Multiple sequence alignment - TraesCS4A01G241800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G241800 chr4A 100.000 2573 0 0 1 2573 552147396 552144824 0.000000e+00 4752
1 TraesCS4A01G241800 chr4A 98.603 1432 20 0 553 1984 67592689 67594120 0.000000e+00 2534
2 TraesCS4A01G241800 chr4A 98.418 569 8 1 2006 2573 105660810 105660242 0.000000e+00 1000
3 TraesCS4A01G241800 chr7D 98.883 1432 16 0 553 1984 203495910 203497341 0.000000e+00 2556
4 TraesCS4A01G241800 chr7D 98.743 1432 18 0 553 1984 381915889 381917320 0.000000e+00 2545
5 TraesCS4A01G241800 chr7D 98.534 1432 21 0 553 1984 381977851 381976420 0.000000e+00 2529
6 TraesCS4A01G241800 chr7D 98.418 569 8 1 2006 2573 626646707 626646139 0.000000e+00 1000
7 TraesCS4A01G241800 chr6D 98.813 1432 17 0 553 1984 124513435 124514866 0.000000e+00 2551
8 TraesCS4A01G241800 chr7B 98.329 1436 20 1 553 1984 716842639 716841204 0.000000e+00 2516
9 TraesCS4A01G241800 chr7B 98.259 1436 21 1 553 1984 716882880 716881445 0.000000e+00 2510
10 TraesCS4A01G241800 chrUn 98.259 1436 21 1 553 1984 332213093 332211658 0.000000e+00 2510
11 TraesCS4A01G241800 chrUn 98.418 569 8 1 2006 2573 45097262 45096694 0.000000e+00 1000
12 TraesCS4A01G241800 chrUn 98.243 569 9 1 2006 2573 416115822 416116390 0.000000e+00 994
13 TraesCS4A01G241800 chr5A 98.259 1436 21 1 553 1984 19252948 19251513 0.000000e+00 2510
14 TraesCS4A01G241800 chr5A 98.946 569 5 1 2006 2573 238857923 238857355 0.000000e+00 1016
15 TraesCS4A01G241800 chr5A 98.768 568 7 0 2006 2573 238831561 238832128 0.000000e+00 1011
16 TraesCS4A01G241800 chr6A 98.770 569 6 1 2006 2573 155843109 155842541 0.000000e+00 1011
17 TraesCS4A01G241800 chr1D 98.770 569 6 1 2006 2573 493800922 493800354 0.000000e+00 1011
18 TraesCS4A01G241800 chr2D 98.418 569 8 1 2006 2573 635071330 635071898 0.000000e+00 1000
19 TraesCS4A01G241800 chr4B 86.572 283 25 6 29 301 68406076 68406355 1.500000e-77 300
20 TraesCS4A01G241800 chr4B 84.543 317 27 12 235 542 68414993 68415296 6.960000e-76 294
21 TraesCS4A01G241800 chr4B 83.710 221 11 6 347 542 68406509 68406729 4.370000e-43 185
22 TraesCS4A01G241800 chr4B 94.017 117 7 0 307 423 68424107 68424223 7.320000e-41 178
23 TraesCS4A01G241800 chr4D 80.556 324 30 15 76 369 46658734 46659054 4.310000e-53 219


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G241800 chr4A 552144824 552147396 2572 True 4752.0 4752 100.000 1 2573 1 chr4A.!!$R2 2572
1 TraesCS4A01G241800 chr4A 67592689 67594120 1431 False 2534.0 2534 98.603 553 1984 1 chr4A.!!$F1 1431
2 TraesCS4A01G241800 chr4A 105660242 105660810 568 True 1000.0 1000 98.418 2006 2573 1 chr4A.!!$R1 567
3 TraesCS4A01G241800 chr7D 203495910 203497341 1431 False 2556.0 2556 98.883 553 1984 1 chr7D.!!$F1 1431
4 TraesCS4A01G241800 chr7D 381915889 381917320 1431 False 2545.0 2545 98.743 553 1984 1 chr7D.!!$F2 1431
5 TraesCS4A01G241800 chr7D 381976420 381977851 1431 True 2529.0 2529 98.534 553 1984 1 chr7D.!!$R1 1431
6 TraesCS4A01G241800 chr7D 626646139 626646707 568 True 1000.0 1000 98.418 2006 2573 1 chr7D.!!$R2 567
7 TraesCS4A01G241800 chr6D 124513435 124514866 1431 False 2551.0 2551 98.813 553 1984 1 chr6D.!!$F1 1431
8 TraesCS4A01G241800 chr7B 716841204 716842639 1435 True 2516.0 2516 98.329 553 1984 1 chr7B.!!$R1 1431
9 TraesCS4A01G241800 chr7B 716881445 716882880 1435 True 2510.0 2510 98.259 553 1984 1 chr7B.!!$R2 1431
10 TraesCS4A01G241800 chrUn 332211658 332213093 1435 True 2510.0 2510 98.259 553 1984 1 chrUn.!!$R2 1431
11 TraesCS4A01G241800 chrUn 45096694 45097262 568 True 1000.0 1000 98.418 2006 2573 1 chrUn.!!$R1 567
12 TraesCS4A01G241800 chrUn 416115822 416116390 568 False 994.0 994 98.243 2006 2573 1 chrUn.!!$F1 567
13 TraesCS4A01G241800 chr5A 19251513 19252948 1435 True 2510.0 2510 98.259 553 1984 1 chr5A.!!$R1 1431
14 TraesCS4A01G241800 chr5A 238857355 238857923 568 True 1016.0 1016 98.946 2006 2573 1 chr5A.!!$R2 567
15 TraesCS4A01G241800 chr5A 238831561 238832128 567 False 1011.0 1011 98.768 2006 2573 1 chr5A.!!$F1 567
16 TraesCS4A01G241800 chr6A 155842541 155843109 568 True 1011.0 1011 98.770 2006 2573 1 chr6A.!!$R1 567
17 TraesCS4A01G241800 chr1D 493800354 493800922 568 True 1011.0 1011 98.770 2006 2573 1 chr1D.!!$R1 567
18 TraesCS4A01G241800 chr2D 635071330 635071898 568 False 1000.0 1000 98.418 2006 2573 1 chr2D.!!$F1 567
19 TraesCS4A01G241800 chr4B 68406076 68406729 653 False 242.5 300 85.141 29 542 2 chr4B.!!$F3 513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
476 477 0.03254 GTGTTTGCCAGGGCTCTTTG 59.967 55.0 12.19 0.0 42.51 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2259 2572 0.376152 CTACCTATGTCGCGTGTCGT 59.624 55.0 5.77 2.35 39.67 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.373565 CTGGCCCCTTCCGTTTGC 61.374 66.667 0.00 0.00 0.00 3.68
83 84 8.791327 ATTTATTACCTTTTCATTTTGCCTGG 57.209 30.769 0.00 0.00 0.00 4.45
84 85 4.615588 TTACCTTTTCATTTTGCCTGGG 57.384 40.909 0.00 0.00 0.00 4.45
85 86 2.688477 ACCTTTTCATTTTGCCTGGGA 58.312 42.857 0.00 0.00 0.00 4.37
86 87 3.250617 ACCTTTTCATTTTGCCTGGGAT 58.749 40.909 0.00 0.00 0.00 3.85
87 88 3.008266 ACCTTTTCATTTTGCCTGGGATG 59.992 43.478 0.00 0.00 0.00 3.51
88 89 3.602483 CTTTTCATTTTGCCTGGGATGG 58.398 45.455 0.00 0.00 0.00 3.51
89 90 1.570803 TTCATTTTGCCTGGGATGGG 58.429 50.000 0.00 0.00 0.00 4.00
90 91 0.709397 TCATTTTGCCTGGGATGGGA 59.291 50.000 0.00 0.00 0.00 4.37
91 92 1.291637 TCATTTTGCCTGGGATGGGAT 59.708 47.619 0.00 0.00 0.00 3.85
92 93 2.121129 CATTTTGCCTGGGATGGGATT 58.879 47.619 0.00 0.00 0.00 3.01
93 94 1.864669 TTTTGCCTGGGATGGGATTC 58.135 50.000 0.00 0.00 0.00 2.52
94 95 0.709397 TTTGCCTGGGATGGGATTCA 59.291 50.000 0.00 0.00 0.00 2.57
95 96 0.709397 TTGCCTGGGATGGGATTCAA 59.291 50.000 0.00 0.00 0.00 2.69
96 97 0.033208 TGCCTGGGATGGGATTCAAC 60.033 55.000 0.00 0.00 0.00 3.18
97 98 0.756815 GCCTGGGATGGGATTCAACC 60.757 60.000 0.00 0.00 37.56 3.77
98 99 0.929244 CCTGGGATGGGATTCAACCT 59.071 55.000 0.00 0.00 38.27 3.50
99 100 1.288932 CCTGGGATGGGATTCAACCTT 59.711 52.381 0.00 0.00 38.27 3.50
100 101 2.292455 CCTGGGATGGGATTCAACCTTT 60.292 50.000 0.00 0.00 38.27 3.11
101 102 2.762327 CTGGGATGGGATTCAACCTTTG 59.238 50.000 0.00 0.00 38.27 2.77
102 103 1.482182 GGGATGGGATTCAACCTTTGC 59.518 52.381 0.00 0.00 38.27 3.68
103 104 2.178580 GGATGGGATTCAACCTTTGCA 58.821 47.619 0.00 0.00 35.65 4.08
104 105 2.767960 GGATGGGATTCAACCTTTGCAT 59.232 45.455 0.00 0.00 35.65 3.96
105 106 3.198417 GGATGGGATTCAACCTTTGCATT 59.802 43.478 0.00 0.00 35.65 3.56
106 107 4.323715 GGATGGGATTCAACCTTTGCATTT 60.324 41.667 0.00 0.00 35.65 2.32
107 108 4.703379 TGGGATTCAACCTTTGCATTTT 57.297 36.364 0.00 0.00 0.00 1.82
108 109 4.640364 TGGGATTCAACCTTTGCATTTTC 58.360 39.130 0.00 0.00 0.00 2.29
109 110 4.002982 GGGATTCAACCTTTGCATTTTCC 58.997 43.478 0.00 0.00 0.00 3.13
110 111 4.263025 GGGATTCAACCTTTGCATTTTCCT 60.263 41.667 0.00 0.00 0.00 3.36
111 112 5.308014 GGATTCAACCTTTGCATTTTCCTT 58.692 37.500 0.00 0.00 0.00 3.36
112 113 5.179929 GGATTCAACCTTTGCATTTTCCTTG 59.820 40.000 0.00 0.00 0.00 3.61
113 114 4.070630 TCAACCTTTGCATTTTCCTTGG 57.929 40.909 0.00 0.00 0.00 3.61
114 115 3.454082 TCAACCTTTGCATTTTCCTTGGT 59.546 39.130 0.00 0.00 0.00 3.67
115 116 3.751479 ACCTTTGCATTTTCCTTGGTC 57.249 42.857 0.00 0.00 0.00 4.02
116 117 2.035832 ACCTTTGCATTTTCCTTGGTCG 59.964 45.455 0.00 0.00 0.00 4.79
117 118 2.035832 CCTTTGCATTTTCCTTGGTCGT 59.964 45.455 0.00 0.00 0.00 4.34
118 119 3.254657 CCTTTGCATTTTCCTTGGTCGTA 59.745 43.478 0.00 0.00 0.00 3.43
119 120 4.082245 CCTTTGCATTTTCCTTGGTCGTAT 60.082 41.667 0.00 0.00 0.00 3.06
120 121 4.695217 TTGCATTTTCCTTGGTCGTATC 57.305 40.909 0.00 0.00 0.00 2.24
121 122 3.950397 TGCATTTTCCTTGGTCGTATCT 58.050 40.909 0.00 0.00 0.00 1.98
122 123 4.331968 TGCATTTTCCTTGGTCGTATCTT 58.668 39.130 0.00 0.00 0.00 2.40
123 124 4.394920 TGCATTTTCCTTGGTCGTATCTTC 59.605 41.667 0.00 0.00 0.00 2.87
124 125 4.394920 GCATTTTCCTTGGTCGTATCTTCA 59.605 41.667 0.00 0.00 0.00 3.02
125 126 5.447818 GCATTTTCCTTGGTCGTATCTTCAG 60.448 44.000 0.00 0.00 0.00 3.02
126 127 4.884668 TTTCCTTGGTCGTATCTTCAGT 57.115 40.909 0.00 0.00 0.00 3.41
127 128 4.884668 TTCCTTGGTCGTATCTTCAGTT 57.115 40.909 0.00 0.00 0.00 3.16
128 129 4.884668 TCCTTGGTCGTATCTTCAGTTT 57.115 40.909 0.00 0.00 0.00 2.66
129 130 5.988310 TCCTTGGTCGTATCTTCAGTTTA 57.012 39.130 0.00 0.00 0.00 2.01
130 131 6.349243 TCCTTGGTCGTATCTTCAGTTTAA 57.651 37.500 0.00 0.00 0.00 1.52
131 132 6.761312 TCCTTGGTCGTATCTTCAGTTTAAA 58.239 36.000 0.00 0.00 0.00 1.52
132 133 7.391620 TCCTTGGTCGTATCTTCAGTTTAAAT 58.608 34.615 0.00 0.00 0.00 1.40
133 134 7.881232 TCCTTGGTCGTATCTTCAGTTTAAATT 59.119 33.333 0.00 0.00 0.00 1.82
134 135 8.512138 CCTTGGTCGTATCTTCAGTTTAAATTT 58.488 33.333 0.00 0.00 0.00 1.82
135 136 9.893305 CTTGGTCGTATCTTCAGTTTAAATTTT 57.107 29.630 0.00 0.00 0.00 1.82
136 137 9.887406 TTGGTCGTATCTTCAGTTTAAATTTTC 57.113 29.630 0.00 0.00 0.00 2.29
137 138 9.280174 TGGTCGTATCTTCAGTTTAAATTTTCT 57.720 29.630 0.00 0.00 0.00 2.52
155 156 9.606631 AAATTTTCTTTGCATAGTTTACACCAA 57.393 25.926 4.00 0.00 0.00 3.67
156 157 7.995463 TTTTCTTTGCATAGTTTACACCAAC 57.005 32.000 4.00 0.00 0.00 3.77
157 158 5.351233 TCTTTGCATAGTTTACACCAACG 57.649 39.130 4.00 0.00 0.00 4.10
158 159 5.057819 TCTTTGCATAGTTTACACCAACGA 58.942 37.500 4.00 0.00 0.00 3.85
159 160 5.178623 TCTTTGCATAGTTTACACCAACGAG 59.821 40.000 4.00 0.00 0.00 4.18
160 161 2.739913 TGCATAGTTTACACCAACGAGC 59.260 45.455 0.00 0.00 0.00 5.03
161 162 3.000727 GCATAGTTTACACCAACGAGCT 58.999 45.455 0.00 0.00 0.00 4.09
162 163 4.178540 GCATAGTTTACACCAACGAGCTA 58.821 43.478 0.00 0.00 0.00 3.32
163 164 4.032558 GCATAGTTTACACCAACGAGCTAC 59.967 45.833 0.00 0.00 0.00 3.58
164 165 3.738830 AGTTTACACCAACGAGCTACA 57.261 42.857 0.00 0.00 0.00 2.74
165 166 3.650139 AGTTTACACCAACGAGCTACAG 58.350 45.455 0.00 0.00 0.00 2.74
166 167 2.735134 GTTTACACCAACGAGCTACAGG 59.265 50.000 0.00 0.00 0.00 4.00
167 168 1.624336 TACACCAACGAGCTACAGGT 58.376 50.000 0.00 0.00 0.00 4.00
168 169 0.756903 ACACCAACGAGCTACAGGTT 59.243 50.000 0.00 0.00 0.00 3.50
169 170 1.148310 CACCAACGAGCTACAGGTTG 58.852 55.000 10.72 10.72 40.44 3.77
170 171 1.045407 ACCAACGAGCTACAGGTTGA 58.955 50.000 16.50 0.00 42.70 3.18
171 172 1.000955 ACCAACGAGCTACAGGTTGAG 59.999 52.381 16.50 11.03 42.70 3.02
172 173 1.000955 CCAACGAGCTACAGGTTGAGT 59.999 52.381 16.50 0.00 42.70 3.41
173 174 2.061773 CAACGAGCTACAGGTTGAGTG 58.938 52.381 11.78 0.00 42.70 3.51
174 175 1.329256 ACGAGCTACAGGTTGAGTGT 58.671 50.000 2.72 0.00 0.00 3.55
175 176 2.511659 ACGAGCTACAGGTTGAGTGTA 58.488 47.619 2.72 0.00 0.00 2.90
176 177 2.488545 ACGAGCTACAGGTTGAGTGTAG 59.511 50.000 5.99 5.99 46.92 2.74
177 178 2.159366 CGAGCTACAGGTTGAGTGTAGG 60.159 54.545 11.24 0.00 45.14 3.18
179 180 2.960819 GCTACAGGTTGAGTGTAGGTG 58.039 52.381 11.24 0.00 45.14 4.00
180 181 2.299297 GCTACAGGTTGAGTGTAGGTGT 59.701 50.000 11.24 0.00 45.14 4.16
181 182 3.244112 GCTACAGGTTGAGTGTAGGTGTT 60.244 47.826 11.24 0.00 45.14 3.32
182 183 3.470645 ACAGGTTGAGTGTAGGTGTTC 57.529 47.619 0.00 0.00 0.00 3.18
183 184 2.104281 ACAGGTTGAGTGTAGGTGTTCC 59.896 50.000 0.00 0.00 0.00 3.62
184 185 1.697982 AGGTTGAGTGTAGGTGTTCCC 59.302 52.381 0.00 0.00 0.00 3.97
186 187 2.901839 GGTTGAGTGTAGGTGTTCCCTA 59.098 50.000 0.00 0.00 43.87 3.53
187 188 3.056035 GGTTGAGTGTAGGTGTTCCCTAG 60.056 52.174 0.00 0.00 46.75 3.02
188 189 3.537795 TGAGTGTAGGTGTTCCCTAGT 57.462 47.619 0.00 0.00 46.75 2.57
189 190 4.662966 TGAGTGTAGGTGTTCCCTAGTA 57.337 45.455 0.00 0.00 46.75 1.82
190 191 5.001833 TGAGTGTAGGTGTTCCCTAGTAA 57.998 43.478 0.00 0.00 46.75 2.24
191 192 5.396485 TGAGTGTAGGTGTTCCCTAGTAAA 58.604 41.667 0.00 0.00 46.75 2.01
192 193 5.840149 TGAGTGTAGGTGTTCCCTAGTAAAA 59.160 40.000 0.00 0.00 46.75 1.52
193 194 6.014840 TGAGTGTAGGTGTTCCCTAGTAAAAG 60.015 42.308 0.00 0.00 46.75 2.27
194 195 4.934001 GTGTAGGTGTTCCCTAGTAAAAGC 59.066 45.833 0.00 0.00 46.75 3.51
195 196 4.842380 TGTAGGTGTTCCCTAGTAAAAGCT 59.158 41.667 3.32 3.32 46.75 3.74
196 197 4.995624 AGGTGTTCCCTAGTAAAAGCTT 57.004 40.909 0.00 0.00 43.87 3.74
197 198 4.652822 AGGTGTTCCCTAGTAAAAGCTTG 58.347 43.478 0.00 0.00 43.87 4.01
198 199 3.756963 GGTGTTCCCTAGTAAAAGCTTGG 59.243 47.826 0.00 0.00 0.00 3.61
199 200 4.506095 GGTGTTCCCTAGTAAAAGCTTGGA 60.506 45.833 0.00 0.00 34.09 3.53
200 201 5.067954 GTGTTCCCTAGTAAAAGCTTGGAA 58.932 41.667 0.00 3.70 34.09 3.53
201 202 5.181433 GTGTTCCCTAGTAAAAGCTTGGAAG 59.819 44.000 11.33 1.18 34.09 3.46
202 203 5.072600 TGTTCCCTAGTAAAAGCTTGGAAGA 59.927 40.000 11.33 8.38 34.09 2.87
203 204 5.836024 TCCCTAGTAAAAGCTTGGAAGAA 57.164 39.130 0.00 0.00 34.09 2.52
204 205 6.388619 TCCCTAGTAAAAGCTTGGAAGAAT 57.611 37.500 0.00 0.00 34.09 2.40
205 206 6.790319 TCCCTAGTAAAAGCTTGGAAGAATT 58.210 36.000 0.00 0.00 34.09 2.17
206 207 6.659242 TCCCTAGTAAAAGCTTGGAAGAATTG 59.341 38.462 0.00 0.00 34.09 2.32
207 208 6.659242 CCCTAGTAAAAGCTTGGAAGAATTGA 59.341 38.462 0.00 0.00 34.09 2.57
208 209 7.148171 CCCTAGTAAAAGCTTGGAAGAATTGAG 60.148 40.741 0.00 0.00 34.09 3.02
209 210 6.581171 AGTAAAAGCTTGGAAGAATTGAGG 57.419 37.500 0.00 0.00 0.00 3.86
210 211 4.879197 AAAAGCTTGGAAGAATTGAGGG 57.121 40.909 0.00 0.00 0.00 4.30
211 212 3.814504 AAGCTTGGAAGAATTGAGGGA 57.185 42.857 0.00 0.00 0.00 4.20
212 213 3.814504 AGCTTGGAAGAATTGAGGGAA 57.185 42.857 0.00 0.00 0.00 3.97
213 214 4.328118 AGCTTGGAAGAATTGAGGGAAT 57.672 40.909 0.00 0.00 0.00 3.01
214 215 4.021916 AGCTTGGAAGAATTGAGGGAATG 58.978 43.478 0.00 0.00 0.00 2.67
215 216 4.019174 GCTTGGAAGAATTGAGGGAATGA 58.981 43.478 0.00 0.00 0.00 2.57
216 217 4.142293 GCTTGGAAGAATTGAGGGAATGAC 60.142 45.833 0.00 0.00 0.00 3.06
217 218 4.934797 TGGAAGAATTGAGGGAATGACT 57.065 40.909 0.00 0.00 0.00 3.41
218 219 6.387192 TTGGAAGAATTGAGGGAATGACTA 57.613 37.500 0.00 0.00 0.00 2.59
219 220 5.745227 TGGAAGAATTGAGGGAATGACTAC 58.255 41.667 0.00 0.00 0.00 2.73
220 221 5.250543 TGGAAGAATTGAGGGAATGACTACA 59.749 40.000 0.00 0.00 0.00 2.74
221 222 5.819901 GGAAGAATTGAGGGAATGACTACAG 59.180 44.000 0.00 0.00 0.00 2.74
222 223 5.365021 AGAATTGAGGGAATGACTACAGG 57.635 43.478 0.00 0.00 0.00 4.00
223 224 4.785376 AGAATTGAGGGAATGACTACAGGT 59.215 41.667 0.00 0.00 0.00 4.00
224 225 5.251700 AGAATTGAGGGAATGACTACAGGTT 59.748 40.000 0.00 0.00 0.00 3.50
225 226 3.981071 TGAGGGAATGACTACAGGTTG 57.019 47.619 0.00 0.00 0.00 3.77
226 227 2.027192 TGAGGGAATGACTACAGGTTGC 60.027 50.000 0.00 0.00 0.00 4.17
227 228 2.237392 GAGGGAATGACTACAGGTTGCT 59.763 50.000 0.00 0.00 0.00 3.91
228 229 2.237392 AGGGAATGACTACAGGTTGCTC 59.763 50.000 0.00 0.00 0.00 4.26
229 230 2.271800 GGAATGACTACAGGTTGCTCG 58.728 52.381 0.00 0.00 0.00 5.03
230 231 2.094182 GGAATGACTACAGGTTGCTCGA 60.094 50.000 0.00 0.00 0.00 4.04
231 232 2.949451 ATGACTACAGGTTGCTCGAG 57.051 50.000 8.45 8.45 0.00 4.04
232 233 0.243907 TGACTACAGGTTGCTCGAGC 59.756 55.000 30.42 30.42 42.50 5.03
233 234 0.798771 GACTACAGGTTGCTCGAGCG 60.799 60.000 30.75 18.98 45.83 5.03
234 235 1.517257 CTACAGGTTGCTCGAGCGG 60.517 63.158 30.75 19.33 45.83 5.52
235 236 1.934220 CTACAGGTTGCTCGAGCGGA 61.934 60.000 30.75 19.89 45.83 5.54
236 237 1.934220 TACAGGTTGCTCGAGCGGAG 61.934 60.000 30.75 20.26 45.83 4.63
273 274 3.485431 CTGGCTTGCTCGCGTCAG 61.485 66.667 5.77 0.00 0.00 3.51
277 278 3.485431 CTTGCTCGCGTCAGGCTG 61.485 66.667 8.58 8.58 40.44 4.85
281 282 4.803426 CTCGCGTCAGGCTGGGTC 62.803 72.222 15.73 5.02 40.44 4.46
290 291 4.785453 GGCTGGGTCCGGCTGAAG 62.785 72.222 19.00 0.00 46.77 3.02
291 292 4.785453 GCTGGGTCCGGCTGAAGG 62.785 72.222 13.23 0.00 44.39 3.46
292 293 3.322466 CTGGGTCCGGCTGAAGGT 61.322 66.667 0.00 0.00 0.00 3.50
293 294 3.612247 CTGGGTCCGGCTGAAGGTG 62.612 68.421 0.00 0.00 0.00 4.00
294 295 3.637273 GGGTCCGGCTGAAGGTGT 61.637 66.667 0.00 0.00 0.00 4.16
295 296 2.047179 GGTCCGGCTGAAGGTGTC 60.047 66.667 0.00 0.00 0.00 3.67
296 297 2.741092 GTCCGGCTGAAGGTGTCA 59.259 61.111 0.00 0.00 34.17 3.58
297 298 1.296715 GTCCGGCTGAAGGTGTCAT 59.703 57.895 0.00 0.00 35.07 3.06
298 299 0.741221 GTCCGGCTGAAGGTGTCATC 60.741 60.000 0.00 0.00 35.07 2.92
299 300 1.450312 CCGGCTGAAGGTGTCATCC 60.450 63.158 0.00 0.00 38.90 3.51
300 301 4.208632 GGCTGAAGGTGTCATCCG 57.791 61.111 0.00 0.00 32.96 4.18
301 302 1.450312 GGCTGAAGGTGTCATCCGG 60.450 63.158 0.00 0.00 32.96 5.14
302 303 2.109126 GCTGAAGGTGTCATCCGGC 61.109 63.158 0.00 0.00 35.07 6.13
303 304 1.450312 CTGAAGGTGTCATCCGGCC 60.450 63.158 0.00 0.00 35.07 6.13
304 305 2.124695 GAAGGTGTCATCCGGCCC 60.125 66.667 0.00 0.00 0.00 5.80
305 306 2.610859 AAGGTGTCATCCGGCCCT 60.611 61.111 0.00 0.00 0.00 5.19
306 307 2.876368 GAAGGTGTCATCCGGCCCTG 62.876 65.000 0.00 0.00 0.00 4.45
307 308 4.489771 GGTGTCATCCGGCCCTGG 62.490 72.222 0.00 0.00 0.00 4.45
347 348 3.946907 GCCTCGTGCGTGTAGTTT 58.053 55.556 0.00 0.00 0.00 2.66
348 349 1.491563 GCCTCGTGCGTGTAGTTTG 59.508 57.895 0.00 0.00 0.00 2.93
349 350 1.491563 CCTCGTGCGTGTAGTTTGC 59.508 57.895 0.00 0.00 0.00 3.68
350 351 1.491563 CTCGTGCGTGTAGTTTGCC 59.508 57.895 0.00 0.00 0.00 4.52
351 352 1.897398 CTCGTGCGTGTAGTTTGCCC 61.897 60.000 0.00 0.00 0.00 5.36
352 353 2.554272 GTGCGTGTAGTTTGCCCG 59.446 61.111 0.00 0.00 0.00 6.13
353 354 2.666862 TGCGTGTAGTTTGCCCGG 60.667 61.111 0.00 0.00 0.00 5.73
354 355 4.097863 GCGTGTAGTTTGCCCGGC 62.098 66.667 1.04 1.04 0.00 6.13
355 356 2.358247 CGTGTAGTTTGCCCGGCT 60.358 61.111 11.61 0.00 0.00 5.52
356 357 2.677003 CGTGTAGTTTGCCCGGCTG 61.677 63.158 11.61 0.00 0.00 4.85
357 358 1.599797 GTGTAGTTTGCCCGGCTGT 60.600 57.895 11.61 0.00 0.00 4.40
358 359 1.599518 TGTAGTTTGCCCGGCTGTG 60.600 57.895 11.61 0.00 0.00 3.66
359 360 2.671619 TAGTTTGCCCGGCTGTGC 60.672 61.111 11.61 0.00 0.00 4.57
395 396 4.500116 GCTGGTCGGCCTCTCGTC 62.500 72.222 7.97 0.00 35.27 4.20
396 397 4.180946 CTGGTCGGCCTCTCGTCG 62.181 72.222 7.97 0.00 35.27 5.12
399 400 4.194720 GTCGGCCTCTCGTCGCAT 62.195 66.667 0.00 0.00 0.00 4.73
400 401 4.193334 TCGGCCTCTCGTCGCATG 62.193 66.667 0.00 0.00 0.00 4.06
404 405 2.951745 CCTCTCGTCGCATGCGTC 60.952 66.667 36.50 30.32 40.74 5.19
405 406 2.101185 CTCTCGTCGCATGCGTCT 59.899 61.111 36.50 0.00 40.74 4.18
406 407 2.202479 TCTCGTCGCATGCGTCTG 60.202 61.111 36.50 26.36 40.74 3.51
407 408 2.504899 CTCGTCGCATGCGTCTGT 60.505 61.111 36.50 0.00 40.74 3.41
408 409 2.049526 TCGTCGCATGCGTCTGTT 60.050 55.556 36.50 0.00 40.74 3.16
409 410 2.002963 CTCGTCGCATGCGTCTGTTC 62.003 60.000 36.50 19.70 40.74 3.18
410 411 2.391821 GTCGCATGCGTCTGTTCG 59.608 61.111 36.50 9.30 40.74 3.95
411 412 2.809174 TCGCATGCGTCTGTTCGG 60.809 61.111 36.50 8.54 40.74 4.30
412 413 3.112075 CGCATGCGTCTGTTCGGT 61.112 61.111 31.33 0.00 34.35 4.69
413 414 2.667318 CGCATGCGTCTGTTCGGTT 61.667 57.895 31.33 0.00 34.35 4.44
414 415 1.132640 GCATGCGTCTGTTCGGTTC 59.867 57.895 0.00 0.00 0.00 3.62
415 416 1.787847 CATGCGTCTGTTCGGTTCC 59.212 57.895 0.00 0.00 0.00 3.62
416 417 1.375523 ATGCGTCTGTTCGGTTCCC 60.376 57.895 0.00 0.00 0.00 3.97
456 457 2.174349 GCCTTGCGCGTTTGAGAG 59.826 61.111 8.43 0.00 0.00 3.20
457 458 2.863153 CCTTGCGCGTTTGAGAGG 59.137 61.111 8.43 2.60 0.00 3.69
458 459 1.961277 CCTTGCGCGTTTGAGAGGT 60.961 57.895 8.43 0.00 0.00 3.85
459 460 1.205064 CTTGCGCGTTTGAGAGGTG 59.795 57.895 8.43 0.00 0.00 4.00
460 461 1.498865 CTTGCGCGTTTGAGAGGTGT 61.499 55.000 8.43 0.00 0.00 4.16
461 462 1.092921 TTGCGCGTTTGAGAGGTGTT 61.093 50.000 8.43 0.00 0.00 3.32
462 463 1.092921 TGCGCGTTTGAGAGGTGTTT 61.093 50.000 8.43 0.00 0.00 2.83
463 464 0.657368 GCGCGTTTGAGAGGTGTTTG 60.657 55.000 8.43 0.00 0.00 2.93
464 465 0.657368 CGCGTTTGAGAGGTGTTTGC 60.657 55.000 0.00 0.00 0.00 3.68
465 466 0.317854 GCGTTTGAGAGGTGTTTGCC 60.318 55.000 0.00 0.00 0.00 4.52
466 467 1.021202 CGTTTGAGAGGTGTTTGCCA 58.979 50.000 0.00 0.00 0.00 4.92
467 468 1.002468 CGTTTGAGAGGTGTTTGCCAG 60.002 52.381 0.00 0.00 0.00 4.85
468 469 1.338020 GTTTGAGAGGTGTTTGCCAGG 59.662 52.381 0.00 0.00 0.00 4.45
469 470 0.178992 TTGAGAGGTGTTTGCCAGGG 60.179 55.000 0.00 0.00 0.00 4.45
470 471 1.973812 GAGAGGTGTTTGCCAGGGC 60.974 63.158 2.62 2.62 42.35 5.19
471 472 2.116125 GAGGTGTTTGCCAGGGCT 59.884 61.111 12.19 0.00 42.51 5.19
472 473 1.973812 GAGGTGTTTGCCAGGGCTC 60.974 63.158 12.19 3.16 42.51 4.70
473 474 2.116125 GGTGTTTGCCAGGGCTCT 59.884 61.111 12.19 0.00 42.51 4.09
474 475 1.531602 GGTGTTTGCCAGGGCTCTT 60.532 57.895 12.19 0.00 42.51 2.85
475 476 1.115326 GGTGTTTGCCAGGGCTCTTT 61.115 55.000 12.19 0.00 42.51 2.52
476 477 0.032540 GTGTTTGCCAGGGCTCTTTG 59.967 55.000 12.19 0.00 42.51 2.77
477 478 1.005748 GTTTGCCAGGGCTCTTTGC 60.006 57.895 12.19 0.00 42.51 3.68
499 500 3.458163 CCGGGCACGAGGAGCTTA 61.458 66.667 11.66 0.00 44.60 3.09
500 501 2.202756 CGGGCACGAGGAGCTTAC 60.203 66.667 0.00 0.00 44.60 2.34
501 502 2.978824 GGGCACGAGGAGCTTACA 59.021 61.111 0.00 0.00 0.00 2.41
502 503 1.522569 GGGCACGAGGAGCTTACAT 59.477 57.895 0.00 0.00 0.00 2.29
503 504 0.811616 GGGCACGAGGAGCTTACATG 60.812 60.000 0.00 0.00 0.00 3.21
504 505 0.811616 GGCACGAGGAGCTTACATGG 60.812 60.000 0.00 0.00 0.00 3.66
505 506 1.432270 GCACGAGGAGCTTACATGGC 61.432 60.000 0.00 0.00 0.00 4.40
506 507 1.141881 ACGAGGAGCTTACATGGCG 59.858 57.895 0.00 0.00 34.52 5.69
507 508 2.240500 CGAGGAGCTTACATGGCGC 61.241 63.158 0.00 0.00 34.52 6.53
509 510 3.272334 GGAGCTTACATGGCGCCG 61.272 66.667 23.90 11.34 39.56 6.46
510 511 3.272334 GAGCTTACATGGCGCCGG 61.272 66.667 23.90 19.33 34.52 6.13
513 514 3.272334 CTTACATGGCGCCGGCTC 61.272 66.667 26.68 18.12 39.81 4.70
531 532 4.025401 GGCTTGCGACCGTTGGTG 62.025 66.667 0.00 0.00 35.25 4.17
532 533 4.683334 GCTTGCGACCGTTGGTGC 62.683 66.667 0.00 0.00 35.25 5.01
533 534 2.972505 CTTGCGACCGTTGGTGCT 60.973 61.111 0.00 0.00 35.25 4.40
534 535 3.240606 CTTGCGACCGTTGGTGCTG 62.241 63.158 0.00 0.00 35.25 4.41
609 610 7.333672 GTCTCGGAACAATAAAATAGAACCTGT 59.666 37.037 0.00 0.00 0.00 4.00
823 824 0.103755 GAGCATGCAGTCGATCCTGA 59.896 55.000 21.98 0.00 34.23 3.86
1128 1133 4.479158 ACTACCCATTTCCATTGTTGTGT 58.521 39.130 0.00 0.00 0.00 3.72
1144 1149 6.841443 TGTTGTGTTTTCTAAAATGGCATG 57.159 33.333 0.00 0.00 0.00 4.06
1253 1258 5.494724 ACTGAGTACTCGGTATAACTCACA 58.505 41.667 31.58 3.90 46.57 3.58
1404 1409 5.118203 GGATTTACGCCGTATATCAACAGAC 59.882 44.000 22.91 6.77 31.39 3.51
1677 1757 1.164041 AAAGAGTTTCCACGGGCGTG 61.164 55.000 0.00 0.00 45.02 5.34
1745 1825 4.907875 TCCTTCCATTCTTCCTAGTATGGG 59.092 45.833 9.88 0.00 44.91 4.00
1984 2064 5.224888 CCTTACTTACGACTGTTGCACTTA 58.775 41.667 0.00 0.00 0.00 2.24
1985 2065 5.693104 CCTTACTTACGACTGTTGCACTTAA 59.307 40.000 0.00 0.00 0.00 1.85
1986 2066 6.201425 CCTTACTTACGACTGTTGCACTTAAA 59.799 38.462 0.00 0.00 0.00 1.52
1987 2067 7.095355 CCTTACTTACGACTGTTGCACTTAAAT 60.095 37.037 0.00 0.00 0.00 1.40
1988 2068 5.985781 ACTTACGACTGTTGCACTTAAATG 58.014 37.500 0.00 0.00 0.00 2.32
1989 2069 3.896648 ACGACTGTTGCACTTAAATGG 57.103 42.857 0.00 0.00 0.00 3.16
1990 2070 3.211045 ACGACTGTTGCACTTAAATGGT 58.789 40.909 0.00 0.00 0.00 3.55
1991 2071 4.382291 ACGACTGTTGCACTTAAATGGTA 58.618 39.130 0.00 0.00 0.00 3.25
1992 2072 5.001232 ACGACTGTTGCACTTAAATGGTAT 58.999 37.500 0.00 0.00 0.00 2.73
1993 2073 6.167685 ACGACTGTTGCACTTAAATGGTATA 58.832 36.000 0.00 0.00 0.00 1.47
1994 2074 6.651643 ACGACTGTTGCACTTAAATGGTATAA 59.348 34.615 0.00 0.00 0.00 0.98
1995 2075 6.959311 CGACTGTTGCACTTAAATGGTATAAC 59.041 38.462 0.00 0.00 0.00 1.89
1996 2076 6.837992 ACTGTTGCACTTAAATGGTATAACG 58.162 36.000 0.00 0.00 0.00 3.18
1997 2077 6.651643 ACTGTTGCACTTAAATGGTATAACGA 59.348 34.615 0.00 0.00 0.00 3.85
1998 2078 7.173562 ACTGTTGCACTTAAATGGTATAACGAA 59.826 33.333 0.00 0.00 0.00 3.85
1999 2079 7.299586 TGTTGCACTTAAATGGTATAACGAAC 58.700 34.615 0.00 0.00 0.00 3.95
2000 2080 7.041303 TGTTGCACTTAAATGGTATAACGAACA 60.041 33.333 0.00 0.00 0.00 3.18
2001 2081 6.833839 TGCACTTAAATGGTATAACGAACAC 58.166 36.000 0.00 0.00 0.00 3.32
2002 2082 6.128227 TGCACTTAAATGGTATAACGAACACC 60.128 38.462 0.00 0.00 0.00 4.16
2003 2083 6.128227 GCACTTAAATGGTATAACGAACACCA 60.128 38.462 0.00 0.00 45.96 4.17
2004 2084 7.461107 CACTTAAATGGTATAACGAACACCAG 58.539 38.462 0.00 0.00 45.15 4.00
2105 2185 7.197071 TCAAACATTGCGTTCTACACTTTAT 57.803 32.000 0.00 0.00 36.59 1.40
2259 2572 3.572632 AGTCTATCGTACTAGGTGGCA 57.427 47.619 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.497785 TTTCAACGACTTGAACAAACCTTA 57.502 33.333 1.02 0.00 44.48 2.69
1 2 5.379732 TTTCAACGACTTGAACAAACCTT 57.620 34.783 1.02 0.00 44.48 3.50
2 3 5.158494 GTTTTCAACGACTTGAACAAACCT 58.842 37.500 1.02 0.00 44.48 3.50
3 4 5.430220 GTTTTCAACGACTTGAACAAACC 57.570 39.130 1.02 0.00 44.48 3.27
17 18 1.285950 GGGCCAGCTCGTTTTCAAC 59.714 57.895 4.39 0.00 0.00 3.18
18 19 1.901464 GGGGCCAGCTCGTTTTCAA 60.901 57.895 4.39 0.00 0.00 2.69
19 20 2.282180 GGGGCCAGCTCGTTTTCA 60.282 61.111 4.39 0.00 0.00 2.69
20 21 1.587043 GAAGGGGCCAGCTCGTTTTC 61.587 60.000 4.39 0.00 0.00 2.29
21 22 1.603739 GAAGGGGCCAGCTCGTTTT 60.604 57.895 4.39 0.00 0.00 2.43
22 23 2.034221 GAAGGGGCCAGCTCGTTT 59.966 61.111 4.39 0.00 0.00 3.60
23 24 4.035102 GGAAGGGGCCAGCTCGTT 62.035 66.667 4.39 0.00 0.00 3.85
26 27 3.569200 AAACGGAAGGGGCCAGCTC 62.569 63.158 4.39 0.00 0.00 4.09
27 28 3.580319 AAACGGAAGGGGCCAGCT 61.580 61.111 4.39 0.00 0.00 4.24
28 29 3.373565 CAAACGGAAGGGGCCAGC 61.374 66.667 4.39 0.00 0.00 4.85
29 30 2.478335 TAGCAAACGGAAGGGGCCAG 62.478 60.000 4.39 0.00 0.00 4.85
30 31 1.858739 ATAGCAAACGGAAGGGGCCA 61.859 55.000 4.39 0.00 0.00 5.36
79 80 0.929244 AGGTTGAATCCCATCCCAGG 59.071 55.000 0.00 0.00 35.65 4.45
83 84 2.178580 TGCAAAGGTTGAATCCCATCC 58.821 47.619 0.00 0.00 35.34 3.51
84 85 4.476628 AATGCAAAGGTTGAATCCCATC 57.523 40.909 0.00 0.00 0.00 3.51
85 86 4.914177 AAATGCAAAGGTTGAATCCCAT 57.086 36.364 0.00 0.00 0.00 4.00
86 87 4.504689 GGAAAATGCAAAGGTTGAATCCCA 60.505 41.667 0.00 0.00 0.00 4.37
87 88 4.002982 GGAAAATGCAAAGGTTGAATCCC 58.997 43.478 0.00 0.00 0.00 3.85
88 89 4.898320 AGGAAAATGCAAAGGTTGAATCC 58.102 39.130 0.00 0.00 0.00 3.01
89 90 5.179929 CCAAGGAAAATGCAAAGGTTGAATC 59.820 40.000 0.00 0.00 0.00 2.52
90 91 5.065235 CCAAGGAAAATGCAAAGGTTGAAT 58.935 37.500 0.00 0.00 0.00 2.57
91 92 4.080638 ACCAAGGAAAATGCAAAGGTTGAA 60.081 37.500 0.00 0.00 0.00 2.69
92 93 3.454082 ACCAAGGAAAATGCAAAGGTTGA 59.546 39.130 0.00 0.00 0.00 3.18
93 94 3.807553 ACCAAGGAAAATGCAAAGGTTG 58.192 40.909 0.00 0.00 0.00 3.77
94 95 3.492482 CGACCAAGGAAAATGCAAAGGTT 60.492 43.478 0.00 0.00 0.00 3.50
95 96 2.035832 CGACCAAGGAAAATGCAAAGGT 59.964 45.455 0.00 0.00 0.00 3.50
96 97 2.035832 ACGACCAAGGAAAATGCAAAGG 59.964 45.455 0.00 0.00 0.00 3.11
97 98 3.369546 ACGACCAAGGAAAATGCAAAG 57.630 42.857 0.00 0.00 0.00 2.77
98 99 4.764823 AGATACGACCAAGGAAAATGCAAA 59.235 37.500 0.00 0.00 0.00 3.68
99 100 4.331968 AGATACGACCAAGGAAAATGCAA 58.668 39.130 0.00 0.00 0.00 4.08
100 101 3.950397 AGATACGACCAAGGAAAATGCA 58.050 40.909 0.00 0.00 0.00 3.96
101 102 4.394920 TGAAGATACGACCAAGGAAAATGC 59.605 41.667 0.00 0.00 0.00 3.56
102 103 5.643777 ACTGAAGATACGACCAAGGAAAATG 59.356 40.000 0.00 0.00 0.00 2.32
103 104 5.805728 ACTGAAGATACGACCAAGGAAAAT 58.194 37.500 0.00 0.00 0.00 1.82
104 105 5.223449 ACTGAAGATACGACCAAGGAAAA 57.777 39.130 0.00 0.00 0.00 2.29
105 106 4.884668 ACTGAAGATACGACCAAGGAAA 57.115 40.909 0.00 0.00 0.00 3.13
106 107 4.884668 AACTGAAGATACGACCAAGGAA 57.115 40.909 0.00 0.00 0.00 3.36
107 108 4.884668 AAACTGAAGATACGACCAAGGA 57.115 40.909 0.00 0.00 0.00 3.36
108 109 7.611213 ATTTAAACTGAAGATACGACCAAGG 57.389 36.000 0.00 0.00 0.00 3.61
109 110 9.893305 AAAATTTAAACTGAAGATACGACCAAG 57.107 29.630 0.00 0.00 0.00 3.61
110 111 9.887406 GAAAATTTAAACTGAAGATACGACCAA 57.113 29.630 0.00 0.00 0.00 3.67
111 112 9.280174 AGAAAATTTAAACTGAAGATACGACCA 57.720 29.630 0.00 0.00 0.00 4.02
129 130 9.606631 TTGGTGTAAACTATGCAAAGAAAATTT 57.393 25.926 0.00 0.00 0.00 1.82
130 131 9.040939 GTTGGTGTAAACTATGCAAAGAAAATT 57.959 29.630 0.00 0.00 0.00 1.82
131 132 7.381139 CGTTGGTGTAAACTATGCAAAGAAAAT 59.619 33.333 0.00 0.00 0.00 1.82
132 133 6.693545 CGTTGGTGTAAACTATGCAAAGAAAA 59.306 34.615 0.00 0.00 0.00 2.29
133 134 6.038382 TCGTTGGTGTAAACTATGCAAAGAAA 59.962 34.615 0.00 0.00 0.00 2.52
134 135 5.527951 TCGTTGGTGTAAACTATGCAAAGAA 59.472 36.000 0.00 0.00 0.00 2.52
135 136 5.057819 TCGTTGGTGTAAACTATGCAAAGA 58.942 37.500 0.00 0.00 0.00 2.52
136 137 5.351233 TCGTTGGTGTAAACTATGCAAAG 57.649 39.130 0.00 0.00 0.00 2.77
137 138 4.319911 GCTCGTTGGTGTAAACTATGCAAA 60.320 41.667 0.00 0.00 0.00 3.68
138 139 3.187637 GCTCGTTGGTGTAAACTATGCAA 59.812 43.478 0.00 0.00 0.00 4.08
139 140 2.739913 GCTCGTTGGTGTAAACTATGCA 59.260 45.455 0.00 0.00 0.00 3.96
140 141 3.000727 AGCTCGTTGGTGTAAACTATGC 58.999 45.455 0.00 0.00 0.00 3.14
141 142 5.165676 TGTAGCTCGTTGGTGTAAACTATG 58.834 41.667 0.00 0.00 0.00 2.23
142 143 5.395682 TGTAGCTCGTTGGTGTAAACTAT 57.604 39.130 0.00 0.00 0.00 2.12
143 144 4.321452 CCTGTAGCTCGTTGGTGTAAACTA 60.321 45.833 0.00 0.00 0.00 2.24
144 145 3.554337 CCTGTAGCTCGTTGGTGTAAACT 60.554 47.826 0.00 0.00 0.00 2.66
145 146 2.735134 CCTGTAGCTCGTTGGTGTAAAC 59.265 50.000 0.00 0.00 0.00 2.01
146 147 2.366266 ACCTGTAGCTCGTTGGTGTAAA 59.634 45.455 0.00 0.00 0.00 2.01
147 148 1.965643 ACCTGTAGCTCGTTGGTGTAA 59.034 47.619 0.00 0.00 0.00 2.41
148 149 1.624336 ACCTGTAGCTCGTTGGTGTA 58.376 50.000 0.00 0.00 0.00 2.90
149 150 0.756903 AACCTGTAGCTCGTTGGTGT 59.243 50.000 0.00 0.00 0.00 4.16
150 151 1.148310 CAACCTGTAGCTCGTTGGTG 58.852 55.000 0.00 0.00 34.55 4.17
151 152 1.000955 CTCAACCTGTAGCTCGTTGGT 59.999 52.381 13.00 5.69 37.93 3.67
152 153 1.000955 ACTCAACCTGTAGCTCGTTGG 59.999 52.381 13.00 5.17 37.93 3.77
153 154 2.061773 CACTCAACCTGTAGCTCGTTG 58.938 52.381 0.00 0.00 38.56 4.10
154 155 1.687123 ACACTCAACCTGTAGCTCGTT 59.313 47.619 0.00 0.00 0.00 3.85
155 156 1.329256 ACACTCAACCTGTAGCTCGT 58.671 50.000 0.00 0.00 0.00 4.18
156 157 2.159366 CCTACACTCAACCTGTAGCTCG 60.159 54.545 0.00 0.00 39.83 5.03
157 158 2.826725 ACCTACACTCAACCTGTAGCTC 59.173 50.000 0.00 0.00 39.83 4.09
158 159 2.563179 CACCTACACTCAACCTGTAGCT 59.437 50.000 0.00 0.00 39.83 3.32
159 160 2.299297 ACACCTACACTCAACCTGTAGC 59.701 50.000 0.81 0.00 39.83 3.58
160 161 4.557205 GAACACCTACACTCAACCTGTAG 58.443 47.826 0.00 0.00 40.54 2.74
161 162 3.322828 GGAACACCTACACTCAACCTGTA 59.677 47.826 0.00 0.00 0.00 2.74
162 163 2.104281 GGAACACCTACACTCAACCTGT 59.896 50.000 0.00 0.00 0.00 4.00
163 164 2.550208 GGGAACACCTACACTCAACCTG 60.550 54.545 0.00 0.00 35.85 4.00
164 165 1.697982 GGGAACACCTACACTCAACCT 59.302 52.381 0.00 0.00 35.85 3.50
165 166 2.180432 GGGAACACCTACACTCAACC 57.820 55.000 0.00 0.00 35.85 3.77
176 177 3.756963 CCAAGCTTTTACTAGGGAACACC 59.243 47.826 0.00 0.00 40.67 4.16
177 178 4.648651 TCCAAGCTTTTACTAGGGAACAC 58.351 43.478 0.00 0.00 0.00 3.32
178 179 4.986054 TCCAAGCTTTTACTAGGGAACA 57.014 40.909 0.00 0.00 0.00 3.18
179 180 5.557866 TCTTCCAAGCTTTTACTAGGGAAC 58.442 41.667 7.82 0.00 32.71 3.62
180 181 5.836024 TCTTCCAAGCTTTTACTAGGGAA 57.164 39.130 10.68 10.68 34.15 3.97
181 182 5.836024 TTCTTCCAAGCTTTTACTAGGGA 57.164 39.130 0.00 0.00 0.00 4.20
182 183 6.659242 TCAATTCTTCCAAGCTTTTACTAGGG 59.341 38.462 0.00 0.00 0.00 3.53
183 184 7.148171 CCTCAATTCTTCCAAGCTTTTACTAGG 60.148 40.741 0.00 0.00 0.00 3.02
184 185 7.148171 CCCTCAATTCTTCCAAGCTTTTACTAG 60.148 40.741 0.00 0.00 0.00 2.57
185 186 6.659242 CCCTCAATTCTTCCAAGCTTTTACTA 59.341 38.462 0.00 0.00 0.00 1.82
186 187 5.478332 CCCTCAATTCTTCCAAGCTTTTACT 59.522 40.000 0.00 0.00 0.00 2.24
187 188 5.476945 TCCCTCAATTCTTCCAAGCTTTTAC 59.523 40.000 0.00 0.00 0.00 2.01
188 189 5.640147 TCCCTCAATTCTTCCAAGCTTTTA 58.360 37.500 0.00 0.00 0.00 1.52
189 190 4.482990 TCCCTCAATTCTTCCAAGCTTTT 58.517 39.130 0.00 0.00 0.00 2.27
190 191 4.118168 TCCCTCAATTCTTCCAAGCTTT 57.882 40.909 0.00 0.00 0.00 3.51
191 192 3.814504 TCCCTCAATTCTTCCAAGCTT 57.185 42.857 0.00 0.00 0.00 3.74
192 193 3.814504 TTCCCTCAATTCTTCCAAGCT 57.185 42.857 0.00 0.00 0.00 3.74
193 194 4.019174 TCATTCCCTCAATTCTTCCAAGC 58.981 43.478 0.00 0.00 0.00 4.01
194 195 5.259632 AGTCATTCCCTCAATTCTTCCAAG 58.740 41.667 0.00 0.00 0.00 3.61
195 196 5.261040 AGTCATTCCCTCAATTCTTCCAA 57.739 39.130 0.00 0.00 0.00 3.53
196 197 4.934797 AGTCATTCCCTCAATTCTTCCA 57.065 40.909 0.00 0.00 0.00 3.53
197 198 5.745227 TGTAGTCATTCCCTCAATTCTTCC 58.255 41.667 0.00 0.00 0.00 3.46
198 199 5.819901 CCTGTAGTCATTCCCTCAATTCTTC 59.180 44.000 0.00 0.00 0.00 2.87
199 200 5.251700 ACCTGTAGTCATTCCCTCAATTCTT 59.748 40.000 0.00 0.00 0.00 2.52
200 201 4.785376 ACCTGTAGTCATTCCCTCAATTCT 59.215 41.667 0.00 0.00 0.00 2.40
201 202 5.104259 ACCTGTAGTCATTCCCTCAATTC 57.896 43.478 0.00 0.00 0.00 2.17
202 203 5.256474 CAACCTGTAGTCATTCCCTCAATT 58.744 41.667 0.00 0.00 0.00 2.32
203 204 4.848357 CAACCTGTAGTCATTCCCTCAAT 58.152 43.478 0.00 0.00 0.00 2.57
204 205 3.559171 GCAACCTGTAGTCATTCCCTCAA 60.559 47.826 0.00 0.00 0.00 3.02
205 206 2.027192 GCAACCTGTAGTCATTCCCTCA 60.027 50.000 0.00 0.00 0.00 3.86
206 207 2.237392 AGCAACCTGTAGTCATTCCCTC 59.763 50.000 0.00 0.00 0.00 4.30
207 208 2.237392 GAGCAACCTGTAGTCATTCCCT 59.763 50.000 0.00 0.00 0.00 4.20
208 209 2.633488 GAGCAACCTGTAGTCATTCCC 58.367 52.381 0.00 0.00 0.00 3.97
209 210 2.094182 TCGAGCAACCTGTAGTCATTCC 60.094 50.000 0.00 0.00 0.00 3.01
210 211 3.182967 CTCGAGCAACCTGTAGTCATTC 58.817 50.000 0.00 0.00 0.00 2.67
211 212 2.675317 GCTCGAGCAACCTGTAGTCATT 60.675 50.000 31.91 0.00 41.59 2.57
212 213 1.134965 GCTCGAGCAACCTGTAGTCAT 60.135 52.381 31.91 0.00 41.59 3.06
213 214 0.243907 GCTCGAGCAACCTGTAGTCA 59.756 55.000 31.91 0.00 41.59 3.41
214 215 0.798771 CGCTCGAGCAACCTGTAGTC 60.799 60.000 34.69 3.26 42.21 2.59
215 216 1.213013 CGCTCGAGCAACCTGTAGT 59.787 57.895 34.69 0.00 42.21 2.73
216 217 1.517257 CCGCTCGAGCAACCTGTAG 60.517 63.158 34.69 16.79 42.21 2.74
217 218 1.934220 CTCCGCTCGAGCAACCTGTA 61.934 60.000 34.69 11.78 42.21 2.74
218 219 3.288308 CTCCGCTCGAGCAACCTGT 62.288 63.158 34.69 0.00 42.21 4.00
219 220 2.507992 CTCCGCTCGAGCAACCTG 60.508 66.667 34.69 18.93 42.21 4.00
256 257 3.485431 CTGACGCGAGCAAGCCAG 61.485 66.667 15.93 4.26 0.00 4.85
260 261 3.485431 CAGCCTGACGCGAGCAAG 61.485 66.667 15.93 5.48 44.76 4.01
264 265 4.803426 GACCCAGCCTGACGCGAG 62.803 72.222 15.93 0.00 44.76 5.03
273 274 4.785453 CTTCAGCCGGACCCAGCC 62.785 72.222 5.05 0.00 0.00 4.85
274 275 4.785453 CCTTCAGCCGGACCCAGC 62.785 72.222 5.05 0.00 0.00 4.85
275 276 3.322466 ACCTTCAGCCGGACCCAG 61.322 66.667 5.05 0.00 0.00 4.45
276 277 3.636231 CACCTTCAGCCGGACCCA 61.636 66.667 5.05 0.00 0.00 4.51
277 278 3.607370 GACACCTTCAGCCGGACCC 62.607 68.421 5.05 0.00 0.00 4.46
278 279 2.047179 GACACCTTCAGCCGGACC 60.047 66.667 5.05 0.00 0.00 4.46
279 280 0.741221 GATGACACCTTCAGCCGGAC 60.741 60.000 5.05 0.00 37.77 4.79
280 281 1.596934 GATGACACCTTCAGCCGGA 59.403 57.895 5.05 0.00 37.77 5.14
281 282 4.208632 GATGACACCTTCAGCCGG 57.791 61.111 0.00 0.00 37.77 6.13
284 285 2.109126 GCCGGATGACACCTTCAGC 61.109 63.158 5.05 0.00 40.16 4.26
285 286 1.450312 GGCCGGATGACACCTTCAG 60.450 63.158 5.05 0.00 37.77 3.02
286 287 2.668632 GGCCGGATGACACCTTCA 59.331 61.111 5.05 0.00 39.11 3.02
287 288 2.124695 GGGCCGGATGACACCTTC 60.125 66.667 5.05 0.00 0.00 3.46
288 289 2.610859 AGGGCCGGATGACACCTT 60.611 61.111 5.05 0.00 0.00 3.50
289 290 3.402681 CAGGGCCGGATGACACCT 61.403 66.667 5.05 0.00 0.00 4.00
290 291 4.489771 CCAGGGCCGGATGACACC 62.490 72.222 5.05 0.00 0.00 4.16
317 318 4.908877 GAGGCTCGCGCTACCGAC 62.909 72.222 5.56 0.61 36.29 4.79
326 327 4.771356 TACACGCACGAGGCTCGC 62.771 66.667 34.76 19.52 45.12 5.03
327 328 2.577112 CTACACGCACGAGGCTCG 60.577 66.667 33.42 33.42 46.93 5.03
328 329 0.666577 AAACTACACGCACGAGGCTC 60.667 55.000 3.87 3.87 41.67 4.70
329 330 0.944311 CAAACTACACGCACGAGGCT 60.944 55.000 0.00 0.00 41.67 4.58
330 331 1.491563 CAAACTACACGCACGAGGC 59.508 57.895 0.00 0.00 39.90 4.70
331 332 1.491563 GCAAACTACACGCACGAGG 59.508 57.895 0.00 0.00 0.00 4.63
332 333 1.491563 GGCAAACTACACGCACGAG 59.508 57.895 0.00 0.00 0.00 4.18
333 334 1.957186 GGGCAAACTACACGCACGA 60.957 57.895 0.00 0.00 0.00 4.35
334 335 2.554272 GGGCAAACTACACGCACG 59.446 61.111 0.00 0.00 0.00 5.34
335 336 2.554272 CGGGCAAACTACACGCAC 59.446 61.111 0.00 0.00 0.00 5.34
336 337 2.666862 CCGGGCAAACTACACGCA 60.667 61.111 0.00 0.00 0.00 5.24
337 338 4.097863 GCCGGGCAAACTACACGC 62.098 66.667 15.62 0.00 0.00 5.34
338 339 2.358247 AGCCGGGCAAACTACACG 60.358 61.111 23.09 0.00 0.00 4.49
339 340 1.599797 ACAGCCGGGCAAACTACAC 60.600 57.895 23.09 0.00 0.00 2.90
340 341 1.599518 CACAGCCGGGCAAACTACA 60.600 57.895 23.09 0.00 0.00 2.74
341 342 2.978018 GCACAGCCGGGCAAACTAC 61.978 63.158 23.09 1.20 0.00 2.73
342 343 2.671619 GCACAGCCGGGCAAACTA 60.672 61.111 23.09 0.00 0.00 2.24
378 379 4.500116 GACGAGAGGCCGACCAGC 62.500 72.222 0.00 0.00 39.06 4.85
379 380 4.180946 CGACGAGAGGCCGACCAG 62.181 72.222 0.00 0.00 39.06 4.00
382 383 4.194720 ATGCGACGAGAGGCCGAC 62.195 66.667 0.00 0.00 33.32 4.79
383 384 4.193334 CATGCGACGAGAGGCCGA 62.193 66.667 0.00 0.00 33.32 5.54
387 388 2.951745 GACGCATGCGACGAGAGG 60.952 66.667 43.72 15.14 42.83 3.69
388 389 2.101185 AGACGCATGCGACGAGAG 59.899 61.111 43.72 15.93 42.83 3.20
389 390 2.202479 CAGACGCATGCGACGAGA 60.202 61.111 43.72 0.00 42.83 4.04
390 391 2.002963 GAACAGACGCATGCGACGAG 62.003 60.000 43.72 33.23 42.83 4.18
391 392 2.049526 AACAGACGCATGCGACGA 60.050 55.556 43.72 0.00 42.83 4.20
392 393 2.391821 GAACAGACGCATGCGACG 59.608 61.111 43.72 31.64 42.83 5.12
393 394 2.391821 CGAACAGACGCATGCGAC 59.608 61.111 43.72 36.83 42.83 5.19
394 395 2.809174 CCGAACAGACGCATGCGA 60.809 61.111 43.72 0.00 42.83 5.10
395 396 2.548587 GAACCGAACAGACGCATGCG 62.549 60.000 36.79 36.79 46.03 4.73
396 397 1.132640 GAACCGAACAGACGCATGC 59.867 57.895 7.91 7.91 0.00 4.06
397 398 1.635663 GGGAACCGAACAGACGCATG 61.636 60.000 0.00 0.00 40.86 4.06
398 399 1.375523 GGGAACCGAACAGACGCAT 60.376 57.895 0.00 0.00 40.86 4.73
399 400 2.029964 GGGAACCGAACAGACGCA 59.970 61.111 0.00 0.00 40.86 5.24
439 440 2.174349 CTCTCAAACGCGCAAGGC 59.826 61.111 5.73 0.00 38.69 4.35
440 441 1.961277 ACCTCTCAAACGCGCAAGG 60.961 57.895 5.73 6.75 38.28 3.61
441 442 1.205064 CACCTCTCAAACGCGCAAG 59.795 57.895 5.73 0.00 43.44 4.01
442 443 1.092921 AACACCTCTCAAACGCGCAA 61.093 50.000 5.73 0.00 0.00 4.85
443 444 1.092921 AAACACCTCTCAAACGCGCA 61.093 50.000 5.73 0.00 0.00 6.09
444 445 0.657368 CAAACACCTCTCAAACGCGC 60.657 55.000 5.73 0.00 0.00 6.86
445 446 0.657368 GCAAACACCTCTCAAACGCG 60.657 55.000 3.53 3.53 0.00 6.01
446 447 0.317854 GGCAAACACCTCTCAAACGC 60.318 55.000 0.00 0.00 0.00 4.84
447 448 1.002468 CTGGCAAACACCTCTCAAACG 60.002 52.381 0.00 0.00 0.00 3.60
448 449 1.338020 CCTGGCAAACACCTCTCAAAC 59.662 52.381 0.00 0.00 0.00 2.93
449 450 1.691196 CCTGGCAAACACCTCTCAAA 58.309 50.000 0.00 0.00 0.00 2.69
450 451 0.178992 CCCTGGCAAACACCTCTCAA 60.179 55.000 0.00 0.00 0.00 3.02
451 452 1.455849 CCCTGGCAAACACCTCTCA 59.544 57.895 0.00 0.00 0.00 3.27
452 453 1.973812 GCCCTGGCAAACACCTCTC 60.974 63.158 2.58 0.00 41.49 3.20
453 454 2.116125 GCCCTGGCAAACACCTCT 59.884 61.111 2.58 0.00 41.49 3.69
454 455 1.973812 GAGCCCTGGCAAACACCTC 60.974 63.158 11.38 0.00 44.88 3.85
455 456 2.011617 AAGAGCCCTGGCAAACACCT 62.012 55.000 11.38 0.00 44.88 4.00
456 457 1.115326 AAAGAGCCCTGGCAAACACC 61.115 55.000 11.38 0.00 44.88 4.16
457 458 0.032540 CAAAGAGCCCTGGCAAACAC 59.967 55.000 11.38 0.00 44.88 3.32
458 459 1.747325 GCAAAGAGCCCTGGCAAACA 61.747 55.000 11.38 0.00 44.88 2.83
459 460 1.005748 GCAAAGAGCCCTGGCAAAC 60.006 57.895 11.38 1.63 44.88 2.93
460 461 3.458653 GCAAAGAGCCCTGGCAAA 58.541 55.556 11.38 0.00 44.88 3.68
482 483 3.458163 TAAGCTCCTCGTGCCCGG 61.458 66.667 0.00 0.00 33.95 5.73
483 484 2.202756 GTAAGCTCCTCGTGCCCG 60.203 66.667 0.00 0.00 0.00 6.13
484 485 0.811616 CATGTAAGCTCCTCGTGCCC 60.812 60.000 0.00 0.00 0.00 5.36
485 486 0.811616 CCATGTAAGCTCCTCGTGCC 60.812 60.000 0.00 0.00 0.00 5.01
486 487 1.432270 GCCATGTAAGCTCCTCGTGC 61.432 60.000 0.00 0.00 0.00 5.34
487 488 1.148157 CGCCATGTAAGCTCCTCGTG 61.148 60.000 0.00 0.00 0.00 4.35
488 489 1.141881 CGCCATGTAAGCTCCTCGT 59.858 57.895 0.00 0.00 0.00 4.18
489 490 2.240500 GCGCCATGTAAGCTCCTCG 61.241 63.158 0.00 0.00 0.00 4.63
490 491 1.889573 GGCGCCATGTAAGCTCCTC 60.890 63.158 24.80 0.00 32.23 3.71
491 492 2.190578 GGCGCCATGTAAGCTCCT 59.809 61.111 24.80 0.00 32.23 3.69
492 493 3.272334 CGGCGCCATGTAAGCTCC 61.272 66.667 28.98 0.00 0.00 4.70
493 494 3.272334 CCGGCGCCATGTAAGCTC 61.272 66.667 28.98 0.00 0.00 4.09
496 497 3.272334 GAGCCGGCGCCATGTAAG 61.272 66.667 28.98 8.71 34.57 2.34
514 515 4.025401 CACCAACGGTCGCAAGCC 62.025 66.667 0.00 0.00 31.02 4.35
515 516 4.683334 GCACCAACGGTCGCAAGC 62.683 66.667 0.00 0.00 31.02 4.01
516 517 2.972505 AGCACCAACGGTCGCAAG 60.973 61.111 9.28 0.00 34.10 4.01
517 518 3.276091 CAGCACCAACGGTCGCAA 61.276 61.111 9.28 0.00 34.10 4.85
536 537 4.742201 CTCAGACCACACCCCGCG 62.742 72.222 0.00 0.00 0.00 6.46
537 538 2.185310 AATCTCAGACCACACCCCGC 62.185 60.000 0.00 0.00 0.00 6.13
538 539 0.324943 AAATCTCAGACCACACCCCG 59.675 55.000 0.00 0.00 0.00 5.73
539 540 1.630878 AGAAATCTCAGACCACACCCC 59.369 52.381 0.00 0.00 0.00 4.95
540 541 2.979240 GAGAAATCTCAGACCACACCC 58.021 52.381 5.56 0.00 42.42 4.61
551 552 8.604640 TGATAGCATTGAGAATGAGAAATCTC 57.395 34.615 3.43 3.43 41.46 2.75
1128 1133 7.652524 TGTATAGGCATGCCATTTTAGAAAA 57.347 32.000 37.18 10.02 38.92 2.29
1144 1149 4.094442 CGAAACTTGAACCCTTGTATAGGC 59.906 45.833 0.00 0.00 43.27 3.93
1253 1258 3.375610 TGCACTTGTTTGTACACGAATGT 59.624 39.130 0.00 0.00 43.30 2.71
1404 1409 2.434336 TGGATGACCCTCGAAACCATAG 59.566 50.000 0.00 0.00 35.38 2.23
1573 1653 6.181908 GGACTAGACCTATGTAGATTCGGAT 58.818 44.000 3.79 0.00 0.00 4.18
1745 1825 7.175073 ACGCAGTACTTTTTCTTTACTTCTC 57.825 36.000 0.00 0.00 41.94 2.87
1984 2064 5.801380 AGTCTGGTGTTCGTTATACCATTT 58.199 37.500 8.72 0.00 45.68 2.32
1985 2065 5.416271 AGTCTGGTGTTCGTTATACCATT 57.584 39.130 8.72 0.00 45.68 3.16
1986 2066 5.187186 AGAAGTCTGGTGTTCGTTATACCAT 59.813 40.000 8.72 0.00 45.68 3.55
1987 2067 4.525487 AGAAGTCTGGTGTTCGTTATACCA 59.475 41.667 8.17 8.17 44.80 3.25
1988 2068 5.069501 AGAAGTCTGGTGTTCGTTATACC 57.930 43.478 0.00 0.00 38.45 2.73
1989 2069 5.952033 AGAGAAGTCTGGTGTTCGTTATAC 58.048 41.667 0.00 0.00 0.00 1.47
1990 2070 6.656270 TGTAGAGAAGTCTGGTGTTCGTTATA 59.344 38.462 0.00 0.00 33.84 0.98
1991 2071 5.475909 TGTAGAGAAGTCTGGTGTTCGTTAT 59.524 40.000 0.00 0.00 33.84 1.89
1992 2072 4.823442 TGTAGAGAAGTCTGGTGTTCGTTA 59.177 41.667 0.00 0.00 33.84 3.18
1993 2073 3.635373 TGTAGAGAAGTCTGGTGTTCGTT 59.365 43.478 0.00 0.00 33.84 3.85
1994 2074 3.220110 TGTAGAGAAGTCTGGTGTTCGT 58.780 45.455 0.00 0.00 33.84 3.85
1995 2075 3.917329 TGTAGAGAAGTCTGGTGTTCG 57.083 47.619 0.00 0.00 33.84 3.95
1996 2076 6.326375 CAGTATGTAGAGAAGTCTGGTGTTC 58.674 44.000 0.00 0.00 33.84 3.18
1997 2077 5.186021 CCAGTATGTAGAGAAGTCTGGTGTT 59.814 44.000 0.00 0.00 37.00 3.32
1998 2078 4.707448 CCAGTATGTAGAGAAGTCTGGTGT 59.293 45.833 0.00 0.00 37.00 4.16
1999 2079 4.440802 GCCAGTATGTAGAGAAGTCTGGTG 60.441 50.000 9.50 0.00 41.77 4.17
2000 2080 3.702045 GCCAGTATGTAGAGAAGTCTGGT 59.298 47.826 9.50 0.00 41.77 4.00
2001 2081 3.701542 TGCCAGTATGTAGAGAAGTCTGG 59.298 47.826 0.00 0.00 42.37 3.86
2002 2082 4.991153 TGCCAGTATGTAGAGAAGTCTG 57.009 45.455 0.00 0.00 33.84 3.51
2003 2083 5.221145 CGAATGCCAGTATGTAGAGAAGTCT 60.221 44.000 0.00 0.00 36.75 3.24
2004 2084 4.979197 CGAATGCCAGTATGTAGAGAAGTC 59.021 45.833 0.00 0.00 0.00 3.01
2105 2185 8.744652 TCCTGTTTCAGAGATACAAAACAAAAA 58.255 29.630 0.00 0.00 40.10 1.94
2259 2572 0.376152 CTACCTATGTCGCGTGTCGT 59.624 55.000 5.77 2.35 39.67 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.