Multiple sequence alignment - TraesCS4A01G240900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G240900 chr4A 100.000 8264 0 0 1 8264 550488426 550480163 0.000000e+00 15261.0
1 TraesCS4A01G240900 chr4A 92.965 1791 101 13 2510 4294 96024360 96026131 0.000000e+00 2586.0
2 TraesCS4A01G240900 chr4A 79.544 1359 246 21 5919 7258 43233063 43231718 0.000000e+00 941.0
3 TraesCS4A01G240900 chr4A 77.967 1348 261 31 5907 7234 593356274 593354943 0.000000e+00 811.0
4 TraesCS4A01G240900 chr4A 85.161 465 66 2 5167 5631 43233726 43233265 2.700000e-129 473.0
5 TraesCS4A01G240900 chr4A 83.186 452 73 2 5167 5618 593356829 593356381 2.150000e-110 411.0
6 TraesCS4A01G240900 chr4A 83.228 316 47 6 1146 1459 43235728 43235417 1.360000e-72 285.0
7 TraesCS4A01G240900 chr4D 93.687 1885 81 20 5675 7530 47535970 47534095 0.000000e+00 2787.0
8 TraesCS4A01G240900 chr4D 91.121 1329 45 26 525 1810 47539584 47538286 0.000000e+00 1733.0
9 TraesCS4A01G240900 chr4D 79.480 1345 240 25 5904 7227 420942836 420944165 0.000000e+00 922.0
10 TraesCS4A01G240900 chr4D 86.445 841 63 20 4295 5112 47537354 47536542 0.000000e+00 874.0
11 TraesCS4A01G240900 chr4D 78.423 1344 257 27 5906 7231 10250854 10252182 0.000000e+00 845.0
12 TraesCS4A01G240900 chr4D 94.600 537 16 7 5153 5677 47536538 47536003 0.000000e+00 819.0
13 TraesCS4A01G240900 chr4D 89.789 568 25 11 7726 8264 47534038 47533475 0.000000e+00 697.0
14 TraesCS4A01G240900 chr4D 84.516 465 69 2 5167 5631 420942187 420942648 2.720000e-124 457.0
15 TraesCS4A01G240900 chr4D 83.850 452 68 4 5168 5618 10250300 10250747 7.670000e-115 425.0
16 TraesCS4A01G240900 chr4D 81.373 102 14 3 6521 6619 128166900 128166801 2.470000e-10 78.7
17 TraesCS4A01G240900 chr4D 88.710 62 3 4 1889 1946 306302766 306302705 1.150000e-08 73.1
18 TraesCS4A01G240900 chr6A 93.470 1807 96 12 2504 4291 602925959 602927762 0.000000e+00 2663.0
19 TraesCS4A01G240900 chr6A 91.958 1803 108 18 2508 4293 566438127 566439909 0.000000e+00 2492.0
20 TraesCS4A01G240900 chr2A 93.677 1787 99 11 2510 4291 93983665 93981888 0.000000e+00 2662.0
21 TraesCS4A01G240900 chr2A 94.335 1730 91 5 2569 4291 729210515 729208786 0.000000e+00 2645.0
22 TraesCS4A01G240900 chr2A 91.853 1792 129 7 2510 4295 707567089 707565309 0.000000e+00 2484.0
23 TraesCS4A01G240900 chr2A 91.391 1812 120 24 2510 4295 10222755 10220954 0.000000e+00 2449.0
24 TraesCS4A01G240900 chr7A 92.973 1793 105 11 2510 4295 689696521 689698299 0.000000e+00 2593.0
25 TraesCS4A01G240900 chr7A 92.663 1799 114 12 2508 4294 62469978 62471770 0.000000e+00 2575.0
26 TraesCS4A01G240900 chr7A 77.863 131 25 3 107 236 246250066 246250193 2.470000e-10 78.7
27 TraesCS4A01G240900 chr4B 92.821 1755 84 20 5904 7647 69378921 69380644 0.000000e+00 2505.0
28 TraesCS4A01G240900 chr4B 89.129 1895 100 32 1 1857 69374781 69376607 0.000000e+00 2261.0
29 TraesCS4A01G240900 chr4B 79.645 1351 241 24 5904 7234 518098127 518099463 0.000000e+00 941.0
30 TraesCS4A01G240900 chr4B 90.423 710 25 25 5153 5828 69378029 69378729 0.000000e+00 894.0
31 TraesCS4A01G240900 chr4B 78.951 1335 247 28 5907 7222 19736655 19737974 0.000000e+00 878.0
32 TraesCS4A01G240900 chr4B 86.435 833 73 15 4291 5109 69377216 69378022 0.000000e+00 876.0
33 TraesCS4A01G240900 chr4B 90.071 564 24 12 7726 8264 69380632 69381188 0.000000e+00 702.0
34 TraesCS4A01G240900 chr4B 84.861 469 67 3 5163 5631 518097472 518097936 3.490000e-128 470.0
35 TraesCS4A01G240900 chr4B 84.141 454 69 2 5165 5618 19736098 19736548 3.540000e-118 436.0
36 TraesCS4A01G240900 chr4B 81.788 302 51 4 1146 1445 518095387 518095686 4.950000e-62 250.0
37 TraesCS4A01G240900 chr4B 91.195 159 10 2 1938 2094 69376609 69376765 6.500000e-51 213.0
38 TraesCS4A01G240900 chr4B 93.750 112 6 1 2096 2206 69376794 69376905 5.130000e-37 167.0
39 TraesCS4A01G240900 chr4B 81.188 101 14 3 6521 6618 192058288 192058190 8.890000e-10 76.8
40 TraesCS4A01G240900 chr3A 92.029 1794 116 14 2510 4291 707859051 707857273 0.000000e+00 2495.0
41 TraesCS4A01G240900 chr3A 92.453 53 4 0 1889 1941 94088708 94088656 8.890000e-10 76.8
42 TraesCS4A01G240900 chr1A 91.732 1790 123 12 2512 4291 497588720 497590494 0.000000e+00 2462.0
43 TraesCS4A01G240900 chr1A 94.231 52 3 0 1887 1938 511001162 511001213 6.880000e-11 80.5
44 TraesCS4A01G240900 chr6B 74.089 247 62 2 5386 5631 506546489 506546734 5.280000e-17 100.0
45 TraesCS4A01G240900 chr6B 94.118 51 3 0 1893 1943 12650906 12650856 2.470000e-10 78.7
46 TraesCS4A01G240900 chr6D 90.769 65 6 0 1889 1953 49451027 49451091 4.110000e-13 87.9
47 TraesCS4A01G240900 chr7B 94.340 53 3 0 1889 1941 409376886 409376834 1.910000e-11 82.4
48 TraesCS4A01G240900 chr7B 92.857 56 3 1 1889 1943 17869182 17869237 6.880000e-11 80.5
49 TraesCS4A01G240900 chr5D 94.118 51 3 0 1889 1939 351610112 351610162 2.470000e-10 78.7
50 TraesCS4A01G240900 chr5A 94.118 51 3 0 1889 1939 670089690 670089640 2.470000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G240900 chr4A 550480163 550488426 8263 True 15261.000000 15261 100.000000 1 8264 1 chr4A.!!$R1 8263
1 TraesCS4A01G240900 chr4A 96024360 96026131 1771 False 2586.000000 2586 92.965000 2510 4294 1 chr4A.!!$F1 1784
2 TraesCS4A01G240900 chr4A 593354943 593356829 1886 True 611.000000 811 80.576500 5167 7234 2 chr4A.!!$R3 2067
3 TraesCS4A01G240900 chr4A 43231718 43235728 4010 True 566.333333 941 82.644333 1146 7258 3 chr4A.!!$R2 6112
4 TraesCS4A01G240900 chr4D 47533475 47539584 6109 True 1382.000000 2787 91.128400 525 8264 5 chr4D.!!$R3 7739
5 TraesCS4A01G240900 chr4D 420942187 420944165 1978 False 689.500000 922 81.998000 5167 7227 2 chr4D.!!$F2 2060
6 TraesCS4A01G240900 chr4D 10250300 10252182 1882 False 635.000000 845 81.136500 5168 7231 2 chr4D.!!$F1 2063
7 TraesCS4A01G240900 chr6A 602925959 602927762 1803 False 2663.000000 2663 93.470000 2504 4291 1 chr6A.!!$F2 1787
8 TraesCS4A01G240900 chr6A 566438127 566439909 1782 False 2492.000000 2492 91.958000 2508 4293 1 chr6A.!!$F1 1785
9 TraesCS4A01G240900 chr2A 93981888 93983665 1777 True 2662.000000 2662 93.677000 2510 4291 1 chr2A.!!$R2 1781
10 TraesCS4A01G240900 chr2A 729208786 729210515 1729 True 2645.000000 2645 94.335000 2569 4291 1 chr2A.!!$R4 1722
11 TraesCS4A01G240900 chr2A 707565309 707567089 1780 True 2484.000000 2484 91.853000 2510 4295 1 chr2A.!!$R3 1785
12 TraesCS4A01G240900 chr2A 10220954 10222755 1801 True 2449.000000 2449 91.391000 2510 4295 1 chr2A.!!$R1 1785
13 TraesCS4A01G240900 chr7A 689696521 689698299 1778 False 2593.000000 2593 92.973000 2510 4295 1 chr7A.!!$F3 1785
14 TraesCS4A01G240900 chr7A 62469978 62471770 1792 False 2575.000000 2575 92.663000 2508 4294 1 chr7A.!!$F1 1786
15 TraesCS4A01G240900 chr4B 69374781 69381188 6407 False 1088.285714 2505 90.546286 1 8264 7 chr4B.!!$F2 8263
16 TraesCS4A01G240900 chr4B 19736098 19737974 1876 False 657.000000 878 81.546000 5165 7222 2 chr4B.!!$F1 2057
17 TraesCS4A01G240900 chr4B 518095387 518099463 4076 False 553.666667 941 82.098000 1146 7234 3 chr4B.!!$F3 6088
18 TraesCS4A01G240900 chr3A 707857273 707859051 1778 True 2495.000000 2495 92.029000 2510 4291 1 chr3A.!!$R2 1781
19 TraesCS4A01G240900 chr1A 497588720 497590494 1774 False 2462.000000 2462 91.732000 2512 4291 1 chr1A.!!$F1 1779

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
308 310 0.621082 AGAGCTAAAAGGCCCTCCAC 59.379 55.000 0.00 0.00 33.74 4.02 F
632 637 0.813184 CGGATATGCCCATGGAATGC 59.187 55.000 15.22 9.12 44.97 3.56 F
633 638 1.188863 GGATATGCCCATGGAATGCC 58.811 55.000 15.22 8.96 44.97 4.40 F
1636 1665 1.205417 GTTGGGTTAGGGTCGATCGAA 59.795 52.381 21.31 0.22 0.00 3.71 F
2727 4337 0.035176 AAAAACTACCGCGGGCTACA 59.965 50.000 31.76 7.80 0.00 2.74 F
2794 4415 2.092882 GGCTGTAGAACCGCGTGTC 61.093 63.158 4.92 1.05 0.00 3.67 F
4391 6114 0.031994 CGCCTTTTTGGTTGTGGGAG 59.968 55.000 0.00 0.00 38.35 4.30 F
4392 6115 0.392706 GCCTTTTTGGTTGTGGGAGG 59.607 55.000 0.00 0.00 38.35 4.30 F
5636 7406 0.463474 GCCTCGACGGGTACTCTACT 60.463 60.000 0.00 0.00 0.00 2.57 F
6494 8444 0.179043 CAGCAGCAGAGCCTCATCAT 60.179 55.000 0.00 0.00 34.23 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1636 1665 0.040646 CATGATATGCCTGGGCCCAT 59.959 55.000 28.82 13.82 41.09 4.00 R
2447 3291 0.035439 CGGCAGTTTGTCCTATGGGT 60.035 55.000 0.00 0.00 0.00 4.51 R
2501 3345 2.039613 GCTGGAGATGCCCTTATAGCTT 59.960 50.000 0.00 0.00 34.97 3.74 R
3093 4747 1.379977 TCCTCGTCGAGCCCAAGAT 60.380 57.895 17.02 0.00 0.00 2.40 R
3691 5402 0.171231 CCATCTGCACGAGAACGAGA 59.829 55.000 0.00 0.00 42.66 4.04 R
4457 6180 0.250424 AACCAAAAGGTCGGGTACGG 60.250 55.000 0.00 0.00 41.39 4.02 R
5697 7509 0.026156 GCACGCAAGCAACCAAAAAC 59.974 50.000 0.00 0.00 45.62 2.43 R
5843 7658 0.609662 GCAAATCCATGCAAGGTGGT 59.390 50.000 8.03 0.00 45.70 4.16 R
7080 9045 0.036732 TGAACCCGATGAGCTGCTTT 59.963 50.000 2.53 0.00 0.00 3.51 R
7908 9911 0.037326 TTGAGCCAGGTTCGTGCTAG 60.037 55.000 0.00 0.00 34.99 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.215647 CGTGAGAAACCCTCCTCCG 59.784 63.158 0.00 0.00 41.25 4.63
42 43 2.706190 CCTCCTCCGAACAAGGGATAAT 59.294 50.000 0.00 0.00 34.46 1.28
43 44 3.495100 CCTCCTCCGAACAAGGGATAATG 60.495 52.174 0.00 0.00 34.46 1.90
48 49 3.136443 TCCGAACAAGGGATAATGCATCT 59.864 43.478 0.00 0.00 33.78 2.90
69 71 6.975196 TCTTGATTTGATTCCAAAACTCCA 57.025 33.333 0.00 0.00 44.49 3.86
70 72 6.748132 TCTTGATTTGATTCCAAAACTCCAC 58.252 36.000 0.00 0.00 44.49 4.02
77 79 5.630121 TGATTCCAAAACTCCACAGTGTAT 58.370 37.500 0.00 0.00 31.06 2.29
81 83 4.003648 CCAAAACTCCACAGTGTATCTCC 58.996 47.826 0.00 0.00 31.06 3.71
83 85 1.475403 ACTCCACAGTGTATCTCCCG 58.525 55.000 0.00 0.00 0.00 5.14
85 87 2.100197 CTCCACAGTGTATCTCCCGAA 58.900 52.381 0.00 0.00 0.00 4.30
86 88 2.496070 CTCCACAGTGTATCTCCCGAAA 59.504 50.000 0.00 0.00 0.00 3.46
87 89 2.232941 TCCACAGTGTATCTCCCGAAAC 59.767 50.000 0.00 0.00 0.00 2.78
88 90 2.233922 CCACAGTGTATCTCCCGAAACT 59.766 50.000 0.00 0.00 0.00 2.66
89 91 3.306780 CCACAGTGTATCTCCCGAAACTT 60.307 47.826 0.00 0.00 0.00 2.66
90 92 3.927142 CACAGTGTATCTCCCGAAACTTC 59.073 47.826 0.00 0.00 0.00 3.01
91 93 3.833070 ACAGTGTATCTCCCGAAACTTCT 59.167 43.478 0.00 0.00 0.00 2.85
92 94 4.283722 ACAGTGTATCTCCCGAAACTTCTT 59.716 41.667 0.00 0.00 0.00 2.52
93 95 5.479375 ACAGTGTATCTCCCGAAACTTCTTA 59.521 40.000 0.00 0.00 0.00 2.10
94 96 6.037098 CAGTGTATCTCCCGAAACTTCTTAG 58.963 44.000 0.00 0.00 0.00 2.18
95 97 5.715753 AGTGTATCTCCCGAAACTTCTTAGT 59.284 40.000 0.00 0.00 35.68 2.24
96 98 5.805994 GTGTATCTCCCGAAACTTCTTAGTG 59.194 44.000 0.00 0.00 34.01 2.74
97 99 3.955650 TCTCCCGAAACTTCTTAGTGG 57.044 47.619 0.00 0.00 34.01 4.00
101 103 3.644738 TCCCGAAACTTCTTAGTGGTTCT 59.355 43.478 0.00 0.00 34.01 3.01
104 106 3.186613 CGAAACTTCTTAGTGGTTCTGGC 59.813 47.826 4.91 0.00 34.01 4.85
110 112 1.561542 CTTAGTGGTTCTGGCATCCCT 59.438 52.381 0.00 0.00 0.00 4.20
112 114 1.136329 AGTGGTTCTGGCATCCCTGT 61.136 55.000 0.00 0.00 0.00 4.00
139 141 5.340439 AACACCTTAGTCACTATACCTGC 57.660 43.478 0.00 0.00 0.00 4.85
140 142 4.611367 ACACCTTAGTCACTATACCTGCT 58.389 43.478 0.00 0.00 0.00 4.24
142 144 5.828859 ACACCTTAGTCACTATACCTGCTAG 59.171 44.000 0.00 0.00 0.00 3.42
144 146 6.546403 CACCTTAGTCACTATACCTGCTAGAA 59.454 42.308 0.00 0.00 0.00 2.10
157 159 4.965532 ACCTGCTAGAAGATGTTGGATACT 59.034 41.667 0.00 0.00 37.61 2.12
167 169 9.078990 AGAAGATGTTGGATACTGTAATATCGA 57.921 33.333 0.00 0.00 33.08 3.59
171 173 7.576861 TGTTGGATACTGTAATATCGAGTGA 57.423 36.000 0.00 0.00 33.08 3.41
220 222 4.278975 AGGGTCAAATCTCAGTCTTGAC 57.721 45.455 11.18 11.18 45.30 3.18
221 223 3.648067 AGGGTCAAATCTCAGTCTTGACA 59.352 43.478 17.77 0.00 46.98 3.58
222 224 4.288105 AGGGTCAAATCTCAGTCTTGACAT 59.712 41.667 17.77 7.76 46.98 3.06
223 225 5.485353 AGGGTCAAATCTCAGTCTTGACATA 59.515 40.000 17.77 0.00 46.98 2.29
244 246 9.472361 GACATATCGTGTACCACATAATAGTTT 57.528 33.333 0.00 0.00 42.36 2.66
246 248 9.471084 CATATCGTGTACCACATAATAGTTTCA 57.529 33.333 0.00 0.00 33.40 2.69
255 257 7.867921 ACCACATAATAGTTTCATTCCACCTA 58.132 34.615 0.00 0.00 0.00 3.08
258 260 7.709182 CACATAATAGTTTCATTCCACCTACGA 59.291 37.037 0.00 0.00 0.00 3.43
282 284 4.654015 GAGGTAGCTATCTAATTCGAGCG 58.346 47.826 6.48 0.00 39.96 5.03
289 291 1.758936 TCTAATTCGAGCGGGAGTCA 58.241 50.000 0.00 0.00 0.00 3.41
308 310 0.621082 AGAGCTAAAAGGCCCTCCAC 59.379 55.000 0.00 0.00 33.74 4.02
315 317 2.113243 AAAGGCCCTCCACTCACGTC 62.113 60.000 0.00 0.00 33.74 4.34
341 345 4.100035 TCAAGTTTCTTCTCTGTCTGCTGA 59.900 41.667 0.00 0.00 0.00 4.26
373 377 2.112998 CAAGCCATGTCATCCCCATTT 58.887 47.619 0.00 0.00 0.00 2.32
379 383 0.988063 TGTCATCCCCATTTCGGACA 59.012 50.000 0.00 0.00 36.56 4.02
422 426 4.101448 GGTGAGGACGCCATGGCT 62.101 66.667 33.07 20.54 45.14 4.75
445 449 8.021396 GGCTAGTTTACACCTACAATCTTTTTG 58.979 37.037 0.00 0.00 0.00 2.44
448 452 8.974060 AGTTTACACCTACAATCTTTTTGAGA 57.026 30.769 0.00 0.00 39.13 3.27
476 480 8.644318 ACTTATAATTAGTTGTTGCGACTAGG 57.356 34.615 5.50 0.00 32.67 3.02
495 499 5.885912 ACTAGGAATTGCGTGTTTGGATATT 59.114 36.000 0.00 0.00 0.00 1.28
594 599 7.013846 ACAACTAGCTAGCCTTACTTATCTCAG 59.986 40.741 20.91 0.00 0.00 3.35
626 631 1.264020 CACGAAACGGATATGCCCATG 59.736 52.381 0.00 0.00 0.00 3.66
627 632 0.874390 CGAAACGGATATGCCCATGG 59.126 55.000 4.14 4.14 0.00 3.66
628 633 1.542328 CGAAACGGATATGCCCATGGA 60.542 52.381 15.22 0.00 0.00 3.41
632 637 0.813184 CGGATATGCCCATGGAATGC 59.187 55.000 15.22 9.12 44.97 3.56
633 638 1.188863 GGATATGCCCATGGAATGCC 58.811 55.000 15.22 8.96 44.97 4.40
634 639 1.188863 GATATGCCCATGGAATGCCC 58.811 55.000 15.22 0.00 44.97 5.36
675 689 3.466836 TCAATTCATGATCTACGCACCC 58.533 45.455 0.00 0.00 31.50 4.61
683 701 6.061441 TCATGATCTACGCACCCAATTAATT 58.939 36.000 0.00 0.00 0.00 1.40
757 775 6.747280 GTGCAACATCACATATTCCACTTTAC 59.253 38.462 0.00 0.00 36.97 2.01
759 777 7.040132 TGCAACATCACATATTCCACTTTACAA 60.040 33.333 0.00 0.00 0.00 2.41
800 818 3.788227 TGTTCTTGCTGATGGGTAACT 57.212 42.857 0.00 0.00 0.00 2.24
801 819 4.901197 TGTTCTTGCTGATGGGTAACTA 57.099 40.909 0.00 0.00 0.00 2.24
802 820 4.832248 TGTTCTTGCTGATGGGTAACTAG 58.168 43.478 0.00 0.00 0.00 2.57
804 822 2.837591 TCTTGCTGATGGGTAACTAGCA 59.162 45.455 0.00 0.00 43.07 3.49
806 824 2.187958 TGCTGATGGGTAACTAGCACT 58.812 47.619 0.00 0.00 39.13 4.40
807 825 2.168521 TGCTGATGGGTAACTAGCACTC 59.831 50.000 0.00 0.00 39.13 3.51
837 855 7.117379 CAGCGTATCATATCATAGCATAATGGG 59.883 40.741 0.00 0.00 0.00 4.00
853 871 6.316390 GCATAATGGGATGGCAGTAGTATAAC 59.684 42.308 0.00 0.00 0.00 1.89
910 928 4.528039 CCCGCTCCCATTGGCCAT 62.528 66.667 6.09 0.00 0.00 4.40
1043 1064 1.369091 GCCGGCATGGTGTTACAGAG 61.369 60.000 24.80 0.00 41.21 3.35
1085 1106 4.643387 GTCGTTGCTGCTGGGGGT 62.643 66.667 0.00 0.00 0.00 4.95
1224 1245 3.112709 GTGGCGCTTCTGACGACC 61.113 66.667 7.64 0.00 37.92 4.79
1466 1489 1.405461 CGTACGCACGCATAAGCTAT 58.595 50.000 0.52 0.00 42.05 2.97
1545 1573 4.437820 CGGTTTCTTTTCGCTTTTTCTCAG 59.562 41.667 0.00 0.00 0.00 3.35
1636 1665 1.205417 GTTGGGTTAGGGTCGATCGAA 59.795 52.381 21.31 0.22 0.00 3.71
1649 1678 2.703675 GATCGAATGGGCCCAGGCAT 62.704 60.000 31.97 18.64 44.11 4.40
1718 2065 4.197498 GCATCATGCACCGGCCAC 62.197 66.667 4.20 0.00 44.26 5.01
1732 2079 1.269723 CGGCCACTTTCTTTCCTTTCC 59.730 52.381 2.24 0.00 0.00 3.13
1807 2179 1.679032 GCTCGTGGGCTAAGGATTTGT 60.679 52.381 0.00 0.00 0.00 2.83
1808 2180 2.711542 CTCGTGGGCTAAGGATTTGTT 58.288 47.619 0.00 0.00 0.00 2.83
1809 2181 3.869065 CTCGTGGGCTAAGGATTTGTTA 58.131 45.455 0.00 0.00 0.00 2.41
1810 2182 3.602483 TCGTGGGCTAAGGATTTGTTAC 58.398 45.455 0.00 0.00 0.00 2.50
1811 2183 3.262405 TCGTGGGCTAAGGATTTGTTACT 59.738 43.478 0.00 0.00 0.00 2.24
1832 2204 8.722394 GTTACTCTAGATGCTAGCTTTGTTTTT 58.278 33.333 17.23 0.00 0.00 1.94
1935 2307 9.780186 AAGATAAATATTTAGGAACGGAAGGAG 57.220 33.333 13.15 0.00 0.00 3.69
1936 2308 8.935741 AGATAAATATTTAGGAACGGAAGGAGT 58.064 33.333 13.15 0.00 0.00 3.85
1952 2324 9.233649 ACGGAAGGAGTATATATTACTCTCTTG 57.766 37.037 19.09 13.81 42.54 3.02
1964 2336 6.566197 ATTACTCTCTTGTGCCTCAAAAAG 57.434 37.500 0.00 0.00 35.48 2.27
1965 2337 3.891049 ACTCTCTTGTGCCTCAAAAAGT 58.109 40.909 0.00 0.00 35.48 2.66
1967 2339 5.625150 ACTCTCTTGTGCCTCAAAAAGTAT 58.375 37.500 0.00 0.00 35.48 2.12
2026 2400 5.762179 TGATTCTGTAGGGCTATTATGGG 57.238 43.478 0.00 0.00 0.00 4.00
2053 2440 6.506500 TTTACTCGTACACTCTAGGAAAGG 57.493 41.667 0.00 0.00 0.00 3.11
2162 2910 6.616017 CAAGAAGAAGAAAAGGCATACTTCC 58.384 40.000 0.00 0.00 38.85 3.46
2231 2979 9.933723 ATTATTTTTCTGCAAAAAGAGCATACT 57.066 25.926 2.98 0.00 43.22 2.12
2284 3068 7.440856 GGATCTAATCTGTCAAAGTTCTCCATC 59.559 40.741 0.00 0.00 0.00 3.51
2288 3080 4.635223 TCTGTCAAAGTTCTCCATCTGTG 58.365 43.478 0.00 0.00 0.00 3.66
2291 3083 3.817647 GTCAAAGTTCTCCATCTGTGCTT 59.182 43.478 0.00 0.00 0.00 3.91
2295 3087 4.199432 AGTTCTCCATCTGTGCTTACTG 57.801 45.455 0.00 0.00 0.00 2.74
2302 3094 6.595326 TCTCCATCTGTGCTTACTGTATTTTG 59.405 38.462 0.00 0.00 0.00 2.44
2307 3099 6.765403 TCTGTGCTTACTGTATTTTGGTAGT 58.235 36.000 0.00 0.00 0.00 2.73
2309 3101 5.636121 TGTGCTTACTGTATTTTGGTAGTCG 59.364 40.000 0.00 0.00 0.00 4.18
2310 3102 5.865552 GTGCTTACTGTATTTTGGTAGTCGA 59.134 40.000 0.00 0.00 0.00 4.20
2322 3114 2.640826 TGGTAGTCGAATTTCCCTTGGT 59.359 45.455 0.00 0.00 0.00 3.67
2324 3116 2.094762 AGTCGAATTTCCCTTGGTCG 57.905 50.000 0.00 0.00 0.00 4.79
2328 3120 1.609580 CGAATTTCCCTTGGTCGACCA 60.610 52.381 33.23 33.23 45.94 4.02
2345 3137 6.064846 TCGACCACGACTAGGATTTAATAC 57.935 41.667 0.00 0.00 43.81 1.89
2346 3138 5.824624 TCGACCACGACTAGGATTTAATACT 59.175 40.000 0.00 0.00 43.81 2.12
2347 3139 6.017605 TCGACCACGACTAGGATTTAATACTC 60.018 42.308 0.00 0.00 43.81 2.59
2348 3140 6.238566 CGACCACGACTAGGATTTAATACTCA 60.239 42.308 0.00 0.00 42.66 3.41
2349 3141 7.521748 CGACCACGACTAGGATTTAATACTCAT 60.522 40.741 0.00 0.00 42.66 2.90
2350 3142 7.659186 ACCACGACTAGGATTTAATACTCATC 58.341 38.462 0.00 0.00 0.00 2.92
2353 3145 9.011095 CACGACTAGGATTTAATACTCATCCTA 57.989 37.037 10.91 10.91 44.30 2.94
2354 3146 9.756571 ACGACTAGGATTTAATACTCATCCTAT 57.243 33.333 11.56 4.88 44.96 2.57
2391 3201 4.655027 CCGGAGCGTCTTAAAATTAAACC 58.345 43.478 0.00 0.00 0.00 3.27
2425 3269 7.891561 ACGTCCAAATTATCAAATTCCTTTCA 58.108 30.769 0.00 0.00 34.12 2.69
2439 3283 9.189156 CAAATTCCTTTCATGTTATTCTCCCTA 57.811 33.333 0.00 0.00 0.00 3.53
2440 3284 8.986929 AATTCCTTTCATGTTATTCTCCCTAG 57.013 34.615 0.00 0.00 0.00 3.02
2444 3288 8.047310 TCCTTTCATGTTATTCTCCCTAGAAAC 58.953 37.037 0.00 0.00 44.75 2.78
2445 3289 7.829211 CCTTTCATGTTATTCTCCCTAGAAACA 59.171 37.037 0.00 0.00 44.75 2.83
2446 3290 9.231297 CTTTCATGTTATTCTCCCTAGAAACAA 57.769 33.333 0.00 0.00 44.75 2.83
2447 3291 9.581289 TTTCATGTTATTCTCCCTAGAAACAAA 57.419 29.630 0.00 0.00 44.75 2.83
2448 3292 8.561738 TCATGTTATTCTCCCTAGAAACAAAC 57.438 34.615 0.00 0.00 44.75 2.93
2476 3320 2.289547 GACAAACTGCCGTGTGTACATT 59.710 45.455 3.82 0.00 41.64 2.71
2599 3444 2.046892 GCACTGAGGGCGTGATGT 60.047 61.111 0.00 0.00 34.35 3.06
2727 4337 0.035176 AAAAACTACCGCGGGCTACA 59.965 50.000 31.76 7.80 0.00 2.74
2794 4415 2.092882 GGCTGTAGAACCGCGTGTC 61.093 63.158 4.92 1.05 0.00 3.67
2798 4419 2.142239 GTAGAACCGCGTGTCGTCG 61.142 63.158 4.92 0.00 36.19 5.12
2854 4490 2.679716 GTCCCTGCTGCATCCCTT 59.320 61.111 1.31 0.00 0.00 3.95
2858 4494 2.515523 CTGCTGCATCCCTTCCCG 60.516 66.667 1.31 0.00 0.00 5.14
3294 4955 4.332543 TCCAGGAGCTTCCCCGGT 62.333 66.667 0.00 0.00 37.19 5.28
3526 5237 3.698820 GACGTACCGTGGCCCCTT 61.699 66.667 0.00 0.00 41.37 3.95
3637 5348 3.785859 GCTGATCCTCCACGCCCA 61.786 66.667 0.00 0.00 0.00 5.36
3704 5415 4.044024 CGAGTCTCGTTCTCGTGC 57.956 61.111 14.27 0.00 46.22 5.34
3796 5509 1.153329 GGAGACGGCGAGAGAGAGA 60.153 63.158 16.62 0.00 0.00 3.10
4019 5734 1.135315 GCAGCTTTGGCATTGATTCGA 60.135 47.619 0.00 0.00 41.70 3.71
4281 6004 1.568612 CTTTCTGAAAGCGCGGCTGA 61.569 55.000 16.43 2.10 39.62 4.26
4314 6037 4.017877 GCAGCACGTGAGCACACC 62.018 66.667 22.23 0.00 43.34 4.16
4391 6114 0.031994 CGCCTTTTTGGTTGTGGGAG 59.968 55.000 0.00 0.00 38.35 4.30
4392 6115 0.392706 GCCTTTTTGGTTGTGGGAGG 59.607 55.000 0.00 0.00 38.35 4.30
4393 6116 1.047801 CCTTTTTGGTTGTGGGAGGG 58.952 55.000 0.00 0.00 0.00 4.30
4394 6117 1.412361 CCTTTTTGGTTGTGGGAGGGA 60.412 52.381 0.00 0.00 0.00 4.20
4439 6162 2.472861 CACACACAGATCTGACACGAAC 59.527 50.000 29.27 0.00 0.00 3.95
4465 6188 2.266689 CCTTTCCCACCGTACCCG 59.733 66.667 0.00 0.00 0.00 5.28
4510 6233 1.070134 TGGGTATGGACTATTGAGCGC 59.930 52.381 0.00 0.00 0.00 5.92
4528 6252 2.563798 CGCCCACAATGCCACAAGT 61.564 57.895 0.00 0.00 0.00 3.16
4537 6261 0.892755 ATGCCACAAGTTCATGCCTG 59.107 50.000 0.00 0.00 0.00 4.85
4586 6313 1.002201 CAGGAGCTAGCTGGATCCATG 59.998 57.143 32.46 23.11 43.51 3.66
4595 6322 1.029681 CTGGATCCATGTGCATGTGG 58.970 55.000 16.63 12.71 37.11 4.17
4631 6358 8.515414 GGCATGATTAGTTAAAGATGGATTACC 58.485 37.037 0.00 0.00 0.00 2.85
4640 6367 0.736325 GATGGATTACCGCCGGATCG 60.736 60.000 11.71 0.00 39.42 3.69
4663 6390 6.317088 CGAGTATGTCGTTAACTCCAAGTTA 58.683 40.000 3.71 0.00 44.20 2.24
4718 6445 6.220930 TGATCACTAATTGTTAGGCCGTATC 58.779 40.000 0.00 0.00 37.57 2.24
4732 6459 3.234386 GCCGTATCAAGTCTGCAAAAAC 58.766 45.455 0.00 0.00 0.00 2.43
4733 6460 3.304391 GCCGTATCAAGTCTGCAAAAACA 60.304 43.478 0.00 0.00 0.00 2.83
4734 6461 4.466828 CCGTATCAAGTCTGCAAAAACAG 58.533 43.478 0.00 0.00 39.12 3.16
4735 6462 3.908382 CGTATCAAGTCTGCAAAAACAGC 59.092 43.478 0.00 0.00 37.59 4.40
4736 6463 4.319766 CGTATCAAGTCTGCAAAAACAGCT 60.320 41.667 0.00 0.00 37.59 4.24
4737 6464 5.107104 CGTATCAAGTCTGCAAAAACAGCTA 60.107 40.000 0.00 0.00 37.59 3.32
4739 6466 5.772825 TCAAGTCTGCAAAAACAGCTAAT 57.227 34.783 0.00 0.00 37.59 1.73
4740 6467 5.762045 TCAAGTCTGCAAAAACAGCTAATC 58.238 37.500 0.00 0.00 37.59 1.75
4741 6468 4.410492 AGTCTGCAAAAACAGCTAATCG 57.590 40.909 0.00 0.00 37.59 3.34
4742 6469 3.815401 AGTCTGCAAAAACAGCTAATCGT 59.185 39.130 0.00 0.00 37.59 3.73
4743 6470 4.275936 AGTCTGCAAAAACAGCTAATCGTT 59.724 37.500 0.00 0.00 37.59 3.85
4788 6519 5.164233 CCACTTGCTCAGTCATATATACCG 58.836 45.833 0.00 0.00 30.92 4.02
4812 6543 4.863491 CAGTTCATGCAAGTGCTTAAGTT 58.137 39.130 4.02 0.00 42.66 2.66
4818 6549 5.530915 TCATGCAAGTGCTTAAGTTGTACTT 59.469 36.000 4.02 7.38 40.76 2.24
4822 6553 5.008712 GCAAGTGCTTAAGTTGTACTTCCTT 59.991 40.000 4.02 0.00 40.76 3.36
4824 6555 4.989168 AGTGCTTAAGTTGTACTTCCTTCG 59.011 41.667 4.02 0.00 39.51 3.79
4827 6558 5.464389 TGCTTAAGTTGTACTTCCTTCGTTC 59.536 40.000 4.02 0.00 39.51 3.95
4833 6564 4.261578 TGTACTTCCTTCGTTCGGAATT 57.738 40.909 0.00 2.21 39.64 2.17
4834 6565 5.389859 TGTACTTCCTTCGTTCGGAATTA 57.610 39.130 0.00 1.45 39.64 1.40
4869 6600 9.058174 TGTTCTAACAATTTTCTAAATCGGACA 57.942 29.630 0.00 0.00 35.67 4.02
4886 6617 8.689251 AATCGGACATATATAGACATGTTTCG 57.311 34.615 0.00 0.00 35.55 3.46
4887 6618 7.443259 TCGGACATATATAGACATGTTTCGA 57.557 36.000 0.00 4.74 38.04 3.71
4907 6638 2.890808 TGTGTCTGTCCACTCACTTC 57.109 50.000 0.00 0.00 36.30 3.01
4911 6642 2.766263 TGTCTGTCCACTCACTTCAGTT 59.234 45.455 0.00 0.00 0.00 3.16
4922 6653 5.795939 CACTCACTTCAGTTCGTACATAGTC 59.204 44.000 0.00 0.00 0.00 2.59
4992 6723 4.327680 AGCATACTTTGAGAAAGGTGTCC 58.672 43.478 0.00 0.00 42.82 4.02
5083 6836 6.826668 TCTGTCTTCTCCTTTTCACATTACA 58.173 36.000 0.00 0.00 0.00 2.41
5094 6847 9.619316 TCCTTTTCACATTACATTTATTGTTCG 57.381 29.630 0.00 0.00 39.87 3.95
5099 6852 5.027737 ACATTACATTTATTGTTCGCTGCG 58.972 37.500 17.25 17.25 39.87 5.18
5118 6871 1.215912 CATTGCCTGCCATGCGAAA 59.784 52.632 0.00 0.00 0.00 3.46
5135 6888 3.304257 CGAAAGCCATCTCTAGTCGATG 58.696 50.000 14.06 14.06 38.35 3.84
5255 7025 2.104967 TCCCCGAACGTGAACATCTAT 58.895 47.619 0.00 0.00 0.00 1.98
5633 7403 2.439883 GGCCTCGACGGGTACTCT 60.440 66.667 0.00 0.00 0.00 3.24
5636 7406 0.463474 GCCTCGACGGGTACTCTACT 60.463 60.000 0.00 0.00 0.00 2.57
5637 7407 1.297664 CCTCGACGGGTACTCTACTG 58.702 60.000 0.00 0.00 0.00 2.74
5644 7414 2.242882 GGGTACTCTACTGACCCCAA 57.757 55.000 0.00 0.00 46.24 4.12
5697 7509 1.671979 ACTGATGAATGCCATGGTCG 58.328 50.000 14.67 1.45 35.17 4.79
5698 7510 1.065199 ACTGATGAATGCCATGGTCGT 60.065 47.619 14.67 4.28 35.17 4.34
5848 7663 3.667360 ACGTAACCATCACTAAACCACC 58.333 45.455 0.00 0.00 0.00 4.61
5874 7690 4.487948 CATGGATTTGCATTCGTTCAGTT 58.512 39.130 0.00 0.00 0.00 3.16
5896 7712 6.982141 AGTTAACACACGACTAAAACTCATCA 59.018 34.615 8.61 0.00 0.00 3.07
5897 7713 5.652744 AACACACGACTAAAACTCATCAC 57.347 39.130 0.00 0.00 0.00 3.06
5900 7716 5.234329 ACACACGACTAAAACTCATCACTTG 59.766 40.000 0.00 0.00 0.00 3.16
5901 7717 4.211374 ACACGACTAAAACTCATCACTTGC 59.789 41.667 0.00 0.00 0.00 4.01
5902 7718 4.449068 CACGACTAAAACTCATCACTTGCT 59.551 41.667 0.00 0.00 0.00 3.91
6003 7950 1.016130 ACATCGACAAGGCGCTCAAG 61.016 55.000 7.64 0.00 0.00 3.02
6229 8179 4.639171 GCCCCAACGCCAACAACG 62.639 66.667 0.00 0.00 0.00 4.10
6299 8249 4.432741 GCTCAAGGGGGTCCAGGC 62.433 72.222 0.00 0.00 34.83 4.85
6420 8370 1.148048 GCTCCTCTTCATGGGGCTC 59.852 63.158 0.00 0.00 46.99 4.70
6494 8444 0.179043 CAGCAGCAGAGCCTCATCAT 60.179 55.000 0.00 0.00 34.23 2.45
6957 8922 0.250793 ACGTCGAACATATTGGCCCA 59.749 50.000 0.00 0.00 0.00 5.36
7125 9090 1.130054 AGCACCTCAAGGCAGGAGAA 61.130 55.000 6.96 0.00 39.32 2.87
7266 9231 5.175856 GGAGATTACATTCGAGGTTTGATCG 59.824 44.000 0.00 0.00 41.50 3.69
7267 9232 5.902681 AGATTACATTCGAGGTTTGATCGA 58.097 37.500 0.00 0.00 46.72 3.59
7334 9299 6.357367 ACATAGAGTGTAATTCCACCCATTC 58.643 40.000 0.00 0.00 39.91 2.67
7342 9307 3.652057 ATTCCACCCATTCTGGTAGTG 57.348 47.619 0.00 0.00 36.67 2.74
7408 9373 2.092212 AGGCTGTTGTAAGGGATGATGG 60.092 50.000 0.00 0.00 0.00 3.51
7426 9395 1.512156 GGGTTCGCCGCTTCTTCAAA 61.512 55.000 0.00 0.00 38.45 2.69
7427 9396 0.521735 GGTTCGCCGCTTCTTCAAAT 59.478 50.000 0.00 0.00 0.00 2.32
7428 9397 1.735571 GGTTCGCCGCTTCTTCAAATA 59.264 47.619 0.00 0.00 0.00 1.40
7429 9398 2.160813 GGTTCGCCGCTTCTTCAAATAA 59.839 45.455 0.00 0.00 0.00 1.40
7430 9399 3.365565 GGTTCGCCGCTTCTTCAAATAAA 60.366 43.478 0.00 0.00 0.00 1.40
7431 9400 3.740044 TCGCCGCTTCTTCAAATAAAG 57.260 42.857 0.00 0.00 0.00 1.85
7467 9437 8.352942 AGATCAATTAGTCCAACAAAAAGACAC 58.647 33.333 0.00 0.00 32.82 3.67
7500 9481 4.196971 TCCTCAATGAGAATGTCATGCAG 58.803 43.478 12.53 0.00 45.89 4.41
7512 9493 6.811665 AGAATGTCATGCAGATGTCAATTTTG 59.188 34.615 0.00 0.00 32.41 2.44
7517 9498 7.756272 TGTCATGCAGATGTCAATTTTGATAAC 59.244 33.333 0.00 0.00 39.73 1.89
7535 9516 9.500785 TTTGATAACTGATTGTATCACTTCACA 57.499 29.630 0.00 0.00 35.06 3.58
7536 9517 9.500785 TTGATAACTGATTGTATCACTTCACAA 57.499 29.630 0.00 0.00 38.89 3.33
7537 9518 9.500785 TGATAACTGATTGTATCACTTCACAAA 57.499 29.630 0.00 0.00 38.11 2.83
7538 9519 9.760660 GATAACTGATTGTATCACTTCACAAAC 57.239 33.333 0.00 0.00 38.11 2.93
7539 9520 7.566760 AACTGATTGTATCACTTCACAAACA 57.433 32.000 0.00 0.00 38.11 2.83
7540 9521 6.959361 ACTGATTGTATCACTTCACAAACAC 58.041 36.000 0.00 0.00 38.11 3.32
7541 9522 6.017109 ACTGATTGTATCACTTCACAAACACC 60.017 38.462 0.00 0.00 38.11 4.16
7542 9523 5.825151 TGATTGTATCACTTCACAAACACCA 59.175 36.000 0.00 0.00 38.11 4.17
7543 9524 6.319911 TGATTGTATCACTTCACAAACACCAA 59.680 34.615 0.00 0.00 38.11 3.67
7544 9525 5.493133 TGTATCACTTCACAAACACCAAC 57.507 39.130 0.00 0.00 0.00 3.77
7545 9526 5.189928 TGTATCACTTCACAAACACCAACT 58.810 37.500 0.00 0.00 0.00 3.16
7546 9527 6.350103 TGTATCACTTCACAAACACCAACTA 58.650 36.000 0.00 0.00 0.00 2.24
7547 9528 6.481976 TGTATCACTTCACAAACACCAACTAG 59.518 38.462 0.00 0.00 0.00 2.57
7548 9529 3.625764 TCACTTCACAAACACCAACTAGC 59.374 43.478 0.00 0.00 0.00 3.42
7549 9530 2.949644 ACTTCACAAACACCAACTAGCC 59.050 45.455 0.00 0.00 0.00 3.93
7550 9531 3.214328 CTTCACAAACACCAACTAGCCT 58.786 45.455 0.00 0.00 0.00 4.58
7551 9532 3.290948 TCACAAACACCAACTAGCCTT 57.709 42.857 0.00 0.00 0.00 4.35
7564 9545 7.228706 CACCAACTAGCCTTAAATATAACCAGG 59.771 40.741 0.00 0.00 0.00 4.45
7576 9557 7.971368 AAATATAACCAGGCTTGTACCAAAT 57.029 32.000 0.00 0.00 0.00 2.32
7583 9564 4.522789 CCAGGCTTGTACCAAATTAACAGT 59.477 41.667 0.00 0.00 0.00 3.55
7584 9565 5.335661 CCAGGCTTGTACCAAATTAACAGTC 60.336 44.000 0.00 0.00 0.00 3.51
7585 9566 5.240623 CAGGCTTGTACCAAATTAACAGTCA 59.759 40.000 0.00 0.00 0.00 3.41
7586 9567 5.830991 AGGCTTGTACCAAATTAACAGTCAA 59.169 36.000 0.00 0.00 0.00 3.18
7587 9568 6.322712 AGGCTTGTACCAAATTAACAGTCAAA 59.677 34.615 0.00 0.00 0.00 2.69
7588 9569 7.015195 AGGCTTGTACCAAATTAACAGTCAAAT 59.985 33.333 0.00 0.00 0.00 2.32
7590 9571 9.685828 GCTTGTACCAAATTAACAGTCAAATAA 57.314 29.630 0.00 0.00 0.00 1.40
7592 9573 9.685828 TTGTACCAAATTAACAGTCAAATAAGC 57.314 29.630 0.00 0.00 0.00 3.09
7595 9576 7.151976 ACCAAATTAACAGTCAAATAAGCACC 58.848 34.615 0.00 0.00 0.00 5.01
7596 9577 6.589907 CCAAATTAACAGTCAAATAAGCACCC 59.410 38.462 0.00 0.00 0.00 4.61
7597 9578 6.909550 AATTAACAGTCAAATAAGCACCCA 57.090 33.333 0.00 0.00 0.00 4.51
7598 9579 5.957842 TTAACAGTCAAATAAGCACCCAG 57.042 39.130 0.00 0.00 0.00 4.45
7599 9580 3.508845 ACAGTCAAATAAGCACCCAGT 57.491 42.857 0.00 0.00 0.00 4.00
7600 9581 3.832527 ACAGTCAAATAAGCACCCAGTT 58.167 40.909 0.00 0.00 0.00 3.16
7601 9582 3.569701 ACAGTCAAATAAGCACCCAGTTG 59.430 43.478 0.00 0.00 0.00 3.16
7602 9583 3.820467 CAGTCAAATAAGCACCCAGTTGA 59.180 43.478 0.00 0.00 0.00 3.18
7603 9584 4.074970 AGTCAAATAAGCACCCAGTTGAG 58.925 43.478 0.00 0.00 0.00 3.02
7604 9585 4.072131 GTCAAATAAGCACCCAGTTGAGA 58.928 43.478 0.00 0.00 0.00 3.27
7605 9586 4.072131 TCAAATAAGCACCCAGTTGAGAC 58.928 43.478 0.00 0.00 0.00 3.36
7606 9587 2.789409 ATAAGCACCCAGTTGAGACC 57.211 50.000 0.00 0.00 0.00 3.85
7607 9588 1.429930 TAAGCACCCAGTTGAGACCA 58.570 50.000 0.00 0.00 0.00 4.02
7608 9589 0.773644 AAGCACCCAGTTGAGACCAT 59.226 50.000 0.00 0.00 0.00 3.55
7609 9590 0.773644 AGCACCCAGTTGAGACCATT 59.226 50.000 0.00 0.00 0.00 3.16
7610 9591 1.168714 GCACCCAGTTGAGACCATTC 58.831 55.000 0.00 0.00 0.00 2.67
7645 9626 4.383931 ACAGAACTGTACAGACTAGGGA 57.616 45.455 29.30 0.00 42.90 4.20
7646 9627 4.337145 ACAGAACTGTACAGACTAGGGAG 58.663 47.826 29.30 15.51 42.90 4.30
7647 9628 4.043059 ACAGAACTGTACAGACTAGGGAGA 59.957 45.833 29.30 0.00 42.90 3.71
7648 9629 5.010933 CAGAACTGTACAGACTAGGGAGAA 58.989 45.833 29.30 0.00 0.00 2.87
7649 9630 5.654650 CAGAACTGTACAGACTAGGGAGAAT 59.345 44.000 29.30 0.00 0.00 2.40
7650 9631 5.654650 AGAACTGTACAGACTAGGGAGAATG 59.345 44.000 29.30 0.00 0.00 2.67
7651 9632 3.702045 ACTGTACAGACTAGGGAGAATGC 59.298 47.826 29.30 0.00 0.00 3.56
7661 9642 3.959478 GGAGAATGCCATGCACATG 57.041 52.632 3.56 3.56 43.04 3.21
7662 9643 1.108776 GGAGAATGCCATGCACATGT 58.891 50.000 9.63 0.00 43.04 3.21
7663 9644 1.066605 GGAGAATGCCATGCACATGTC 59.933 52.381 9.63 0.00 43.04 3.06
7664 9645 1.746787 GAGAATGCCATGCACATGTCA 59.253 47.619 9.63 3.34 43.04 3.58
7665 9646 2.164827 GAGAATGCCATGCACATGTCAA 59.835 45.455 9.63 0.00 43.04 3.18
7666 9647 2.764010 AGAATGCCATGCACATGTCAAT 59.236 40.909 9.63 0.00 43.04 2.57
7667 9648 3.196901 AGAATGCCATGCACATGTCAATT 59.803 39.130 9.63 6.22 43.04 2.32
7668 9649 2.371910 TGCCATGCACATGTCAATTG 57.628 45.000 9.63 0.00 37.11 2.32
7669 9650 1.619332 TGCCATGCACATGTCAATTGT 59.381 42.857 5.13 0.00 37.11 2.71
7670 9651 1.996898 GCCATGCACATGTCAATTGTG 59.003 47.619 5.13 2.70 45.74 3.33
7671 9652 2.352912 GCCATGCACATGTCAATTGTGA 60.353 45.455 10.18 0.00 45.83 3.58
7672 9653 3.677700 GCCATGCACATGTCAATTGTGAT 60.678 43.478 10.18 0.00 45.83 3.06
7673 9654 4.440387 GCCATGCACATGTCAATTGTGATA 60.440 41.667 10.18 0.08 45.83 2.15
7674 9655 5.652518 CCATGCACATGTCAATTGTGATAA 58.347 37.500 10.18 0.00 45.83 1.75
7675 9656 6.277605 CCATGCACATGTCAATTGTGATAAT 58.722 36.000 10.18 0.00 45.83 1.28
7676 9657 6.759356 CCATGCACATGTCAATTGTGATAATT 59.241 34.615 10.18 0.00 45.83 1.40
7677 9658 7.254286 CCATGCACATGTCAATTGTGATAATTG 60.254 37.037 10.18 8.17 45.83 2.32
7678 9659 6.921914 TGCACATGTCAATTGTGATAATTGA 58.078 32.000 12.44 12.44 45.83 2.57
7679 9660 7.548967 TGCACATGTCAATTGTGATAATTGAT 58.451 30.769 18.11 3.32 45.83 2.57
7680 9661 8.684520 TGCACATGTCAATTGTGATAATTGATA 58.315 29.630 18.11 16.15 45.83 2.15
7681 9662 9.177304 GCACATGTCAATTGTGATAATTGATAG 57.823 33.333 18.11 13.55 45.83 2.08
7711 9692 8.863049 CACTTCACAAACAAAATATAATCAGGC 58.137 33.333 0.00 0.00 0.00 4.85
7712 9693 8.806146 ACTTCACAAACAAAATATAATCAGGCT 58.194 29.630 0.00 0.00 0.00 4.58
7713 9694 9.643693 CTTCACAAACAAAATATAATCAGGCTT 57.356 29.630 0.00 0.00 0.00 4.35
7714 9695 8.984891 TCACAAACAAAATATAATCAGGCTTG 57.015 30.769 0.00 0.00 0.00 4.01
7715 9696 8.584157 TCACAAACAAAATATAATCAGGCTTGT 58.416 29.630 0.00 0.00 0.00 3.16
7716 9697 9.853555 CACAAACAAAATATAATCAGGCTTGTA 57.146 29.630 0.00 0.00 0.00 2.41
7717 9698 9.855021 ACAAACAAAATATAATCAGGCTTGTAC 57.145 29.630 0.00 0.00 0.00 2.90
7718 9699 9.301153 CAAACAAAATATAATCAGGCTTGTACC 57.699 33.333 0.00 0.00 0.00 3.34
7719 9700 8.588290 AACAAAATATAATCAGGCTTGTACCA 57.412 30.769 0.00 0.00 0.00 3.25
7720 9701 8.588290 ACAAAATATAATCAGGCTTGTACCAA 57.412 30.769 0.00 0.00 0.00 3.67
7721 9702 9.030452 ACAAAATATAATCAGGCTTGTACCAAA 57.970 29.630 0.00 0.00 0.00 3.28
7722 9703 9.301153 CAAAATATAATCAGGCTTGTACCAAAC 57.699 33.333 0.00 0.00 0.00 2.93
7723 9704 8.823220 AAATATAATCAGGCTTGTACCAAACT 57.177 30.769 0.00 0.00 0.00 2.66
7724 9705 9.914834 AAATATAATCAGGCTTGTACCAAACTA 57.085 29.630 0.00 0.00 0.00 2.24
7725 9706 9.914834 AATATAATCAGGCTTGTACCAAACTAA 57.085 29.630 0.00 0.00 0.00 2.24
7726 9707 5.959618 AATCAGGCTTGTACCAAACTAAC 57.040 39.130 0.00 0.00 0.00 2.34
7727 9708 4.425180 TCAGGCTTGTACCAAACTAACA 57.575 40.909 0.00 0.00 0.00 2.41
7728 9709 4.385825 TCAGGCTTGTACCAAACTAACAG 58.614 43.478 0.00 0.00 0.00 3.16
7890 9892 4.297510 TCATTCATGTTGCAGAAAAACGG 58.702 39.130 0.00 0.00 0.00 4.44
7901 9904 4.808364 TGCAGAAAAACGGAAAAAGGAATG 59.192 37.500 0.00 0.00 0.00 2.67
7902 9905 4.318760 GCAGAAAAACGGAAAAAGGAATGC 60.319 41.667 0.00 0.00 0.00 3.56
7904 9907 4.808895 AGAAAAACGGAAAAAGGAATGCAC 59.191 37.500 0.00 0.00 0.00 4.57
7905 9908 2.812358 AACGGAAAAAGGAATGCACC 57.188 45.000 0.00 0.00 0.00 5.01
7907 9910 1.613437 ACGGAAAAAGGAATGCACCAG 59.387 47.619 0.00 0.00 0.00 4.00
7908 9911 1.669795 CGGAAAAAGGAATGCACCAGC 60.670 52.381 0.00 0.00 42.57 4.85
7909 9912 1.620323 GGAAAAAGGAATGCACCAGCT 59.380 47.619 0.00 0.00 42.74 4.24
7910 9913 2.825532 GGAAAAAGGAATGCACCAGCTA 59.174 45.455 0.00 0.00 42.74 3.32
7915 9918 1.709147 GGAATGCACCAGCTAGCACG 61.709 60.000 18.83 8.56 44.49 5.34
7918 9931 1.021390 ATGCACCAGCTAGCACGAAC 61.021 55.000 18.83 3.76 44.49 3.95
7941 9954 5.252164 ACCTGGCTCAAGTATACCCTTTTTA 59.748 40.000 0.00 0.00 0.00 1.52
7979 9992 2.029838 ATTCTTTAGGTCTGGCTGCG 57.970 50.000 0.00 0.00 0.00 5.18
7986 9999 1.220749 GGTCTGGCTGCGTGGATAA 59.779 57.895 0.00 0.00 0.00 1.75
8070 10083 6.073058 TGAGAATGTGTGCTTCTTGTGATTAC 60.073 38.462 0.00 0.00 33.18 1.89
8160 10173 1.982073 CTTTCATCGCGCCCCTGAAC 61.982 60.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.036294 GGAGGGTTTCTCACGAAGGG 60.036 60.000 0.00 0.00 44.19 3.95
8 9 1.066787 GGAGGAGGGTTTCTCACGAAG 60.067 57.143 0.00 0.00 44.19 3.79
12 13 0.974383 TTCGGAGGAGGGTTTCTCAC 59.026 55.000 0.00 0.00 44.19 3.51
14 15 0.974383 TGTTCGGAGGAGGGTTTCTC 59.026 55.000 0.00 0.00 41.71 2.87
27 28 3.480470 AGATGCATTATCCCTTGTTCGG 58.520 45.455 0.00 0.00 36.40 4.30
29 30 6.645790 ATCAAGATGCATTATCCCTTGTTC 57.354 37.500 19.05 0.00 36.40 3.18
42 43 6.761312 AGTTTTGGAATCAAATCAAGATGCA 58.239 32.000 0.00 0.00 41.84 3.96
43 44 6.312180 GGAGTTTTGGAATCAAATCAAGATGC 59.688 38.462 0.00 0.00 41.84 3.91
48 49 6.098124 ACTGTGGAGTTTTGGAATCAAATCAA 59.902 34.615 0.00 0.00 41.84 2.57
69 71 3.833070 AGAAGTTTCGGGAGATACACTGT 59.167 43.478 0.00 0.00 42.28 3.55
70 72 4.457834 AGAAGTTTCGGGAGATACACTG 57.542 45.455 0.00 0.00 42.28 3.66
77 79 3.236896 ACCACTAAGAAGTTTCGGGAGA 58.763 45.455 0.00 0.00 31.97 3.71
81 83 3.746492 CCAGAACCACTAAGAAGTTTCGG 59.254 47.826 0.00 0.00 31.97 4.30
83 85 4.134563 TGCCAGAACCACTAAGAAGTTTC 58.865 43.478 0.00 0.00 31.97 2.78
85 87 3.857157 TGCCAGAACCACTAAGAAGTT 57.143 42.857 0.00 0.00 31.97 2.66
86 88 3.307762 GGATGCCAGAACCACTAAGAAGT 60.308 47.826 0.00 0.00 35.91 3.01
87 89 3.274288 GGATGCCAGAACCACTAAGAAG 58.726 50.000 0.00 0.00 0.00 2.85
88 90 2.026262 GGGATGCCAGAACCACTAAGAA 60.026 50.000 0.00 0.00 0.00 2.52
89 91 1.559682 GGGATGCCAGAACCACTAAGA 59.440 52.381 0.00 0.00 0.00 2.10
90 92 1.561542 AGGGATGCCAGAACCACTAAG 59.438 52.381 5.86 0.00 0.00 2.18
91 93 1.281867 CAGGGATGCCAGAACCACTAA 59.718 52.381 5.86 0.00 0.00 2.24
92 94 0.911769 CAGGGATGCCAGAACCACTA 59.088 55.000 5.86 0.00 0.00 2.74
93 95 1.136329 ACAGGGATGCCAGAACCACT 61.136 55.000 5.86 0.00 0.00 4.00
94 96 0.962356 CACAGGGATGCCAGAACCAC 60.962 60.000 5.86 0.00 0.00 4.16
95 97 1.133181 TCACAGGGATGCCAGAACCA 61.133 55.000 5.86 0.00 0.00 3.67
96 98 0.678048 GTCACAGGGATGCCAGAACC 60.678 60.000 5.86 0.00 0.00 3.62
97 99 0.326264 AGTCACAGGGATGCCAGAAC 59.674 55.000 5.86 2.01 0.00 3.01
101 103 1.003118 GTGTTAGTCACAGGGATGCCA 59.997 52.381 5.86 0.00 45.51 4.92
104 106 4.223032 ACTAAGGTGTTAGTCACAGGGATG 59.777 45.833 0.62 0.00 44.81 3.51
142 144 9.347934 CTCGATATTACAGTATCCAACATCTTC 57.652 37.037 0.00 0.00 0.00 2.87
144 146 8.300286 CACTCGATATTACAGTATCCAACATCT 58.700 37.037 0.00 0.00 0.00 2.90
157 159 3.562182 TCTGGGCTCACTCGATATTACA 58.438 45.455 0.00 0.00 0.00 2.41
167 169 2.383855 GAGATACACTCTGGGCTCACT 58.616 52.381 0.00 0.00 41.94 3.41
191 193 3.399330 TGAGATTTGACCCTTCAACGAC 58.601 45.455 0.00 0.00 41.64 4.34
195 197 4.982241 AGACTGAGATTTGACCCTTCAA 57.018 40.909 0.00 0.00 40.14 2.69
196 198 4.347876 TCAAGACTGAGATTTGACCCTTCA 59.652 41.667 0.00 0.00 0.00 3.02
244 246 1.100510 CCTCGTCGTAGGTGGAATGA 58.899 55.000 0.00 0.00 31.46 2.57
255 257 4.152045 CGAATTAGATAGCTACCTCGTCGT 59.848 45.833 0.00 0.00 31.30 4.34
258 260 4.154556 GCTCGAATTAGATAGCTACCTCGT 59.845 45.833 14.29 0.00 34.72 4.18
282 284 1.407575 GGCCTTTTAGCTCTGACTCCC 60.408 57.143 0.00 0.00 0.00 4.30
308 310 4.230657 AGAAGAAACTTGATCGACGTGAG 58.769 43.478 0.00 0.00 0.00 3.51
315 317 4.091220 GCAGACAGAGAAGAAACTTGATCG 59.909 45.833 0.00 0.00 0.00 3.69
366 370 3.560636 AAGACTATGTCCGAAATGGGG 57.439 47.619 0.00 0.00 38.76 4.96
373 377 2.219458 CCTCGCTAAGACTATGTCCGA 58.781 52.381 0.00 0.00 32.18 4.55
379 383 1.069358 GCAAGGCCTCGCTAAGACTAT 59.931 52.381 8.93 0.00 0.00 2.12
414 418 2.420058 AGGTGTAAACTAGCCATGGC 57.580 50.000 30.12 30.12 42.33 4.40
459 463 4.153475 GCAATTCCTAGTCGCAACAACTAA 59.847 41.667 0.00 0.00 0.00 2.24
472 476 6.377327 AATATCCAAACACGCAATTCCTAG 57.623 37.500 0.00 0.00 0.00 3.02
473 477 6.767524 AAATATCCAAACACGCAATTCCTA 57.232 33.333 0.00 0.00 0.00 2.94
476 480 8.856490 AATCTAAATATCCAAACACGCAATTC 57.144 30.769 0.00 0.00 0.00 2.17
495 499 6.709846 CCAAATGCCCACAAAAGAAAATCTAA 59.290 34.615 0.00 0.00 0.00 2.10
594 599 0.514255 GTTTCGTGGCCTCGGTTAAC 59.486 55.000 25.62 21.03 0.00 2.01
627 632 4.481112 CTTGCGTGCCGGGCATTC 62.481 66.667 26.68 19.32 41.91 2.67
632 637 0.741574 TATGTAACTTGCGTGCCGGG 60.742 55.000 2.18 0.00 0.00 5.73
633 638 1.260561 GATATGTAACTTGCGTGCCGG 59.739 52.381 0.00 0.00 0.00 6.13
634 639 2.201732 AGATATGTAACTTGCGTGCCG 58.798 47.619 0.00 0.00 0.00 5.69
757 775 0.522626 TCACCTTCGCATGCATGTTG 59.477 50.000 26.79 19.39 0.00 3.33
759 777 0.036105 TCTCACCTTCGCATGCATGT 60.036 50.000 26.79 3.89 0.00 3.21
800 818 2.572290 TGATACGCTGCTAGAGTGCTA 58.428 47.619 0.00 0.00 35.37 3.49
801 819 1.393603 TGATACGCTGCTAGAGTGCT 58.606 50.000 0.00 0.00 35.37 4.40
802 820 2.430546 ATGATACGCTGCTAGAGTGC 57.569 50.000 0.00 0.00 35.37 4.40
804 822 6.238621 GCTATGATATGATACGCTGCTAGAGT 60.239 42.308 0.00 0.00 31.78 3.24
806 824 5.590259 TGCTATGATATGATACGCTGCTAGA 59.410 40.000 0.00 0.00 0.00 2.43
807 825 5.825507 TGCTATGATATGATACGCTGCTAG 58.174 41.667 0.00 0.00 0.00 3.42
837 855 4.950050 ACTGCTGTTATACTACTGCCATC 58.050 43.478 0.00 0.00 40.86 3.51
853 871 1.212455 TTGCGTGTGACGTACTGCTG 61.212 55.000 0.00 0.00 44.73 4.41
894 912 3.221389 CATGGCCAATGGGAGCGG 61.221 66.667 10.96 0.00 35.59 5.52
1031 1049 0.764890 AAGCAGCCTCTGTAACACCA 59.235 50.000 0.00 0.00 33.43 4.17
1036 1054 0.979665 AGCAGAAGCAGCCTCTGTAA 59.020 50.000 20.12 0.00 45.49 2.41
1214 1235 2.196382 CTTCTCCGCGGTCGTCAGAA 62.196 60.000 27.15 23.43 33.98 3.02
1215 1236 2.670592 TTCTCCGCGGTCGTCAGA 60.671 61.111 27.15 17.50 0.00 3.27
1547 1575 2.195123 AAACTGCCGCACGCCATTAC 62.195 55.000 0.00 0.00 36.24 1.89
1636 1665 0.040646 CATGATATGCCTGGGCCCAT 59.959 55.000 28.82 13.82 41.09 4.00
1718 2065 4.154918 CACGGATCAGGAAAGGAAAGAAAG 59.845 45.833 0.00 0.00 0.00 2.62
1732 2079 2.679837 CTGTTCCCAAATCACGGATCAG 59.320 50.000 0.00 0.00 38.80 2.90
1807 2179 8.848474 AAAAACAAAGCTAGCATCTAGAGTAA 57.152 30.769 18.83 0.00 0.00 2.24
1808 2180 8.094548 TGAAAAACAAAGCTAGCATCTAGAGTA 58.905 33.333 18.83 0.00 0.00 2.59
1809 2181 6.936900 TGAAAAACAAAGCTAGCATCTAGAGT 59.063 34.615 18.83 2.42 0.00 3.24
1810 2182 7.118971 ACTGAAAAACAAAGCTAGCATCTAGAG 59.881 37.037 18.83 1.77 0.00 2.43
1811 2183 6.936900 ACTGAAAAACAAAGCTAGCATCTAGA 59.063 34.615 18.83 0.00 0.00 2.43
1909 2281 9.780186 CTCCTTCCGTTCCTAAATATTTATCTT 57.220 33.333 8.34 0.00 0.00 2.40
1910 2282 8.935741 ACTCCTTCCGTTCCTAAATATTTATCT 58.064 33.333 8.34 0.00 0.00 1.98
1921 2293 9.678260 GAGTAATATATACTCCTTCCGTTCCTA 57.322 37.037 4.62 0.00 38.33 2.94
1922 2294 8.392479 AGAGTAATATATACTCCTTCCGTTCCT 58.608 37.037 11.03 0.00 43.61 3.36
1923 2295 8.578448 AGAGTAATATATACTCCTTCCGTTCC 57.422 38.462 11.03 0.00 43.61 3.62
1924 2296 9.452287 AGAGAGTAATATATACTCCTTCCGTTC 57.548 37.037 11.03 2.58 43.61 3.95
1925 2297 9.810870 AAGAGAGTAATATATACTCCTTCCGTT 57.189 33.333 11.03 0.00 43.61 4.44
1926 2298 9.233649 CAAGAGAGTAATATATACTCCTTCCGT 57.766 37.037 11.03 0.00 43.61 4.69
1927 2299 9.233649 ACAAGAGAGTAATATATACTCCTTCCG 57.766 37.037 11.03 7.06 43.61 4.30
1929 2301 9.849166 GCACAAGAGAGTAATATATACTCCTTC 57.151 37.037 11.03 4.90 43.61 3.46
1930 2302 8.808092 GGCACAAGAGAGTAATATATACTCCTT 58.192 37.037 11.03 10.87 43.61 3.36
1931 2303 8.174085 AGGCACAAGAGAGTAATATATACTCCT 58.826 37.037 11.03 6.45 43.61 3.69
1932 2304 8.356000 AGGCACAAGAGAGTAATATATACTCC 57.644 38.462 11.03 4.65 43.61 3.85
1933 2305 9.015367 TGAGGCACAAGAGAGTAATATATACTC 57.985 37.037 7.39 7.39 43.08 2.59
1934 2306 8.941995 TGAGGCACAAGAGAGTAATATATACT 57.058 34.615 0.00 0.00 0.00 2.12
1935 2307 9.982651 TTTGAGGCACAAGAGAGTAATATATAC 57.017 33.333 0.00 0.00 39.77 1.47
1939 2311 7.885399 ACTTTTTGAGGCACAAGAGAGTAATAT 59.115 33.333 13.87 0.00 39.77 1.28
1952 2324 8.244113 GGGCAATATATATACTTTTTGAGGCAC 58.756 37.037 7.64 0.00 0.00 5.01
1964 2336 7.766278 CACCTGACAAGAGGGCAATATATATAC 59.234 40.741 0.00 0.00 37.45 1.47
1965 2337 7.678171 TCACCTGACAAGAGGGCAATATATATA 59.322 37.037 0.00 0.00 37.45 0.86
1967 2339 5.843969 TCACCTGACAAGAGGGCAATATATA 59.156 40.000 0.00 0.00 37.45 0.86
1972 2344 1.004044 CTCACCTGACAAGAGGGCAAT 59.996 52.381 0.00 0.00 37.45 3.56
1973 2345 0.397941 CTCACCTGACAAGAGGGCAA 59.602 55.000 0.00 0.00 37.45 4.52
1974 2346 0.471780 TCTCACCTGACAAGAGGGCA 60.472 55.000 0.00 0.00 37.45 5.36
1975 2347 0.908198 ATCTCACCTGACAAGAGGGC 59.092 55.000 0.00 0.00 37.45 5.19
2036 2412 8.848182 ACTATAATTCCTTTCCTAGAGTGTACG 58.152 37.037 0.00 0.00 0.00 3.67
2119 2866 2.029743 CCACGTCCTTTGTGTTGGG 58.970 57.895 0.00 0.00 35.56 4.12
2259 3043 8.203485 AGATGGAGAACTTTGACAGATTAGATC 58.797 37.037 0.00 0.00 0.00 2.75
2278 3062 6.183360 CCAAAATACAGTAAGCACAGATGGAG 60.183 42.308 0.00 0.00 0.00 3.86
2284 3068 6.183360 CGACTACCAAAATACAGTAAGCACAG 60.183 42.308 0.00 0.00 0.00 3.66
2288 3080 6.956299 TTCGACTACCAAAATACAGTAAGC 57.044 37.500 0.00 0.00 0.00 3.09
2291 3083 7.550196 GGGAAATTCGACTACCAAAATACAGTA 59.450 37.037 0.00 0.00 0.00 2.74
2295 3087 6.997239 AGGGAAATTCGACTACCAAAATAC 57.003 37.500 0.00 0.00 0.00 1.89
2302 3094 3.268330 GACCAAGGGAAATTCGACTACC 58.732 50.000 0.00 0.00 0.00 3.18
2307 3099 1.338389 GGTCGACCAAGGGAAATTCGA 60.338 52.381 29.75 0.00 36.41 3.71
2309 3101 2.194201 TGGTCGACCAAGGGAAATTC 57.806 50.000 34.60 3.87 44.35 2.17
2322 3114 5.824624 AGTATTAAATCCTAGTCGTGGTCGA 59.175 40.000 0.00 0.00 44.12 4.20
2324 3116 7.035840 TGAGTATTAAATCCTAGTCGTGGTC 57.964 40.000 0.00 0.00 0.00 4.02
2352 3144 3.640029 CTCCGGCCACTTTACCTCTAATA 59.360 47.826 2.24 0.00 0.00 0.98
2353 3145 2.434702 CTCCGGCCACTTTACCTCTAAT 59.565 50.000 2.24 0.00 0.00 1.73
2354 3146 1.829222 CTCCGGCCACTTTACCTCTAA 59.171 52.381 2.24 0.00 0.00 2.10
2355 3147 1.481871 CTCCGGCCACTTTACCTCTA 58.518 55.000 2.24 0.00 0.00 2.43
2356 3148 1.900545 GCTCCGGCCACTTTACCTCT 61.901 60.000 2.24 0.00 0.00 3.69
2357 3149 1.449778 GCTCCGGCCACTTTACCTC 60.450 63.158 2.24 0.00 0.00 3.85
2391 3201 9.787532 ATTTGATAATTTGGACGTACTTCATTG 57.212 29.630 0.00 0.00 0.00 2.82
2425 3269 6.890268 GGGTTTGTTTCTAGGGAGAATAACAT 59.110 38.462 0.00 0.00 41.40 2.71
2430 3274 5.536497 ATGGGTTTGTTTCTAGGGAGAAT 57.464 39.130 0.00 0.00 41.40 2.40
2439 3283 5.301805 CAGTTTGTCCTATGGGTTTGTTTCT 59.698 40.000 0.00 0.00 0.00 2.52
2440 3284 5.528870 CAGTTTGTCCTATGGGTTTGTTTC 58.471 41.667 0.00 0.00 0.00 2.78
2444 3288 2.231235 GGCAGTTTGTCCTATGGGTTTG 59.769 50.000 0.00 0.00 0.00 2.93
2445 3289 2.525368 GGCAGTTTGTCCTATGGGTTT 58.475 47.619 0.00 0.00 0.00 3.27
2446 3290 1.613255 CGGCAGTTTGTCCTATGGGTT 60.613 52.381 0.00 0.00 0.00 4.11
2447 3291 0.035439 CGGCAGTTTGTCCTATGGGT 60.035 55.000 0.00 0.00 0.00 4.51
2448 3292 0.035439 ACGGCAGTTTGTCCTATGGG 60.035 55.000 0.00 0.00 0.00 4.00
2476 3320 3.324108 GGTGCCCTCCGGGTGTTA 61.324 66.667 0.00 0.00 46.51 2.41
2501 3345 2.039613 GCTGGAGATGCCCTTATAGCTT 59.960 50.000 0.00 0.00 34.97 3.74
2899 4547 2.667199 TCCTCGACAGCGACGACA 60.667 61.111 0.00 0.00 42.51 4.35
3093 4747 1.379977 TCCTCGTCGAGCCCAAGAT 60.380 57.895 17.02 0.00 0.00 2.40
3094 4748 2.035155 TCCTCGTCGAGCCCAAGA 59.965 61.111 17.02 5.43 0.00 3.02
3498 5209 3.066814 GTACGTCCCCGACAGCCT 61.067 66.667 0.00 0.00 37.88 4.58
3691 5402 0.171231 CCATCTGCACGAGAACGAGA 59.829 55.000 0.00 0.00 42.66 4.04
3753 5464 4.720902 CACACCCATGGCCGAGCA 62.721 66.667 6.09 0.00 0.00 4.26
3796 5509 1.584380 CGTCGTCGTTCCTCCCTCTT 61.584 60.000 0.00 0.00 0.00 2.85
3890 5605 1.214325 CCGCCACACGTACTCATGA 59.786 57.895 0.00 0.00 41.42 3.07
3964 5679 0.815213 GTCAGCCTGCGCCATTGATA 60.815 55.000 4.18 0.00 34.57 2.15
4249 5970 2.329267 TCAGAAAGGCCTTCTCAGACA 58.671 47.619 20.79 0.00 42.84 3.41
4255 5977 1.528129 CGCTTTCAGAAAGGCCTTCT 58.472 50.000 20.79 14.65 45.80 2.85
4314 6037 1.005037 TTGGCACTCACCGCACTAG 60.005 57.895 0.00 0.00 0.00 2.57
4391 6114 4.740822 ACATGTGGCCGGCTTCCC 62.741 66.667 28.56 10.32 0.00 3.97
4392 6115 3.443045 CACATGTGGCCGGCTTCC 61.443 66.667 28.56 14.79 0.00 3.46
4393 6116 2.359850 TCACATGTGGCCGGCTTC 60.360 61.111 28.56 19.51 0.00 3.86
4394 6117 2.360350 CTCACATGTGGCCGGCTT 60.360 61.111 28.56 6.12 0.00 4.35
4453 6176 2.115734 AAAAGGTCGGGTACGGTGGG 62.116 60.000 0.00 0.00 41.39 4.61
4457 6180 0.250424 AACCAAAAGGTCGGGTACGG 60.250 55.000 0.00 0.00 41.39 4.02
4510 6233 2.086251 AACTTGTGGCATTGTGGGCG 62.086 55.000 0.00 0.00 35.84 6.13
4528 6252 0.682292 TGTGTACCGTCAGGCATGAA 59.318 50.000 0.92 0.00 42.76 2.57
4586 6313 2.927871 GCCAGAATCAAACCACATGCAC 60.928 50.000 0.00 0.00 0.00 4.57
4595 6322 9.294030 CTTTAACTAATCATGCCAGAATCAAAC 57.706 33.333 0.00 0.00 0.00 2.93
4631 6358 1.440518 CGACATACTCGATCCGGCG 60.441 63.158 0.00 0.00 46.14 6.46
4640 6367 7.533426 TCTAACTTGGAGTTAACGACATACTC 58.467 38.462 0.00 0.00 39.89 2.59
4656 6383 8.936864 CATAAAGTTGGTAGAACTCTAACTTGG 58.063 37.037 7.84 0.24 37.08 3.61
4663 6390 7.104290 GCCTAACATAAAGTTGGTAGAACTCT 58.896 38.462 0.00 0.00 38.89 3.24
4718 6445 4.614284 CGATTAGCTGTTTTTGCAGACTTG 59.386 41.667 0.00 0.00 38.70 3.16
4732 6459 5.788531 CGAACAAACCTAAAACGATTAGCTG 59.211 40.000 0.00 0.00 0.00 4.24
4733 6460 5.106830 CCGAACAAACCTAAAACGATTAGCT 60.107 40.000 0.00 0.00 0.00 3.32
4734 6461 5.084055 CCGAACAAACCTAAAACGATTAGC 58.916 41.667 0.00 0.00 0.00 3.09
4735 6462 6.073657 TGACCGAACAAACCTAAAACGATTAG 60.074 38.462 0.00 0.00 0.00 1.73
4736 6463 5.757320 TGACCGAACAAACCTAAAACGATTA 59.243 36.000 0.00 0.00 0.00 1.75
4737 6464 4.575645 TGACCGAACAAACCTAAAACGATT 59.424 37.500 0.00 0.00 0.00 3.34
4739 6466 3.529533 TGACCGAACAAACCTAAAACGA 58.470 40.909 0.00 0.00 0.00 3.85
4740 6467 3.948196 TGACCGAACAAACCTAAAACG 57.052 42.857 0.00 0.00 0.00 3.60
4741 6468 4.039703 GCTTGACCGAACAAACCTAAAAC 58.960 43.478 0.00 0.00 0.00 2.43
4742 6469 3.695060 TGCTTGACCGAACAAACCTAAAA 59.305 39.130 0.00 0.00 0.00 1.52
4743 6470 3.065648 GTGCTTGACCGAACAAACCTAAA 59.934 43.478 0.00 0.00 0.00 1.85
4772 6503 5.048013 TGAACTGCCGGTATATATGACTGAG 60.048 44.000 1.90 0.00 0.00 3.35
4801 6532 4.989168 CGAAGGAAGTACAACTTAAGCACT 59.011 41.667 1.29 0.00 38.80 4.40
4807 6538 4.278170 TCCGAACGAAGGAAGTACAACTTA 59.722 41.667 0.00 0.00 38.80 2.24
4808 6539 3.068590 TCCGAACGAAGGAAGTACAACTT 59.931 43.478 0.00 0.00 41.95 2.66
4818 6549 7.572523 TCTAATAGTAATTCCGAACGAAGGA 57.427 36.000 0.00 0.00 32.78 3.36
4822 6553 8.627403 AGAACATCTAATAGTAATTCCGAACGA 58.373 33.333 0.00 0.00 0.00 3.85
4885 6616 1.270826 AGTGAGTGGACAGACACATCG 59.729 52.381 0.00 0.00 43.72 3.84
4886 6617 3.243873 TGAAGTGAGTGGACAGACACATC 60.244 47.826 0.00 0.00 43.72 3.06
4887 6618 2.700371 TGAAGTGAGTGGACAGACACAT 59.300 45.455 0.00 0.00 43.72 3.21
4948 6679 1.133262 CCACCTCCCCTCCGAGTTATA 60.133 57.143 0.00 0.00 0.00 0.98
5026 6757 6.527722 ACAATAATTAAGACATGCTTGCAACG 59.472 34.615 11.24 0.00 37.42 4.10
5114 6867 3.304257 CATCGACTAGAGATGGCTTTCG 58.696 50.000 18.58 6.27 41.16 3.46
5140 6893 2.661979 GCCGACGTGTCATTTTCTTGAC 60.662 50.000 0.00 0.00 45.05 3.18
5142 6895 1.721489 CGCCGACGTGTCATTTTCTTG 60.721 52.381 0.00 0.00 33.53 3.02
5143 6896 0.511221 CGCCGACGTGTCATTTTCTT 59.489 50.000 0.00 0.00 33.53 2.52
5144 6897 2.150424 CGCCGACGTGTCATTTTCT 58.850 52.632 0.00 0.00 33.53 2.52
5145 6898 4.717917 CGCCGACGTGTCATTTTC 57.282 55.556 0.00 0.00 33.53 2.29
5189 6959 3.622826 AGGTTGTACAGCGCCCGT 61.623 61.111 2.29 4.14 0.00 5.28
5402 7172 1.380112 GTCCTCCAGGTCGTAGGCT 60.380 63.158 0.00 0.00 36.34 4.58
5651 7428 4.915704 TGTGACTTCCAATCGAAACAAAC 58.084 39.130 0.00 0.00 0.00 2.93
5697 7509 0.026156 GCACGCAAGCAACCAAAAAC 59.974 50.000 0.00 0.00 45.62 2.43
5698 7510 1.416813 CGCACGCAAGCAACCAAAAA 61.417 50.000 0.00 0.00 45.62 1.94
5843 7658 0.609662 GCAAATCCATGCAAGGTGGT 59.390 50.000 8.03 0.00 45.70 4.16
5866 7681 5.624715 TTTAGTCGTGTGTTAACTGAACG 57.375 39.130 16.85 16.85 41.35 3.95
5874 7690 6.509656 AGTGATGAGTTTTAGTCGTGTGTTA 58.490 36.000 0.00 0.00 0.00 2.41
5900 7716 2.202987 CGATGTCCAGCCCTGAGC 60.203 66.667 0.00 0.00 44.25 4.26
5901 7717 1.142748 GTCGATGTCCAGCCCTGAG 59.857 63.158 0.00 0.00 0.00 3.35
5902 7718 1.305297 AGTCGATGTCCAGCCCTGA 60.305 57.895 0.00 0.00 0.00 3.86
6003 7950 2.506438 CGGACGGCGAAGAGGTTC 60.506 66.667 16.62 0.00 0.00 3.62
6205 8155 4.875713 GGCGTTGGGGCCGATGAT 62.876 66.667 0.00 0.00 44.40 2.45
6389 8339 1.303074 AGGAGCACGTAGTCGGACA 60.303 57.895 11.27 0.00 41.61 4.02
6420 8370 2.125065 CTCTCCTGCTGCTGGCTG 60.125 66.667 19.55 14.38 42.39 4.85
6930 8892 2.554806 TATGTTCGACGTGGTAGCTG 57.445 50.000 0.00 0.00 0.00 4.24
6957 8922 4.609018 AGCTGCTCGCACCGTTGT 62.609 61.111 0.00 0.00 42.61 3.32
7080 9045 0.036732 TGAACCCGATGAGCTGCTTT 59.963 50.000 2.53 0.00 0.00 3.51
7125 9090 2.887152 GTCAAATGTGAGTCTGGCCTTT 59.113 45.455 3.32 0.00 33.27 3.11
7266 9231 6.072064 CCTGCAAATCAATCAATCTAGGGATC 60.072 42.308 0.00 0.00 0.00 3.36
7267 9232 5.773680 CCTGCAAATCAATCAATCTAGGGAT 59.226 40.000 0.00 0.00 0.00 3.85
7269 9234 4.280174 CCCTGCAAATCAATCAATCTAGGG 59.720 45.833 0.00 0.00 35.62 3.53
7270 9235 5.135383 TCCCTGCAAATCAATCAATCTAGG 58.865 41.667 0.00 0.00 0.00 3.02
7408 9373 0.521735 ATTTGAAGAAGCGGCGAACC 59.478 50.000 12.98 0.00 0.00 3.62
7477 9447 4.591929 TGCATGACATTCTCATTGAGGAA 58.408 39.130 13.59 7.29 37.53 3.36
7478 9448 4.080751 TCTGCATGACATTCTCATTGAGGA 60.081 41.667 13.59 5.38 37.53 3.71
7481 9451 5.190677 ACATCTGCATGACATTCTCATTGA 58.809 37.500 0.00 0.00 37.53 2.57
7482 9452 5.065988 TGACATCTGCATGACATTCTCATTG 59.934 40.000 0.00 0.00 37.53 2.82
7484 9454 4.777463 TGACATCTGCATGACATTCTCAT 58.223 39.130 0.00 0.00 40.59 2.90
7485 9455 4.210724 TGACATCTGCATGACATTCTCA 57.789 40.909 0.00 0.00 30.87 3.27
7517 9498 6.017192 TGGTGTTTGTGAAGTGATACAATCAG 60.017 38.462 0.00 0.00 40.53 2.90
7530 9511 3.290948 AGGCTAGTTGGTGTTTGTGAA 57.709 42.857 0.00 0.00 0.00 3.18
7531 9512 3.290948 AAGGCTAGTTGGTGTTTGTGA 57.709 42.857 0.00 0.00 0.00 3.58
7532 9513 5.508200 TTTAAGGCTAGTTGGTGTTTGTG 57.492 39.130 0.00 0.00 0.00 3.33
7533 9514 9.523168 TTATATTTAAGGCTAGTTGGTGTTTGT 57.477 29.630 0.00 0.00 0.00 2.83
7534 9515 9.783256 GTTATATTTAAGGCTAGTTGGTGTTTG 57.217 33.333 0.00 0.00 0.00 2.93
7535 9516 8.963725 GGTTATATTTAAGGCTAGTTGGTGTTT 58.036 33.333 0.00 0.00 0.00 2.83
7536 9517 8.110908 TGGTTATATTTAAGGCTAGTTGGTGTT 58.889 33.333 0.00 0.00 0.00 3.32
7537 9518 7.635648 TGGTTATATTTAAGGCTAGTTGGTGT 58.364 34.615 0.00 0.00 0.00 4.16
7538 9519 7.228706 CCTGGTTATATTTAAGGCTAGTTGGTG 59.771 40.741 0.00 0.00 0.00 4.17
7539 9520 7.287810 CCTGGTTATATTTAAGGCTAGTTGGT 58.712 38.462 0.00 0.00 0.00 3.67
7540 9521 7.745620 CCTGGTTATATTTAAGGCTAGTTGG 57.254 40.000 0.00 0.00 0.00 3.77
7548 9529 7.057894 TGGTACAAGCCTGGTTATATTTAAGG 58.942 38.462 0.00 0.00 31.92 2.69
7576 9557 5.381757 ACTGGGTGCTTATTTGACTGTTAA 58.618 37.500 0.00 0.00 0.00 2.01
7583 9564 4.072131 GTCTCAACTGGGTGCTTATTTGA 58.928 43.478 0.00 0.00 0.00 2.69
7584 9565 3.191371 GGTCTCAACTGGGTGCTTATTTG 59.809 47.826 0.00 0.00 0.00 2.32
7585 9566 3.181434 TGGTCTCAACTGGGTGCTTATTT 60.181 43.478 0.00 0.00 0.00 1.40
7586 9567 2.375174 TGGTCTCAACTGGGTGCTTATT 59.625 45.455 0.00 0.00 0.00 1.40
7587 9568 1.985159 TGGTCTCAACTGGGTGCTTAT 59.015 47.619 0.00 0.00 0.00 1.73
7588 9569 1.429930 TGGTCTCAACTGGGTGCTTA 58.570 50.000 0.00 0.00 0.00 3.09
7590 9571 0.773644 AATGGTCTCAACTGGGTGCT 59.226 50.000 0.00 0.00 0.00 4.40
7591 9572 1.168714 GAATGGTCTCAACTGGGTGC 58.831 55.000 0.00 0.00 0.00 5.01
7592 9573 2.867109 AGAATGGTCTCAACTGGGTG 57.133 50.000 0.00 0.00 0.00 4.61
7595 9576 5.180117 CACAAACTAGAATGGTCTCAACTGG 59.820 44.000 0.00 0.00 35.12 4.00
7596 9577 5.991606 TCACAAACTAGAATGGTCTCAACTG 59.008 40.000 0.00 0.00 35.12 3.16
7597 9578 6.174720 TCACAAACTAGAATGGTCTCAACT 57.825 37.500 0.00 0.00 35.12 3.16
7598 9579 6.861065 TTCACAAACTAGAATGGTCTCAAC 57.139 37.500 0.00 0.00 35.12 3.18
7599 9580 8.999431 GTATTTCACAAACTAGAATGGTCTCAA 58.001 33.333 0.00 0.00 35.12 3.02
7600 9581 8.154203 TGTATTTCACAAACTAGAATGGTCTCA 58.846 33.333 0.00 0.00 32.61 3.27
7601 9582 8.547967 TGTATTTCACAAACTAGAATGGTCTC 57.452 34.615 0.00 0.00 32.61 3.36
7602 9583 8.375506 TCTGTATTTCACAAACTAGAATGGTCT 58.624 33.333 0.00 0.00 36.48 3.85
7603 9584 8.547967 TCTGTATTTCACAAACTAGAATGGTC 57.452 34.615 0.00 0.00 36.48 4.02
7604 9585 8.784043 GTTCTGTATTTCACAAACTAGAATGGT 58.216 33.333 0.00 0.00 36.48 3.55
7605 9586 9.003658 AGTTCTGTATTTCACAAACTAGAATGG 57.996 33.333 0.00 0.00 37.04 3.16
7606 9587 9.817365 CAGTTCTGTATTTCACAAACTAGAATG 57.183 33.333 0.00 0.00 36.86 2.67
7607 9588 9.561069 ACAGTTCTGTATTTCACAAACTAGAAT 57.439 29.630 3.47 0.00 36.86 2.40
7608 9589 8.958119 ACAGTTCTGTATTTCACAAACTAGAA 57.042 30.769 3.47 0.00 36.86 2.10
7609 9590 9.472361 GTACAGTTCTGTATTTCACAAACTAGA 57.528 33.333 14.44 0.00 36.86 2.43
7610 9591 9.256477 TGTACAGTTCTGTATTTCACAAACTAG 57.744 33.333 14.44 0.00 36.86 2.57
7638 9619 1.133976 GTGCATGGCATTCTCCCTAGT 60.134 52.381 0.00 0.00 41.91 2.57
7639 9620 1.134007 TGTGCATGGCATTCTCCCTAG 60.134 52.381 0.00 0.00 41.91 3.02
7640 9621 0.918258 TGTGCATGGCATTCTCCCTA 59.082 50.000 0.00 0.00 41.91 3.53
7641 9622 0.260816 ATGTGCATGGCATTCTCCCT 59.739 50.000 0.00 0.00 41.91 4.20
7642 9623 0.387929 CATGTGCATGGCATTCTCCC 59.612 55.000 0.00 0.00 41.91 4.30
7643 9624 1.066605 GACATGTGCATGGCATTCTCC 59.933 52.381 12.73 0.00 46.06 3.71
7644 9625 2.486951 GACATGTGCATGGCATTCTC 57.513 50.000 12.73 0.00 46.06 2.87
7650 9631 1.996898 CACAATTGACATGTGCATGGC 59.003 47.619 13.59 13.34 46.95 4.40
7651 9632 3.579335 TCACAATTGACATGTGCATGG 57.421 42.857 13.59 0.00 46.05 3.66
7652 9633 7.489757 TCAATTATCACAATTGACATGTGCATG 59.510 33.333 13.59 10.31 46.05 4.06
7653 9634 7.548967 TCAATTATCACAATTGACATGTGCAT 58.451 30.769 13.59 0.00 46.05 3.96
7654 9635 6.921914 TCAATTATCACAATTGACATGTGCA 58.078 32.000 13.59 0.00 46.05 4.57
7655 9636 7.997107 ATCAATTATCACAATTGACATGTGC 57.003 32.000 13.59 0.00 45.86 4.57
7685 9666 8.863049 GCCTGATTATATTTTGTTTGTGAAGTG 58.137 33.333 0.00 0.00 0.00 3.16
7686 9667 8.806146 AGCCTGATTATATTTTGTTTGTGAAGT 58.194 29.630 0.00 0.00 0.00 3.01
7687 9668 9.643693 AAGCCTGATTATATTTTGTTTGTGAAG 57.356 29.630 0.00 0.00 0.00 3.02
7688 9669 9.421806 CAAGCCTGATTATATTTTGTTTGTGAA 57.578 29.630 0.00 0.00 0.00 3.18
7689 9670 8.584157 ACAAGCCTGATTATATTTTGTTTGTGA 58.416 29.630 0.00 0.00 0.00 3.58
7690 9671 8.761575 ACAAGCCTGATTATATTTTGTTTGTG 57.238 30.769 0.00 0.00 0.00 3.33
7691 9672 9.855021 GTACAAGCCTGATTATATTTTGTTTGT 57.145 29.630 0.00 0.00 0.00 2.83
7692 9673 9.301153 GGTACAAGCCTGATTATATTTTGTTTG 57.699 33.333 0.00 0.00 0.00 2.93
7693 9674 9.030452 TGGTACAAGCCTGATTATATTTTGTTT 57.970 29.630 0.00 0.00 31.92 2.83
7694 9675 8.588290 TGGTACAAGCCTGATTATATTTTGTT 57.412 30.769 0.00 0.00 31.92 2.83
7713 9694 6.433404 CCTCTCTAGTCTGTTAGTTTGGTACA 59.567 42.308 0.00 0.00 0.00 2.90
7714 9695 6.127675 CCCTCTCTAGTCTGTTAGTTTGGTAC 60.128 46.154 0.00 0.00 0.00 3.34
7715 9696 5.950549 CCCTCTCTAGTCTGTTAGTTTGGTA 59.049 44.000 0.00 0.00 0.00 3.25
7716 9697 4.773149 CCCTCTCTAGTCTGTTAGTTTGGT 59.227 45.833 0.00 0.00 0.00 3.67
7717 9698 4.382147 GCCCTCTCTAGTCTGTTAGTTTGG 60.382 50.000 0.00 0.00 0.00 3.28
7718 9699 4.220821 TGCCCTCTCTAGTCTGTTAGTTTG 59.779 45.833 0.00 0.00 0.00 2.93
7719 9700 4.417437 TGCCCTCTCTAGTCTGTTAGTTT 58.583 43.478 0.00 0.00 0.00 2.66
7720 9701 4.048970 TGCCCTCTCTAGTCTGTTAGTT 57.951 45.455 0.00 0.00 0.00 2.24
7721 9702 3.741245 TGCCCTCTCTAGTCTGTTAGT 57.259 47.619 0.00 0.00 0.00 2.24
7722 9703 5.172205 GTTTTGCCCTCTCTAGTCTGTTAG 58.828 45.833 0.00 0.00 0.00 2.34
7723 9704 4.591498 TGTTTTGCCCTCTCTAGTCTGTTA 59.409 41.667 0.00 0.00 0.00 2.41
7724 9705 3.391296 TGTTTTGCCCTCTCTAGTCTGTT 59.609 43.478 0.00 0.00 0.00 3.16
7725 9706 2.972713 TGTTTTGCCCTCTCTAGTCTGT 59.027 45.455 0.00 0.00 0.00 3.41
7726 9707 3.330267 GTGTTTTGCCCTCTCTAGTCTG 58.670 50.000 0.00 0.00 0.00 3.51
7727 9708 2.303311 GGTGTTTTGCCCTCTCTAGTCT 59.697 50.000 0.00 0.00 0.00 3.24
7728 9709 2.038557 TGGTGTTTTGCCCTCTCTAGTC 59.961 50.000 0.00 0.00 0.00 2.59
7843 9824 1.997874 GAGATGGACTGCAGGGGGT 60.998 63.158 19.93 0.00 0.00 4.95
7846 9848 0.617413 ACAAGAGATGGACTGCAGGG 59.383 55.000 19.93 0.00 0.00 4.45
7890 9892 3.674410 GCTAGCTGGTGCATTCCTTTTTC 60.674 47.826 7.70 0.00 42.74 2.29
7901 9904 2.391389 GGTTCGTGCTAGCTGGTGC 61.391 63.158 17.23 3.58 40.05 5.01
7902 9905 1.016130 CAGGTTCGTGCTAGCTGGTG 61.016 60.000 17.23 3.06 37.45 4.17
7904 9907 4.192000 CAGGTTCGTGCTAGCTGG 57.808 61.111 17.23 7.77 37.45 4.85
7905 9908 2.103042 GCCAGGTTCGTGCTAGCTG 61.103 63.158 17.23 8.75 40.03 4.24
7907 9910 1.811679 GAGCCAGGTTCGTGCTAGC 60.812 63.158 8.10 8.10 34.99 3.42
7908 9911 0.037326 TTGAGCCAGGTTCGTGCTAG 60.037 55.000 0.00 0.00 34.99 3.42
7909 9912 0.037326 CTTGAGCCAGGTTCGTGCTA 60.037 55.000 0.00 0.00 34.99 3.49
7910 9913 1.302033 CTTGAGCCAGGTTCGTGCT 60.302 57.895 0.00 0.00 38.24 4.40
7915 9918 2.772515 AGGGTATACTTGAGCCAGGTTC 59.227 50.000 2.25 0.00 36.90 3.62
7918 9931 3.933861 AAAGGGTATACTTGAGCCAGG 57.066 47.619 2.25 0.00 36.90 4.45
7941 9954 8.409358 AAAGAATAAACTGTTCATGGTAAGCT 57.591 30.769 0.00 0.00 0.00 3.74
7979 9992 4.564406 CCCATCCTCTGCATACTTATCCAC 60.564 50.000 0.00 0.00 0.00 4.02
7986 9999 2.859929 CCCCCATCCTCTGCATACT 58.140 57.895 0.00 0.00 0.00 2.12
8070 10083 3.822735 TCCAGCTTCTTTTCAAGGATGTG 59.177 43.478 0.00 0.00 0.00 3.21
8160 10173 1.753930 TGTATTGATGGCAGGCAGTG 58.246 50.000 1.89 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.