355 GCAGGAGAAGAGAGGGAGGC 61.685 65.000 0.00 0.00 0.00 4.70
314 315 1.076339 AGGAGAAGAGAGGGAGGCG 60.076 63.158 0.00 0.00 0.00 5.52
315 316 2.131067 GGAGAAGAGAGGGAGGCGG 61.131 68.421 0.00 0.00 0.00 6.13
316 317 2.762043 AGAAGAGAGGGAGGCGGC 60.762 66.667 0.00 0.00 0.00 6.53
317 318 4.214327 GAAGAGAGGGAGGCGGCG 62.214 72.222 0.51 0.51 0.00 6.46
331 332 3.936203 GGCGGTGGTGACTGGTGA 61.936 66.667 0.00 0.00 0.00 4.02
332 333 2.357517 GCGGTGGTGACTGGTGAG 60.358 66.667 0.00 0.00 0.00 3.51
333 334 2.357517 CGGTGGTGACTGGTGAGC 60.358 66.667 0.00 0.00 0.00 4.26
334 335 2.357517 GGTGGTGACTGGTGAGCG 60.358 66.667 0.00 0.00 0.00 5.03
335 336 2.734591 GTGGTGACTGGTGAGCGA 59.265 61.111 0.00 0.00 0.00 4.93
336 337 1.373497 GTGGTGACTGGTGAGCGAG 60.373 63.158 0.00 0.00 0.00 5.03
337 338 2.433318 GGTGACTGGTGAGCGAGC 60.433 66.667 0.00 0.00 0.00 5.03
338 339 2.340078 GTGACTGGTGAGCGAGCA 59.660 61.111 0.00 0.00 0.00 4.26
342 343 2.433838 CTGGTGAGCGAGCAGGTG 60.434 66.667 9.42 0.00 45.05 4.00
343 344 3.947132 CTGGTGAGCGAGCAGGTGG 62.947 68.421 9.42 0.00 45.05 4.61
344 345 4.767255 GGTGAGCGAGCAGGTGGG 62.767 72.222 0.00 0.00 0.00 4.61
345 346 4.767255 GTGAGCGAGCAGGTGGGG 62.767 72.222 0.00 0.00 0.00 4.96
347 348 4.767255 GAGCGAGCAGGTGGGGTG 62.767 72.222 0.00 0.00 0.00 4.61
362 363 4.083862 GTGGCCGGTGAGGGAGAC 62.084 72.222 1.90 0.00 41.48 3.36
366 367 3.760035 CCGGTGAGGGAGACGGTG 61.760 72.222 0.00 0.00 41.34 4.94
367 368 2.675423 CGGTGAGGGAGACGGTGA 60.675 66.667 0.00 0.00 0.00 4.02
368 369 2.701780 CGGTGAGGGAGACGGTGAG 61.702 68.421 0.00 0.00 0.00 3.51
369 370 2.352032 GGTGAGGGAGACGGTGAGG 61.352 68.421 0.00 0.00 0.00 3.86
370 371 1.606889 GTGAGGGAGACGGTGAGGT 60.607 63.158 0.00 0.00 0.00 3.85
371 372 0.323178 GTGAGGGAGACGGTGAGGTA 60.323 60.000 0.00 0.00 0.00 3.08
372 373 0.034380 TGAGGGAGACGGTGAGGTAG 60.034 60.000 0.00 0.00 0.00 3.18
373 374 0.255318 GAGGGAGACGGTGAGGTAGA 59.745 60.000 0.00 0.00 0.00 2.59
374 375 0.256464 AGGGAGACGGTGAGGTAGAG 59.744 60.000 0.00 0.00 0.00 2.43
375 376 1.385756 GGGAGACGGTGAGGTAGAGC 61.386 65.000 0.00 0.00 0.00 4.09
376 377 0.680280 GGAGACGGTGAGGTAGAGCA 60.680 60.000 0.00 0.00 0.00 4.26
377 378 0.736053 GAGACGGTGAGGTAGAGCAG 59.264 60.000 0.00 0.00 0.00 4.24
378 379 0.328592 AGACGGTGAGGTAGAGCAGA 59.671 55.000 0.00 0.00 0.00 4.26
379 380 0.736053 GACGGTGAGGTAGAGCAGAG 59.264 60.000 0.00 0.00 0.00 3.35
380 381 0.328592 ACGGTGAGGTAGAGCAGAGA 59.671 55.000 0.00 0.00 0.00 3.10
381 382 1.021202 CGGTGAGGTAGAGCAGAGAG 58.979 60.000 0.00 0.00 0.00 3.20
382 383 1.398692 GGTGAGGTAGAGCAGAGAGG 58.601 60.000 0.00 0.00 0.00 3.69
383 384 1.064314 GGTGAGGTAGAGCAGAGAGGA 60.064 57.143 0.00 0.00 0.00 3.71
384 385 2.297701 GTGAGGTAGAGCAGAGAGGAG 58.702 57.143 0.00 0.00 0.00 3.69
385 386 1.214175 TGAGGTAGAGCAGAGAGGAGG 59.786 57.143 0.00 0.00 0.00 4.30
386 387 0.555769 AGGTAGAGCAGAGAGGAGGG 59.444 60.000 0.00 0.00 0.00 4.30
387 388 0.553819 GGTAGAGCAGAGAGGAGGGA 59.446 60.000 0.00 0.00 0.00 4.20
388 389 1.478654 GGTAGAGCAGAGAGGAGGGAG 60.479 61.905 0.00 0.00 0.00 4.30
389 390 1.493022 GTAGAGCAGAGAGGAGGGAGA 59.507 57.143 0.00 0.00 0.00 3.71
390 391 0.552848 AGAGCAGAGAGGAGGGAGAG 59.447 60.000 0.00 0.00 0.00 3.20
391 392 0.468029 GAGCAGAGAGGAGGGAGAGG 60.468 65.000 0.00 0.00 0.00 3.69
392 393 1.457455 GCAGAGAGGAGGGAGAGGG 60.457 68.421 0.00 0.00 0.00 4.30
393 394 1.943730 GCAGAGAGGAGGGAGAGGGA 61.944 65.000 0.00 0.00 0.00 4.20
394 395 0.185901 CAGAGAGGAGGGAGAGGGAG 59.814 65.000 0.00 0.00 0.00 4.30
395 396 0.998945 AGAGAGGAGGGAGAGGGAGG 60.999 65.000 0.00 0.00 0.00 4.30
396 397 2.123033 GAGGAGGGAGAGGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
397 398 4.150454 AGGAGGGAGAGGGAGGCG 62.150 72.222 0.00 0.00 0.00 5.52
398 399 4.144727 GGAGGGAGAGGGAGGCGA 62.145 72.222 0.00 0.00 0.00 5.54
399 400 2.200092 GAGGGAGAGGGAGGCGAT 59.800 66.667 0.00 0.00 0.00 4.58
400 401 1.458588 GAGGGAGAGGGAGGCGATT 60.459 63.158 0.00 0.00 0.00 3.34
401 402 1.003573 AGGGAGAGGGAGGCGATTT 59.996 57.895 0.00 0.00 0.00 2.17
402 403 1.147153 GGGAGAGGGAGGCGATTTG 59.853 63.158 0.00 0.00 0.00 2.32
403 404 1.147153 GGAGAGGGAGGCGATTTGG 59.853 63.158 0.00 0.00 0.00 3.28
404 405 1.147153 GAGAGGGAGGCGATTTGGG 59.853 63.158 0.00 0.00 0.00 4.12
405 406 2.193248 GAGGGAGGCGATTTGGGG 59.807 66.667 0.00 0.00 0.00 4.96
406 407 3.420482 AGGGAGGCGATTTGGGGG 61.420 66.667 0.00 0.00 0.00 5.40
407 408 3.416880 GGGAGGCGATTTGGGGGA 61.417 66.667 0.00 0.00 0.00 4.81
408 409 2.680965 GGAGGCGATTTGGGGGAA 59.319 61.111 0.00 0.00 0.00 3.97
409 410 1.000145 GGAGGCGATTTGGGGGAAA 60.000 57.895 0.00 0.00 0.00 3.13
410 411 0.397114 GGAGGCGATTTGGGGGAAAT 60.397 55.000 0.00 0.00 36.94 2.17
411 412 0.746659 GAGGCGATTTGGGGGAAATG 59.253 55.000 0.00 0.00 34.18 2.32
412 413 0.687427 AGGCGATTTGGGGGAAATGG 60.687 55.000 0.00 0.00 34.18 3.16
413 414 1.685355 GGCGATTTGGGGGAAATGGG 61.685 60.000 0.00 0.00 34.18 4.00
414 415 1.685355 GCGATTTGGGGGAAATGGGG 61.685 60.000 0.00 0.00 34.18 4.96
415 416 0.325203 CGATTTGGGGGAAATGGGGT 60.325 55.000 0.00 0.00 34.18 4.95
416 417 1.203237 GATTTGGGGGAAATGGGGTG 58.797 55.000 0.00 0.00 34.18 4.61
417 418 0.796255 ATTTGGGGGAAATGGGGTGA 59.204 50.000 0.00 0.00 32.69 4.02
418 419 0.116143 TTTGGGGGAAATGGGGTGAG 59.884 55.000 0.00 0.00 0.00 3.51
419 420 2.042944 GGGGGAAATGGGGTGAGC 60.043 66.667 0.00 0.00 0.00 4.26
420 421 2.770130 GGGGAAATGGGGTGAGCA 59.230 61.111 0.00 0.00 0.00 4.26
421 422 1.078347 GGGGAAATGGGGTGAGCAA 59.922 57.895 0.00 0.00 0.00 3.91
422 423 0.325577 GGGGAAATGGGGTGAGCAAT 60.326 55.000 0.00 0.00 0.00 3.56
423 424 0.826062 GGGAAATGGGGTGAGCAATG 59.174 55.000 0.00 0.00 0.00 2.82
424 425 0.176449 GGAAATGGGGTGAGCAATGC 59.824 55.000 0.00 0.00 0.00 3.56
425 426 0.179129 GAAATGGGGTGAGCAATGCG 60.179 55.000 0.00 0.00 0.00 4.73
426 427 1.606885 AAATGGGGTGAGCAATGCGG 61.607 55.000 0.00 0.00 0.00 5.69
431 432 3.204827 GTGAGCAATGCGGCCGAT 61.205 61.111 33.48 16.99 0.00 4.18
432 433 3.204119 TGAGCAATGCGGCCGATG 61.204 61.111 33.48 24.28 0.00 3.84
433 434 4.619140 GAGCAATGCGGCCGATGC 62.619 66.667 33.48 32.10 39.06 3.91
444 445 4.547367 CCGATGCCCGTTCCCCTC 62.547 72.222 0.00 0.00 36.31 4.30
445 446 4.547367 CGATGCCCGTTCCCCTCC 62.547 72.222 0.00 0.00 0.00 4.30
446 447 3.090532 GATGCCCGTTCCCCTCCT 61.091 66.667 0.00 0.00 0.00 3.69
447 448 3.090532 ATGCCCGTTCCCCTCCTC 61.091 66.667 0.00 0.00 0.00 3.71
450 451 2.694305 CCCGTTCCCCTCCTCCTA 59.306 66.667 0.00 0.00 0.00 2.94
451 452 1.236282 CCCGTTCCCCTCCTCCTAT 59.764 63.158 0.00 0.00 0.00 2.57
452 453 0.485988 CCCGTTCCCCTCCTCCTATA 59.514 60.000 0.00 0.00 0.00 1.31
453 454 1.630223 CCGTTCCCCTCCTCCTATAC 58.370 60.000 0.00 0.00 0.00 1.47
454 455 1.147399 CCGTTCCCCTCCTCCTATACT 59.853 57.143 0.00 0.00 0.00 2.12
455 456 2.377869 CCGTTCCCCTCCTCCTATACTA 59.622 54.545 0.00 0.00 0.00 1.82
456 457 3.561744 CCGTTCCCCTCCTCCTATACTAG 60.562 56.522 0.00 0.00 0.00 2.57
458 459 2.657098 TCCCCTCCTCCTATACTAGGG 58.343 57.143 0.00 0.00 46.24 3.53
459 460 1.007359 CCCCTCCTCCTATACTAGGGC 59.993 61.905 0.00 0.00 44.79 5.19
460 461 1.007359 CCCTCCTCCTATACTAGGGCC 59.993 61.905 0.00 0.00 46.24 5.80
461 462 1.007359 CCTCCTCCTATACTAGGGCCC 59.993 61.905 16.46 16.46 46.24 5.80
462 463 2.004589 CTCCTCCTATACTAGGGCCCT 58.995 57.143 31.35 31.35 46.24 5.19
463 464 2.384029 CTCCTCCTATACTAGGGCCCTT 59.616 54.545 34.04 16.77 46.24 3.95
464 465 2.802002 TCCTCCTATACTAGGGCCCTTT 59.198 50.000 34.04 20.53 46.24 3.11
465 466 3.211465 TCCTCCTATACTAGGGCCCTTTT 59.789 47.826 34.04 20.12 46.24 2.27
466 467 3.981375 CCTCCTATACTAGGGCCCTTTTT 59.019 47.826 34.04 17.28 46.24 1.94
486 487 4.902443 TTTTGGAAACTATTCACGCACA 57.098 36.364 0.00 0.00 37.29 4.57
487 488 3.889196 TTGGAAACTATTCACGCACAC 57.111 42.857 0.00 0.00 37.29 3.82
488 489 1.795872 TGGAAACTATTCACGCACACG 59.204 47.619 0.00 0.00 37.29 4.49
512 513 2.359354 CGCATGACCGTGGGGAAA 60.359 61.111 0.00 0.00 36.97 3.13
513 514 2.686816 CGCATGACCGTGGGGAAAC 61.687 63.158 0.00 0.00 36.97 2.78
514 515 2.686816 GCATGACCGTGGGGAAACG 61.687 63.158 0.00 0.00 43.20 3.60
515 516 2.359478 ATGACCGTGGGGAAACGC 60.359 61.111 0.00 0.00 42.23 4.84
524 525 4.038080 GGGAAACGCAACCGCCAG 62.038 66.667 0.00 0.00 38.22 4.85
525 526 4.700365 GGAAACGCAACCGCCAGC 62.700 66.667 0.00 0.00 38.22 4.85
531 532 3.802507 GCAACCGCCAGCGTATAA 58.197 55.556 11.55 0.00 37.81 0.98
532 533 2.317230 GCAACCGCCAGCGTATAAT 58.683 52.632 11.55 0.00 37.81 1.28
533 534 1.504359 GCAACCGCCAGCGTATAATA 58.496 50.000 11.55 0.00 37.81 0.98
534 535 1.193874 GCAACCGCCAGCGTATAATAC 59.806 52.381 11.55 0.00 37.81 1.89
535 536 2.475818 CAACCGCCAGCGTATAATACA 58.524 47.619 11.55 0.00 37.81 2.29
536 537 2.144482 ACCGCCAGCGTATAATACAC 57.856 50.000 11.55 0.00 37.81 2.90
537 538 1.057636 CCGCCAGCGTATAATACACG 58.942 55.000 11.55 0.00 42.24 4.49
538 539 1.601162 CCGCCAGCGTATAATACACGT 60.601 52.381 11.55 0.00 41.41 4.49
539 540 1.450533 CGCCAGCGTATAATACACGTG 59.549 52.381 15.48 15.48 41.41 4.49
540 541 1.191647 GCCAGCGTATAATACACGTGC 59.808 52.381 17.22 0.00 41.41 5.34
541 542 2.465855 CCAGCGTATAATACACGTGCA 58.534 47.619 17.22 2.06 41.41 4.57
542 543 2.217847 CCAGCGTATAATACACGTGCAC 59.782 50.000 17.22 6.82 41.41 4.57
543 544 2.098068 CAGCGTATAATACACGTGCACG 60.098 50.000 35.99 35.99 46.33 5.34
544 545 1.395080 GCGTATAATACACGTGCACGC 60.395 52.381 37.35 22.72 45.07 5.34
545 546 1.188573 CGTATAATACACGTGCACGCC 59.811 52.381 37.35 13.40 44.43 5.68
546 547 1.523934 GTATAATACACGTGCACGCCC 59.476 52.381 37.35 11.76 44.43 6.13
547 548 1.149361 ATAATACACGTGCACGCCCG 61.149 55.000 37.35 27.19 44.43 6.13
562 563 1.868469 GCCCGGCGTACAATAATACA 58.132 50.000 6.01 0.00 0.00 2.29
563 564 1.528161 GCCCGGCGTACAATAATACAC 59.472 52.381 6.01 0.00 0.00 2.90
564 565 1.788308 CCCGGCGTACAATAATACACG 59.212 52.381 6.01 0.00 37.45 4.49
565 566 1.788308 CCGGCGTACAATAATACACGG 59.212 52.381 6.01 0.00 38.25 4.94
566 567 1.788308 CGGCGTACAATAATACACGGG 59.212 52.381 0.00 0.00 35.04 5.28
567 568 1.528161 GGCGTACAATAATACACGGGC 59.472 52.381 0.00 0.00 35.04 6.13
568 569 1.528161 GCGTACAATAATACACGGGCC 59.472 52.381 0.00 0.00 35.04 5.80
569 570 1.788308 CGTACAATAATACACGGGCCG 59.212 52.381 27.06 27.06 0.00 6.13
570 571 2.137523 GTACAATAATACACGGGCCGG 58.862 52.381 31.78 21.03 0.00 6.13
571 572 0.816421 ACAATAATACACGGGCCGGC 60.816 55.000 31.78 21.18 0.00 6.13
572 573 1.595929 AATAATACACGGGCCGGCG 60.596 57.895 31.78 22.82 0.00 6.46
573 574 4.895478 TAATACACGGGCCGGCGC 62.895 66.667 32.10 32.10 0.00 6.53
589 590 4.008933 GCGGGCTCATATCGGGCT 62.009 66.667 0.00 0.00 0.00 5.19
590 591 2.262915 CGGGCTCATATCGGGCTC 59.737 66.667 0.00 0.00 0.00 4.70
591 592 2.279069 CGGGCTCATATCGGGCTCT 61.279 63.158 0.00 0.00 0.00 4.09
592 593 0.965866 CGGGCTCATATCGGGCTCTA 60.966 60.000 0.00 0.00 0.00 2.43
593 594 0.533032 GGGCTCATATCGGGCTCTAC 59.467 60.000 0.00 0.00 0.00 2.59
594 595 0.171455 GGCTCATATCGGGCTCTACG 59.829 60.000 0.00 0.00 0.00 3.51
595 596 1.166129 GCTCATATCGGGCTCTACGA 58.834 55.000 0.00 0.00 45.19 3.43
596 597 1.135632 GCTCATATCGGGCTCTACGAC 60.136 57.143 0.00 0.00 43.78 4.34
597 598 2.428491 CTCATATCGGGCTCTACGACT 58.572 52.381 0.00 0.00 43.78 4.18
598 599 2.152016 TCATATCGGGCTCTACGACTG 58.848 52.381 0.00 0.00 43.78 3.51
599 600 1.200252 CATATCGGGCTCTACGACTGG 59.800 57.143 0.00 0.00 43.78 4.00
600 601 0.182061 TATCGGGCTCTACGACTGGT 59.818 55.000 0.00 0.00 43.78 4.00
601 602 1.102222 ATCGGGCTCTACGACTGGTC 61.102 60.000 0.00 0.00 43.78 4.02
602 603 1.749638 CGGGCTCTACGACTGGTCT 60.750 63.158 0.00 0.00 0.00 3.85
603 604 0.463295 CGGGCTCTACGACTGGTCTA 60.463 60.000 0.00 0.00 0.00 2.59
604 605 1.023502 GGGCTCTACGACTGGTCTAC 58.976 60.000 0.00 0.00 0.00 2.59
605 606 0.656785 GGCTCTACGACTGGTCTACG 59.343 60.000 0.00 0.00 0.00 3.51
606 607 0.027848 GCTCTACGACTGGTCTACGC 59.972 60.000 0.00 0.00 0.00 4.42
607 608 0.301088 CTCTACGACTGGTCTACGCG 59.699 60.000 3.53 3.53 0.00 6.01
608 609 1.297451 CTACGACTGGTCTACGCGC 60.297 63.158 5.73 0.00 0.00 6.86
609 610 2.944662 CTACGACTGGTCTACGCGCG 62.945 65.000 30.96 30.96 0.00 6.86
611 612 4.477975 GACTGGTCTACGCGCGCT 62.478 66.667 32.58 19.60 0.00 5.92
612 613 3.966026 GACTGGTCTACGCGCGCTT 62.966 63.158 32.58 23.63 0.00 4.68
613 614 2.809601 CTGGTCTACGCGCGCTTT 60.810 61.111 32.58 18.37 0.00 3.51
614 615 1.515519 CTGGTCTACGCGCGCTTTA 60.516 57.895 32.58 18.52 0.00 1.85
615 616 1.740043 CTGGTCTACGCGCGCTTTAC 61.740 60.000 32.58 21.84 0.00 2.01
616 617 1.802715 GGTCTACGCGCGCTTTACA 60.803 57.895 32.58 3.60 0.00 2.41
617 618 1.339466 GTCTACGCGCGCTTTACAC 59.661 57.895 32.58 14.19 0.00 2.90
618 619 1.802715 TCTACGCGCGCTTTACACC 60.803 57.895 32.58 0.00 0.00 4.16
619 620 2.795389 CTACGCGCGCTTTACACCC 61.795 63.158 32.58 0.00 0.00 4.61
620 621 3.570621 TACGCGCGCTTTACACCCA 62.571 57.895 32.58 0.00 0.00 4.51
621 622 4.439472 CGCGCGCTTTACACCCAC 62.439 66.667 30.48 0.00 0.00 4.61
622 623 4.097863 GCGCGCTTTACACCCACC 62.098 66.667 26.67 0.00 0.00 4.61
623 624 2.358247 CGCGCTTTACACCCACCT 60.358 61.111 5.56 0.00 0.00 4.00
624 625 2.677003 CGCGCTTTACACCCACCTG 61.677 63.158 5.56 0.00 0.00 4.00
625 626 1.302192 GCGCTTTACACCCACCTGA 60.302 57.895 0.00 0.00 0.00 3.86
626 627 0.887387 GCGCTTTACACCCACCTGAA 60.887 55.000 0.00 0.00 0.00 3.02
627 628 1.600023 CGCTTTACACCCACCTGAAA 58.400 50.000 0.00 0.00 0.00 2.69
628 629 2.159382 CGCTTTACACCCACCTGAAAT 58.841 47.619 0.00 0.00 0.00 2.17
629 630 2.095263 CGCTTTACACCCACCTGAAATG 60.095 50.000 0.00 0.00 0.00 2.32
630 631 3.153919 GCTTTACACCCACCTGAAATGA 58.846 45.455 0.00 0.00 0.00 2.57
631 632 3.057526 GCTTTACACCCACCTGAAATGAC 60.058 47.826 0.00 0.00 0.00 3.06
632 633 2.871096 TACACCCACCTGAAATGACC 57.129 50.000 0.00 0.00 0.00 4.02
633 634 0.850100 ACACCCACCTGAAATGACCA 59.150 50.000 0.00 0.00 0.00 4.02
634 635 1.428912 ACACCCACCTGAAATGACCAT 59.571 47.619 0.00 0.00 0.00 3.55
635 636 2.094675 CACCCACCTGAAATGACCATC 58.905 52.381 0.00 0.00 0.00 3.51
636 637 1.340017 ACCCACCTGAAATGACCATCG 60.340 52.381 0.00 0.00 0.00 3.84
637 638 1.340017 CCCACCTGAAATGACCATCGT 60.340 52.381 0.00 0.00 0.00 3.73
638 639 2.093181 CCCACCTGAAATGACCATCGTA 60.093 50.000 0.00 0.00 0.00 3.43
639 640 2.936498 CCACCTGAAATGACCATCGTAC 59.064 50.000 0.00 0.00 0.00 3.67
640 641 2.936498 CACCTGAAATGACCATCGTACC 59.064 50.000 0.00 0.00 0.00 3.34
641 642 2.093128 ACCTGAAATGACCATCGTACCC 60.093 50.000 0.00 0.00 0.00 3.69
642 643 2.561569 CTGAAATGACCATCGTACCCC 58.438 52.381 0.00 0.00 0.00 4.95
643 644 2.170607 CTGAAATGACCATCGTACCCCT 59.829 50.000 0.00 0.00 0.00 4.79
644 645 2.169769 TGAAATGACCATCGTACCCCTC 59.830 50.000 0.00 0.00 0.00 4.30
645 646 0.750850 AATGACCATCGTACCCCTCG 59.249 55.000 0.00 0.00 0.00 4.63
646 647 0.396695 ATGACCATCGTACCCCTCGT 60.397 55.000 0.00 0.00 0.00 4.18
647 648 0.612732 TGACCATCGTACCCCTCGTT 60.613 55.000 0.00 0.00 0.00 3.85
648 649 1.340893 TGACCATCGTACCCCTCGTTA 60.341 52.381 0.00 0.00 0.00 3.18
649 650 1.066152 GACCATCGTACCCCTCGTTAC 59.934 57.143 0.00 0.00 0.00 2.50
650 651 1.105457 CCATCGTACCCCTCGTTACA 58.895 55.000 0.00 0.00 0.00 2.41
651 652 1.477700 CCATCGTACCCCTCGTTACAA 59.522 52.381 0.00 0.00 0.00 2.41
652 653 2.094078 CCATCGTACCCCTCGTTACAAA 60.094 50.000 0.00 0.00 0.00 2.83
653 654 2.723124 TCGTACCCCTCGTTACAAAC 57.277 50.000 0.00 0.00 0.00 2.93
654 655 1.272212 TCGTACCCCTCGTTACAAACC 59.728 52.381 0.00 0.00 0.00 3.27
655 656 1.713597 GTACCCCTCGTTACAAACCG 58.286 55.000 0.00 0.00 0.00 4.44
656 657 0.037419 TACCCCTCGTTACAAACCGC 60.037 55.000 0.00 0.00 0.00 5.68
657 658 2.036571 CCCCTCGTTACAAACCGCC 61.037 63.158 0.00 0.00 0.00 6.13
658 659 1.301874 CCCTCGTTACAAACCGCCA 60.302 57.895 0.00 0.00 0.00 5.69
659 660 0.675522 CCCTCGTTACAAACCGCCAT 60.676 55.000 0.00 0.00 0.00 4.40
660 661 0.725117 CCTCGTTACAAACCGCCATC 59.275 55.000 0.00 0.00 0.00 3.51
661 662 0.368907 CTCGTTACAAACCGCCATCG 59.631 55.000 0.00 0.00 0.00 3.84
662 663 0.038435 TCGTTACAAACCGCCATCGA 60.038 50.000 0.00 0.00 38.10 3.59
663 664 0.094046 CGTTACAAACCGCCATCGAC 59.906 55.000 0.00 0.00 38.10 4.20
664 665 0.094046 GTTACAAACCGCCATCGACG 59.906 55.000 0.00 0.00 38.10 5.12
665 666 0.319727 TTACAAACCGCCATCGACGT 60.320 50.000 0.00 0.00 38.10 4.34
666 667 0.525311 TACAAACCGCCATCGACGTA 59.475 50.000 0.00 0.00 38.10 3.57
667 668 0.108520 ACAAACCGCCATCGACGTAT 60.109 50.000 0.00 0.00 38.10 3.06
668 669 0.575390 CAAACCGCCATCGACGTATC 59.425 55.000 0.00 0.00 38.10 2.24
669 670 0.458669 AAACCGCCATCGACGTATCT 59.541 50.000 0.00 0.00 38.10 1.98
670 671 0.248907 AACCGCCATCGACGTATCTG 60.249 55.000 0.00 0.00 38.10 2.90
671 672 1.099295 ACCGCCATCGACGTATCTGA 61.099 55.000 0.00 0.00 38.10 3.27
672 673 0.030235 CCGCCATCGACGTATCTGAA 59.970 55.000 0.00 0.00 38.10 3.02
673 674 1.121240 CGCCATCGACGTATCTGAAC 58.879 55.000 0.00 0.00 38.10 3.18
674 675 1.488527 GCCATCGACGTATCTGAACC 58.511 55.000 0.00 0.00 0.00 3.62
675 676 1.755161 CCATCGACGTATCTGAACCG 58.245 55.000 0.00 0.00 0.00 4.44
676 677 1.065102 CCATCGACGTATCTGAACCGT 59.935 52.381 4.91 4.91 37.56 4.83
677 678 2.479049 CCATCGACGTATCTGAACCGTT 60.479 50.000 6.46 0.00 34.51 4.44
678 679 2.532531 TCGACGTATCTGAACCGTTC 57.467 50.000 4.18 4.18 34.51 3.95
679 680 2.079158 TCGACGTATCTGAACCGTTCT 58.921 47.619 12.43 0.00 34.51 3.01
680 681 2.485426 TCGACGTATCTGAACCGTTCTT 59.515 45.455 12.43 0.92 34.51 2.52
681 682 2.592897 CGACGTATCTGAACCGTTCTTG 59.407 50.000 12.43 5.81 34.51 3.02
682 683 3.572584 GACGTATCTGAACCGTTCTTGT 58.427 45.455 12.43 2.47 34.51 3.16
683 684 3.314553 ACGTATCTGAACCGTTCTTGTG 58.685 45.455 12.43 1.39 0.00 3.33
684 685 3.243636 ACGTATCTGAACCGTTCTTGTGT 60.244 43.478 12.43 1.71 0.00 3.72
685 686 3.739300 CGTATCTGAACCGTTCTTGTGTT 59.261 43.478 12.43 0.00 0.00 3.32
686 687 4.210537 CGTATCTGAACCGTTCTTGTGTTT 59.789 41.667 12.43 0.00 0.00 2.83
687 688 5.277154 CGTATCTGAACCGTTCTTGTGTTTT 60.277 40.000 12.43 0.00 0.00 2.43
688 689 5.576447 ATCTGAACCGTTCTTGTGTTTTT 57.424 34.783 12.43 0.00 0.00 1.94
689 690 4.976987 TCTGAACCGTTCTTGTGTTTTTC 58.023 39.130 12.43 0.00 0.00 2.29
690 691 4.099380 TGAACCGTTCTTGTGTTTTTCC 57.901 40.909 12.43 0.00 0.00 3.13
691 692 3.119424 TGAACCGTTCTTGTGTTTTTCCC 60.119 43.478 12.43 0.00 0.00 3.97
692 693 2.448453 ACCGTTCTTGTGTTTTTCCCA 58.552 42.857 0.00 0.00 0.00 4.37
693 694 2.164827 ACCGTTCTTGTGTTTTTCCCAC 59.835 45.455 0.00 0.00 0.00 4.61
694 695 2.425668 CCGTTCTTGTGTTTTTCCCACT 59.574 45.455 0.00 0.00 33.92 4.00
695 696 3.434637 CGTTCTTGTGTTTTTCCCACTG 58.565 45.455 0.00 0.00 33.92 3.66
696 697 3.119637 CGTTCTTGTGTTTTTCCCACTGT 60.120 43.478 0.00 0.00 33.92 3.55
697 698 4.173256 GTTCTTGTGTTTTTCCCACTGTG 58.827 43.478 0.00 0.00 33.92 3.66
698 699 3.426615 TCTTGTGTTTTTCCCACTGTGT 58.573 40.909 7.08 0.00 33.92 3.72
699 700 3.829601 TCTTGTGTTTTTCCCACTGTGTT 59.170 39.130 7.08 0.00 33.92 3.32
700 701 4.282195 TCTTGTGTTTTTCCCACTGTGTTT 59.718 37.500 7.08 0.00 33.92 2.83
701 702 4.608948 TGTGTTTTTCCCACTGTGTTTT 57.391 36.364 7.08 0.00 33.92 2.43
702 703 4.962155 TGTGTTTTTCCCACTGTGTTTTT 58.038 34.783 7.08 0.00 33.92 1.94
703 704 4.991687 TGTGTTTTTCCCACTGTGTTTTTC 59.008 37.500 7.08 0.00 33.92 2.29
704 705 4.991687 GTGTTTTTCCCACTGTGTTTTTCA 59.008 37.500 7.08 0.00 0.00 2.69
705 706 5.120053 GTGTTTTTCCCACTGTGTTTTTCAG 59.880 40.000 7.08 0.00 38.68 3.02
706 707 4.464069 TTTTCCCACTGTGTTTTTCAGG 57.536 40.909 7.08 0.00 37.25 3.86
707 708 3.374042 TTCCCACTGTGTTTTTCAGGA 57.626 42.857 7.08 1.45 37.25 3.86
708 709 2.650322 TCCCACTGTGTTTTTCAGGAC 58.350 47.619 7.08 0.00 37.25 3.85
709 710 2.241176 TCCCACTGTGTTTTTCAGGACT 59.759 45.455 7.08 0.00 37.25 3.85
710 711 2.358898 CCCACTGTGTTTTTCAGGACTG 59.641 50.000 7.08 0.00 37.25 3.51
711 712 3.016736 CCACTGTGTTTTTCAGGACTGT 58.983 45.455 7.08 0.00 37.25 3.55
712 713 3.443681 CCACTGTGTTTTTCAGGACTGTT 59.556 43.478 7.08 0.00 37.25 3.16
713 714 4.414852 CACTGTGTTTTTCAGGACTGTTG 58.585 43.478 0.00 0.00 37.25 3.33
714 715 4.079253 ACTGTGTTTTTCAGGACTGTTGT 58.921 39.130 0.00 0.00 37.25 3.32
715 716 5.123186 CACTGTGTTTTTCAGGACTGTTGTA 59.877 40.000 0.00 0.00 37.25 2.41
716 717 5.708230 ACTGTGTTTTTCAGGACTGTTGTAA 59.292 36.000 0.00 0.00 37.25 2.41
717 718 5.945155 TGTGTTTTTCAGGACTGTTGTAAC 58.055 37.500 0.00 2.01 0.00 2.50
718 719 5.025826 GTGTTTTTCAGGACTGTTGTAACG 58.974 41.667 0.00 0.00 0.00 3.18
719 720 4.936411 TGTTTTTCAGGACTGTTGTAACGA 59.064 37.500 0.00 0.00 0.00 3.85
720 721 5.064198 TGTTTTTCAGGACTGTTGTAACGAG 59.936 40.000 0.00 0.00 0.00 4.18
721 722 4.395959 TTTCAGGACTGTTGTAACGAGT 57.604 40.909 0.00 0.00 0.00 4.18
722 723 4.395959 TTCAGGACTGTTGTAACGAGTT 57.604 40.909 0.00 0.00 0.00 3.01
723 724 3.973657 TCAGGACTGTTGTAACGAGTTC 58.026 45.455 0.00 0.00 0.00 3.01
724 725 3.635373 TCAGGACTGTTGTAACGAGTTCT 59.365 43.478 0.00 3.72 30.85 3.01
725 726 3.736252 CAGGACTGTTGTAACGAGTTCTG 59.264 47.826 15.03 15.03 37.34 3.02
726 727 3.635373 AGGACTGTTGTAACGAGTTCTGA 59.365 43.478 0.00 0.00 30.15 3.27
727 728 4.281182 AGGACTGTTGTAACGAGTTCTGAT 59.719 41.667 0.00 0.00 30.15 2.90
728 729 4.386049 GGACTGTTGTAACGAGTTCTGATG 59.614 45.833 0.00 0.00 0.00 3.07
729 730 5.196341 ACTGTTGTAACGAGTTCTGATGA 57.804 39.130 0.00 0.00 0.00 2.92
730 731 4.982916 ACTGTTGTAACGAGTTCTGATGAC 59.017 41.667 0.00 0.00 0.00 3.06
731 732 4.304110 TGTTGTAACGAGTTCTGATGACC 58.696 43.478 0.00 0.00 0.00 4.02
732 733 3.587797 TGTAACGAGTTCTGATGACCC 57.412 47.619 0.00 0.00 0.00 4.46
733 734 2.894765 TGTAACGAGTTCTGATGACCCA 59.105 45.455 0.00 0.00 0.00 4.51
734 735 2.457366 AACGAGTTCTGATGACCCAC 57.543 50.000 0.00 0.00 0.00 4.61
735 736 0.243907 ACGAGTTCTGATGACCCACG 59.756 55.000 0.00 0.00 0.00 4.94
755 756 3.445096 ACGCTGTAACTATTTACCTCCGT 59.555 43.478 0.98 4.39 37.39 4.69
756 757 4.082026 ACGCTGTAACTATTTACCTCCGTT 60.082 41.667 0.98 0.00 37.39 4.44
757 758 4.501921 CGCTGTAACTATTTACCTCCGTTC 59.498 45.833 0.98 0.00 37.39 3.95
758 759 4.501921 GCTGTAACTATTTACCTCCGTTCG 59.498 45.833 0.98 0.00 37.39 3.95
782 790 3.519913 AGTTCTTATGACCCACTCCCTTC 59.480 47.826 0.00 0.00 0.00 3.46
789 797 2.239400 GACCCACTCCCTTCCAAAAAG 58.761 52.381 0.00 0.00 0.00 2.27
897 920 1.410517 TCCTCGTCCGACTACGACTAT 59.589 52.381 3.93 0.00 46.29 2.12
983 1010 3.181471 GCTACAAGCTTCTCCTGCTGATA 60.181 47.826 0.00 0.00 41.03 2.15
1169 1208 3.256383 TCCAACTTCAAGTACGAATCGGA 59.744 43.478 7.80 0.00 0.00 4.55
1934 2030 1.661341 ACAATGCTGAGCCGAGAATC 58.339 50.000 0.23 0.00 0.00 2.52
1938 2034 1.299773 GCTGAGCCGAGAATCCGAG 60.300 63.158 0.00 0.00 0.00 4.63
1982 2081 1.084289 GACTTGCGTCCATGGTAACC 58.916 55.000 12.58 0.00 33.98 2.85
1983 2082 0.322187 ACTTGCGTCCATGGTAACCC 60.322 55.000 12.58 0.00 0.00 4.11
1984 2083 1.366111 CTTGCGTCCATGGTAACCCG 61.366 60.000 12.58 8.65 0.00 5.28
1985 2084 1.828461 TTGCGTCCATGGTAACCCGA 61.828 55.000 12.58 0.00 0.00 5.14
1996 2096 3.104512 TGGTAACCCGATCTGATCAAGT 58.895 45.455 17.19 10.44 0.00 3.16
2100 2200 4.017808 AGAGAGTACTAAACCAGCGACAT 58.982 43.478 0.00 0.00 0.00 3.06
2111 2211 2.747446 ACCAGCGACATTTAACATGGAC 59.253 45.455 0.00 0.00 0.00 4.02
2128 2228 3.341823 TGGACCGAAGAGAGTACTACAC 58.658 50.000 0.00 0.00 0.00 2.90
2133 2233 6.402456 ACCGAAGAGAGTACTACACTTTTT 57.598 37.500 0.00 0.00 37.72 1.94
2146 2322 6.655930 ACTACACTTTTTCCAGTAAAGTCCA 58.344 36.000 0.00 0.00 42.32 4.02
2162 2338 8.035984 AGTAAAGTCCAAAAATTTCCGTTTCAA 58.964 29.630 0.00 0.00 0.00 2.69
2165 2341 5.757808 AGTCCAAAAATTTCCGTTTCAATGG 59.242 36.000 0.00 0.00 36.38 3.16
2172 2348 3.889196 TTCCGTTTCAATGGAGTTTCG 57.111 42.857 0.79 0.00 44.46 3.46
2181 2377 5.934935 TCAATGGAGTTTCGTAGTTTTCC 57.065 39.130 0.00 0.00 0.00 3.13
2341 2567 3.519510 ACTTGCATCCTTTGGTAGCTCTA 59.480 43.478 0.00 0.00 0.00 2.43
2632 2969 5.914898 AAAATAGTAATGTTGCCCAGGAC 57.085 39.130 0.00 0.00 0.00 3.85
2633 2970 3.577805 ATAGTAATGTTGCCCAGGACC 57.422 47.619 0.00 0.00 0.00 4.46
2634 2971 0.331616 AGTAATGTTGCCCAGGACCC 59.668 55.000 0.00 0.00 0.00 4.46
2635 2972 0.039035 GTAATGTTGCCCAGGACCCA 59.961 55.000 0.00 0.00 0.00 4.51
2636 2973 0.331278 TAATGTTGCCCAGGACCCAG 59.669 55.000 0.00 0.00 0.00 4.45
2637 2974 2.445492 AATGTTGCCCAGGACCCAGG 62.445 60.000 0.00 0.00 0.00 4.45
2830 3188 1.441016 GCAGCCGAGCTTCAAAACG 60.441 57.895 0.00 0.00 36.40 3.60
2880 3238 6.879458 GCATCCGGGAAAATATCTAGTGTTAT 59.121 38.462 0.00 0.00 0.00 1.89
2881 3239 7.390718 GCATCCGGGAAAATATCTAGTGTTATT 59.609 37.037 0.00 0.00 0.00 1.40
2882 3240 9.938280 CATCCGGGAAAATATCTAGTGTTATTA 57.062 33.333 0.00 0.00 0.00 0.98
2883 3241 9.939802 ATCCGGGAAAATATCTAGTGTTATTAC 57.060 33.333 0.00 0.00 0.00 1.89
2884 3242 9.151177 TCCGGGAAAATATCTAGTGTTATTACT 57.849 33.333 0.00 0.00 34.71 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 118 4.615815 GCGGCGGCAGATCTGGAT 62.616 66.667 23.89 0.00 39.62 3.41
213 214 1.227176 GAAGACGGGTGCGGATACC 60.227 63.158 0.00 0.00 40.10 2.73
214 215 0.527817 CAGAAGACGGGTGCGGATAC 60.528 60.000 0.00 0.00 0.00 2.24
215 216 1.813859 CAGAAGACGGGTGCGGATA 59.186 57.895 0.00 0.00 0.00 2.59
216 217 2.579201 CAGAAGACGGGTGCGGAT 59.421 61.111 0.00 0.00 0.00 4.18
217 218 4.373116 GCAGAAGACGGGTGCGGA 62.373 66.667 0.00 0.00 0.00 5.54
218 219 4.680237 TGCAGAAGACGGGTGCGG 62.680 66.667 0.00 0.00 40.23 5.69
219 220 2.842394 ATCTGCAGAAGACGGGTGCG 62.842 60.000 22.50 0.00 40.23 5.34
220 221 1.078848 ATCTGCAGAAGACGGGTGC 60.079 57.895 22.50 0.00 37.88 5.01
221 222 0.534412 AGATCTGCAGAAGACGGGTG 59.466 55.000 22.50 0.00 37.88 4.61
222 223 0.820871 GAGATCTGCAGAAGACGGGT 59.179 55.000 22.50 1.08 37.88 5.28
223 224 0.103937 GGAGATCTGCAGAAGACGGG 59.896 60.000 22.50 0.00 37.88 5.28
224 225 0.248825 CGGAGATCTGCAGAAGACGG 60.249 60.000 22.50 14.11 37.88 4.79
225 226 0.453793 ACGGAGATCTGCAGAAGACG 59.546 55.000 22.50 22.83 37.88 4.18
226 227 1.202359 GGACGGAGATCTGCAGAAGAC 60.202 57.143 22.50 14.86 37.88 3.01
227 228 1.107114 GGACGGAGATCTGCAGAAGA 58.893 55.000 22.50 0.00 39.94 2.87
228 229 0.248825 CGGACGGAGATCTGCAGAAG 60.249 60.000 22.50 12.09 0.00 2.85
229 230 1.809869 CGGACGGAGATCTGCAGAA 59.190 57.895 22.50 4.23 0.00 3.02
230 231 3.514417 CGGACGGAGATCTGCAGA 58.486 61.111 20.79 20.79 0.00 4.26
233 234 3.889044 TCGCGGACGGAGATCTGC 61.889 66.667 6.13 0.48 45.91 4.26
234 235 2.024871 GTCGCGGACGGAGATCTG 59.975 66.667 6.13 0.00 40.63 2.90
235 236 2.437895 TGTCGCGGACGGAGATCT 60.438 61.111 6.13 0.00 40.63 2.75
236 237 2.024871 CTGTCGCGGACGGAGATC 59.975 66.667 6.13 0.00 41.05 2.75
237 238 4.194720 GCTGTCGCGGACGGAGAT 62.195 66.667 17.85 0.00 41.05 2.75
257 258 4.729918 AGCAAGGCCCTGGCGAAG 62.730 66.667 3.97 0.00 43.06 3.79
258 259 4.722700 GAGCAAGGCCCTGGCGAA 62.723 66.667 3.97 0.00 43.06 4.70
261 262 4.453892 ATGGAGCAAGGCCCTGGC 62.454 66.667 0.24 0.24 41.06 4.85
262 263 2.123982 GATGGAGCAAGGCCCTGG 60.124 66.667 2.89 0.00 0.00 4.45
263 264 2.123982 GGATGGAGCAAGGCCCTG 60.124 66.667 0.00 0.00 0.00 4.45
264 265 3.801997 CGGATGGAGCAAGGCCCT 61.802 66.667 0.00 0.00 0.00 5.19
265 266 3.764160 CTCGGATGGAGCAAGGCCC 62.764 68.421 0.00 0.00 35.63 5.80
266 267 2.203126 CTCGGATGGAGCAAGGCC 60.203 66.667 0.00 0.00 35.63 5.19
273 274 1.227497 GCTTCTGGCTCGGATGGAG 60.227 63.158 0.00 0.00 46.06 3.86
274 275 1.552799 TTGCTTCTGGCTCGGATGGA 61.553 55.000 0.00 0.00 42.39 3.41
275 276 1.078214 TTGCTTCTGGCTCGGATGG 60.078 57.895 0.00 0.00 42.39 3.51
276 277 1.712977 GCTTGCTTCTGGCTCGGATG 61.713 60.000 0.00 0.00 42.39 3.51
277 278 1.451028 GCTTGCTTCTGGCTCGGAT 60.451 57.895 0.00 0.00 42.39 4.18
278 279 2.046892 GCTTGCTTCTGGCTCGGA 60.047 61.111 0.00 0.00 42.39 4.55
279 280 2.359107 TGCTTGCTTCTGGCTCGG 60.359 61.111 0.00 0.00 42.39 4.63
280 281 2.396955 CCTGCTTGCTTCTGGCTCG 61.397 63.158 0.00 0.00 42.39 5.03
281 282 1.002868 TCCTGCTTGCTTCTGGCTC 60.003 57.895 0.00 0.00 42.39 4.70
282 283 1.002379 CTCCTGCTTGCTTCTGGCT 60.002 57.895 0.00 0.00 42.39 4.75
283 284 0.607489 TTCTCCTGCTTGCTTCTGGC 60.607 55.000 0.00 0.00 42.22 4.85
284 285 1.002888 TCTTCTCCTGCTTGCTTCTGG 59.997 52.381 0.00 0.00 0.00 3.86
285 286 2.028294 TCTCTTCTCCTGCTTGCTTCTG 60.028 50.000 0.00 0.00 0.00 3.02
286 287 2.234414 CTCTCTTCTCCTGCTTGCTTCT 59.766 50.000 0.00 0.00 0.00 2.85
287 288 2.620242 CTCTCTTCTCCTGCTTGCTTC 58.380 52.381 0.00 0.00 0.00 3.86
288 289 1.278699 CCTCTCTTCTCCTGCTTGCTT 59.721 52.381 0.00 0.00 0.00 3.91
289 290 0.903942 CCTCTCTTCTCCTGCTTGCT 59.096 55.000 0.00 0.00 0.00 3.91
290 291 0.107752 CCCTCTCTTCTCCTGCTTGC 60.108 60.000 0.00 0.00 0.00 4.01
291 292 1.481772 CTCCCTCTCTTCTCCTGCTTG 59.518 57.143 0.00 0.00 0.00 4.01
292 293 1.622173 CCTCCCTCTCTTCTCCTGCTT 60.622 57.143 0.00 0.00 0.00 3.91
293 294 0.032217 CCTCCCTCTCTTCTCCTGCT 60.032 60.000 0.00 0.00 0.00 4.24
294 295 1.685355 GCCTCCCTCTCTTCTCCTGC 61.685 65.000 0.00 0.00 0.00 4.85
295 296 1.391157 CGCCTCCCTCTCTTCTCCTG 61.391 65.000 0.00 0.00 0.00 3.86
296 297 1.076339 CGCCTCCCTCTCTTCTCCT 60.076 63.158 0.00 0.00 0.00 3.69
297 298 2.131067 CCGCCTCCCTCTCTTCTCC 61.131 68.421 0.00 0.00 0.00 3.71
298 299 2.791868 GCCGCCTCCCTCTCTTCTC 61.792 68.421 0.00 0.00 0.00 2.87
299 300 2.762043 GCCGCCTCCCTCTCTTCT 60.762 66.667 0.00 0.00 0.00 2.85
300 301 4.214327 CGCCGCCTCCCTCTCTTC 62.214 72.222 0.00 0.00 0.00 2.87
314 315 3.883744 CTCACCAGTCACCACCGCC 62.884 68.421 0.00 0.00 0.00 6.13
315 316 2.357517 CTCACCAGTCACCACCGC 60.358 66.667 0.00 0.00 0.00 5.68
316 317 2.357517 GCTCACCAGTCACCACCG 60.358 66.667 0.00 0.00 0.00 4.94
317 318 2.357517 CGCTCACCAGTCACCACC 60.358 66.667 0.00 0.00 0.00 4.61
318 319 1.373497 CTCGCTCACCAGTCACCAC 60.373 63.158 0.00 0.00 0.00 4.16
319 320 3.051210 CTCGCTCACCAGTCACCA 58.949 61.111 0.00 0.00 0.00 4.17
320 321 2.433318 GCTCGCTCACCAGTCACC 60.433 66.667 0.00 0.00 0.00 4.02
321 322 1.735920 CTGCTCGCTCACCAGTCAC 60.736 63.158 0.00 0.00 0.00 3.67
322 323 2.653115 CTGCTCGCTCACCAGTCA 59.347 61.111 0.00 0.00 0.00 3.41
323 324 2.125753 CCTGCTCGCTCACCAGTC 60.126 66.667 0.00 0.00 0.00 3.51
324 325 2.919856 ACCTGCTCGCTCACCAGT 60.920 61.111 0.00 0.00 0.00 4.00
325 326 2.433838 CACCTGCTCGCTCACCAG 60.434 66.667 0.00 0.00 0.00 4.00
326 327 4.007644 CCACCTGCTCGCTCACCA 62.008 66.667 0.00 0.00 0.00 4.17
327 328 4.767255 CCCACCTGCTCGCTCACC 62.767 72.222 0.00 0.00 0.00 4.02
328 329 4.767255 CCCCACCTGCTCGCTCAC 62.767 72.222 0.00 0.00 0.00 3.51
330 331 4.767255 CACCCCACCTGCTCGCTC 62.767 72.222 0.00 0.00 0.00 5.03
345 346 4.083862 GTCTCCCTCACCGGCCAC 62.084 72.222 0.00 0.00 0.00 5.01
349 350 3.760035 CACCGTCTCCCTCACCGG 61.760 72.222 0.00 0.00 45.72 5.28
350 351 2.675423 TCACCGTCTCCCTCACCG 60.675 66.667 0.00 0.00 0.00 4.94
351 352 2.352032 CCTCACCGTCTCCCTCACC 61.352 68.421 0.00 0.00 0.00 4.02
352 353 0.323178 TACCTCACCGTCTCCCTCAC 60.323 60.000 0.00 0.00 0.00 3.51
353 354 0.034380 CTACCTCACCGTCTCCCTCA 60.034 60.000 0.00 0.00 0.00 3.86
354 355 0.255318 TCTACCTCACCGTCTCCCTC 59.745 60.000 0.00 0.00 0.00 4.30
355 356 0.256464 CTCTACCTCACCGTCTCCCT 59.744 60.000 0.00 0.00 0.00 4.20
356 357 1.385756 GCTCTACCTCACCGTCTCCC 61.386 65.000 0.00 0.00 0.00 4.30
357 358 0.680280 TGCTCTACCTCACCGTCTCC 60.680 60.000 0.00 0.00 0.00 3.71
358 359 0.736053 CTGCTCTACCTCACCGTCTC 59.264 60.000 0.00 0.00 0.00 3.36
359 360 0.328592 TCTGCTCTACCTCACCGTCT 59.671 55.000 0.00 0.00 0.00 4.18
360 361 0.736053 CTCTGCTCTACCTCACCGTC 59.264 60.000 0.00 0.00 0.00 4.79
361 362 0.328592 TCTCTGCTCTACCTCACCGT 59.671 55.000 0.00 0.00 0.00 4.83
362 363 1.021202 CTCTCTGCTCTACCTCACCG 58.979 60.000 0.00 0.00 0.00 4.94
363 364 1.064314 TCCTCTCTGCTCTACCTCACC 60.064 57.143 0.00 0.00 0.00 4.02
364 365 2.297701 CTCCTCTCTGCTCTACCTCAC 58.702 57.143 0.00 0.00 0.00 3.51
365 366 1.214175 CCTCCTCTCTGCTCTACCTCA 59.786 57.143 0.00 0.00 0.00 3.86
366 367 1.478654 CCCTCCTCTCTGCTCTACCTC 60.479 61.905 0.00 0.00 0.00 3.85
367 368 0.555769 CCCTCCTCTCTGCTCTACCT 59.444 60.000 0.00 0.00 0.00 3.08
368 369 0.553819 TCCCTCCTCTCTGCTCTACC 59.446 60.000 0.00 0.00 0.00 3.18
369 370 1.493022 TCTCCCTCCTCTCTGCTCTAC 59.507 57.143 0.00 0.00 0.00 2.59
370 371 1.774254 CTCTCCCTCCTCTCTGCTCTA 59.226 57.143 0.00 0.00 0.00 2.43
371 372 0.552848 CTCTCCCTCCTCTCTGCTCT 59.447 60.000 0.00 0.00 0.00 4.09
372 373 0.468029 CCTCTCCCTCCTCTCTGCTC 60.468 65.000 0.00 0.00 0.00 4.26
373 374 1.620259 CCTCTCCCTCCTCTCTGCT 59.380 63.158 0.00 0.00 0.00 4.24
374 375 1.457455 CCCTCTCCCTCCTCTCTGC 60.457 68.421 0.00 0.00 0.00 4.26
375 376 0.185901 CTCCCTCTCCCTCCTCTCTG 59.814 65.000 0.00 0.00 0.00 3.35
376 377 0.998945 CCTCCCTCTCCCTCCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
377 378 1.541672 CCTCCCTCTCCCTCCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
378 379 2.710826 GCCTCCCTCTCCCTCCTCT 61.711 68.421 0.00 0.00 0.00 3.69
379 380 2.123033 GCCTCCCTCTCCCTCCTC 60.123 72.222 0.00 0.00 0.00 3.71
380 381 4.150454 CGCCTCCCTCTCCCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
381 382 2.956077 AATCGCCTCCCTCTCCCTCC 62.956 65.000 0.00 0.00 0.00 4.30
382 383 1.051556 AAATCGCCTCCCTCTCCCTC 61.052 60.000 0.00 0.00 0.00 4.30
383 384 1.003573 AAATCGCCTCCCTCTCCCT 59.996 57.895 0.00 0.00 0.00 4.20
384 385 1.147153 CAAATCGCCTCCCTCTCCC 59.853 63.158 0.00 0.00 0.00 4.30
385 386 1.147153 CCAAATCGCCTCCCTCTCC 59.853 63.158 0.00 0.00 0.00 3.71
386 387 1.147153 CCCAAATCGCCTCCCTCTC 59.853 63.158 0.00 0.00 0.00 3.20
387 388 2.378634 CCCCAAATCGCCTCCCTCT 61.379 63.158 0.00 0.00 0.00 3.69
388 389 2.193248 CCCCAAATCGCCTCCCTC 59.807 66.667 0.00 0.00 0.00 4.30
389 390 3.420482 CCCCCAAATCGCCTCCCT 61.420 66.667 0.00 0.00 0.00 4.20
390 391 2.508407 TTTCCCCCAAATCGCCTCCC 62.508 60.000 0.00 0.00 0.00 4.30
391 392 0.397114 ATTTCCCCCAAATCGCCTCC 60.397 55.000 0.00 0.00 27.18 4.30
392 393 0.746659 CATTTCCCCCAAATCGCCTC 59.253 55.000 0.00 0.00 31.79 4.70
393 394 0.687427 CCATTTCCCCCAAATCGCCT 60.687 55.000 0.00 0.00 31.79 5.52
394 395 1.685355 CCCATTTCCCCCAAATCGCC 61.685 60.000 0.00 0.00 31.79 5.54
395 396 1.685355 CCCCATTTCCCCCAAATCGC 61.685 60.000 0.00 0.00 31.79 4.58
396 397 0.325203 ACCCCATTTCCCCCAAATCG 60.325 55.000 0.00 0.00 31.79 3.34
397 398 1.203237 CACCCCATTTCCCCCAAATC 58.797 55.000 0.00 0.00 31.79 2.17
398 399 0.796255 TCACCCCATTTCCCCCAAAT 59.204 50.000 0.00 0.00 34.79 2.32
399 400 0.116143 CTCACCCCATTTCCCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
400 401 1.780327 CTCACCCCATTTCCCCCAA 59.220 57.895 0.00 0.00 0.00 4.12
401 402 2.929964 GCTCACCCCATTTCCCCCA 61.930 63.158 0.00 0.00 0.00 4.96
402 403 2.042944 GCTCACCCCATTTCCCCC 60.043 66.667 0.00 0.00 0.00 5.40
403 404 0.325577 ATTGCTCACCCCATTTCCCC 60.326 55.000 0.00 0.00 0.00 4.81
404 405 0.826062 CATTGCTCACCCCATTTCCC 59.174 55.000 0.00 0.00 0.00 3.97
405 406 0.176449 GCATTGCTCACCCCATTTCC 59.824 55.000 0.16 0.00 0.00 3.13
406 407 0.179129 CGCATTGCTCACCCCATTTC 60.179 55.000 7.12 0.00 0.00 2.17
407 408 1.606885 CCGCATTGCTCACCCCATTT 61.607 55.000 7.12 0.00 0.00 2.32
408 409 2.053865 CCGCATTGCTCACCCCATT 61.054 57.895 7.12 0.00 0.00 3.16
409 410 2.440796 CCGCATTGCTCACCCCAT 60.441 61.111 7.12 0.00 0.00 4.00
414 415 3.204827 ATCGGCCGCATTGCTCAC 61.205 61.111 23.51 0.00 0.00 3.51
415 416 3.204119 CATCGGCCGCATTGCTCA 61.204 61.111 23.51 0.00 0.00 4.26
416 417 4.619140 GCATCGGCCGCATTGCTC 62.619 66.667 28.75 10.74 32.41 4.26
427 428 4.547367 GAGGGGAACGGGCATCGG 62.547 72.222 3.86 0.00 44.45 4.18
428 429 4.547367 GGAGGGGAACGGGCATCG 62.547 72.222 0.00 0.00 45.88 3.84
429 430 3.090532 AGGAGGGGAACGGGCATC 61.091 66.667 0.00 0.00 0.00 3.91
430 431 3.090532 GAGGAGGGGAACGGGCAT 61.091 66.667 0.00 0.00 0.00 4.40
432 433 2.967063 ATAGGAGGAGGGGAACGGGC 62.967 65.000 0.00 0.00 0.00 6.13
433 434 0.485988 TATAGGAGGAGGGGAACGGG 59.514 60.000 0.00 0.00 0.00 5.28
434 435 1.147399 AGTATAGGAGGAGGGGAACGG 59.853 57.143 0.00 0.00 0.00 4.44
435 436 2.679429 AGTATAGGAGGAGGGGAACG 57.321 55.000 0.00 0.00 0.00 3.95
464 465 5.038033 GTGTGCGTGAATAGTTTCCAAAAA 58.962 37.500 0.00 0.00 0.00 1.94
465 466 4.602995 GTGTGCGTGAATAGTTTCCAAAA 58.397 39.130 0.00 0.00 0.00 2.44
466 467 3.303461 CGTGTGCGTGAATAGTTTCCAAA 60.303 43.478 0.00 0.00 0.00 3.28
467 468 2.222213 CGTGTGCGTGAATAGTTTCCAA 59.778 45.455 0.00 0.00 0.00 3.53
468 469 1.795872 CGTGTGCGTGAATAGTTTCCA 59.204 47.619 0.00 0.00 0.00 3.53
469 470 2.503943 CGTGTGCGTGAATAGTTTCC 57.496 50.000 0.00 0.00 0.00 3.13
495 496 2.359354 TTTCCCCACGGTCATGCG 60.359 61.111 0.00 0.00 0.00 4.73
496 497 2.686816 CGTTTCCCCACGGTCATGC 61.687 63.158 0.00 0.00 36.47 4.06
497 498 2.686816 GCGTTTCCCCACGGTCATG 61.687 63.158 0.00 0.00 40.69 3.07
498 499 2.359478 GCGTTTCCCCACGGTCAT 60.359 61.111 0.00 0.00 40.69 3.06
499 500 3.402095 TTGCGTTTCCCCACGGTCA 62.402 57.895 0.00 0.00 40.69 4.02
500 501 2.592287 TTGCGTTTCCCCACGGTC 60.592 61.111 0.00 0.00 40.69 4.79
501 502 2.903350 GTTGCGTTTCCCCACGGT 60.903 61.111 0.00 0.00 40.69 4.83
502 503 3.666253 GGTTGCGTTTCCCCACGG 61.666 66.667 0.00 0.00 40.69 4.94
503 504 4.020378 CGGTTGCGTTTCCCCACG 62.020 66.667 0.00 0.00 43.36 4.94
504 505 4.337060 GCGGTTGCGTTTCCCCAC 62.337 66.667 0.00 0.00 0.00 4.61
507 508 4.038080 CTGGCGGTTGCGTTTCCC 62.038 66.667 0.00 0.00 44.10 3.97
508 509 4.700365 GCTGGCGGTTGCGTTTCC 62.700 66.667 0.00 0.00 44.10 3.13
514 515 1.193874 GTATTATACGCTGGCGGTTGC 59.806 52.381 18.99 0.00 44.69 4.17
515 516 2.220133 GTGTATTATACGCTGGCGGTTG 59.780 50.000 18.99 0.00 44.69 3.77
516 517 2.476821 GTGTATTATACGCTGGCGGTT 58.523 47.619 18.99 8.31 44.69 4.44
517 518 1.601162 CGTGTATTATACGCTGGCGGT 60.601 52.381 18.99 9.69 44.69 5.68
518 519 1.057636 CGTGTATTATACGCTGGCGG 58.942 55.000 18.99 0.00 44.69 6.13
519 520 1.450533 CACGTGTATTATACGCTGGCG 59.549 52.381 13.56 13.56 44.87 5.69
520 521 1.191647 GCACGTGTATTATACGCTGGC 59.808 52.381 18.38 11.94 44.87 4.85
521 522 2.217847 GTGCACGTGTATTATACGCTGG 59.782 50.000 18.38 6.79 44.87 4.85
522 523 2.098068 CGTGCACGTGTATTATACGCTG 60.098 50.000 30.50 11.01 44.87 5.18
523 524 2.114056 CGTGCACGTGTATTATACGCT 58.886 47.619 30.50 0.00 44.87 5.07
524 525 1.395080 GCGTGCACGTGTATTATACGC 60.395 52.381 36.80 24.07 46.40 4.42
525 526 1.188573 GGCGTGCACGTGTATTATACG 59.811 52.381 36.80 17.35 46.31 3.06
526 527 1.523934 GGGCGTGCACGTGTATTATAC 59.476 52.381 36.80 18.55 42.22 1.47
527 528 1.855513 GGGCGTGCACGTGTATTATA 58.144 50.000 36.80 0.00 42.22 0.98
528 529 1.149361 CGGGCGTGCACGTGTATTAT 61.149 55.000 36.80 0.00 42.22 1.28
529 530 1.806351 CGGGCGTGCACGTGTATTA 60.806 57.895 36.80 0.00 42.22 0.98
530 531 3.115892 CGGGCGTGCACGTGTATT 61.116 61.111 36.80 0.00 42.22 1.89
543 544 1.528161 GTGTATTATTGTACGCCGGGC 59.472 52.381 9.54 9.54 0.00 6.13
544 545 1.788308 CGTGTATTATTGTACGCCGGG 59.212 52.381 2.18 0.00 32.76 5.73
545 546 1.788308 CCGTGTATTATTGTACGCCGG 59.212 52.381 0.00 0.00 36.24 6.13
546 547 1.788308 CCCGTGTATTATTGTACGCCG 59.212 52.381 0.00 0.00 35.39 6.46
547 548 1.528161 GCCCGTGTATTATTGTACGCC 59.472 52.381 0.00 0.00 35.39 5.68
548 549 1.528161 GGCCCGTGTATTATTGTACGC 59.472 52.381 0.00 0.00 35.39 4.42
549 550 1.788308 CGGCCCGTGTATTATTGTACG 59.212 52.381 0.00 0.00 36.39 3.67
550 551 2.137523 CCGGCCCGTGTATTATTGTAC 58.862 52.381 0.85 0.00 0.00 2.90
551 552 1.540797 GCCGGCCCGTGTATTATTGTA 60.541 52.381 18.11 0.00 0.00 2.41
552 553 0.816421 GCCGGCCCGTGTATTATTGT 60.816 55.000 18.11 0.00 0.00 2.71
553 554 1.837538 CGCCGGCCCGTGTATTATTG 61.838 60.000 23.46 0.00 0.00 1.90
554 555 1.595929 CGCCGGCCCGTGTATTATT 60.596 57.895 23.46 0.00 0.00 1.40
555 556 2.029964 CGCCGGCCCGTGTATTAT 59.970 61.111 23.46 0.00 0.00 1.28
556 557 4.895478 GCGCCGGCCCGTGTATTA 62.895 66.667 23.46 0.00 0.00 0.98
572 573 3.941657 GAGCCCGATATGAGCCCGC 62.942 68.421 0.00 0.00 0.00 6.13
573 574 0.965866 TAGAGCCCGATATGAGCCCG 60.966 60.000 0.00 0.00 0.00 6.13
574 575 0.533032 GTAGAGCCCGATATGAGCCC 59.467 60.000 0.00 0.00 0.00 5.19
575 576 0.171455 CGTAGAGCCCGATATGAGCC 59.829 60.000 0.00 0.00 0.00 4.70
576 577 1.135632 GTCGTAGAGCCCGATATGAGC 60.136 57.143 0.00 0.00 36.95 4.26
577 578 2.160615 CAGTCGTAGAGCCCGATATGAG 59.839 54.545 0.00 0.00 36.95 2.90
578 579 2.152016 CAGTCGTAGAGCCCGATATGA 58.848 52.381 0.00 0.00 36.95 2.15
579 580 1.200252 CCAGTCGTAGAGCCCGATATG 59.800 57.143 0.00 0.00 36.95 1.78
580 581 1.202903 ACCAGTCGTAGAGCCCGATAT 60.203 52.381 0.00 0.00 36.95 1.63
581 582 0.182061 ACCAGTCGTAGAGCCCGATA 59.818 55.000 0.00 0.00 36.95 2.92
582 583 1.076923 ACCAGTCGTAGAGCCCGAT 60.077 57.895 0.00 0.00 36.95 4.18
583 584 1.748122 GACCAGTCGTAGAGCCCGA 60.748 63.158 0.00 0.00 36.95 5.14
584 585 0.463295 TAGACCAGTCGTAGAGCCCG 60.463 60.000 0.00 0.00 36.95 6.13
585 586 1.023502 GTAGACCAGTCGTAGAGCCC 58.976 60.000 0.00 0.00 36.95 5.19
586 587 0.656785 CGTAGACCAGTCGTAGAGCC 59.343 60.000 0.00 0.00 36.95 4.70
587 588 0.027848 GCGTAGACCAGTCGTAGAGC 59.972 60.000 0.00 0.00 36.95 4.09
588 589 0.301088 CGCGTAGACCAGTCGTAGAG 59.699 60.000 0.00 0.00 36.95 2.43
589 590 1.699656 GCGCGTAGACCAGTCGTAGA 61.700 60.000 8.43 0.00 34.09 2.59
590 591 1.297451 GCGCGTAGACCAGTCGTAG 60.297 63.158 8.43 0.00 34.09 3.51
591 592 2.787249 GCGCGTAGACCAGTCGTA 59.213 61.111 8.43 0.00 34.09 3.43
592 593 4.456253 CGCGCGTAGACCAGTCGT 62.456 66.667 24.19 0.00 34.09 4.34
594 595 3.966026 AAGCGCGCGTAGACCAGTC 62.966 63.158 32.35 11.09 0.00 3.51
595 596 2.203972 TAAAGCGCGCGTAGACCAGT 62.204 55.000 32.35 7.99 0.00 4.00
596 597 1.515519 TAAAGCGCGCGTAGACCAG 60.516 57.895 32.35 0.04 0.00 4.00
597 598 1.802715 GTAAAGCGCGCGTAGACCA 60.803 57.895 32.35 9.26 0.00 4.02
598 599 1.802715 TGTAAAGCGCGCGTAGACC 60.803 57.895 32.35 14.36 0.00 3.85
599 600 1.339466 GTGTAAAGCGCGCGTAGAC 59.661 57.895 32.35 24.36 0.00 2.59
600 601 1.802715 GGTGTAAAGCGCGCGTAGA 60.803 57.895 32.35 17.53 0.00 2.59
601 602 2.693285 GGTGTAAAGCGCGCGTAG 59.307 61.111 32.35 3.57 0.00 3.51
602 603 2.810458 GGGTGTAAAGCGCGCGTA 60.810 61.111 32.35 19.23 0.00 4.42
603 604 4.973055 TGGGTGTAAAGCGCGCGT 62.973 61.111 32.35 21.73 42.57 6.01
604 605 4.439472 GTGGGTGTAAAGCGCGCG 62.439 66.667 28.44 28.44 42.57 6.86
605 606 4.097863 GGTGGGTGTAAAGCGCGC 62.098 66.667 26.66 26.66 40.43 6.86
606 607 2.358247 AGGTGGGTGTAAAGCGCG 60.358 61.111 0.00 0.00 0.00 6.86
607 608 0.887387 TTCAGGTGGGTGTAAAGCGC 60.887 55.000 0.00 0.00 0.00 5.92
608 609 1.600023 TTTCAGGTGGGTGTAAAGCG 58.400 50.000 0.00 0.00 0.00 4.68
609 610 3.057526 GTCATTTCAGGTGGGTGTAAAGC 60.058 47.826 0.00 0.00 0.00 3.51
610 611 3.506067 GGTCATTTCAGGTGGGTGTAAAG 59.494 47.826 0.00 0.00 0.00 1.85
611 612 3.117474 TGGTCATTTCAGGTGGGTGTAAA 60.117 43.478 0.00 0.00 0.00 2.01
612 613 2.443632 TGGTCATTTCAGGTGGGTGTAA 59.556 45.455 0.00 0.00 0.00 2.41
613 614 2.058705 TGGTCATTTCAGGTGGGTGTA 58.941 47.619 0.00 0.00 0.00 2.90
614 615 0.850100 TGGTCATTTCAGGTGGGTGT 59.150 50.000 0.00 0.00 0.00 4.16
615 616 2.094675 GATGGTCATTTCAGGTGGGTG 58.905 52.381 0.00 0.00 0.00 4.61
616 617 1.340017 CGATGGTCATTTCAGGTGGGT 60.340 52.381 0.00 0.00 0.00 4.51
617 618 1.340017 ACGATGGTCATTTCAGGTGGG 60.340 52.381 0.00 0.00 0.00 4.61
618 619 2.113860 ACGATGGTCATTTCAGGTGG 57.886 50.000 0.00 0.00 0.00 4.61
619 620 2.936498 GGTACGATGGTCATTTCAGGTG 59.064 50.000 0.00 0.00 0.00 4.00
620 621 2.093128 GGGTACGATGGTCATTTCAGGT 60.093 50.000 0.00 0.00 0.00 4.00
621 622 2.561569 GGGTACGATGGTCATTTCAGG 58.438 52.381 0.00 0.00 0.00 3.86
622 623 2.170607 AGGGGTACGATGGTCATTTCAG 59.829 50.000 0.00 0.00 0.00 3.02
623 624 2.169769 GAGGGGTACGATGGTCATTTCA 59.830 50.000 0.00 0.00 0.00 2.69
624 625 2.802057 CGAGGGGTACGATGGTCATTTC 60.802 54.545 0.00 0.00 0.00 2.17
625 626 1.138266 CGAGGGGTACGATGGTCATTT 59.862 52.381 0.00 0.00 0.00 2.32
626 627 0.750850 CGAGGGGTACGATGGTCATT 59.249 55.000 0.00 0.00 0.00 2.57
627 628 0.396695 ACGAGGGGTACGATGGTCAT 60.397 55.000 0.00 0.00 34.70 3.06
628 629 0.612732 AACGAGGGGTACGATGGTCA 60.613 55.000 0.00 0.00 34.70 4.02
629 630 1.066152 GTAACGAGGGGTACGATGGTC 59.934 57.143 0.00 0.00 34.70 4.02
630 631 1.106285 GTAACGAGGGGTACGATGGT 58.894 55.000 0.00 0.00 34.70 3.55
631 632 1.105457 TGTAACGAGGGGTACGATGG 58.895 55.000 0.00 0.00 34.70 3.51
632 633 2.925563 GTTTGTAACGAGGGGTACGATG 59.074 50.000 0.00 0.00 34.70 3.84
633 634 2.094026 GGTTTGTAACGAGGGGTACGAT 60.094 50.000 0.00 0.00 34.70 3.73
634 635 1.272212 GGTTTGTAACGAGGGGTACGA 59.728 52.381 0.00 0.00 34.70 3.43
635 636 1.713597 GGTTTGTAACGAGGGGTACG 58.286 55.000 0.00 0.00 0.00 3.67
636 637 1.713597 CGGTTTGTAACGAGGGGTAC 58.286 55.000 0.00 0.00 0.00 3.34
637 638 0.037419 GCGGTTTGTAACGAGGGGTA 60.037 55.000 0.00 0.00 0.00 3.69
638 639 1.301953 GCGGTTTGTAACGAGGGGT 60.302 57.895 0.00 0.00 0.00 4.95
639 640 2.036571 GGCGGTTTGTAACGAGGGG 61.037 63.158 0.00 0.00 0.00 4.79
640 641 0.675522 ATGGCGGTTTGTAACGAGGG 60.676 55.000 0.00 0.00 0.00 4.30
641 642 0.725117 GATGGCGGTTTGTAACGAGG 59.275 55.000 0.00 0.00 0.00 4.63
642 643 0.368907 CGATGGCGGTTTGTAACGAG 59.631 55.000 0.00 0.00 0.00 4.18
643 644 0.038435 TCGATGGCGGTTTGTAACGA 60.038 50.000 0.00 0.00 38.28 3.85
644 645 0.094046 GTCGATGGCGGTTTGTAACG 59.906 55.000 0.00 0.00 38.28 3.18
645 646 0.094046 CGTCGATGGCGGTTTGTAAC 59.906 55.000 0.00 0.00 38.28 2.50
646 647 0.319727 ACGTCGATGGCGGTTTGTAA 60.320 50.000 9.90 0.00 38.28 2.41
647 648 0.525311 TACGTCGATGGCGGTTTGTA 59.475 50.000 9.90 0.00 38.28 2.41
648 649 0.108520 ATACGTCGATGGCGGTTTGT 60.109 50.000 9.90 0.00 38.28 2.83
649 650 0.575390 GATACGTCGATGGCGGTTTG 59.425 55.000 9.90 0.00 38.28 2.93
650 651 0.458669 AGATACGTCGATGGCGGTTT 59.541 50.000 9.90 0.00 38.28 3.27
651 652 0.248907 CAGATACGTCGATGGCGGTT 60.249 55.000 9.90 0.00 38.28 4.44
652 653 1.099295 TCAGATACGTCGATGGCGGT 61.099 55.000 9.90 0.00 38.28 5.68
653 654 0.030235 TTCAGATACGTCGATGGCGG 59.970 55.000 9.90 0.00 38.28 6.13
654 655 1.121240 GTTCAGATACGTCGATGGCG 58.879 55.000 9.90 0.37 39.35 5.69
655 656 1.488527 GGTTCAGATACGTCGATGGC 58.511 55.000 9.90 0.00 0.00 4.40
656 657 1.065102 ACGGTTCAGATACGTCGATGG 59.935 52.381 9.90 0.00 35.77 3.51
657 658 2.470196 ACGGTTCAGATACGTCGATG 57.530 50.000 2.26 2.26 35.77 3.84
658 659 2.681848 AGAACGGTTCAGATACGTCGAT 59.318 45.455 21.86 0.00 40.31 3.59
659 660 2.079158 AGAACGGTTCAGATACGTCGA 58.921 47.619 21.86 0.00 40.31 4.20
660 661 2.539346 AGAACGGTTCAGATACGTCG 57.461 50.000 21.86 0.00 40.31 5.12
661 662 3.364023 CACAAGAACGGTTCAGATACGTC 59.636 47.826 21.86 0.00 40.31 4.34
662 663 3.243636 ACACAAGAACGGTTCAGATACGT 60.244 43.478 21.86 8.77 43.43 3.57
663 664 3.314553 ACACAAGAACGGTTCAGATACG 58.685 45.455 21.86 8.21 0.00 3.06
664 665 5.668558 AAACACAAGAACGGTTCAGATAC 57.331 39.130 21.86 0.00 0.00 2.24
665 666 6.238538 GGAAAAACACAAGAACGGTTCAGATA 60.239 38.462 21.86 0.00 0.00 1.98
666 667 5.449999 GGAAAAACACAAGAACGGTTCAGAT 60.450 40.000 21.86 5.91 0.00 2.90
667 668 4.142556 GGAAAAACACAAGAACGGTTCAGA 60.143 41.667 21.86 0.00 0.00 3.27
668 669 4.102649 GGAAAAACACAAGAACGGTTCAG 58.897 43.478 21.86 15.73 0.00 3.02
669 670 3.119424 GGGAAAAACACAAGAACGGTTCA 60.119 43.478 21.86 0.00 0.00 3.18
670 671 3.119424 TGGGAAAAACACAAGAACGGTTC 60.119 43.478 12.91 12.91 0.00 3.62
671 672 2.826725 TGGGAAAAACACAAGAACGGTT 59.173 40.909 0.00 0.00 0.00 4.44
672 673 2.164827 GTGGGAAAAACACAAGAACGGT 59.835 45.455 0.00 0.00 38.67 4.83
673 674 2.425668 AGTGGGAAAAACACAAGAACGG 59.574 45.455 0.00 0.00 41.21 4.44
674 675 3.119637 ACAGTGGGAAAAACACAAGAACG 60.120 43.478 0.00 0.00 41.21 3.95
675 676 4.173256 CACAGTGGGAAAAACACAAGAAC 58.827 43.478 0.00 0.00 41.21 3.01
676 677 3.829601 ACACAGTGGGAAAAACACAAGAA 59.170 39.130 0.00 0.00 41.21 2.52
677 678 3.426615 ACACAGTGGGAAAAACACAAGA 58.573 40.909 0.00 0.00 41.21 3.02
678 679 3.866883 ACACAGTGGGAAAAACACAAG 57.133 42.857 0.00 0.00 41.21 3.16
679 680 4.608948 AAACACAGTGGGAAAAACACAA 57.391 36.364 0.00 0.00 41.21 3.33
680 681 4.608948 AAAACACAGTGGGAAAAACACA 57.391 36.364 0.00 0.00 41.21 3.72
681 682 4.991687 TGAAAAACACAGTGGGAAAAACAC 59.008 37.500 0.00 0.00 39.10 3.32
682 683 5.215252 TGAAAAACACAGTGGGAAAAACA 57.785 34.783 0.00 0.00 0.00 2.83
683 684 4.629634 CCTGAAAAACACAGTGGGAAAAAC 59.370 41.667 0.00 0.00 34.04 2.43
684 685 4.528596 TCCTGAAAAACACAGTGGGAAAAA 59.471 37.500 0.00 0.00 34.04 1.94
685 686 4.081917 GTCCTGAAAAACACAGTGGGAAAA 60.082 41.667 0.00 0.00 34.04 2.29
686 687 3.445805 GTCCTGAAAAACACAGTGGGAAA 59.554 43.478 0.00 0.00 34.04 3.13
687 688 3.020984 GTCCTGAAAAACACAGTGGGAA 58.979 45.455 0.00 0.00 34.04 3.97
688 689 2.241176 AGTCCTGAAAAACACAGTGGGA 59.759 45.455 0.00 0.00 34.04 4.37
689 690 2.358898 CAGTCCTGAAAAACACAGTGGG 59.641 50.000 5.31 0.00 34.04 4.61
690 691 3.016736 ACAGTCCTGAAAAACACAGTGG 58.983 45.455 5.31 0.00 34.04 4.00
691 692 4.082787 ACAACAGTCCTGAAAAACACAGTG 60.083 41.667 0.00 0.00 34.04 3.66
692 693 4.079253 ACAACAGTCCTGAAAAACACAGT 58.921 39.130 0.40 0.00 34.04 3.55
693 694 4.701956 ACAACAGTCCTGAAAAACACAG 57.298 40.909 0.40 0.00 35.43 3.66
694 695 5.391097 CGTTACAACAGTCCTGAAAAACACA 60.391 40.000 0.40 0.00 0.00 3.72
695 696 5.025826 CGTTACAACAGTCCTGAAAAACAC 58.974 41.667 0.40 0.00 0.00 3.32
696 697 4.936411 TCGTTACAACAGTCCTGAAAAACA 59.064 37.500 0.40 0.00 0.00 2.83
697 698 5.064325 ACTCGTTACAACAGTCCTGAAAAAC 59.936 40.000 0.40 0.20 0.00 2.43
698 699 5.180271 ACTCGTTACAACAGTCCTGAAAAA 58.820 37.500 0.40 0.00 0.00 1.94
699 700 4.761975 ACTCGTTACAACAGTCCTGAAAA 58.238 39.130 0.40 0.00 0.00 2.29
700 701 4.395959 ACTCGTTACAACAGTCCTGAAA 57.604 40.909 0.40 0.00 0.00 2.69
701 702 4.098960 AGAACTCGTTACAACAGTCCTGAA 59.901 41.667 0.40 0.00 0.00 3.02
702 703 3.635373 AGAACTCGTTACAACAGTCCTGA 59.365 43.478 0.40 0.00 0.00 3.86
703 704 3.736252 CAGAACTCGTTACAACAGTCCTG 59.264 47.826 0.00 0.00 0.00 3.86
704 705 3.635373 TCAGAACTCGTTACAACAGTCCT 59.365 43.478 0.00 0.00 0.00 3.85
705 706 3.973657 TCAGAACTCGTTACAACAGTCC 58.026 45.455 0.00 0.00 0.00 3.85
706 707 5.117287 GTCATCAGAACTCGTTACAACAGTC 59.883 44.000 0.00 0.00 0.00 3.51
707 708 4.982916 GTCATCAGAACTCGTTACAACAGT 59.017 41.667 0.00 0.00 0.00 3.55
708 709 4.386049 GGTCATCAGAACTCGTTACAACAG 59.614 45.833 0.00 0.00 0.00 3.16
709 710 4.304110 GGTCATCAGAACTCGTTACAACA 58.696 43.478 0.00 0.00 0.00 3.33
710 711 3.678548 GGGTCATCAGAACTCGTTACAAC 59.321 47.826 0.00 0.00 0.00 3.32
711 712 3.322541 TGGGTCATCAGAACTCGTTACAA 59.677 43.478 0.00 0.00 0.00 2.41
712 713 2.894765 TGGGTCATCAGAACTCGTTACA 59.105 45.455 0.00 0.00 0.00 2.41
713 714 3.251571 GTGGGTCATCAGAACTCGTTAC 58.748 50.000 0.00 0.00 0.00 2.50
714 715 2.094906 CGTGGGTCATCAGAACTCGTTA 60.095 50.000 0.00 0.00 0.00 3.18
715 716 1.336887 CGTGGGTCATCAGAACTCGTT 60.337 52.381 0.00 0.00 0.00 3.85
716 717 0.243907 CGTGGGTCATCAGAACTCGT 59.756 55.000 0.00 0.00 0.00 4.18
717 718 1.078759 GCGTGGGTCATCAGAACTCG 61.079 60.000 0.00 0.00 34.14 4.18
718 719 0.247736 AGCGTGGGTCATCAGAACTC 59.752 55.000 0.00 0.00 0.00 3.01
719 720 0.036952 CAGCGTGGGTCATCAGAACT 60.037 55.000 0.00 0.00 0.00 3.01
720 721 0.320771 ACAGCGTGGGTCATCAGAAC 60.321 55.000 0.00 0.00 0.00 3.01
721 722 1.262417 TACAGCGTGGGTCATCAGAA 58.738 50.000 0.00 0.00 0.00 3.02
722 723 1.067142 GTTACAGCGTGGGTCATCAGA 60.067 52.381 0.00 0.00 0.00 3.27
723 724 1.066858 AGTTACAGCGTGGGTCATCAG 60.067 52.381 0.00 0.00 0.00 2.90
724 725 0.973632 AGTTACAGCGTGGGTCATCA 59.026 50.000 0.00 0.00 0.00 3.07
725 726 2.953466 TAGTTACAGCGTGGGTCATC 57.047 50.000 0.00 0.00 0.00 2.92
726 727 3.906720 AATAGTTACAGCGTGGGTCAT 57.093 42.857 0.00 0.00 0.00 3.06
727 728 3.688694 AAATAGTTACAGCGTGGGTCA 57.311 42.857 0.00 0.00 0.00 4.02
728 729 3.867493 GGTAAATAGTTACAGCGTGGGTC 59.133 47.826 14.45 0.00 41.31 4.46
729 730 3.516700 AGGTAAATAGTTACAGCGTGGGT 59.483 43.478 14.45 0.00 41.31 4.51
730 731 4.117685 GAGGTAAATAGTTACAGCGTGGG 58.882 47.826 14.45 0.00 41.31 4.61
731 732 4.117685 GGAGGTAAATAGTTACAGCGTGG 58.882 47.826 14.45 0.00 41.31 4.94
732 733 3.795101 CGGAGGTAAATAGTTACAGCGTG 59.205 47.826 14.45 0.00 41.31 5.34
733 734 3.445096 ACGGAGGTAAATAGTTACAGCGT 59.555 43.478 14.45 5.99 41.31 5.07
734 735 4.037858 ACGGAGGTAAATAGTTACAGCG 57.962 45.455 14.45 5.50 41.31 5.18
735 736 4.501921 CGAACGGAGGTAAATAGTTACAGC 59.498 45.833 14.45 5.79 41.31 4.40
755 756 3.170717 AGTGGGTCATAAGAACTCCGAA 58.829 45.455 0.00 0.00 0.00 4.30
756 757 2.758979 GAGTGGGTCATAAGAACTCCGA 59.241 50.000 0.00 0.00 32.82 4.55
757 758 2.159085 GGAGTGGGTCATAAGAACTCCG 60.159 54.545 4.52 0.00 45.38 4.63
795 809 7.011763 GTGGTACCGTAGAACTCTTTTTCTTTT 59.988 37.037 7.57 0.00 37.09 2.27
814 828 3.795638 GCTAAGCAGCGTGGTACC 58.204 61.111 4.43 4.43 38.22 3.34
860 877 1.141053 AGGAAGGATATTGCGGTGGTC 59.859 52.381 0.00 0.00 0.00 4.02
897 920 4.405756 AAGGAAGGAGAGGAAGTAGTCA 57.594 45.455 0.00 0.00 0.00 3.41
983 1010 0.602106 CATGCCGATCGATGCCTCTT 60.602 55.000 18.66 0.00 0.00 2.85
1041 1080 1.652563 GAACGTGTGGTGGAAAGGC 59.347 57.895 0.00 0.00 0.00 4.35
1169 1208 2.584391 GCCACGTGGAGGAGGTTCT 61.584 63.158 38.30 0.00 37.39 3.01
1178 1217 2.997315 CTCTCCTGGCCACGTGGA 60.997 66.667 38.30 17.53 37.39 4.02
1775 1839 3.073735 CTGCGAGGTGAGGGCTCT 61.074 66.667 0.00 0.00 0.00 4.09
1934 2030 3.589654 TTCCTTGCACGAGCCTCGG 62.590 63.158 19.61 8.57 45.59 4.63
1938 2034 1.004440 AGTCTTCCTTGCACGAGCC 60.004 57.895 1.39 0.00 41.13 4.70
1982 2081 3.808466 TCAAGGACTTGATCAGATCGG 57.192 47.619 10.52 4.10 43.90 4.18
1996 2096 2.594131 TCAGACTTCGGACTTCAAGGA 58.406 47.619 0.00 0.00 0.00 3.36
2100 2200 4.884668 ACTCTCTTCGGTCCATGTTAAA 57.115 40.909 0.00 0.00 0.00 1.52
2111 2211 5.862860 GGAAAAAGTGTAGTACTCTCTTCGG 59.137 44.000 0.00 0.00 39.18 4.30
2133 2233 5.595133 ACGGAAATTTTTGGACTTTACTGGA 59.405 36.000 0.00 0.00 0.00 3.86
2146 2322 7.254286 CGAAACTCCATTGAAACGGAAATTTTT 60.254 33.333 0.00 0.00 0.00 1.94
2162 2338 4.360951 TGGGAAAACTACGAAACTCCAT 57.639 40.909 0.00 0.00 0.00 3.41
2165 2341 5.163733 TGTTGTTGGGAAAACTACGAAACTC 60.164 40.000 0.00 0.00 0.00 3.01
2258 2459 1.079127 GCATAGCTGGTGTCCACGT 60.079 57.895 0.00 0.00 0.00 4.49
2270 2496 4.611943 TCAAAGTATCGACTCAGCATAGC 58.388 43.478 0.00 0.00 33.58 2.97
2377 2604 8.560374 AGTCTAATACTTGAACTTCAAAAGTGC 58.440 33.333 5.72 0.00 37.11 4.40
2510 2747 9.960056 TTCTTCAATAGAACGCTGCTAGGTAGC 62.960 44.444 1.79 1.79 42.42 3.58
2631 2968 0.541863 CTTGATTCGGCTACCTGGGT 59.458 55.000 0.00 0.00 0.00 4.51
2632 2969 0.541863 ACTTGATTCGGCTACCTGGG 59.458 55.000 0.00 0.00 0.00 4.45
2633 2970 2.403252 AACTTGATTCGGCTACCTGG 57.597 50.000 0.00 0.00 0.00 4.45
2634 2971 7.730364 ATTTATAACTTGATTCGGCTACCTG 57.270 36.000 0.00 0.00 0.00 4.00
2786 3144 1.153765 CTCACGAGCATGCTTCGGA 60.154 57.895 29.72 23.94 0.00 4.55
2830 3188 2.996631 AGTGCCACCATGAATTCTCTC 58.003 47.619 7.05 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.