Multiple sequence alignment - TraesCS4A01G243500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G243500 chr4A 100.000 6951 0 0 1 6951 553452942 553445992 0.000000e+00 12837.0
1 TraesCS4A01G243500 chr4A 94.818 521 25 2 6432 6951 427498643 427499162 0.000000e+00 811.0
2 TraesCS4A01G243500 chr4A 96.154 104 4 0 1 104 616709758 616709861 3.330000e-38 171.0
3 TraesCS4A01G243500 chr4B 94.098 2948 115 22 3510 6431 65945391 65948305 0.000000e+00 4425.0
4 TraesCS4A01G243500 chr4B 87.869 2844 179 72 658 3421 65942628 65945385 0.000000e+00 3188.0
5 TraesCS4A01G243500 chr4B 83.304 563 59 17 5879 6431 66087841 66088378 2.910000e-133 486.0
6 TraesCS4A01G243500 chr4D 96.850 1492 38 2 3506 4989 45646358 45647848 0.000000e+00 2486.0
7 TraesCS4A01G243500 chr4D 93.212 1429 58 15 4988 6407 45647931 45649329 0.000000e+00 2065.0
8 TraesCS4A01G243500 chr4D 89.704 1282 93 19 2170 3425 45645092 45646360 0.000000e+00 1600.0
9 TraesCS4A01G243500 chr4D 82.564 866 67 32 758 1586 45643732 45644550 0.000000e+00 686.0
10 TraesCS4A01G243500 chr4D 87.425 167 14 4 1759 1923 45644819 45644980 1.190000e-42 185.0
11 TraesCS4A01G243500 chr4D 97.849 93 2 0 3422 3514 478668929 478669021 2.010000e-35 161.0
12 TraesCS4A01G243500 chr4D 80.714 140 19 6 1898 2035 45645466 45645599 1.230000e-17 102.0
13 TraesCS4A01G243500 chr4D 100.000 54 0 0 3752 3805 231929739 231929792 4.440000e-17 100.0
14 TraesCS4A01G243500 chr2B 93.307 1016 55 6 4992 6006 274299695 274298692 0.000000e+00 1487.0
15 TraesCS4A01G243500 chr2B 95.594 522 21 2 6432 6951 110769892 110769371 0.000000e+00 835.0
16 TraesCS4A01G243500 chr2B 94.667 525 26 2 6428 6951 628457161 628456638 0.000000e+00 813.0
17 TraesCS4A01G243500 chr2B 95.702 349 13 2 112 460 64025866 64025520 1.690000e-155 560.0
18 TraesCS4A01G243500 chr2B 81.787 291 44 8 5085 5372 26298135 26297851 1.170000e-57 235.0
19 TraesCS4A01G243500 chr2B 99.038 104 1 0 1 104 667803705 667803808 3.310000e-43 187.0
20 TraesCS4A01G243500 chr2B 96.907 97 2 1 3421 3516 532097537 532097441 2.010000e-35 161.0
21 TraesCS4A01G243500 chr2B 91.954 87 4 2 3743 3828 26299625 26299541 1.220000e-22 119.0
22 TraesCS4A01G243500 chr5B 95.393 521 22 2 6432 6951 411787795 411788314 0.000000e+00 828.0
23 TraesCS4A01G243500 chr5B 94.490 363 18 2 112 474 592923503 592923143 6.090000e-155 558.0
24 TraesCS4A01G243500 chr1B 95.229 524 23 2 6429 6951 44074232 44073710 0.000000e+00 828.0
25 TraesCS4A01G243500 chr7A 95.010 521 23 3 6432 6951 180090021 180090539 0.000000e+00 815.0
26 TraesCS4A01G243500 chr3B 94.206 535 29 2 6419 6951 756127400 756126866 0.000000e+00 815.0
27 TraesCS4A01G243500 chr3B 94.556 349 17 2 112 460 754067755 754067409 7.930000e-149 538.0
28 TraesCS4A01G243500 chr7B 94.828 522 26 1 6431 6951 86637799 86638320 0.000000e+00 813.0
29 TraesCS4A01G243500 chr7B 94.183 361 19 2 112 472 680705363 680705005 3.660000e-152 549.0
30 TraesCS4A01G243500 chr7B 98.148 54 1 0 3752 3805 76839510 76839457 2.060000e-15 95.3
31 TraesCS4A01G243500 chr7B 98.148 54 1 0 3752 3805 262903654 262903601 2.060000e-15 95.3
32 TraesCS4A01G243500 chr2A 94.497 527 26 2 6426 6951 25022719 25023243 0.000000e+00 809.0
33 TraesCS4A01G243500 chr2A 98.058 103 2 0 2 104 25354502 25354400 5.540000e-41 180.0
34 TraesCS4A01G243500 chr2A 93.056 72 5 0 3743 3814 16675594 16675523 9.540000e-19 106.0
35 TraesCS4A01G243500 chr1D 96.721 366 11 1 112 477 22596760 22596396 5.960000e-170 608.0
36 TraesCS4A01G243500 chr1D 99.038 104 1 0 1 104 22597379 22597276 3.310000e-43 187.0
37 TraesCS4A01G243500 chr1A 95.592 363 12 2 112 474 489293480 489293122 4.670000e-161 579.0
38 TraesCS4A01G243500 chr1A 99.038 104 1 0 1 104 489317705 489317602 3.310000e-43 187.0
39 TraesCS4A01G243500 chr1A 97.087 103 3 0 2 104 536290173 536290275 2.580000e-39 174.0
40 TraesCS4A01G243500 chr1A 96.907 97 1 2 3423 3517 548772379 548772283 2.010000e-35 161.0
41 TraesCS4A01G243500 chr6A 94.309 369 20 1 112 480 282148611 282148244 1.310000e-156 564.0
42 TraesCS4A01G243500 chr6A 98.077 104 2 0 1 104 282151278 282151175 1.540000e-41 182.0
43 TraesCS4A01G243500 chr6A 97.849 93 1 1 3423 3514 540320354 540320446 7.220000e-35 159.0
44 TraesCS4A01G243500 chr6A 96.842 95 1 2 3419 3513 562819480 562819388 2.600000e-34 158.0
45 TraesCS4A01G243500 chr3D 93.132 364 21 4 112 474 209672749 209673109 1.330000e-146 531.0
46 TraesCS4A01G243500 chr3D 98.077 104 2 0 1 104 209670087 209670190 1.540000e-41 182.0
47 TraesCS4A01G243500 chr6D 93.678 348 17 5 134 479 466382830 466383174 3.720000e-142 516.0
48 TraesCS4A01G243500 chr6D 98.077 104 2 0 1 104 466380457 466380560 1.540000e-41 182.0
49 TraesCS4A01G243500 chr6D 93.333 105 4 3 3420 3524 271233440 271233541 1.210000e-32 152.0
50 TraesCS4A01G243500 chr2D 80.756 291 47 8 5085 5372 14402026 14401742 1.170000e-52 219.0
51 TraesCS4A01G243500 chr2D 90.991 111 8 2 3423 3533 455242712 455242604 1.560000e-31 148.0
52 TraesCS4A01G243500 chr2D 93.056 72 5 0 3743 3814 14403485 14403414 9.540000e-19 106.0
53 TraesCS4A01G243500 chr5D 97.872 94 2 0 3423 3516 137915252 137915345 5.580000e-36 163.0
54 TraesCS4A01G243500 chr3A 95.918 98 4 0 3413 3510 24718831 24718928 7.220000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G243500 chr4A 553445992 553452942 6950 True 12837.000000 12837 100.0000 1 6951 1 chr4A.!!$R1 6950
1 TraesCS4A01G243500 chr4A 427498643 427499162 519 False 811.000000 811 94.8180 6432 6951 1 chr4A.!!$F1 519
2 TraesCS4A01G243500 chr4B 65942628 65948305 5677 False 3806.500000 4425 90.9835 658 6431 2 chr4B.!!$F2 5773
3 TraesCS4A01G243500 chr4B 66087841 66088378 537 False 486.000000 486 83.3040 5879 6431 1 chr4B.!!$F1 552
4 TraesCS4A01G243500 chr4D 45643732 45649329 5597 False 1187.333333 2486 88.4115 758 6407 6 chr4D.!!$F3 5649
5 TraesCS4A01G243500 chr2B 274298692 274299695 1003 True 1487.000000 1487 93.3070 4992 6006 1 chr2B.!!$R3 1014
6 TraesCS4A01G243500 chr2B 110769371 110769892 521 True 835.000000 835 95.5940 6432 6951 1 chr2B.!!$R2 519
7 TraesCS4A01G243500 chr2B 628456638 628457161 523 True 813.000000 813 94.6670 6428 6951 1 chr2B.!!$R5 523
8 TraesCS4A01G243500 chr5B 411787795 411788314 519 False 828.000000 828 95.3930 6432 6951 1 chr5B.!!$F1 519
9 TraesCS4A01G243500 chr1B 44073710 44074232 522 True 828.000000 828 95.2290 6429 6951 1 chr1B.!!$R1 522
10 TraesCS4A01G243500 chr7A 180090021 180090539 518 False 815.000000 815 95.0100 6432 6951 1 chr7A.!!$F1 519
11 TraesCS4A01G243500 chr3B 756126866 756127400 534 True 815.000000 815 94.2060 6419 6951 1 chr3B.!!$R2 532
12 TraesCS4A01G243500 chr7B 86637799 86638320 521 False 813.000000 813 94.8280 6431 6951 1 chr7B.!!$F1 520
13 TraesCS4A01G243500 chr2A 25022719 25023243 524 False 809.000000 809 94.4970 6426 6951 1 chr2A.!!$F1 525
14 TraesCS4A01G243500 chr1D 22596396 22597379 983 True 397.500000 608 97.8795 1 477 2 chr1D.!!$R1 476
15 TraesCS4A01G243500 chr6A 282148244 282151278 3034 True 373.000000 564 96.1930 1 480 2 chr6A.!!$R2 479
16 TraesCS4A01G243500 chr3D 209670087 209673109 3022 False 356.500000 531 95.6045 1 474 2 chr3D.!!$F1 473
17 TraesCS4A01G243500 chr6D 466380457 466383174 2717 False 349.000000 516 95.8775 1 479 2 chr6D.!!$F2 478

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
510 3074 0.041312 AGTGTTCGCAAACGTCATGC 60.041 50.000 14.43 14.43 41.18 4.06 F
1310 3923 0.026285 GTCGGATCGTTTTGCGGATG 59.974 55.000 0.00 0.00 41.72 3.51 F
2055 4814 0.451783 CACTAGGATTTGGTTGCCGC 59.548 55.000 0.00 0.00 0.00 6.53 F
3434 6230 0.040058 TGGTTGCTACTCCCTCCGTA 59.960 55.000 0.00 0.00 0.00 4.02 F
3830 6627 1.123861 TGCACCTGCCTCTCTCTGTT 61.124 55.000 0.00 0.00 41.18 3.16 F
4116 6913 3.558418 GCCATCCATGCATTTTGTGATTC 59.442 43.478 0.00 0.00 0.00 2.52 F
5155 8044 0.609662 AGCATGGTGTCAAATTGGGC 59.390 50.000 0.00 0.00 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 4832 0.108662 TGCACAGATGACGTAGCAGG 60.109 55.000 0.0 0.0 0.00 4.85 R
3301 6097 0.321671 TGGCTTTGGAAGTCTCGGAG 59.678 55.000 0.0 0.0 33.26 4.63 R
3680 6477 3.435105 TGTCAGGCAACAATTCACAAC 57.565 42.857 0.0 0.0 41.41 3.32 R
4328 7125 1.645710 GTTTCTCTGGAGGAGGTGGA 58.354 55.000 0.0 0.0 42.10 4.02 R
5101 7990 1.961394 TCTTTGTAGTCAGTCCGCAGT 59.039 47.619 0.0 0.0 0.00 4.40 R
5464 8356 2.154462 CACCACAAGACCCTAAAGCAG 58.846 52.381 0.0 0.0 0.00 4.24 R
6238 9140 0.179062 CACCTGCCTCTGCCTGATAC 60.179 60.000 0.0 0.0 36.33 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 4.039730 CGAGGGGATGATGAGACATTACTT 59.960 45.833 0.00 0.00 0.00 2.24
104 105 2.095059 GCAAACAATGTGGCTCCTACTG 60.095 50.000 3.45 0.00 0.00 2.74
106 107 3.788227 AACAATGTGGCTCCTACTGAA 57.212 42.857 0.00 0.00 0.00 3.02
107 108 3.788227 ACAATGTGGCTCCTACTGAAA 57.212 42.857 0.00 0.00 0.00 2.69
109 110 4.012374 ACAATGTGGCTCCTACTGAAATG 58.988 43.478 0.00 0.00 0.00 2.32
143 2707 4.304110 CTGCTGAAATGCTGTCAAAATGT 58.696 39.130 0.00 0.00 0.00 2.71
206 2770 5.375417 TGTTGTTGGATGATGCAAAGTAG 57.625 39.130 0.00 0.00 26.96 2.57
238 2802 4.886489 TGAGTTGGTGATGTTTTCATGTCA 59.114 37.500 0.00 0.00 41.05 3.58
247 2811 6.203338 GTGATGTTTTCATGTCAAATTGGCTT 59.797 34.615 0.00 0.00 41.05 4.35
272 2836 6.430925 TCTGAAATGTTGCACTATAGTTGCTT 59.569 34.615 20.56 11.11 0.00 3.91
303 2867 4.769488 TGTTGAAATGTATGCTTTGGGCTA 59.231 37.500 0.00 0.00 42.39 3.93
480 3044 6.206243 GCATTCTGGCTATTGTCTCATGTAAT 59.794 38.462 0.00 0.00 0.00 1.89
481 3045 7.255381 GCATTCTGGCTATTGTCTCATGTAATT 60.255 37.037 0.00 0.00 0.00 1.40
482 3046 8.627403 CATTCTGGCTATTGTCTCATGTAATTT 58.373 33.333 0.00 0.00 0.00 1.82
483 3047 7.558161 TCTGGCTATTGTCTCATGTAATTTG 57.442 36.000 0.00 0.00 0.00 2.32
484 3048 7.112122 TCTGGCTATTGTCTCATGTAATTTGT 58.888 34.615 0.00 0.00 0.00 2.83
485 3049 7.280876 TCTGGCTATTGTCTCATGTAATTTGTC 59.719 37.037 0.00 0.00 0.00 3.18
486 3050 6.883756 TGGCTATTGTCTCATGTAATTTGTCA 59.116 34.615 0.00 0.00 0.00 3.58
487 3051 7.557358 TGGCTATTGTCTCATGTAATTTGTCAT 59.443 33.333 0.00 0.00 0.00 3.06
488 3052 9.056005 GGCTATTGTCTCATGTAATTTGTCATA 57.944 33.333 0.00 0.00 0.00 2.15
498 3062 9.605955 TCATGTAATTTGTCATAAAAGTGTTCG 57.394 29.630 0.00 0.00 0.00 3.95
499 3063 7.845617 TGTAATTTGTCATAAAAGTGTTCGC 57.154 32.000 0.00 0.00 0.00 4.70
500 3064 7.418408 TGTAATTTGTCATAAAAGTGTTCGCA 58.582 30.769 0.00 0.00 0.00 5.10
501 3065 7.915923 TGTAATTTGTCATAAAAGTGTTCGCAA 59.084 29.630 0.00 0.00 0.00 4.85
502 3066 7.763172 AATTTGTCATAAAAGTGTTCGCAAA 57.237 28.000 0.00 0.00 0.00 3.68
503 3067 6.561945 TTTGTCATAAAAGTGTTCGCAAAC 57.438 33.333 0.00 0.00 35.85 2.93
504 3068 4.275662 TGTCATAAAAGTGTTCGCAAACG 58.724 39.130 0.00 0.00 38.28 3.60
505 3069 4.201832 TGTCATAAAAGTGTTCGCAAACGT 60.202 37.500 0.00 0.00 41.18 3.99
506 3070 4.374828 GTCATAAAAGTGTTCGCAAACGTC 59.625 41.667 0.00 0.00 41.18 4.34
507 3071 2.904011 AAAAGTGTTCGCAAACGTCA 57.096 40.000 0.00 0.00 41.18 4.35
508 3072 3.414549 AAAAGTGTTCGCAAACGTCAT 57.585 38.095 0.00 0.00 41.18 3.06
509 3073 2.383298 AAGTGTTCGCAAACGTCATG 57.617 45.000 0.00 0.00 41.18 3.07
510 3074 0.041312 AGTGTTCGCAAACGTCATGC 60.041 50.000 14.43 14.43 41.18 4.06
511 3075 0.996727 GTGTTCGCAAACGTCATGCC 60.997 55.000 17.53 7.21 40.72 4.40
512 3076 1.163420 TGTTCGCAAACGTCATGCCT 61.163 50.000 17.53 0.00 40.72 4.75
513 3077 0.452784 GTTCGCAAACGTCATGCCTC 60.453 55.000 17.53 7.24 40.72 4.70
514 3078 0.602638 TTCGCAAACGTCATGCCTCT 60.603 50.000 17.53 0.00 40.72 3.69
515 3079 1.014044 TCGCAAACGTCATGCCTCTC 61.014 55.000 17.53 0.00 40.72 3.20
516 3080 1.421485 GCAAACGTCATGCCTCTCG 59.579 57.895 13.67 0.00 37.85 4.04
517 3081 1.421485 CAAACGTCATGCCTCTCGC 59.579 57.895 0.00 0.00 38.31 5.03
518 3082 1.016130 CAAACGTCATGCCTCTCGCT 61.016 55.000 0.00 0.00 38.78 4.93
519 3083 1.016130 AAACGTCATGCCTCTCGCTG 61.016 55.000 0.00 0.00 38.78 5.18
520 3084 1.877576 AACGTCATGCCTCTCGCTGA 61.878 55.000 0.00 0.00 38.78 4.26
521 3085 1.153765 CGTCATGCCTCTCGCTGAA 60.154 57.895 0.00 0.00 38.78 3.02
522 3086 1.416813 CGTCATGCCTCTCGCTGAAC 61.417 60.000 0.00 0.00 38.78 3.18
523 3087 0.390340 GTCATGCCTCTCGCTGAACA 60.390 55.000 0.00 0.00 38.78 3.18
524 3088 0.538584 TCATGCCTCTCGCTGAACAT 59.461 50.000 0.00 0.00 38.78 2.71
525 3089 1.065926 TCATGCCTCTCGCTGAACATT 60.066 47.619 0.00 0.00 38.78 2.71
526 3090 1.329906 CATGCCTCTCGCTGAACATTC 59.670 52.381 0.00 0.00 38.78 2.67
527 3091 0.737367 TGCCTCTCGCTGAACATTCG 60.737 55.000 0.00 0.00 38.78 3.34
528 3092 2.002127 CCTCTCGCTGAACATTCGC 58.998 57.895 0.00 0.31 0.00 4.70
529 3093 0.737367 CCTCTCGCTGAACATTCGCA 60.737 55.000 8.44 0.00 0.00 5.10
530 3094 1.070821 CTCTCGCTGAACATTCGCAA 58.929 50.000 8.44 0.00 0.00 4.85
531 3095 1.060266 CTCTCGCTGAACATTCGCAAG 59.940 52.381 8.44 1.52 0.00 4.01
532 3096 0.519999 CTCGCTGAACATTCGCAAGC 60.520 55.000 8.44 2.19 37.18 4.01
533 3097 0.950555 TCGCTGAACATTCGCAAGCT 60.951 50.000 8.44 0.00 37.18 3.74
534 3098 0.721154 CGCTGAACATTCGCAAGCTA 59.279 50.000 0.00 0.00 37.18 3.32
535 3099 1.328680 CGCTGAACATTCGCAAGCTAT 59.671 47.619 0.00 0.00 37.18 2.97
536 3100 2.223112 CGCTGAACATTCGCAAGCTATT 60.223 45.455 0.00 0.00 37.18 1.73
537 3101 3.103738 GCTGAACATTCGCAAGCTATTG 58.896 45.455 0.00 0.00 39.57 1.90
545 3109 4.513519 CAAGCTATTGCGGTCCGA 57.486 55.556 17.49 0.00 45.42 4.55
546 3110 2.992089 CAAGCTATTGCGGTCCGAT 58.008 52.632 17.49 2.67 45.42 4.18
547 3111 0.861837 CAAGCTATTGCGGTCCGATC 59.138 55.000 17.49 0.00 45.42 3.69
548 3112 0.464036 AAGCTATTGCGGTCCGATCA 59.536 50.000 17.49 0.57 45.42 2.92
549 3113 0.681733 AGCTATTGCGGTCCGATCAT 59.318 50.000 17.49 5.48 45.42 2.45
550 3114 1.071605 GCTATTGCGGTCCGATCATC 58.928 55.000 17.49 0.00 0.00 2.92
551 3115 1.605457 GCTATTGCGGTCCGATCATCA 60.605 52.381 17.49 0.00 0.00 3.07
552 3116 2.332104 CTATTGCGGTCCGATCATCAG 58.668 52.381 17.49 0.00 0.00 2.90
553 3117 0.752658 ATTGCGGTCCGATCATCAGA 59.247 50.000 17.49 0.00 0.00 3.27
554 3118 0.534873 TTGCGGTCCGATCATCAGAA 59.465 50.000 17.49 0.00 0.00 3.02
555 3119 0.534873 TGCGGTCCGATCATCAGAAA 59.465 50.000 17.49 0.00 0.00 2.52
556 3120 1.066502 TGCGGTCCGATCATCAGAAAA 60.067 47.619 17.49 0.00 0.00 2.29
557 3121 2.006888 GCGGTCCGATCATCAGAAAAA 58.993 47.619 17.49 0.00 0.00 1.94
578 3142 7.979444 AAAAACGTTATTCCATCTTCAGAGA 57.021 32.000 0.00 0.00 36.09 3.10
579 3143 7.979444 AAAACGTTATTCCATCTTCAGAGAA 57.021 32.000 0.00 0.00 35.07 2.87
580 3144 6.969828 AACGTTATTCCATCTTCAGAGAAC 57.030 37.500 0.00 0.00 35.07 3.01
581 3145 5.420409 ACGTTATTCCATCTTCAGAGAACC 58.580 41.667 0.00 0.00 35.07 3.62
582 3146 4.504461 CGTTATTCCATCTTCAGAGAACCG 59.496 45.833 0.00 0.00 35.07 4.44
583 3147 3.550437 ATTCCATCTTCAGAGAACCGG 57.450 47.619 0.00 0.00 35.07 5.28
584 3148 0.537188 TCCATCTTCAGAGAACCGGC 59.463 55.000 0.00 0.00 35.07 6.13
585 3149 0.250234 CCATCTTCAGAGAACCGGCA 59.750 55.000 0.00 0.00 35.07 5.69
586 3150 1.649664 CATCTTCAGAGAACCGGCAG 58.350 55.000 0.00 0.00 35.07 4.85
587 3151 1.205655 CATCTTCAGAGAACCGGCAGA 59.794 52.381 0.00 0.00 35.07 4.26
588 3152 0.891373 TCTTCAGAGAACCGGCAGAG 59.109 55.000 0.00 0.00 0.00 3.35
589 3153 0.108424 CTTCAGAGAACCGGCAGAGG 60.108 60.000 0.00 0.00 37.30 3.69
590 3154 1.544825 TTCAGAGAACCGGCAGAGGG 61.545 60.000 0.00 0.00 35.02 4.30
591 3155 3.394836 AGAGAACCGGCAGAGGGC 61.395 66.667 0.00 0.00 43.74 5.19
602 3166 2.355010 GCAGAGGGCATATTGGTCTT 57.645 50.000 0.00 0.00 43.97 3.01
603 3167 3.492102 GCAGAGGGCATATTGGTCTTA 57.508 47.619 0.00 0.00 43.97 2.10
604 3168 3.406764 GCAGAGGGCATATTGGTCTTAG 58.593 50.000 0.00 0.00 43.97 2.18
605 3169 3.181450 GCAGAGGGCATATTGGTCTTAGT 60.181 47.826 0.00 0.00 43.97 2.24
606 3170 4.040461 GCAGAGGGCATATTGGTCTTAGTA 59.960 45.833 0.00 0.00 43.97 1.82
607 3171 5.788450 CAGAGGGCATATTGGTCTTAGTAG 58.212 45.833 0.00 0.00 0.00 2.57
608 3172 5.305644 CAGAGGGCATATTGGTCTTAGTAGT 59.694 44.000 0.00 0.00 0.00 2.73
609 3173 6.493802 CAGAGGGCATATTGGTCTTAGTAGTA 59.506 42.308 0.00 0.00 0.00 1.82
610 3174 7.179338 CAGAGGGCATATTGGTCTTAGTAGTAT 59.821 40.741 0.00 0.00 0.00 2.12
611 3175 7.179338 AGAGGGCATATTGGTCTTAGTAGTATG 59.821 40.741 0.00 0.00 0.00 2.39
612 3176 6.213600 AGGGCATATTGGTCTTAGTAGTATGG 59.786 42.308 0.00 0.00 0.00 2.74
613 3177 6.013639 GGGCATATTGGTCTTAGTAGTATGGT 60.014 42.308 0.00 0.00 0.00 3.55
614 3178 7.179694 GGGCATATTGGTCTTAGTAGTATGGTA 59.820 40.741 0.00 0.00 0.00 3.25
615 3179 8.759782 GGCATATTGGTCTTAGTAGTATGGTAT 58.240 37.037 0.00 0.00 0.00 2.73
619 3183 8.792830 ATTGGTCTTAGTAGTATGGTATTGGA 57.207 34.615 0.00 0.00 0.00 3.53
620 3184 8.792830 TTGGTCTTAGTAGTATGGTATTGGAT 57.207 34.615 0.00 0.00 0.00 3.41
621 3185 8.190326 TGGTCTTAGTAGTATGGTATTGGATG 57.810 38.462 0.00 0.00 0.00 3.51
622 3186 7.097834 GGTCTTAGTAGTATGGTATTGGATGC 58.902 42.308 0.00 0.00 0.00 3.91
623 3187 7.038941 GGTCTTAGTAGTATGGTATTGGATGCT 60.039 40.741 0.00 0.00 0.00 3.79
624 3188 7.815068 GTCTTAGTAGTATGGTATTGGATGCTG 59.185 40.741 0.00 0.00 0.00 4.41
625 3189 4.899502 AGTAGTATGGTATTGGATGCTGC 58.100 43.478 0.00 0.00 0.00 5.25
626 3190 3.146104 AGTATGGTATTGGATGCTGCC 57.854 47.619 0.00 0.00 0.00 4.85
627 3191 2.713167 AGTATGGTATTGGATGCTGCCT 59.287 45.455 0.00 0.00 0.00 4.75
628 3192 1.991121 ATGGTATTGGATGCTGCCTG 58.009 50.000 0.00 0.00 0.00 4.85
629 3193 0.918258 TGGTATTGGATGCTGCCTGA 59.082 50.000 0.00 0.00 0.00 3.86
630 3194 1.496001 TGGTATTGGATGCTGCCTGAT 59.504 47.619 0.00 0.00 0.00 2.90
631 3195 2.157738 GGTATTGGATGCTGCCTGATC 58.842 52.381 0.00 0.00 0.00 2.92
632 3196 2.487805 GGTATTGGATGCTGCCTGATCA 60.488 50.000 0.00 0.00 0.00 2.92
633 3197 2.677542 ATTGGATGCTGCCTGATCAT 57.322 45.000 0.00 0.00 0.00 2.45
634 3198 1.977056 TTGGATGCTGCCTGATCATC 58.023 50.000 0.00 0.00 36.71 2.92
635 3199 0.841289 TGGATGCTGCCTGATCATCA 59.159 50.000 0.00 0.00 38.58 3.07
636 3200 1.423921 TGGATGCTGCCTGATCATCAT 59.576 47.619 0.00 0.00 38.58 2.45
637 3201 2.085320 GGATGCTGCCTGATCATCATC 58.915 52.381 0.00 4.93 38.30 2.92
638 3202 2.552373 GGATGCTGCCTGATCATCATCA 60.552 50.000 16.55 11.49 39.84 3.07
639 3203 2.721425 TGCTGCCTGATCATCATCAA 57.279 45.000 0.00 0.00 38.63 2.57
640 3204 3.007473 TGCTGCCTGATCATCATCAAA 57.993 42.857 0.00 0.00 38.63 2.69
641 3205 3.358118 TGCTGCCTGATCATCATCAAAA 58.642 40.909 0.00 0.00 38.63 2.44
642 3206 3.764972 TGCTGCCTGATCATCATCAAAAA 59.235 39.130 0.00 0.00 38.63 1.94
643 3207 4.110482 GCTGCCTGATCATCATCAAAAAC 58.890 43.478 0.00 0.00 38.63 2.43
644 3208 4.381185 GCTGCCTGATCATCATCAAAAACA 60.381 41.667 0.00 0.00 38.63 2.83
645 3209 5.716094 CTGCCTGATCATCATCAAAAACAA 58.284 37.500 0.00 0.00 38.63 2.83
646 3210 6.099159 TGCCTGATCATCATCAAAAACAAA 57.901 33.333 0.00 0.00 38.63 2.83
647 3211 6.160684 TGCCTGATCATCATCAAAAACAAAG 58.839 36.000 0.00 0.00 38.63 2.77
648 3212 6.161381 GCCTGATCATCATCAAAAACAAAGT 58.839 36.000 0.00 0.00 38.63 2.66
649 3213 7.039853 TGCCTGATCATCATCAAAAACAAAGTA 60.040 33.333 0.00 0.00 38.63 2.24
650 3214 7.814107 GCCTGATCATCATCAAAAACAAAGTAA 59.186 33.333 0.00 0.00 38.63 2.24
651 3215 9.865321 CCTGATCATCATCAAAAACAAAGTAAT 57.135 29.630 0.00 0.00 38.63 1.89
653 3217 9.859427 TGATCATCATCAAAAACAAAGTAATCC 57.141 29.630 0.00 0.00 35.99 3.01
654 3218 9.859427 GATCATCATCAAAAACAAAGTAATCCA 57.141 29.630 0.00 0.00 0.00 3.41
659 3223 9.883142 TCATCAAAAACAAAGTAATCCAAAACT 57.117 25.926 0.00 0.00 0.00 2.66
671 3235 7.165485 AGTAATCCAAAACTTTATTTTGCCCC 58.835 34.615 6.60 0.00 37.89 5.80
697 3261 2.311542 AGCATTCCACCAAATCCACCTA 59.688 45.455 0.00 0.00 0.00 3.08
698 3262 2.427095 GCATTCCACCAAATCCACCTAC 59.573 50.000 0.00 0.00 0.00 3.18
719 3284 2.159338 CGTGAAAGGGCCAAATCTCATG 60.159 50.000 6.18 2.34 0.00 3.07
720 3285 2.827921 GTGAAAGGGCCAAATCTCATGT 59.172 45.455 6.18 0.00 0.00 3.21
721 3286 2.827322 TGAAAGGGCCAAATCTCATGTG 59.173 45.455 6.18 0.00 0.00 3.21
722 3287 2.905415 AAGGGCCAAATCTCATGTGA 57.095 45.000 6.18 0.00 0.00 3.58
724 3289 2.450476 AGGGCCAAATCTCATGTGAAC 58.550 47.619 6.18 0.00 0.00 3.18
725 3290 2.170166 GGGCCAAATCTCATGTGAACA 58.830 47.619 4.39 0.00 0.00 3.18
726 3291 2.562298 GGGCCAAATCTCATGTGAACAA 59.438 45.455 4.39 0.00 0.00 2.83
727 3292 3.367703 GGGCCAAATCTCATGTGAACAAG 60.368 47.826 4.39 0.00 0.00 3.16
729 3294 4.380233 GGCCAAATCTCATGTGAACAAGAG 60.380 45.833 8.95 8.95 41.54 2.85
739 3316 2.243736 TGTGAACAAGAGAAAAGGGGGT 59.756 45.455 0.00 0.00 0.00 4.95
747 3324 4.749048 AGAGAAAAGGGGGTCAAATCTT 57.251 40.909 0.00 0.00 0.00 2.40
749 3326 4.835056 AGAGAAAAGGGGGTCAAATCTTTG 59.165 41.667 0.00 0.00 39.48 2.77
764 3341 6.425114 TCAAATCTTTGTTTCTCGAGGAAGAG 59.575 38.462 13.56 8.65 39.18 2.85
767 3344 0.608640 TGTTTCTCGAGGAAGAGGGC 59.391 55.000 13.56 0.00 38.71 5.19
771 3348 1.153745 CTCGAGGAAGAGGGCGTTG 60.154 63.158 3.91 0.00 34.74 4.10
824 3401 2.178273 GCGACAAATTGCCCCGAC 59.822 61.111 7.09 0.00 0.00 4.79
843 3420 6.148315 CCCCGACTTAGTTTTAGGTTAACAAG 59.852 42.308 8.10 2.48 0.00 3.16
876 3453 3.181434 TGCTTCCTGTACCAAGACCATTT 60.181 43.478 0.00 0.00 0.00 2.32
877 3454 4.042311 TGCTTCCTGTACCAAGACCATTTA 59.958 41.667 0.00 0.00 0.00 1.40
878 3455 4.395231 GCTTCCTGTACCAAGACCATTTAC 59.605 45.833 0.00 0.00 0.00 2.01
879 3456 5.556915 CTTCCTGTACCAAGACCATTTACA 58.443 41.667 0.00 0.00 0.00 2.41
880 3457 5.570205 TCCTGTACCAAGACCATTTACAA 57.430 39.130 0.00 0.00 0.00 2.41
881 3458 5.942961 TCCTGTACCAAGACCATTTACAAA 58.057 37.500 0.00 0.00 0.00 2.83
955 3537 2.110006 GAGAGCCCGCATTCCCTC 59.890 66.667 0.00 0.00 0.00 4.30
1070 3674 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
1071 3675 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
1072 3676 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
1073 3677 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
1074 3678 4.548513 CCCTCCCTCCCTCCCTCG 62.549 77.778 0.00 0.00 0.00 4.63
1077 3681 4.144727 TCCCTCCCTCCCTCGCTC 62.145 72.222 0.00 0.00 0.00 5.03
1080 3684 4.150454 CTCCCTCCCTCGCTCCCT 62.150 72.222 0.00 0.00 0.00 4.20
1091 3695 3.394836 GCTCCCTCCGCTCCTGTT 61.395 66.667 0.00 0.00 0.00 3.16
1092 3696 2.960688 GCTCCCTCCGCTCCTGTTT 61.961 63.158 0.00 0.00 0.00 2.83
1093 3697 1.219393 CTCCCTCCGCTCCTGTTTC 59.781 63.158 0.00 0.00 0.00 2.78
1094 3698 1.229209 TCCCTCCGCTCCTGTTTCT 60.229 57.895 0.00 0.00 0.00 2.52
1095 3699 1.219393 CCCTCCGCTCCTGTTTCTC 59.781 63.158 0.00 0.00 0.00 2.87
1096 3700 1.153745 CCTCCGCTCCTGTTTCTCG 60.154 63.158 0.00 0.00 0.00 4.04
1097 3701 1.807573 CTCCGCTCCTGTTTCTCGC 60.808 63.158 0.00 0.00 0.00 5.03
1098 3702 2.815647 CCGCTCCTGTTTCTCGCC 60.816 66.667 0.00 0.00 0.00 5.54
1099 3703 2.262915 CGCTCCTGTTTCTCGCCT 59.737 61.111 0.00 0.00 0.00 5.52
1114 3718 4.152647 TCTCGCCTATGTATCCATGTTCT 58.847 43.478 0.00 0.00 32.29 3.01
1130 3734 1.134699 GTTCTGGGTGATCTGATGCGA 60.135 52.381 0.00 0.00 0.00 5.10
1176 3780 4.992511 CGGGTGGTTTCCGCGGAA 62.993 66.667 35.81 35.81 41.07 4.30
1177 3781 3.359523 GGGTGGTTTCCGCGGAAC 61.360 66.667 38.87 29.97 34.37 3.62
1194 3798 2.075355 AACGGGCTTGGTTCCATGGA 62.075 55.000 11.44 11.44 0.00 3.41
1205 3809 2.421529 GGTTCCATGGAGGCGATTTACT 60.422 50.000 15.53 0.00 37.29 2.24
1206 3810 3.181458 GGTTCCATGGAGGCGATTTACTA 60.181 47.826 15.53 0.00 37.29 1.82
1208 3812 4.974645 TCCATGGAGGCGATTTACTATT 57.025 40.909 11.44 0.00 37.29 1.73
1209 3813 5.304686 TCCATGGAGGCGATTTACTATTT 57.695 39.130 11.44 0.00 37.29 1.40
1211 3824 6.126409 TCCATGGAGGCGATTTACTATTTTT 58.874 36.000 11.44 0.00 37.29 1.94
1234 3847 2.704725 TTCCTGCGAAAGTGATTTGC 57.295 45.000 0.00 0.00 46.90 3.68
1235 3848 1.896220 TCCTGCGAAAGTGATTTGCT 58.104 45.000 2.44 0.00 46.85 3.91
1236 3849 1.536766 TCCTGCGAAAGTGATTTGCTG 59.463 47.619 2.44 1.98 46.85 4.41
1237 3850 1.334054 CTGCGAAAGTGATTTGCTGC 58.666 50.000 0.00 0.00 46.85 5.25
1244 3857 3.863142 AAGTGATTTGCTGCATCTTCC 57.137 42.857 1.84 0.00 0.00 3.46
1250 3863 0.250252 TTGCTGCATCTTCCACGTCA 60.250 50.000 1.84 0.00 0.00 4.35
1259 3872 3.529341 TTCCACGTCACCTGCGCAT 62.529 57.895 12.24 0.00 0.00 4.73
1261 3874 1.739929 CCACGTCACCTGCGCATAA 60.740 57.895 12.24 0.00 0.00 1.90
1262 3875 1.089481 CCACGTCACCTGCGCATAAT 61.089 55.000 12.24 0.00 0.00 1.28
1263 3876 0.726827 CACGTCACCTGCGCATAATT 59.273 50.000 12.24 0.00 0.00 1.40
1264 3877 1.130373 CACGTCACCTGCGCATAATTT 59.870 47.619 12.24 0.00 0.00 1.82
1265 3878 1.130373 ACGTCACCTGCGCATAATTTG 59.870 47.619 12.24 3.92 0.00 2.32
1266 3879 1.130373 CGTCACCTGCGCATAATTTGT 59.870 47.619 12.24 0.00 0.00 2.83
1267 3880 2.414029 CGTCACCTGCGCATAATTTGTT 60.414 45.455 12.24 0.00 0.00 2.83
1268 3881 3.574614 GTCACCTGCGCATAATTTGTTT 58.425 40.909 12.24 0.00 0.00 2.83
1269 3882 3.608073 GTCACCTGCGCATAATTTGTTTC 59.392 43.478 12.24 0.00 0.00 2.78
1270 3883 2.923020 CACCTGCGCATAATTTGTTTCC 59.077 45.455 12.24 0.00 0.00 3.13
1271 3884 2.560542 ACCTGCGCATAATTTGTTTCCA 59.439 40.909 12.24 0.00 0.00 3.53
1272 3885 3.006323 ACCTGCGCATAATTTGTTTCCAA 59.994 39.130 12.24 0.00 0.00 3.53
1273 3886 4.183101 CCTGCGCATAATTTGTTTCCAAT 58.817 39.130 12.24 0.00 0.00 3.16
1274 3887 4.630940 CCTGCGCATAATTTGTTTCCAATT 59.369 37.500 12.24 0.00 0.00 2.32
1275 3888 5.446206 CCTGCGCATAATTTGTTTCCAATTG 60.446 40.000 12.24 0.00 0.00 2.32
1276 3889 5.233225 TGCGCATAATTTGTTTCCAATTGA 58.767 33.333 5.66 0.00 0.00 2.57
1277 3890 5.348179 TGCGCATAATTTGTTTCCAATTGAG 59.652 36.000 5.66 0.00 0.00 3.02
1278 3891 5.576384 GCGCATAATTTGTTTCCAATTGAGA 59.424 36.000 7.12 0.00 0.00 3.27
1279 3892 6.237648 GCGCATAATTTGTTTCCAATTGAGAG 60.238 38.462 7.12 0.00 0.00 3.20
1280 3893 6.254157 CGCATAATTTGTTTCCAATTGAGAGG 59.746 38.462 7.12 0.00 0.00 3.69
1291 3904 9.076596 GTTTCCAATTGAGAGGATTTATTTTCG 57.923 33.333 7.12 0.00 33.10 3.46
1304 3917 6.193959 GGATTTATTTTCGTCGGATCGTTTTG 59.806 38.462 0.00 0.00 0.00 2.44
1308 3921 2.089936 CGTCGGATCGTTTTGCGGA 61.090 57.895 0.00 0.00 41.72 5.54
1309 3922 1.418342 CGTCGGATCGTTTTGCGGAT 61.418 55.000 0.00 0.00 41.72 4.18
1310 3923 0.026285 GTCGGATCGTTTTGCGGATG 59.974 55.000 0.00 0.00 41.72 3.51
1311 3924 1.297598 CGGATCGTTTTGCGGATGC 60.298 57.895 0.00 0.00 41.72 3.91
1345 3968 2.036217 TGATTTTGACGTCGTGTAGGGT 59.964 45.455 11.62 0.00 0.00 4.34
1349 3972 1.154338 GACGTCGTGTAGGGTCGTG 60.154 63.158 0.63 0.00 34.93 4.35
1416 4049 2.767505 AGAGGATTGTTGAACCGTGAC 58.232 47.619 0.00 0.00 0.00 3.67
1422 4055 0.531090 TGTTGAACCGTGACGAAGGG 60.531 55.000 6.54 0.00 39.88 3.95
1465 4098 3.241067 TCGTACTACCAGATTGTTGCC 57.759 47.619 0.00 0.00 0.00 4.52
1466 4099 2.829720 TCGTACTACCAGATTGTTGCCT 59.170 45.455 0.00 0.00 0.00 4.75
1467 4100 3.259876 TCGTACTACCAGATTGTTGCCTT 59.740 43.478 0.00 0.00 0.00 4.35
1482 4115 1.241315 GCCTTTTGCTCCCACGCTTA 61.241 55.000 0.00 0.00 36.87 3.09
1497 4130 4.321675 CCACGCTTAGTTTTGGCCTTATTT 60.322 41.667 3.32 0.00 0.00 1.40
1516 4149 4.365514 TTTGGCAGAGTTGAGGTTGATA 57.634 40.909 0.00 0.00 0.00 2.15
1534 4167 8.705048 GGTTGATAATTTCTAGATATCGACCC 57.295 38.462 25.56 15.49 46.17 4.46
1542 4175 4.883083 TCTAGATATCGACCCAAACATGC 58.117 43.478 0.00 0.00 0.00 4.06
1546 4179 1.838112 ATCGACCCAAACATGCATGT 58.162 45.000 26.61 26.61 44.20 3.21
1586 4223 8.723311 CGAGTTGTTGGTATGGTTAAGAAATTA 58.277 33.333 0.00 0.00 0.00 1.40
1589 4226 9.634163 GTTGTTGGTATGGTTAAGAAATTAAGG 57.366 33.333 0.00 0.00 0.00 2.69
1590 4227 9.589461 TTGTTGGTATGGTTAAGAAATTAAGGA 57.411 29.630 0.00 0.00 0.00 3.36
1591 4228 9.589461 TGTTGGTATGGTTAAGAAATTAAGGAA 57.411 29.630 0.00 0.00 0.00 3.36
1662 4366 6.719829 TCATTGACCTGTTTGAGTAGACTAGA 59.280 38.462 0.00 0.00 0.00 2.43
1664 4368 5.010933 TGACCTGTTTGAGTAGACTAGAGG 58.989 45.833 0.00 0.00 0.00 3.69
1669 4373 6.015350 CCTGTTTGAGTAGACTAGAGGTCAAA 60.015 42.308 0.00 1.97 46.72 2.69
1680 4384 1.535462 AGAGGTCAAATTTTCACGCGG 59.465 47.619 12.47 0.00 0.00 6.46
1717 4430 7.178573 TCCAATGTAGATTTGTACCCATTTCA 58.821 34.615 0.00 0.00 0.00 2.69
1732 4445 5.009631 CCCATTTCAGTGATCTGTTAACCA 58.990 41.667 2.48 0.00 41.91 3.67
1742 4455 9.268268 CAGTGATCTGTTAACCAGTTTAGTTTA 57.732 33.333 2.48 0.00 42.19 2.01
1862 4617 7.225341 CGTTAAGTAGGTCAACTAAACTGGTTT 59.775 37.037 4.15 4.15 36.63 3.27
1896 4654 5.010516 TGTCTAGGAGAGCTTGCAAGATATC 59.989 44.000 30.39 28.44 32.29 1.63
1953 4711 4.634012 TGTAAGCTCAGTACCCAAATGT 57.366 40.909 0.00 0.00 0.00 2.71
1988 4747 5.538118 TGTATGAATATTCGGCGATCTGTT 58.462 37.500 11.76 6.03 0.00 3.16
1991 4750 5.900339 TGAATATTCGGCGATCTGTTAAC 57.100 39.130 11.76 0.00 0.00 2.01
1992 4751 5.597806 TGAATATTCGGCGATCTGTTAACT 58.402 37.500 11.76 0.00 0.00 2.24
1993 4752 6.741109 TGAATATTCGGCGATCTGTTAACTA 58.259 36.000 11.76 0.00 0.00 2.24
1994 4753 6.639686 TGAATATTCGGCGATCTGTTAACTAC 59.360 38.462 11.76 0.00 0.00 2.73
1995 4754 4.650754 ATTCGGCGATCTGTTAACTACT 57.349 40.909 11.76 0.00 0.00 2.57
1996 4755 3.687572 TCGGCGATCTGTTAACTACTC 57.312 47.619 4.99 0.07 0.00 2.59
2055 4814 0.451783 CACTAGGATTTGGTTGCCGC 59.548 55.000 0.00 0.00 0.00 6.53
2073 4832 1.092345 GCGGAGGAGATTTGCTGTCC 61.092 60.000 0.00 0.00 37.58 4.02
2076 4835 1.407989 GGAGGAGATTTGCTGTCCCTG 60.408 57.143 0.00 0.00 38.08 4.45
2084 4843 1.468506 TTGCTGTCCCTGCTACGTCA 61.469 55.000 0.00 0.00 0.00 4.35
2132 4891 5.710099 TCAAAGCCTTTATTTCCGTCAGATT 59.290 36.000 0.00 0.00 0.00 2.40
2166 4935 2.746279 AGGTGTGGTGGATTTTGACA 57.254 45.000 0.00 0.00 0.00 3.58
2188 4957 8.933653 TGACATCATATGGGTTGTAGAGATTTA 58.066 33.333 2.13 0.00 33.60 1.40
2211 4980 9.793259 TTTAGTCCTTTTTGTGTCAGATAATCT 57.207 29.630 0.00 0.00 0.00 2.40
2309 5080 3.119291 GACGATCAGAGTACATGCCAAG 58.881 50.000 0.00 0.00 0.00 3.61
2338 5109 6.699366 TGCTTGCTTCCATAATTGATTTTGA 58.301 32.000 0.00 0.00 0.00 2.69
2420 5191 3.115554 GCAAAGTGAATGCGAGTTGTTT 58.884 40.909 0.00 0.00 33.57 2.83
2444 5215 9.928618 TTTATATGATTTACACATTTGGGGAGA 57.071 29.630 0.00 0.00 0.00 3.71
2445 5216 9.928618 TTATATGATTTACACATTTGGGGAGAA 57.071 29.630 0.00 0.00 0.00 2.87
2532 5303 5.938125 TGTCTGAAACTTAATCTTGTAGCCC 59.062 40.000 0.00 0.00 0.00 5.19
2572 5351 2.175878 AAGCAGACAGAGTTTCGCAT 57.824 45.000 0.00 0.00 0.00 4.73
2582 5361 3.433274 CAGAGTTTCGCATGTAAGCTGAA 59.567 43.478 4.49 0.00 0.00 3.02
2623 5402 2.732500 CCTGTTGTACGCATGTTCGTTA 59.267 45.455 3.70 0.00 43.15 3.18
2631 5410 4.742438 ACGCATGTTCGTTAATCTGTTT 57.258 36.364 0.00 0.00 40.07 2.83
2685 5464 8.394971 TGATGTTTGAATCAACTGTAAGATGT 57.605 30.769 0.00 0.00 38.02 3.06
2692 5471 8.703604 TGAATCAACTGTAAGATGTAGTAAGC 57.296 34.615 0.00 0.00 38.02 3.09
2759 5538 6.949578 ACATCCATTTACTTTCAAAATGCG 57.050 33.333 3.57 0.00 41.11 4.73
2764 5543 1.680668 TACTTTCAAAATGCGCGTGC 58.319 45.000 15.48 15.48 43.20 5.34
2815 5594 1.004745 AGGGTAATCCAACTGTGCCAG 59.995 52.381 1.16 1.16 38.24 4.85
2833 5612 3.254060 CCAGACGGTCATGTTTCTGTAG 58.746 50.000 11.27 4.72 34.79 2.74
2838 5617 5.236478 AGACGGTCATGTTTCTGTAGTTTTG 59.764 40.000 11.27 0.00 0.00 2.44
2881 5660 4.442375 AGACGATCGAGTTCTTCACATT 57.558 40.909 24.34 0.00 0.00 2.71
2955 5734 5.745227 TGGGAAATTTTGTTTTTGCCACTA 58.255 33.333 5.43 0.00 45.87 2.74
2956 5735 5.586643 TGGGAAATTTTGTTTTTGCCACTAC 59.413 36.000 5.43 0.00 45.87 2.73
2957 5736 5.586643 GGGAAATTTTGTTTTTGCCACTACA 59.413 36.000 0.00 0.00 42.31 2.74
3039 5827 4.045636 CACTGCTTAGTGCCAAAAACTT 57.954 40.909 0.00 0.00 42.00 2.66
3046 5834 7.145323 TGCTTAGTGCCAAAAACTTATTTCTC 58.855 34.615 0.00 0.00 42.00 2.87
3103 5891 7.279981 AGTTTCCCTTTGTTCATTTACTTTTGC 59.720 33.333 0.00 0.00 0.00 3.68
3124 5912 5.719173 TGCATGCTTAAATTTGGTAGGTTC 58.281 37.500 20.33 0.00 0.00 3.62
3238 6026 9.857957 GTTAGTAGCTCTACAGATGTTACTTTT 57.142 33.333 9.44 0.00 38.48 2.27
3260 6056 8.973835 TTTTGAAGTTGGTTACTGTTAGTTTG 57.026 30.769 0.00 0.00 37.12 2.93
3264 6060 6.131544 AGTTGGTTACTGTTAGTTTGCTTG 57.868 37.500 0.00 0.00 35.19 4.01
3421 6217 8.085909 ACTTTATTGTATTTAGTTGGTGGTTGC 58.914 33.333 0.00 0.00 0.00 4.17
3425 6221 5.871834 TGTATTTAGTTGGTGGTTGCTACT 58.128 37.500 0.00 0.00 0.00 2.57
3426 6222 5.935789 TGTATTTAGTTGGTGGTTGCTACTC 59.064 40.000 0.00 0.00 0.00 2.59
3428 6224 0.400594 AGTTGGTGGTTGCTACTCCC 59.599 55.000 0.00 0.00 0.00 4.30
3430 6226 0.690762 TTGGTGGTTGCTACTCCCTC 59.309 55.000 0.00 0.00 0.00 4.30
3431 6227 1.198759 TGGTGGTTGCTACTCCCTCC 61.199 60.000 0.00 0.00 33.46 4.30
3432 6228 1.218316 GTGGTTGCTACTCCCTCCG 59.782 63.158 0.00 0.00 0.00 4.63
3433 6229 1.229082 TGGTTGCTACTCCCTCCGT 60.229 57.895 0.00 0.00 0.00 4.69
3434 6230 0.040058 TGGTTGCTACTCCCTCCGTA 59.960 55.000 0.00 0.00 0.00 4.02
3435 6231 1.188863 GGTTGCTACTCCCTCCGTAA 58.811 55.000 0.00 0.00 0.00 3.18
3436 6232 1.551883 GGTTGCTACTCCCTCCGTAAA 59.448 52.381 0.00 0.00 0.00 2.01
3437 6233 2.614779 GTTGCTACTCCCTCCGTAAAC 58.385 52.381 0.00 0.00 0.00 2.01
3438 6234 2.226962 TGCTACTCCCTCCGTAAACT 57.773 50.000 0.00 0.00 0.00 2.66
3439 6235 3.370840 TGCTACTCCCTCCGTAAACTA 57.629 47.619 0.00 0.00 0.00 2.24
3440 6236 3.700538 TGCTACTCCCTCCGTAAACTAA 58.299 45.455 0.00 0.00 0.00 2.24
3441 6237 4.284178 TGCTACTCCCTCCGTAAACTAAT 58.716 43.478 0.00 0.00 0.00 1.73
3442 6238 5.448654 TGCTACTCCCTCCGTAAACTAATA 58.551 41.667 0.00 0.00 0.00 0.98
3443 6239 6.073314 TGCTACTCCCTCCGTAAACTAATAT 58.927 40.000 0.00 0.00 0.00 1.28
3444 6240 7.233632 TGCTACTCCCTCCGTAAACTAATATA 58.766 38.462 0.00 0.00 0.00 0.86
3445 6241 7.725397 TGCTACTCCCTCCGTAAACTAATATAA 59.275 37.037 0.00 0.00 0.00 0.98
3446 6242 8.242739 GCTACTCCCTCCGTAAACTAATATAAG 58.757 40.741 0.00 0.00 0.00 1.73
3447 6243 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
3448 6244 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
3449 6245 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
3450 6246 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
3451 6247 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
3452 6248 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
3453 6249 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
3454 6250 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
3455 6251 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
3456 6252 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
3470 6266 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
3471 6267 8.738106 AGAGCGTTTAGATTACTAAAGTAGTGT 58.262 33.333 0.00 0.00 45.42 3.55
3472 6268 9.351570 GAGCGTTTAGATTACTAAAGTAGTGTT 57.648 33.333 0.00 0.00 45.42 3.32
3473 6269 9.351570 AGCGTTTAGATTACTAAAGTAGTGTTC 57.648 33.333 0.00 0.00 45.42 3.18
3474 6270 9.351570 GCGTTTAGATTACTAAAGTAGTGTTCT 57.648 33.333 0.00 3.55 45.42 3.01
3480 6276 9.351570 AGATTACTAAAGTAGTGTTCTAAACGC 57.648 33.333 0.00 0.00 39.81 4.84
3501 6297 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
3502 6298 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
3503 6299 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
3504 6300 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
3505 6301 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
3676 6473 6.805016 ATATCAGCCCTGTAGAGGATATTG 57.195 41.667 7.68 0.44 42.93 1.90
3680 6477 5.954752 TCAGCCCTGTAGAGGATATTGATAG 59.045 44.000 7.68 0.00 42.93 2.08
3830 6627 1.123861 TGCACCTGCCTCTCTCTGTT 61.124 55.000 0.00 0.00 41.18 3.16
3971 6768 8.837099 TCATTCATTCCCATTTTAATACCTGT 57.163 30.769 0.00 0.00 0.00 4.00
4116 6913 3.558418 GCCATCCATGCATTTTGTGATTC 59.442 43.478 0.00 0.00 0.00 2.52
4172 6969 7.026631 TCAATTGTGTATTTAGCAGTATGGC 57.973 36.000 5.13 0.00 35.86 4.40
4245 7042 4.164604 ACACTGTTACTCCAGGTACCAAAA 59.835 41.667 15.94 0.00 36.75 2.44
4355 7152 3.841255 CTCCTCCAGAGAAACCTAAGGTT 59.159 47.826 0.00 0.00 46.50 3.50
4772 7569 4.677182 ACTTGCCCAAATTTCTCCACTAT 58.323 39.130 0.00 0.00 0.00 2.12
4781 7578 9.359653 CCCAAATTTCTCCACTATCATTATTCT 57.640 33.333 0.00 0.00 0.00 2.40
4811 7608 4.552883 TGTCCCTCTCCATTATGTCCTA 57.447 45.455 0.00 0.00 0.00 2.94
4925 7722 8.784043 GTTATGCTCCAAAATAATTAGTCGGAT 58.216 33.333 4.93 0.00 0.00 4.18
5000 7889 7.607607 TGTGCTTATCTTCTAATGCTTTCTTGA 59.392 33.333 0.00 0.00 0.00 3.02
5101 7990 6.602410 TGCATTAGGACCAATTTGATGAAA 57.398 33.333 0.00 0.00 0.00 2.69
5155 8044 0.609662 AGCATGGTGTCAAATTGGGC 59.390 50.000 0.00 0.00 0.00 5.36
5230 8120 4.186077 TGTTTGGTAATTTCCTGGGTCA 57.814 40.909 2.53 0.00 0.00 4.02
5401 8293 7.603024 ACCTTTTCTTCTCTAGGTTGAATTACG 59.397 37.037 0.00 0.00 37.75 3.18
5404 8296 6.845758 TCTTCTCTAGGTTGAATTACGGAA 57.154 37.500 0.00 0.00 0.00 4.30
5461 8353 7.095523 TGCTGTCATAATGTGATATGAATGTCG 60.096 37.037 0.00 0.00 42.34 4.35
5464 8356 8.764287 TGTCATAATGTGATATGAATGTCGTTC 58.236 33.333 0.00 0.00 42.34 3.95
5508 8400 4.501571 CCTGTTATCCGTGATACAGAAGGG 60.502 50.000 16.01 0.00 31.67 3.95
5619 8511 3.208747 ACCTTCACAATCTCAAACGGT 57.791 42.857 0.00 0.00 0.00 4.83
5697 8589 1.961793 TGTTTGCTGCCTTCTACGTT 58.038 45.000 0.00 0.00 0.00 3.99
5754 8647 5.014202 TCAACCCTTAATTCCTTGCCTAAC 58.986 41.667 0.00 0.00 0.00 2.34
5954 8847 5.426833 AGGTTGCTCCTTGACATATAGTTCT 59.573 40.000 0.00 0.00 45.67 3.01
5955 8848 5.525378 GGTTGCTCCTTGACATATAGTTCTG 59.475 44.000 0.00 0.00 0.00 3.02
5985 8879 4.202567 ACTTCTGGGGTAAAGATTGCTTCA 60.203 41.667 0.00 0.00 31.82 3.02
6081 8975 1.630369 TGCTGGCCTCTGAATTGTAGT 59.370 47.619 3.32 0.00 0.00 2.73
6100 8995 8.596271 TTGTAGTAGAAACATCAACGAATTCA 57.404 30.769 6.22 0.00 0.00 2.57
6106 9001 7.219484 AGAAACATCAACGAATTCATTTCCT 57.781 32.000 6.22 0.00 0.00 3.36
6118 9013 7.147976 CGAATTCATTTCCTTTTTCTGAGGTT 58.852 34.615 6.22 0.00 35.71 3.50
6178 9073 8.607441 TTATGATCTACAATAGCAATGGACAC 57.393 34.615 0.00 0.00 0.00 3.67
6191 9090 2.341846 TGGACACCCTCAACTTTGTC 57.658 50.000 0.00 0.00 38.11 3.18
6207 9106 0.236187 TGTCGTGCCATTTAACGTGC 59.764 50.000 0.00 0.00 40.61 5.34
6215 9117 5.619607 CGTGCCATTTAACGTGCTAATTATC 59.380 40.000 0.00 0.00 35.13 1.75
6216 9118 6.511121 CGTGCCATTTAACGTGCTAATTATCT 60.511 38.462 0.00 0.00 35.13 1.98
6234 9136 1.960689 TCTCATGTGACGTCTGGTTGA 59.039 47.619 17.92 12.78 0.00 3.18
6236 9138 3.006859 TCTCATGTGACGTCTGGTTGATT 59.993 43.478 17.92 0.00 0.00 2.57
6237 9139 3.066380 TCATGTGACGTCTGGTTGATTG 58.934 45.455 17.92 3.70 0.00 2.67
6238 9140 1.877637 TGTGACGTCTGGTTGATTGG 58.122 50.000 17.92 0.00 0.00 3.16
6239 9141 1.140052 TGTGACGTCTGGTTGATTGGT 59.860 47.619 17.92 0.00 0.00 3.67
6240 9142 2.365941 TGTGACGTCTGGTTGATTGGTA 59.634 45.455 17.92 0.00 0.00 3.25
6241 9143 3.007506 TGTGACGTCTGGTTGATTGGTAT 59.992 43.478 17.92 0.00 0.00 2.73
6242 9144 3.617263 GTGACGTCTGGTTGATTGGTATC 59.383 47.826 17.92 0.00 0.00 2.24
6243 9145 3.259625 TGACGTCTGGTTGATTGGTATCA 59.740 43.478 17.92 0.00 39.00 2.15
6244 9146 3.861840 ACGTCTGGTTGATTGGTATCAG 58.138 45.455 0.00 0.00 41.60 2.90
6245 9147 3.198068 CGTCTGGTTGATTGGTATCAGG 58.802 50.000 0.00 0.00 41.60 3.86
6246 9148 2.945668 GTCTGGTTGATTGGTATCAGGC 59.054 50.000 0.00 0.00 41.60 4.85
6247 9149 2.575735 TCTGGTTGATTGGTATCAGGCA 59.424 45.455 0.00 0.00 41.60 4.75
6248 9150 2.947652 CTGGTTGATTGGTATCAGGCAG 59.052 50.000 0.00 0.00 41.60 4.85
6258 9160 0.618680 TATCAGGCAGAGGCAGGTGT 60.619 55.000 0.00 0.00 43.71 4.16
6265 9167 1.081892 CAGAGGCAGGTGTTTGATCG 58.918 55.000 0.00 0.00 0.00 3.69
6302 9204 9.143155 AGTGTATTTTCCACCTTTACAATTTCT 57.857 29.630 0.00 0.00 33.20 2.52
6310 9212 9.990360 TTCCACCTTTACAATTTCTAAATTTCC 57.010 29.630 0.00 0.00 36.52 3.13
6313 9215 8.925700 CACCTTTACAATTTCTAAATTTCCAGC 58.074 33.333 0.00 0.00 36.52 4.85
6314 9216 7.812669 ACCTTTACAATTTCTAAATTTCCAGCG 59.187 33.333 0.00 0.00 36.52 5.18
6334 9236 0.669619 TGGTGCAATTGCTGTGTCTG 59.330 50.000 29.37 0.00 42.66 3.51
6339 9241 1.990563 GCAATTGCTGTGTCTGAATGC 59.009 47.619 23.21 0.00 38.21 3.56
6348 9250 2.028112 TGTGTCTGAATGCCCAGTAGAC 60.028 50.000 0.00 0.00 38.52 2.59
6354 9256 2.846206 TGAATGCCCAGTAGACTTCCAT 59.154 45.455 0.00 0.00 0.00 3.41
6390 9292 5.595952 AGCTTTTGAAGTTTCTCAGGTCATT 59.404 36.000 0.00 0.00 0.00 2.57
6414 9322 5.525745 TCTTTTCGCATTCTAGTGACACAAA 59.474 36.000 8.59 0.00 0.00 2.83
6421 9329 3.764237 TCTAGTGACACAAAGTTCCCC 57.236 47.619 8.59 0.00 0.00 4.81
6436 9344 2.623416 GTTCCCCTTGAAGTTTGAGTGG 59.377 50.000 0.00 0.00 32.37 4.00
6448 9356 3.071602 AGTTTGAGTGGAGTGCACTGTAT 59.928 43.478 27.27 7.16 32.33 2.29
6460 9368 5.238583 AGTGCACTGTATGTCCTTAAACTC 58.761 41.667 20.97 0.00 0.00 3.01
6508 9416 8.615211 CCTCGAACTATGAAAATCATCATTCAA 58.385 33.333 12.92 0.30 40.44 2.69
6518 9426 7.337689 TGAAAATCATCATTCAAGTCCTCGAAT 59.662 33.333 0.00 0.00 32.89 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 1.885887 GTAGGAGCCACATTGTTTGCA 59.114 47.619 9.91 0.00 0.00 4.08
104 105 3.122948 CAGCAGCATTTTGACAGCATTTC 59.877 43.478 0.00 0.00 0.00 2.17
106 107 2.297880 TCAGCAGCATTTTGACAGCATT 59.702 40.909 0.00 0.00 0.00 3.56
107 108 1.890489 TCAGCAGCATTTTGACAGCAT 59.110 42.857 0.00 0.00 0.00 3.79
109 110 2.427232 TTCAGCAGCATTTTGACAGC 57.573 45.000 0.00 0.00 0.00 4.40
143 2707 6.487331 AGCATCATTTTGAAAAATTCCAGCAA 59.513 30.769 0.00 0.00 36.52 3.91
206 2770 6.515272 AACATCACCAACTCAACATAATCC 57.485 37.500 0.00 0.00 0.00 3.01
238 2802 4.512571 GTGCAACATTTCAGAAGCCAATTT 59.487 37.500 0.00 0.00 36.32 1.82
247 2811 5.939883 AGCAACTATAGTGCAACATTTCAGA 59.060 36.000 21.50 0.00 41.43 3.27
303 2867 7.597327 AGACTTCTATACCCTTACCTCTTCAT 58.403 38.462 0.00 0.00 0.00 2.57
480 3044 5.228220 CGTTTGCGAACACTTTTATGACAAA 59.772 36.000 16.98 0.00 41.33 2.83
481 3045 4.731000 CGTTTGCGAACACTTTTATGACAA 59.269 37.500 16.98 0.00 41.33 3.18
482 3046 4.201832 ACGTTTGCGAACACTTTTATGACA 60.202 37.500 16.98 0.00 42.00 3.58
483 3047 4.276460 ACGTTTGCGAACACTTTTATGAC 58.724 39.130 16.98 0.00 42.00 3.06
484 3048 4.034163 TGACGTTTGCGAACACTTTTATGA 59.966 37.500 16.98 0.00 42.00 2.15
485 3049 4.275662 TGACGTTTGCGAACACTTTTATG 58.724 39.130 16.98 0.52 42.00 1.90
486 3050 4.539509 TGACGTTTGCGAACACTTTTAT 57.460 36.364 16.98 0.00 42.00 1.40
487 3051 4.275662 CATGACGTTTGCGAACACTTTTA 58.724 39.130 16.98 0.00 42.00 1.52
488 3052 2.904011 TGACGTTTGCGAACACTTTT 57.096 40.000 16.98 0.00 42.00 2.27
489 3053 2.715268 CATGACGTTTGCGAACACTTT 58.285 42.857 16.98 0.00 42.00 2.66
490 3054 1.596954 GCATGACGTTTGCGAACACTT 60.597 47.619 16.98 5.77 42.00 3.16
491 3055 0.041312 GCATGACGTTTGCGAACACT 60.041 50.000 16.98 0.66 42.00 3.55
492 3056 0.996727 GGCATGACGTTTGCGAACAC 60.997 55.000 16.98 10.23 41.07 3.32
493 3057 1.163420 AGGCATGACGTTTGCGAACA 61.163 50.000 16.98 0.00 41.07 3.18
494 3058 0.452784 GAGGCATGACGTTTGCGAAC 60.453 55.000 15.49 6.77 41.07 3.95
495 3059 0.602638 AGAGGCATGACGTTTGCGAA 60.603 50.000 15.49 0.00 41.07 4.70
496 3060 1.005037 AGAGGCATGACGTTTGCGA 60.005 52.632 15.49 0.00 41.07 5.10
497 3061 1.421485 GAGAGGCATGACGTTTGCG 59.579 57.895 15.49 0.00 41.07 4.85
498 3062 1.421485 CGAGAGGCATGACGTTTGC 59.579 57.895 14.13 14.13 39.41 3.68
499 3063 1.421485 GCGAGAGGCATGACGTTTG 59.579 57.895 0.00 0.00 42.87 2.93
500 3064 3.876300 GCGAGAGGCATGACGTTT 58.124 55.556 0.00 0.00 42.87 3.60
509 3073 2.002127 CGAATGTTCAGCGAGAGGC 58.998 57.895 0.00 0.00 44.05 4.70
510 3074 0.737367 TGCGAATGTTCAGCGAGAGG 60.737 55.000 0.00 0.00 32.24 3.69
511 3075 1.060266 CTTGCGAATGTTCAGCGAGAG 59.940 52.381 15.48 6.85 38.91 3.20
512 3076 1.070821 CTTGCGAATGTTCAGCGAGA 58.929 50.000 15.48 0.00 38.91 4.04
513 3077 0.519999 GCTTGCGAATGTTCAGCGAG 60.520 55.000 15.90 15.90 39.25 5.03
514 3078 0.950555 AGCTTGCGAATGTTCAGCGA 60.951 50.000 0.00 0.00 32.24 4.93
515 3079 0.721154 TAGCTTGCGAATGTTCAGCG 59.279 50.000 0.00 0.00 32.24 5.18
516 3080 3.103738 CAATAGCTTGCGAATGTTCAGC 58.896 45.455 0.00 0.00 0.00 4.26
528 3092 0.861837 GATCGGACCGCAATAGCTTG 59.138 55.000 9.66 0.00 39.10 4.01
529 3093 0.464036 TGATCGGACCGCAATAGCTT 59.536 50.000 9.66 0.00 39.10 3.74
530 3094 0.681733 ATGATCGGACCGCAATAGCT 59.318 50.000 9.66 0.00 39.10 3.32
531 3095 1.071605 GATGATCGGACCGCAATAGC 58.928 55.000 9.66 0.00 37.42 2.97
532 3096 2.029918 TCTGATGATCGGACCGCAATAG 60.030 50.000 9.66 5.66 0.00 1.73
533 3097 1.960689 TCTGATGATCGGACCGCAATA 59.039 47.619 9.66 0.00 0.00 1.90
534 3098 0.752658 TCTGATGATCGGACCGCAAT 59.247 50.000 9.66 0.00 0.00 3.56
535 3099 0.534873 TTCTGATGATCGGACCGCAA 59.465 50.000 9.66 0.00 30.17 4.85
536 3100 0.534873 TTTCTGATGATCGGACCGCA 59.465 50.000 9.66 2.30 30.17 5.69
537 3101 1.651987 TTTTCTGATGATCGGACCGC 58.348 50.000 9.66 0.00 30.17 5.68
554 3118 7.979444 TCTCTGAAGATGGAATAACGTTTTT 57.021 32.000 5.91 4.54 0.00 1.94
555 3119 7.094762 GGTTCTCTGAAGATGGAATAACGTTTT 60.095 37.037 5.91 0.00 0.00 2.43
556 3120 6.371825 GGTTCTCTGAAGATGGAATAACGTTT 59.628 38.462 5.91 0.00 0.00 3.60
557 3121 5.875359 GGTTCTCTGAAGATGGAATAACGTT 59.125 40.000 5.88 5.88 0.00 3.99
558 3122 5.420409 GGTTCTCTGAAGATGGAATAACGT 58.580 41.667 0.00 0.00 0.00 3.99
559 3123 4.504461 CGGTTCTCTGAAGATGGAATAACG 59.496 45.833 0.00 0.00 0.00 3.18
560 3124 4.811557 CCGGTTCTCTGAAGATGGAATAAC 59.188 45.833 0.00 0.00 0.00 1.89
561 3125 4.683400 GCCGGTTCTCTGAAGATGGAATAA 60.683 45.833 1.90 0.00 0.00 1.40
562 3126 3.181465 GCCGGTTCTCTGAAGATGGAATA 60.181 47.826 1.90 0.00 0.00 1.75
563 3127 2.420687 GCCGGTTCTCTGAAGATGGAAT 60.421 50.000 1.90 0.00 0.00 3.01
564 3128 1.066143 GCCGGTTCTCTGAAGATGGAA 60.066 52.381 1.90 0.00 0.00 3.53
565 3129 0.537188 GCCGGTTCTCTGAAGATGGA 59.463 55.000 1.90 0.00 0.00 3.41
566 3130 0.250234 TGCCGGTTCTCTGAAGATGG 59.750 55.000 1.90 0.00 0.00 3.51
567 3131 1.205655 TCTGCCGGTTCTCTGAAGATG 59.794 52.381 1.90 0.00 0.00 2.90
568 3132 1.480137 CTCTGCCGGTTCTCTGAAGAT 59.520 52.381 1.90 0.00 0.00 2.40
569 3133 0.891373 CTCTGCCGGTTCTCTGAAGA 59.109 55.000 1.90 0.00 0.00 2.87
570 3134 0.108424 CCTCTGCCGGTTCTCTGAAG 60.108 60.000 1.90 0.00 0.00 3.02
571 3135 1.544825 CCCTCTGCCGGTTCTCTGAA 61.545 60.000 1.90 0.00 0.00 3.02
572 3136 1.984570 CCCTCTGCCGGTTCTCTGA 60.985 63.158 1.90 0.00 0.00 3.27
573 3137 2.581354 CCCTCTGCCGGTTCTCTG 59.419 66.667 1.90 0.00 0.00 3.35
574 3138 3.394836 GCCCTCTGCCGGTTCTCT 61.395 66.667 1.90 0.00 0.00 3.10
575 3139 1.686325 TATGCCCTCTGCCGGTTCTC 61.686 60.000 1.90 0.00 40.16 2.87
576 3140 1.056700 ATATGCCCTCTGCCGGTTCT 61.057 55.000 1.90 0.00 40.16 3.01
577 3141 0.179018 AATATGCCCTCTGCCGGTTC 60.179 55.000 1.90 0.00 40.16 3.62
578 3142 0.466189 CAATATGCCCTCTGCCGGTT 60.466 55.000 1.90 0.00 40.16 4.44
579 3143 1.149174 CAATATGCCCTCTGCCGGT 59.851 57.895 1.90 0.00 40.16 5.28
580 3144 1.601759 CCAATATGCCCTCTGCCGG 60.602 63.158 0.00 0.00 40.16 6.13
581 3145 0.886490 GACCAATATGCCCTCTGCCG 60.886 60.000 0.00 0.00 40.16 5.69
582 3146 0.475906 AGACCAATATGCCCTCTGCC 59.524 55.000 0.00 0.00 40.16 4.85
583 3147 2.355010 AAGACCAATATGCCCTCTGC 57.645 50.000 0.00 0.00 41.77 4.26
584 3148 4.696479 ACTAAGACCAATATGCCCTCTG 57.304 45.455 0.00 0.00 0.00 3.35
585 3149 5.468658 ACTACTAAGACCAATATGCCCTCT 58.531 41.667 0.00 0.00 0.00 3.69
586 3150 5.810080 ACTACTAAGACCAATATGCCCTC 57.190 43.478 0.00 0.00 0.00 4.30
587 3151 6.213600 CCATACTACTAAGACCAATATGCCCT 59.786 42.308 0.00 0.00 0.00 5.19
588 3152 6.013639 ACCATACTACTAAGACCAATATGCCC 60.014 42.308 0.00 0.00 0.00 5.36
589 3153 7.005709 ACCATACTACTAAGACCAATATGCC 57.994 40.000 0.00 0.00 0.00 4.40
593 3157 9.886337 TCCAATACCATACTACTAAGACCAATA 57.114 33.333 0.00 0.00 0.00 1.90
594 3158 8.792830 TCCAATACCATACTACTAAGACCAAT 57.207 34.615 0.00 0.00 0.00 3.16
595 3159 8.647796 CATCCAATACCATACTACTAAGACCAA 58.352 37.037 0.00 0.00 0.00 3.67
596 3160 7.256190 GCATCCAATACCATACTACTAAGACCA 60.256 40.741 0.00 0.00 0.00 4.02
597 3161 7.038941 AGCATCCAATACCATACTACTAAGACC 60.039 40.741 0.00 0.00 0.00 3.85
598 3162 7.815068 CAGCATCCAATACCATACTACTAAGAC 59.185 40.741 0.00 0.00 0.00 3.01
599 3163 7.525526 GCAGCATCCAATACCATACTACTAAGA 60.526 40.741 0.00 0.00 0.00 2.10
600 3164 6.591834 GCAGCATCCAATACCATACTACTAAG 59.408 42.308 0.00 0.00 0.00 2.18
601 3165 6.464222 GCAGCATCCAATACCATACTACTAA 58.536 40.000 0.00 0.00 0.00 2.24
602 3166 5.046591 GGCAGCATCCAATACCATACTACTA 60.047 44.000 0.00 0.00 0.00 1.82
603 3167 4.263068 GGCAGCATCCAATACCATACTACT 60.263 45.833 0.00 0.00 0.00 2.57
604 3168 4.003648 GGCAGCATCCAATACCATACTAC 58.996 47.826 0.00 0.00 0.00 2.73
605 3169 3.909995 AGGCAGCATCCAATACCATACTA 59.090 43.478 0.00 0.00 0.00 1.82
606 3170 2.713167 AGGCAGCATCCAATACCATACT 59.287 45.455 0.00 0.00 0.00 2.12
607 3171 2.816087 CAGGCAGCATCCAATACCATAC 59.184 50.000 0.00 0.00 0.00 2.39
608 3172 2.710471 TCAGGCAGCATCCAATACCATA 59.290 45.455 0.00 0.00 0.00 2.74
609 3173 1.496001 TCAGGCAGCATCCAATACCAT 59.504 47.619 0.00 0.00 0.00 3.55
610 3174 0.918258 TCAGGCAGCATCCAATACCA 59.082 50.000 0.00 0.00 0.00 3.25
611 3175 2.157738 GATCAGGCAGCATCCAATACC 58.842 52.381 0.00 0.00 0.00 2.73
612 3176 2.854963 TGATCAGGCAGCATCCAATAC 58.145 47.619 0.00 0.00 0.00 1.89
613 3177 3.073356 TGATGATCAGGCAGCATCCAATA 59.927 43.478 0.09 0.00 38.06 1.90
614 3178 2.158519 TGATGATCAGGCAGCATCCAAT 60.159 45.455 0.09 0.00 38.06 3.16
615 3179 1.213430 TGATGATCAGGCAGCATCCAA 59.787 47.619 0.09 0.00 38.06 3.53
616 3180 0.841289 TGATGATCAGGCAGCATCCA 59.159 50.000 0.09 0.00 38.06 3.41
617 3181 2.201921 ATGATGATCAGGCAGCATCC 57.798 50.000 0.09 0.00 40.56 3.51
619 3183 2.951229 TGATGATGATCAGGCAGCAT 57.049 45.000 13.35 6.41 46.50 3.79
620 3184 2.721425 TTGATGATGATCAGGCAGCA 57.279 45.000 13.35 13.35 39.81 4.41
621 3185 4.110482 GTTTTTGATGATGATCAGGCAGC 58.890 43.478 0.09 5.62 39.81 5.25
622 3186 5.319140 TGTTTTTGATGATGATCAGGCAG 57.681 39.130 0.09 0.00 39.81 4.85
623 3187 5.725325 TTGTTTTTGATGATGATCAGGCA 57.275 34.783 0.09 2.28 39.81 4.75
624 3188 6.161381 ACTTTGTTTTTGATGATGATCAGGC 58.839 36.000 0.09 0.00 39.81 4.85
625 3189 9.865321 ATTACTTTGTTTTTGATGATGATCAGG 57.135 29.630 0.09 0.00 39.81 3.86
627 3191 9.859427 GGATTACTTTGTTTTTGATGATGATCA 57.141 29.630 0.00 0.00 36.78 2.92
628 3192 9.859427 TGGATTACTTTGTTTTTGATGATGATC 57.141 29.630 0.00 0.00 0.00 2.92
633 3197 9.883142 AGTTTTGGATTACTTTGTTTTTGATGA 57.117 25.926 0.00 0.00 0.00 2.92
643 3207 9.877137 GGCAAAATAAAGTTTTGGATTACTTTG 57.123 29.630 13.26 0.00 42.71 2.77
644 3208 9.062524 GGGCAAAATAAAGTTTTGGATTACTTT 57.937 29.630 13.26 0.00 44.38 2.66
645 3209 7.663905 GGGGCAAAATAAAGTTTTGGATTACTT 59.336 33.333 13.26 0.00 39.19 2.24
646 3210 7.017155 AGGGGCAAAATAAAGTTTTGGATTACT 59.983 33.333 13.26 0.00 39.19 2.24
647 3211 7.165485 AGGGGCAAAATAAAGTTTTGGATTAC 58.835 34.615 13.26 0.00 39.19 1.89
648 3212 7.323052 AGGGGCAAAATAAAGTTTTGGATTA 57.677 32.000 13.26 0.00 39.19 1.75
649 3213 6.199557 AGGGGCAAAATAAAGTTTTGGATT 57.800 33.333 13.26 0.00 39.19 3.01
650 3214 5.841267 AGGGGCAAAATAAAGTTTTGGAT 57.159 34.783 13.26 0.00 39.19 3.41
651 3215 5.372373 CAAGGGGCAAAATAAAGTTTTGGA 58.628 37.500 13.26 0.00 39.19 3.53
652 3216 4.518590 CCAAGGGGCAAAATAAAGTTTTGG 59.481 41.667 13.26 0.00 39.19 3.28
653 3217 5.372373 TCCAAGGGGCAAAATAAAGTTTTG 58.628 37.500 8.47 8.47 41.09 2.44
654 3218 5.620206 CTCCAAGGGGCAAAATAAAGTTTT 58.380 37.500 0.00 0.00 0.00 2.43
655 3219 4.504864 GCTCCAAGGGGCAAAATAAAGTTT 60.505 41.667 5.98 0.00 0.00 2.66
656 3220 3.007940 GCTCCAAGGGGCAAAATAAAGTT 59.992 43.478 5.98 0.00 0.00 2.66
659 3223 2.614259 TGCTCCAAGGGGCAAAATAAA 58.386 42.857 12.06 0.00 35.40 1.40
666 3230 2.360191 GGAATGCTCCAAGGGGCA 59.640 61.111 17.22 17.22 41.96 5.36
697 3261 1.202879 TGAGATTTGGCCCTTTCACGT 60.203 47.619 0.00 0.00 0.00 4.49
698 3262 1.533625 TGAGATTTGGCCCTTTCACG 58.466 50.000 0.00 0.00 0.00 4.35
719 3284 2.885266 GACCCCCTTTTCTCTTGTTCAC 59.115 50.000 0.00 0.00 0.00 3.18
720 3285 2.512056 TGACCCCCTTTTCTCTTGTTCA 59.488 45.455 0.00 0.00 0.00 3.18
721 3286 3.223674 TGACCCCCTTTTCTCTTGTTC 57.776 47.619 0.00 0.00 0.00 3.18
722 3287 3.680777 TTGACCCCCTTTTCTCTTGTT 57.319 42.857 0.00 0.00 0.00 2.83
724 3289 4.411013 AGATTTGACCCCCTTTTCTCTTG 58.589 43.478 0.00 0.00 0.00 3.02
725 3290 4.749048 AGATTTGACCCCCTTTTCTCTT 57.251 40.909 0.00 0.00 0.00 2.85
726 3291 4.749048 AAGATTTGACCCCCTTTTCTCT 57.251 40.909 0.00 0.00 0.00 3.10
727 3292 4.588951 ACAAAGATTTGACCCCCTTTTCTC 59.411 41.667 12.07 0.00 40.55 2.87
729 3294 4.955811 ACAAAGATTTGACCCCCTTTTC 57.044 40.909 12.07 0.00 40.55 2.29
732 3309 4.556697 AGAAACAAAGATTTGACCCCCTT 58.443 39.130 12.07 0.00 40.55 3.95
735 3312 3.818773 TCGAGAAACAAAGATTTGACCCC 59.181 43.478 12.07 0.00 40.55 4.95
739 3316 6.288294 TCTTCCTCGAGAAACAAAGATTTGA 58.712 36.000 15.71 0.00 41.23 2.69
747 3324 1.002087 GCCCTCTTCCTCGAGAAACAA 59.998 52.381 15.71 0.00 32.88 2.83
749 3326 0.458716 CGCCCTCTTCCTCGAGAAAC 60.459 60.000 15.71 0.00 32.88 2.78
771 3348 3.188786 CACGCCTCTGCCTAACGC 61.189 66.667 0.00 0.00 38.31 4.84
843 3420 7.391148 TGGTACAGGAAGCAAAAAGATATTC 57.609 36.000 0.00 0.00 0.00 1.75
876 3453 3.191791 GCCCCTTCGCTTTTGTATTTGTA 59.808 43.478 0.00 0.00 0.00 2.41
877 3454 2.029380 GCCCCTTCGCTTTTGTATTTGT 60.029 45.455 0.00 0.00 0.00 2.83
878 3455 2.606108 GCCCCTTCGCTTTTGTATTTG 58.394 47.619 0.00 0.00 0.00 2.32
879 3456 1.201414 CGCCCCTTCGCTTTTGTATTT 59.799 47.619 0.00 0.00 0.00 1.40
880 3457 0.808755 CGCCCCTTCGCTTTTGTATT 59.191 50.000 0.00 0.00 0.00 1.89
881 3458 0.035820 TCGCCCCTTCGCTTTTGTAT 60.036 50.000 0.00 0.00 0.00 2.29
955 3537 3.717294 CAACGAGGTGGGGAGGGG 61.717 72.222 0.00 0.00 0.00 4.79
1074 3678 2.860972 GAAACAGGAGCGGAGGGAGC 62.861 65.000 0.00 0.00 0.00 4.70
1077 3681 1.219393 GAGAAACAGGAGCGGAGGG 59.781 63.158 0.00 0.00 0.00 4.30
1078 3682 1.153745 CGAGAAACAGGAGCGGAGG 60.154 63.158 0.00 0.00 0.00 4.30
1079 3683 1.807573 GCGAGAAACAGGAGCGGAG 60.808 63.158 0.00 0.00 0.00 4.63
1080 3684 2.261671 GCGAGAAACAGGAGCGGA 59.738 61.111 0.00 0.00 0.00 5.54
1082 3686 0.103208 ATAGGCGAGAAACAGGAGCG 59.897 55.000 0.00 0.00 0.00 5.03
1083 3687 1.134670 ACATAGGCGAGAAACAGGAGC 60.135 52.381 0.00 0.00 0.00 4.70
1084 3688 2.969628 ACATAGGCGAGAAACAGGAG 57.030 50.000 0.00 0.00 0.00 3.69
1085 3689 3.321111 GGATACATAGGCGAGAAACAGGA 59.679 47.826 0.00 0.00 0.00 3.86
1086 3690 3.069586 TGGATACATAGGCGAGAAACAGG 59.930 47.826 0.00 0.00 46.17 4.00
1087 3691 4.322080 TGGATACATAGGCGAGAAACAG 57.678 45.455 0.00 0.00 46.17 3.16
1114 3718 1.122227 TCATCGCATCAGATCACCCA 58.878 50.000 0.00 0.00 0.00 4.51
1130 3734 1.228245 CCCAATCCGGCCGAATCAT 60.228 57.895 30.73 10.02 0.00 2.45
1176 3780 2.035626 CCATGGAACCAAGCCCGT 59.964 61.111 5.56 0.00 0.00 5.28
1177 3781 1.750399 CTCCATGGAACCAAGCCCG 60.750 63.158 17.00 0.00 0.00 6.13
1180 3784 2.409870 CGCCTCCATGGAACCAAGC 61.410 63.158 17.00 12.30 38.35 4.01
1181 3785 0.107017 ATCGCCTCCATGGAACCAAG 60.107 55.000 17.00 3.21 38.35 3.61
1183 3787 0.331278 AAATCGCCTCCATGGAACCA 59.669 50.000 17.00 0.00 38.35 3.67
1185 3789 2.919228 AGTAAATCGCCTCCATGGAAC 58.081 47.619 17.00 10.09 38.35 3.62
1187 3791 4.974645 AATAGTAAATCGCCTCCATGGA 57.025 40.909 15.27 15.27 38.35 3.41
1217 3830 1.973138 CAGCAAATCACTTTCGCAGG 58.027 50.000 0.00 0.00 0.00 4.85
1218 3831 1.334054 GCAGCAAATCACTTTCGCAG 58.666 50.000 0.00 0.00 0.00 5.18
1226 3839 2.730090 CGTGGAAGATGCAGCAAATCAC 60.730 50.000 4.07 6.23 0.00 3.06
1227 3840 1.469703 CGTGGAAGATGCAGCAAATCA 59.530 47.619 4.07 0.00 0.00 2.57
1233 3846 1.639298 GGTGACGTGGAAGATGCAGC 61.639 60.000 0.00 0.00 0.00 5.25
1234 3847 0.036952 AGGTGACGTGGAAGATGCAG 60.037 55.000 0.00 0.00 0.00 4.41
1235 3848 0.320683 CAGGTGACGTGGAAGATGCA 60.321 55.000 0.00 0.00 0.00 3.96
1236 3849 1.639298 GCAGGTGACGTGGAAGATGC 61.639 60.000 7.43 0.00 0.00 3.91
1237 3850 1.354337 CGCAGGTGACGTGGAAGATG 61.354 60.000 7.43 0.00 0.00 2.90
1244 3857 0.726827 AATTATGCGCAGGTGACGTG 59.273 50.000 18.32 0.12 0.00 4.49
1250 3863 2.560542 TGGAAACAAATTATGCGCAGGT 59.439 40.909 18.32 1.49 37.44 4.00
1264 3877 9.927668 GAAAATAAATCCTCTCAATTGGAAACA 57.072 29.630 5.42 0.00 35.81 2.83
1265 3878 9.076596 CGAAAATAAATCCTCTCAATTGGAAAC 57.923 33.333 5.42 0.00 35.81 2.78
1266 3879 8.802267 ACGAAAATAAATCCTCTCAATTGGAAA 58.198 29.630 5.42 0.00 35.81 3.13
1267 3880 8.348285 ACGAAAATAAATCCTCTCAATTGGAA 57.652 30.769 5.42 0.00 35.81 3.53
1268 3881 7.201609 CGACGAAAATAAATCCTCTCAATTGGA 60.202 37.037 5.42 1.12 36.72 3.53
1269 3882 6.907212 CGACGAAAATAAATCCTCTCAATTGG 59.093 38.462 5.42 0.00 0.00 3.16
1270 3883 6.907212 CCGACGAAAATAAATCCTCTCAATTG 59.093 38.462 0.00 0.00 0.00 2.32
1271 3884 6.821665 TCCGACGAAAATAAATCCTCTCAATT 59.178 34.615 0.00 0.00 0.00 2.32
1272 3885 6.346096 TCCGACGAAAATAAATCCTCTCAAT 58.654 36.000 0.00 0.00 0.00 2.57
1273 3886 5.726397 TCCGACGAAAATAAATCCTCTCAA 58.274 37.500 0.00 0.00 0.00 3.02
1274 3887 5.333299 TCCGACGAAAATAAATCCTCTCA 57.667 39.130 0.00 0.00 0.00 3.27
1275 3888 5.117287 CGATCCGACGAAAATAAATCCTCTC 59.883 44.000 0.00 0.00 35.09 3.20
1276 3889 4.982916 CGATCCGACGAAAATAAATCCTCT 59.017 41.667 0.00 0.00 35.09 3.69
1277 3890 4.743644 ACGATCCGACGAAAATAAATCCTC 59.256 41.667 0.00 0.00 37.03 3.71
1278 3891 4.690122 ACGATCCGACGAAAATAAATCCT 58.310 39.130 0.00 0.00 37.03 3.24
1279 3892 5.399604 AACGATCCGACGAAAATAAATCC 57.600 39.130 0.00 0.00 37.03 3.01
1280 3893 6.290385 GCAAAACGATCCGACGAAAATAAATC 60.290 38.462 0.00 0.00 37.03 2.17
1284 3897 3.993547 GCAAAACGATCCGACGAAAATA 58.006 40.909 0.00 0.00 37.03 1.40
1311 3924 1.065358 AAAATCAGACACGCGTACCG 58.935 50.000 13.44 1.44 44.21 4.02
1312 3925 2.063266 TCAAAATCAGACACGCGTACC 58.937 47.619 13.44 6.70 0.00 3.34
1315 3928 0.506932 CGTCAAAATCAGACACGCGT 59.493 50.000 5.58 5.58 35.77 6.01
1316 3929 0.506932 ACGTCAAAATCAGACACGCG 59.493 50.000 3.53 3.53 35.77 6.01
1317 3930 1.460267 CGACGTCAAAATCAGACACGC 60.460 52.381 17.16 0.00 35.77 5.34
1318 3931 1.784856 ACGACGTCAAAATCAGACACG 59.215 47.619 17.16 0.00 39.48 4.49
1319 3932 2.538449 ACACGACGTCAAAATCAGACAC 59.462 45.455 17.16 0.00 35.77 3.67
1320 3933 2.816689 ACACGACGTCAAAATCAGACA 58.183 42.857 17.16 0.00 35.77 3.41
1367 3995 5.478407 TCAAAATCAAGACTATCTGACGCA 58.522 37.500 0.00 0.00 0.00 5.24
1422 4055 1.081376 CGATCGTCGCAGGGGTATC 60.081 63.158 7.03 0.00 31.14 2.24
1465 4098 1.523758 ACTAAGCGTGGGAGCAAAAG 58.476 50.000 0.00 0.00 40.15 2.27
1466 4099 1.975660 AACTAAGCGTGGGAGCAAAA 58.024 45.000 0.00 0.00 40.15 2.44
1467 4100 1.975660 AAACTAAGCGTGGGAGCAAA 58.024 45.000 0.00 0.00 40.15 3.68
1497 4130 4.574674 ATTATCAACCTCAACTCTGCCA 57.425 40.909 0.00 0.00 0.00 4.92
1507 4140 9.575783 GGTCGATATCTAGAAATTATCAACCTC 57.424 37.037 12.08 0.76 0.00 3.85
1516 4149 7.041098 GCATGTTTGGGTCGATATCTAGAAATT 60.041 37.037 0.00 0.00 0.00 1.82
1542 4175 2.659757 CTCGCATTCACTTTGCAACATG 59.340 45.455 0.00 0.00 40.14 3.21
1546 4179 2.098934 ACAACTCGCATTCACTTTGCAA 59.901 40.909 0.00 0.00 40.14 4.08
1586 4223 4.261801 ACATGACGAATTCCGATTTCCTT 58.738 39.130 0.00 0.00 41.76 3.36
1587 4224 3.871594 GACATGACGAATTCCGATTTCCT 59.128 43.478 0.00 0.00 41.76 3.36
1588 4225 3.871594 AGACATGACGAATTCCGATTTCC 59.128 43.478 0.00 0.00 41.76 3.13
1589 4226 4.566759 TCAGACATGACGAATTCCGATTTC 59.433 41.667 0.00 0.00 41.76 2.17
1590 4227 4.503910 TCAGACATGACGAATTCCGATTT 58.496 39.130 0.00 0.00 41.76 2.17
1591 4228 4.123497 TCAGACATGACGAATTCCGATT 57.877 40.909 0.00 0.00 41.76 3.34
1592 4229 3.801114 TCAGACATGACGAATTCCGAT 57.199 42.857 0.00 0.00 41.76 4.18
1593 4230 3.586100 TTCAGACATGACGAATTCCGA 57.414 42.857 0.00 0.00 41.76 4.55
1662 4366 1.600023 TCCGCGTGAAAATTTGACCT 58.400 45.000 4.92 0.00 0.00 3.85
1664 4368 3.368495 AGTTTCCGCGTGAAAATTTGAC 58.632 40.909 19.61 10.37 44.30 3.18
1669 4373 4.514066 AGAAGTTAGTTTCCGCGTGAAAAT 59.486 37.500 20.66 20.66 44.30 1.82
1732 4445 8.972458 AAACCATGGCAAAATTAAACTAAACT 57.028 26.923 13.04 0.00 0.00 2.66
1742 4455 7.986889 GGATCATAAGTAAACCATGGCAAAATT 59.013 33.333 13.04 5.20 0.00 1.82
1862 4617 3.636679 CTCTCCTAGACACATCCTCCAA 58.363 50.000 0.00 0.00 0.00 3.53
1896 4654 1.895798 TCTAGTCTGCTCAACCAGGTG 59.104 52.381 0.00 0.00 33.64 4.00
1966 4725 7.328737 AGTTAACAGATCGCCGAATATTCATAC 59.671 37.037 15.57 3.20 0.00 2.39
1974 4733 4.499357 GGAGTAGTTAACAGATCGCCGAAT 60.499 45.833 8.61 0.00 0.00 3.34
1978 4737 4.579753 ACTAGGAGTAGTTAACAGATCGCC 59.420 45.833 8.61 6.25 35.88 5.54
2055 4814 0.462759 GGGACAGCAAATCTCCTCCG 60.463 60.000 0.00 0.00 0.00 4.63
2073 4832 0.108662 TGCACAGATGACGTAGCAGG 60.109 55.000 0.00 0.00 0.00 4.85
2076 4835 1.996292 TTCTGCACAGATGACGTAGC 58.004 50.000 0.31 0.00 37.29 3.58
2124 4883 2.158841 CCACCCGTAAAACAATCTGACG 59.841 50.000 0.00 0.00 0.00 4.35
2132 4891 1.767681 ACACCTACCACCCGTAAAACA 59.232 47.619 0.00 0.00 0.00 2.83
2166 4935 8.598041 GGACTAAATCTCTACAACCCATATGAT 58.402 37.037 3.65 0.00 0.00 2.45
2188 4957 8.571336 CAAAGATTATCTGACACAAAAAGGACT 58.429 33.333 0.00 0.00 0.00 3.85
2252 5023 7.285401 TCCTTCAATGTGGCTTAATAATTCTCC 59.715 37.037 0.00 0.00 0.00 3.71
2309 5080 8.652810 AATCAATTATGGAAGCAAGCAATAAC 57.347 30.769 0.00 0.00 0.00 1.89
2338 5109 2.093447 CCTGAACTCTGCCGAATAAGGT 60.093 50.000 0.00 0.00 0.00 3.50
2376 5147 4.026804 CAGCATACAGGTTTCGTTCGATAC 60.027 45.833 7.13 7.13 0.00 2.24
2420 5191 9.349713 GTTCTCCCCAAATGTGTAAATCATATA 57.650 33.333 0.00 0.00 0.00 0.86
2444 5215 1.771854 TGTACACACATCCCCACAGTT 59.228 47.619 0.00 0.00 0.00 3.16
2445 5216 1.429930 TGTACACACATCCCCACAGT 58.570 50.000 0.00 0.00 0.00 3.55
2509 5280 5.063564 CGGGCTACAAGATTAAGTTTCAGAC 59.936 44.000 0.00 0.00 0.00 3.51
2532 5303 5.007724 GCTTAACAAGGTCATAGAATTCCCG 59.992 44.000 0.65 0.00 0.00 5.14
2631 5410 9.249053 TGATGGCAAAATCCAACTAAAATAGTA 57.751 29.630 0.00 0.00 39.96 1.82
2685 5464 6.156256 ACCATAAGTCCACTTCATGCTTACTA 59.844 38.462 0.00 0.00 37.40 1.82
2759 5538 0.948678 TGTTTAAGGGAACTGCACGC 59.051 50.000 0.00 0.00 42.68 5.34
2815 5594 5.007332 ACAAAACTACAGAAACATGACCGTC 59.993 40.000 0.00 0.00 0.00 4.79
2838 5617 9.968743 CGTCTAAAAATAGAGTAACCAATGAAC 57.031 33.333 0.00 0.00 0.00 3.18
3046 5834 8.545229 ACTCTGTAGAAACAAATGAATGAGAG 57.455 34.615 0.00 0.00 34.49 3.20
3103 5891 7.830739 AGAAGAACCTACCAAATTTAAGCATG 58.169 34.615 0.00 0.00 0.00 4.06
3124 5912 3.786635 AGCGCACTAGAACCATTAGAAG 58.213 45.455 11.47 0.00 0.00 2.85
3238 6026 5.883673 AGCAAACTAACAGTAACCAACTTCA 59.116 36.000 0.00 0.00 35.76 3.02
3301 6097 0.321671 TGGCTTTGGAAGTCTCGGAG 59.678 55.000 0.00 0.00 33.26 4.63
3421 6217 9.512588 TCTTATATTAGTTTACGGAGGGAGTAG 57.487 37.037 0.00 0.00 0.00 2.57
3425 6221 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
3426 6222 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
3428 6224 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
3430 6226 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
3444 6240 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
3445 6241 8.738106 ACACTACTTTAGTAATCTAAACGCTCT 58.262 33.333 0.00 0.00 40.05 4.09
3446 6242 8.908172 ACACTACTTTAGTAATCTAAACGCTC 57.092 34.615 0.00 0.00 40.05 5.03
3447 6243 9.351570 GAACACTACTTTAGTAATCTAAACGCT 57.648 33.333 0.00 0.00 40.05 5.07
3448 6244 9.351570 AGAACACTACTTTAGTAATCTAAACGC 57.648 33.333 0.00 0.00 40.05 4.84
3454 6250 9.351570 GCGTTTAGAACACTACTTTAGTAATCT 57.648 33.333 5.76 5.76 37.23 2.40
3455 6251 9.351570 AGCGTTTAGAACACTACTTTAGTAATC 57.648 33.333 0.00 0.00 37.23 1.75
3456 6252 9.351570 GAGCGTTTAGAACACTACTTTAGTAAT 57.648 33.333 0.00 0.00 37.23 1.89
3457 6253 8.571336 AGAGCGTTTAGAACACTACTTTAGTAA 58.429 33.333 0.00 0.00 37.23 2.24
3458 6254 8.103948 AGAGCGTTTAGAACACTACTTTAGTA 57.896 34.615 0.00 0.00 37.23 1.82
3459 6255 6.979465 AGAGCGTTTAGAACACTACTTTAGT 58.021 36.000 0.00 0.00 40.28 2.24
3460 6256 7.870588 AAGAGCGTTTAGAACACTACTTTAG 57.129 36.000 0.00 0.00 0.00 1.85
3475 6271 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
3476 6272 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
3477 6273 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
3478 6274 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
3479 6275 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
3492 6288 9.979897 TGTAATAAGTAGTACTCCCTCTGTAAA 57.020 33.333 2.58 0.00 0.00 2.01
3493 6289 9.401058 GTGTAATAAGTAGTACTCCCTCTGTAA 57.599 37.037 2.58 0.00 0.00 2.41
3494 6290 8.776119 AGTGTAATAAGTAGTACTCCCTCTGTA 58.224 37.037 2.58 0.00 0.00 2.74
3495 6291 7.556996 CAGTGTAATAAGTAGTACTCCCTCTGT 59.443 40.741 2.58 0.00 0.00 3.41
3496 6292 7.556996 ACAGTGTAATAAGTAGTACTCCCTCTG 59.443 40.741 2.58 8.65 0.00 3.35
3497 6293 7.641249 ACAGTGTAATAAGTAGTACTCCCTCT 58.359 38.462 2.58 0.00 0.00 3.69
3498 6294 7.878547 ACAGTGTAATAAGTAGTACTCCCTC 57.121 40.000 2.58 0.00 0.00 4.30
3499 6295 9.933240 ATAACAGTGTAATAAGTAGTACTCCCT 57.067 33.333 2.58 0.00 0.00 4.20
3571 6368 5.291128 CGAAGGAAATAGCGTTCACTACAAT 59.709 40.000 0.00 0.00 33.52 2.71
3676 6473 5.048782 TGTCAGGCAACAATTCACAACTATC 60.049 40.000 0.00 0.00 41.41 2.08
3680 6477 3.435105 TGTCAGGCAACAATTCACAAC 57.565 42.857 0.00 0.00 41.41 3.32
3830 6627 7.197071 AGCATAAACGTTGACAACTTGAATA 57.803 32.000 16.02 2.98 0.00 1.75
3997 6794 9.277783 CTTCCATTTTAAGGATCGTTCTATCAT 57.722 33.333 3.47 0.00 34.56 2.45
4245 7042 4.039730 AGCAGACTTAGATATCACGGCAAT 59.960 41.667 5.32 0.00 0.00 3.56
4328 7125 1.645710 GTTTCTCTGGAGGAGGTGGA 58.354 55.000 0.00 0.00 42.10 4.02
4355 7152 5.136828 TCTACTTTTGGTGATTTTGCCTCA 58.863 37.500 0.00 0.00 0.00 3.86
4513 7310 6.201226 TGCACTTATCGCAATCCAAAAATA 57.799 33.333 0.00 0.00 36.17 1.40
4526 7323 2.223112 GCATTGACACCTGCACTTATCG 60.223 50.000 4.66 0.00 38.28 2.92
4772 7569 9.753674 AGAGGGACATTGTTTTTAGAATAATGA 57.246 29.630 10.83 0.00 33.98 2.57
4781 7578 7.893302 ACATAATGGAGAGGGACATTGTTTTTA 59.107 33.333 0.00 0.00 37.80 1.52
4811 7608 2.909006 ACAGACTCATCATGTCAACCCT 59.091 45.455 0.00 0.00 36.94 4.34
4881 7678 7.031372 AGCATAACATGTTTGAAGCATACTTG 58.969 34.615 17.78 0.00 35.82 3.16
5069 7958 5.902613 TTGGTCCTAATGCAATGAAGAAG 57.097 39.130 0.00 0.00 0.00 2.85
5101 7990 1.961394 TCTTTGTAGTCAGTCCGCAGT 59.039 47.619 0.00 0.00 0.00 4.40
5155 8044 3.441572 CCTTAACAAAGCAGGACATCAGG 59.558 47.826 0.00 0.00 0.00 3.86
5401 8293 3.643159 AAAGAAAATGCTGGTCGTTCC 57.357 42.857 0.00 0.00 0.00 3.62
5404 8296 4.339814 TGGTAAAAAGAAAATGCTGGTCGT 59.660 37.500 0.00 0.00 0.00 4.34
5461 8353 2.814336 CCACAAGACCCTAAAGCAGAAC 59.186 50.000 0.00 0.00 0.00 3.01
5464 8356 2.154462 CACCACAAGACCCTAAAGCAG 58.846 52.381 0.00 0.00 0.00 4.24
5508 8400 5.618056 TCTCAATGTCAGCAAAGTTCATC 57.382 39.130 0.00 0.00 0.00 2.92
5619 8511 5.163405 GCTGATAAGACTTCCATAGACACCA 60.163 44.000 0.00 0.00 0.00 4.17
5954 8847 6.003859 TCTTTACCCCAGAAGTAACAAACA 57.996 37.500 0.00 0.00 29.63 2.83
5955 8848 7.368059 CAATCTTTACCCCAGAAGTAACAAAC 58.632 38.462 0.00 0.00 29.63 2.93
5985 8879 7.279090 TGTGTACAATTATTCCGAAATCGATGT 59.721 33.333 0.00 0.00 43.02 3.06
6081 8975 8.335532 AGGAAATGAATTCGTTGATGTTTCTA 57.664 30.769 13.58 0.00 39.05 2.10
6100 8995 9.588096 ACAAGTATAACCTCAGAAAAAGGAAAT 57.412 29.630 0.00 0.00 37.35 2.17
6106 9001 7.229907 GTCCCAACAAGTATAACCTCAGAAAAA 59.770 37.037 0.00 0.00 0.00 1.94
6118 9013 6.095440 GGAACTAGTACGTCCCAACAAGTATA 59.905 42.308 0.00 0.00 0.00 1.47
6160 9055 4.130118 GAGGGTGTCCATTGCTATTGTAG 58.870 47.826 0.00 0.00 34.83 2.74
6172 9067 1.474320 CGACAAAGTTGAGGGTGTCCA 60.474 52.381 0.00 0.00 37.66 4.02
6173 9068 1.226746 CGACAAAGTTGAGGGTGTCC 58.773 55.000 0.00 0.00 37.66 4.02
6175 9070 1.663695 CACGACAAAGTTGAGGGTGT 58.336 50.000 0.00 0.00 0.00 4.16
6176 9071 0.307760 GCACGACAAAGTTGAGGGTG 59.692 55.000 0.00 4.25 33.13 4.61
6177 9072 0.818040 GGCACGACAAAGTTGAGGGT 60.818 55.000 0.00 0.00 0.00 4.34
6178 9073 0.817634 TGGCACGACAAAGTTGAGGG 60.818 55.000 0.00 0.00 0.00 4.30
6191 9090 2.884663 TTAGCACGTTAAATGGCACG 57.115 45.000 0.00 0.00 42.29 5.34
6207 9106 6.507900 ACCAGACGTCACATGAGATAATTAG 58.492 40.000 19.50 0.00 0.00 1.73
6215 9117 2.438868 TCAACCAGACGTCACATGAG 57.561 50.000 19.50 2.99 0.00 2.90
6216 9118 3.066380 CAATCAACCAGACGTCACATGA 58.934 45.455 19.50 15.76 0.00 3.07
6234 9136 1.142465 CTGCCTCTGCCTGATACCAAT 59.858 52.381 0.00 0.00 36.33 3.16
6236 9138 1.340399 CCTGCCTCTGCCTGATACCA 61.340 60.000 0.00 0.00 36.33 3.25
6237 9139 1.341156 ACCTGCCTCTGCCTGATACC 61.341 60.000 0.00 0.00 36.33 2.73
6238 9140 0.179062 CACCTGCCTCTGCCTGATAC 60.179 60.000 0.00 0.00 36.33 2.24
6239 9141 0.618680 ACACCTGCCTCTGCCTGATA 60.619 55.000 0.00 0.00 36.33 2.15
6240 9142 1.495579 AACACCTGCCTCTGCCTGAT 61.496 55.000 0.00 0.00 36.33 2.90
6241 9143 1.708993 AAACACCTGCCTCTGCCTGA 61.709 55.000 0.00 0.00 36.33 3.86
6242 9144 1.228367 AAACACCTGCCTCTGCCTG 60.228 57.895 0.00 0.00 36.33 4.85
6243 9145 1.228367 CAAACACCTGCCTCTGCCT 60.228 57.895 0.00 0.00 36.33 4.75
6244 9146 0.610232 ATCAAACACCTGCCTCTGCC 60.610 55.000 0.00 0.00 36.33 4.85
6245 9147 0.807496 GATCAAACACCTGCCTCTGC 59.193 55.000 0.00 0.00 38.26 4.26
6246 9148 1.081892 CGATCAAACACCTGCCTCTG 58.918 55.000 0.00 0.00 0.00 3.35
6247 9149 0.687354 ACGATCAAACACCTGCCTCT 59.313 50.000 0.00 0.00 0.00 3.69
6248 9150 0.798776 CACGATCAAACACCTGCCTC 59.201 55.000 0.00 0.00 0.00 4.70
6258 9160 3.130633 CACTGGAACTGTCACGATCAAA 58.869 45.455 0.00 0.00 38.84 2.69
6265 9167 4.819630 TGGAAAATACACTGGAACTGTCAC 59.180 41.667 0.00 0.00 38.84 3.67
6302 9204 1.610363 TGCACCACGCTGGAAATTTA 58.390 45.000 10.46 0.00 40.96 1.40
6310 9212 1.731613 CAGCAATTGCACCACGCTG 60.732 57.895 30.89 15.28 45.16 5.18
6313 9215 0.661187 GACACAGCAATTGCACCACG 60.661 55.000 30.89 16.50 45.16 4.94
6314 9216 0.670162 AGACACAGCAATTGCACCAC 59.330 50.000 30.89 17.30 45.16 4.16
6327 9229 2.028112 GTCTACTGGGCATTCAGACACA 60.028 50.000 7.75 0.00 38.11 3.72
6334 9236 3.471680 GATGGAAGTCTACTGGGCATTC 58.528 50.000 0.00 0.00 0.00 2.67
6339 9241 4.408182 AATTCGATGGAAGTCTACTGGG 57.592 45.455 0.00 0.00 35.19 4.45
6348 9250 7.970061 TCAAAAGCTCAAATAATTCGATGGAAG 59.030 33.333 0.00 0.00 35.19 3.46
6354 9256 9.180678 GAAACTTCAAAAGCTCAAATAATTCGA 57.819 29.630 0.00 0.00 0.00 3.71
6390 9292 4.627058 TGTGTCACTAGAATGCGAAAAGA 58.373 39.130 4.27 0.00 0.00 2.52
6414 9322 3.555966 CACTCAAACTTCAAGGGGAACT 58.444 45.455 0.00 0.00 0.00 3.01
6421 9329 2.945008 TGCACTCCACTCAAACTTCAAG 59.055 45.455 0.00 0.00 0.00 3.02
6436 9344 5.238583 AGTTTAAGGACATACAGTGCACTC 58.761 41.667 18.64 4.49 41.69 3.51
6448 9356 3.720002 ACCCCTGAAAGAGTTTAAGGACA 59.280 43.478 4.54 0.00 34.07 4.02
6460 9368 2.305927 ACCTATGTGACACCCCTGAAAG 59.694 50.000 2.45 0.00 0.00 2.62
6508 9416 5.243283 ACACACTTACTGTAATTCGAGGACT 59.757 40.000 0.00 0.00 0.00 3.85
6518 9426 4.591498 ACCTGGATGACACACTTACTGTAA 59.409 41.667 0.00 0.00 0.00 2.41
6639 9551 0.907704 ACGCACCAGGGGTATCTTCA 60.908 55.000 0.00 0.00 41.47 3.02
6697 9609 6.549364 AGTCGCCAATATTTTTCCCATATTCA 59.451 34.615 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.