Multiple sequence alignment - TraesCS4A01G236900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G236900 chr4A 100.000 2948 0 0 1 2948 545763903 545760956 0.000000e+00 5445.0
1 TraesCS4A01G236900 chr4A 89.892 742 55 16 2 732 545785462 545786194 0.000000e+00 937.0
2 TraesCS4A01G236900 chr4A 95.930 172 7 0 1728 1899 545846469 545846640 2.240000e-71 279.0
3 TraesCS4A01G236900 chr4A 89.720 107 9 1 1898 2002 545848214 545848320 5.130000e-28 135.0
4 TraesCS4A01G236900 chr4D 90.263 1520 100 22 1104 2592 51011848 51013350 0.000000e+00 1943.0
5 TraesCS4A01G236900 chr4D 89.583 192 12 2 735 926 51007077 51007260 1.370000e-58 237.0
6 TraesCS4A01G236900 chr4D 91.156 147 7 2 968 1108 51007258 51007404 8.340000e-46 195.0
7 TraesCS4A01G236900 chr4D 92.157 51 1 1 1863 1913 51013361 51013408 5.270000e-08 69.4
8 TraesCS4A01G236900 chr4B 95.264 1098 39 8 959 2048 75124282 75125374 0.000000e+00 1727.0
9 TraesCS4A01G236900 chr4B 78.027 446 73 13 2296 2727 620238898 620239332 1.050000e-64 257.0
10 TraesCS4A01G236900 chr1D 80.228 526 89 7 2213 2727 107170128 107169607 5.960000e-102 381.0
11 TraesCS4A01G236900 chr3B 80.040 496 82 9 2227 2710 379340931 379340441 4.670000e-93 351.0
12 TraesCS4A01G236900 chr3B 86.471 170 18 5 2016 2184 9088649 9088484 6.490000e-42 182.0
13 TraesCS4A01G236900 chr3B 86.301 146 18 2 2040 2184 48966240 48966384 1.090000e-34 158.0
14 TraesCS4A01G236900 chr3D 81.757 148 23 3 1988 2134 28578272 28578416 1.440000e-23 121.0
15 TraesCS4A01G236900 chr5D 97.143 35 1 0 2129 2163 429591654 429591620 3.170000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G236900 chr4A 545760956 545763903 2947 True 5445.0 5445 100.000 1 2948 1 chr4A.!!$R1 2947
1 TraesCS4A01G236900 chr4A 545785462 545786194 732 False 937.0 937 89.892 2 732 1 chr4A.!!$F1 730
2 TraesCS4A01G236900 chr4A 545846469 545848320 1851 False 207.0 279 92.825 1728 2002 2 chr4A.!!$F2 274
3 TraesCS4A01G236900 chr4D 51011848 51013408 1560 False 1006.2 1943 91.210 1104 2592 2 chr4D.!!$F2 1488
4 TraesCS4A01G236900 chr4B 75124282 75125374 1092 False 1727.0 1727 95.264 959 2048 1 chr4B.!!$F1 1089
5 TraesCS4A01G236900 chr1D 107169607 107170128 521 True 381.0 381 80.228 2213 2727 1 chr1D.!!$R1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
804 813 0.043485 AGGAAGAGAACCCTCCCTCC 59.957 60.0 0.0 0.0 40.04 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2801 4437 0.031314 TTCAAGCAATCGCCGCAAAA 59.969 45.0 0.0 0.0 39.83 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 0.389391 CGGGATGAAGCGGAGTATGT 59.611 55.000 0.00 0.00 0.00 2.29
64 65 3.819564 AGCGGAGTATGTGAGCATTTA 57.180 42.857 0.00 0.00 36.58 1.40
65 66 4.137116 AGCGGAGTATGTGAGCATTTAA 57.863 40.909 0.00 0.00 36.58 1.52
67 68 3.248602 GCGGAGTATGTGAGCATTTAAGG 59.751 47.826 0.00 0.00 36.58 2.69
68 69 3.809832 CGGAGTATGTGAGCATTTAAGGG 59.190 47.826 0.00 0.00 36.58 3.95
76 77 0.395724 AGCATTTAAGGGAAGGCCGG 60.396 55.000 0.00 0.00 37.03 6.13
91 92 1.212455 GCCGGGCAAAAACAAGTTCG 61.212 55.000 15.62 0.00 0.00 3.95
107 108 0.821517 TTCGTACCTGGACGCATGAT 59.178 50.000 0.00 0.00 42.62 2.45
108 109 0.102300 TCGTACCTGGACGCATGATG 59.898 55.000 0.00 0.00 42.62 3.07
113 114 1.065199 ACCTGGACGCATGATGTGATT 60.065 47.619 13.60 0.00 0.00 2.57
133 136 4.797693 TTGTCTCACGCGAACATAAAAA 57.202 36.364 15.93 0.00 0.00 1.94
138 141 4.748102 TCTCACGCGAACATAAAAAGTCTT 59.252 37.500 15.93 0.00 0.00 3.01
139 142 4.768145 TCACGCGAACATAAAAAGTCTTG 58.232 39.130 15.93 0.00 0.00 3.02
162 165 5.007921 TGTGGTAAATGAATGATCATGCTCG 59.992 40.000 14.96 0.00 45.60 5.03
179 183 1.004560 CGGTGCATGACAGGAGTGT 60.005 57.895 0.00 0.00 40.71 3.55
186 190 1.278985 CATGACAGGAGTGTTAGCCCA 59.721 52.381 0.00 0.00 36.88 5.36
200 205 1.037030 AGCCCAACATGTATTGCCCG 61.037 55.000 0.00 0.00 0.00 6.13
202 207 0.455410 CCCAACATGTATTGCCCGTG 59.545 55.000 0.00 0.00 0.00 4.94
236 241 1.692411 GCCAGGGTTATCCAACATCC 58.308 55.000 0.00 0.00 36.29 3.51
242 247 1.064017 GGTTATCCAACATCCAGGGCA 60.064 52.381 0.00 0.00 36.29 5.36
287 292 2.564947 TGGCCCATGGTTCACATTAAAC 59.435 45.455 11.73 0.00 37.84 2.01
327 332 7.849804 ACTGAGAAAACATACACCATGATAC 57.150 36.000 0.00 0.00 38.10 2.24
336 341 6.223852 ACATACACCATGATACGAGAAATCC 58.776 40.000 0.00 0.00 38.10 3.01
343 348 4.713824 TGATACGAGAAATCCACGTCTT 57.286 40.909 0.00 0.00 40.61 3.01
345 350 5.817988 TGATACGAGAAATCCACGTCTTAG 58.182 41.667 0.00 0.00 40.61 2.18
393 398 2.778299 TCCAGAAACTCCCAATCAACG 58.222 47.619 0.00 0.00 0.00 4.10
394 399 1.200020 CCAGAAACTCCCAATCAACGC 59.800 52.381 0.00 0.00 0.00 4.84
395 400 1.135972 CAGAAACTCCCAATCAACGCG 60.136 52.381 3.53 3.53 0.00 6.01
396 401 0.168128 GAAACTCCCAATCAACGCGG 59.832 55.000 12.47 0.00 0.00 6.46
402 407 0.937304 CCCAATCAACGCGGTCATAG 59.063 55.000 12.47 0.00 0.00 2.23
413 418 1.936547 GCGGTCATAGGCTTTTGAGAG 59.063 52.381 0.00 0.00 0.00 3.20
418 423 4.054671 GTCATAGGCTTTTGAGAGATCCG 58.945 47.826 0.00 0.00 0.00 4.18
450 455 0.252284 AGAGTGTCGGGGGTCATCTT 60.252 55.000 0.00 0.00 0.00 2.40
458 463 1.679032 CGGGGGTCATCTTTCAAGGAC 60.679 57.143 0.00 0.00 0.00 3.85
472 478 8.553085 TCTTTCAAGGACCAGATATATGAAGA 57.447 34.615 0.00 0.00 0.00 2.87
488 494 5.954296 ATGAAGACACTCAGAATTTGTGG 57.046 39.130 0.00 0.00 36.16 4.17
501 507 6.013379 TCAGAATTTGTGGAAGTCTATGTCCT 60.013 38.462 0.00 0.00 40.47 3.85
502 508 6.656693 CAGAATTTGTGGAAGTCTATGTCCTT 59.343 38.462 0.00 0.00 40.47 3.36
503 509 7.824289 CAGAATTTGTGGAAGTCTATGTCCTTA 59.176 37.037 0.00 0.00 40.47 2.69
504 510 8.383175 AGAATTTGTGGAAGTCTATGTCCTTAA 58.617 33.333 0.00 0.00 40.63 1.85
519 525 3.311596 GTCCTTAATTACGATGCGCCTTT 59.688 43.478 4.18 0.00 0.00 3.11
545 551 1.302431 CCAGGTCCGACATGCACAA 60.302 57.895 7.68 0.00 0.00 3.33
548 554 0.973632 AGGTCCGACATGCACAAGTA 59.026 50.000 0.00 0.00 0.00 2.24
563 569 9.195411 CATGCACAAGTATGTCAAATAAAAACT 57.805 29.630 0.00 0.00 37.82 2.66
575 581 7.145323 GTCAAATAAAAACTACACACAGGCAT 58.855 34.615 0.00 0.00 0.00 4.40
576 582 8.293867 GTCAAATAAAAACTACACACAGGCATA 58.706 33.333 0.00 0.00 0.00 3.14
577 583 8.293867 TCAAATAAAAACTACACACAGGCATAC 58.706 33.333 0.00 0.00 0.00 2.39
598 605 2.171027 CCCCATGAACAAATTCCCCATG 59.829 50.000 0.00 0.00 33.49 3.66
601 608 4.164604 CCCATGAACAAATTCCCCATGAAT 59.835 41.667 0.00 0.00 45.75 2.57
612 619 1.548081 CCCATGAATGCACACCTTGA 58.452 50.000 0.00 0.00 0.00 3.02
667 674 8.767478 AAATTTGAGCAGTTGATTTCATTAGG 57.233 30.769 0.00 0.00 0.00 2.69
668 675 4.970662 TGAGCAGTTGATTTCATTAGGC 57.029 40.909 0.00 0.00 0.00 3.93
683 690 5.680619 TCATTAGGCGTGGTCTAATTGATT 58.319 37.500 0.00 0.00 38.23 2.57
693 700 7.064728 GCGTGGTCTAATTGATTCTTAACTTCT 59.935 37.037 0.00 0.00 0.00 2.85
706 715 5.497474 TCTTAACTTCTTACCATTGGAGGC 58.503 41.667 10.37 0.00 0.00 4.70
707 716 2.403252 ACTTCTTACCATTGGAGGCG 57.597 50.000 10.37 0.00 0.00 5.52
725 734 2.024414 GCGAGAGGGCCATGTTAAAAT 58.976 47.619 6.18 0.00 0.00 1.82
728 737 4.261197 GCGAGAGGGCCATGTTAAAATTAG 60.261 45.833 6.18 0.00 0.00 1.73
729 738 4.261197 CGAGAGGGCCATGTTAAAATTAGC 60.261 45.833 6.18 0.00 0.00 3.09
730 739 3.960755 AGAGGGCCATGTTAAAATTAGCC 59.039 43.478 6.18 7.64 38.21 3.93
731 740 3.704061 GAGGGCCATGTTAAAATTAGCCA 59.296 43.478 15.38 0.00 40.75 4.75
732 741 4.100373 AGGGCCATGTTAAAATTAGCCAA 58.900 39.130 15.38 0.00 40.75 4.52
733 742 4.081142 AGGGCCATGTTAAAATTAGCCAAC 60.081 41.667 15.38 2.97 40.75 3.77
734 743 4.081142 GGGCCATGTTAAAATTAGCCAACT 60.081 41.667 15.38 0.00 40.75 3.16
735 744 5.109210 GGCCATGTTAAAATTAGCCAACTC 58.891 41.667 10.44 0.00 38.79 3.01
736 745 5.337169 GGCCATGTTAAAATTAGCCAACTCA 60.337 40.000 10.44 0.00 38.79 3.41
737 746 6.162777 GCCATGTTAAAATTAGCCAACTCAA 58.837 36.000 0.00 0.00 0.00 3.02
738 747 6.311200 GCCATGTTAAAATTAGCCAACTCAAG 59.689 38.462 0.00 0.00 0.00 3.02
739 748 7.601856 CCATGTTAAAATTAGCCAACTCAAGA 58.398 34.615 0.00 0.00 0.00 3.02
740 749 7.756722 CCATGTTAAAATTAGCCAACTCAAGAG 59.243 37.037 0.00 0.00 0.00 2.85
741 750 8.514594 CATGTTAAAATTAGCCAACTCAAGAGA 58.485 33.333 3.73 0.00 0.00 3.10
742 751 8.635765 TGTTAAAATTAGCCAACTCAAGAGAT 57.364 30.769 3.73 0.00 0.00 2.75
743 752 8.730680 TGTTAAAATTAGCCAACTCAAGAGATC 58.269 33.333 3.73 0.00 0.00 2.75
744 753 6.428385 AAAATTAGCCAACTCAAGAGATCG 57.572 37.500 3.73 0.00 0.00 3.69
745 754 5.344743 AATTAGCCAACTCAAGAGATCGA 57.655 39.130 3.73 0.00 0.00 3.59
746 755 2.957491 AGCCAACTCAAGAGATCGAG 57.043 50.000 3.73 0.00 35.30 4.04
747 756 2.175202 AGCCAACTCAAGAGATCGAGT 58.825 47.619 3.73 0.00 44.30 4.18
788 797 5.888982 AAAATTAGGGATCGAGCTTAGGA 57.111 39.130 0.00 0.00 0.00 2.94
789 798 5.888982 AAATTAGGGATCGAGCTTAGGAA 57.111 39.130 0.00 0.00 0.00 3.36
790 799 5.476091 AATTAGGGATCGAGCTTAGGAAG 57.524 43.478 0.00 0.00 0.00 3.46
791 800 2.757894 AGGGATCGAGCTTAGGAAGA 57.242 50.000 0.00 0.00 0.00 2.87
792 801 2.593026 AGGGATCGAGCTTAGGAAGAG 58.407 52.381 0.00 0.00 0.00 2.85
793 802 2.175931 AGGGATCGAGCTTAGGAAGAGA 59.824 50.000 0.00 0.00 0.00 3.10
794 803 2.959707 GGGATCGAGCTTAGGAAGAGAA 59.040 50.000 0.00 0.00 0.00 2.87
795 804 3.243602 GGGATCGAGCTTAGGAAGAGAAC 60.244 52.174 0.00 0.00 0.00 3.01
796 805 3.243602 GGATCGAGCTTAGGAAGAGAACC 60.244 52.174 0.00 0.00 0.00 3.62
797 806 2.100989 TCGAGCTTAGGAAGAGAACCC 58.899 52.381 0.00 0.00 0.00 4.11
798 807 2.104170 CGAGCTTAGGAAGAGAACCCT 58.896 52.381 0.00 0.00 36.60 4.34
799 808 2.100087 CGAGCTTAGGAAGAGAACCCTC 59.900 54.545 0.00 0.00 39.72 4.30
800 809 2.432874 GAGCTTAGGAAGAGAACCCTCC 59.567 54.545 0.00 0.00 40.30 4.30
801 810 1.487142 GCTTAGGAAGAGAACCCTCCC 59.513 57.143 0.00 0.00 40.30 4.30
802 811 2.894864 GCTTAGGAAGAGAACCCTCCCT 60.895 54.545 0.00 0.00 40.30 4.20
803 812 2.850695 TAGGAAGAGAACCCTCCCTC 57.149 55.000 0.00 0.00 40.30 4.30
804 813 0.043485 AGGAAGAGAACCCTCCCTCC 59.957 60.000 0.00 0.00 40.04 4.30
805 814 1.331399 GGAAGAGAACCCTCCCTCCG 61.331 65.000 0.00 0.00 40.30 4.63
806 815 1.306226 AAGAGAACCCTCCCTCCGG 60.306 63.158 0.00 0.00 40.30 5.14
807 816 3.471806 GAGAACCCTCCCTCCGGC 61.472 72.222 0.00 0.00 33.30 6.13
832 841 3.868888 GCACGCTTGCCAAAAATAAAA 57.131 38.095 3.29 0.00 43.66 1.52
833 842 4.403015 GCACGCTTGCCAAAAATAAAAT 57.597 36.364 3.29 0.00 43.66 1.82
834 843 5.523013 GCACGCTTGCCAAAAATAAAATA 57.477 34.783 3.29 0.00 43.66 1.40
835 844 5.921429 GCACGCTTGCCAAAAATAAAATAA 58.079 33.333 3.29 0.00 43.66 1.40
836 845 6.366630 GCACGCTTGCCAAAAATAAAATAAA 58.633 32.000 3.29 0.00 43.66 1.40
837 846 6.853362 GCACGCTTGCCAAAAATAAAATAAAA 59.147 30.769 3.29 0.00 43.66 1.52
838 847 7.536964 GCACGCTTGCCAAAAATAAAATAAAAT 59.463 29.630 3.29 0.00 43.66 1.82
839 848 9.392021 CACGCTTGCCAAAAATAAAATAAAATT 57.608 25.926 0.00 0.00 0.00 1.82
840 849 9.958234 ACGCTTGCCAAAAATAAAATAAAATTT 57.042 22.222 0.00 0.00 0.00 1.82
857 866 9.511144 AATAAAATTTGAATACGTTTCGGATCC 57.489 29.630 0.00 0.00 26.45 3.36
858 867 4.789095 ATTTGAATACGTTTCGGATCCG 57.211 40.909 28.62 28.62 41.35 4.18
859 868 1.563111 TGAATACGTTTCGGATCCGC 58.437 50.000 29.62 14.54 39.59 5.54
860 869 1.135053 TGAATACGTTTCGGATCCGCA 60.135 47.619 29.62 17.14 39.59 5.69
861 870 1.257155 GAATACGTTTCGGATCCGCAC 59.743 52.381 29.62 24.39 39.59 5.34
862 871 0.173935 ATACGTTTCGGATCCGCACA 59.826 50.000 29.62 12.72 39.59 4.57
863 872 0.457166 TACGTTTCGGATCCGCACAG 60.457 55.000 29.62 22.02 39.59 3.66
864 873 1.445410 CGTTTCGGATCCGCACAGA 60.445 57.895 29.62 9.03 39.59 3.41
865 874 1.413767 CGTTTCGGATCCGCACAGAG 61.414 60.000 29.62 13.62 39.59 3.35
866 875 1.447838 TTTCGGATCCGCACAGAGC 60.448 57.895 29.62 0.00 39.59 4.09
867 876 2.166130 TTTCGGATCCGCACAGAGCA 62.166 55.000 29.62 6.54 46.13 4.26
868 877 2.835701 TTCGGATCCGCACAGAGCAC 62.836 60.000 29.62 0.00 46.13 4.40
869 878 2.887568 GGATCCGCACAGAGCACG 60.888 66.667 0.00 0.00 46.13 5.34
870 879 2.125912 GATCCGCACAGAGCACGT 60.126 61.111 0.00 0.00 46.13 4.49
871 880 1.138883 GATCCGCACAGAGCACGTA 59.861 57.895 0.00 0.00 46.13 3.57
872 881 0.249073 GATCCGCACAGAGCACGTAT 60.249 55.000 0.00 0.00 46.13 3.06
873 882 0.528466 ATCCGCACAGAGCACGTATG 60.528 55.000 0.00 0.00 46.13 2.39
874 883 2.167219 CCGCACAGAGCACGTATGG 61.167 63.158 0.00 0.00 46.13 2.74
875 884 2.167219 CGCACAGAGCACGTATGGG 61.167 63.158 0.00 0.00 46.13 4.00
876 885 1.079127 GCACAGAGCACGTATGGGT 60.079 57.895 0.00 0.00 44.79 4.51
877 886 0.174845 GCACAGAGCACGTATGGGTA 59.825 55.000 0.00 0.00 44.79 3.69
878 887 1.802880 GCACAGAGCACGTATGGGTAG 60.803 57.143 0.00 0.00 44.79 3.18
879 888 1.476891 CACAGAGCACGTATGGGTAGT 59.523 52.381 0.00 0.00 0.00 2.73
880 889 1.476891 ACAGAGCACGTATGGGTAGTG 59.523 52.381 0.00 0.00 38.77 2.74
881 890 1.476891 CAGAGCACGTATGGGTAGTGT 59.523 52.381 0.00 0.00 38.10 3.55
882 891 1.476891 AGAGCACGTATGGGTAGTGTG 59.523 52.381 0.00 0.00 38.10 3.82
883 892 1.203994 GAGCACGTATGGGTAGTGTGT 59.796 52.381 0.00 0.00 38.10 3.72
884 893 2.424601 GAGCACGTATGGGTAGTGTGTA 59.575 50.000 0.00 0.00 38.10 2.90
885 894 3.028850 AGCACGTATGGGTAGTGTGTAT 58.971 45.455 0.00 0.00 38.10 2.29
886 895 4.209538 AGCACGTATGGGTAGTGTGTATA 58.790 43.478 0.00 0.00 38.10 1.47
887 896 4.646040 AGCACGTATGGGTAGTGTGTATAA 59.354 41.667 0.00 0.00 38.10 0.98
888 897 5.127519 AGCACGTATGGGTAGTGTGTATAAA 59.872 40.000 0.00 0.00 38.10 1.40
889 898 5.811613 GCACGTATGGGTAGTGTGTATAAAA 59.188 40.000 0.00 0.00 38.10 1.52
890 899 6.480981 GCACGTATGGGTAGTGTGTATAAAAT 59.519 38.462 0.00 0.00 38.10 1.82
891 900 7.306983 GCACGTATGGGTAGTGTGTATAAAATC 60.307 40.741 0.00 0.00 38.10 2.17
892 901 7.924412 CACGTATGGGTAGTGTGTATAAAATCT 59.076 37.037 0.00 0.00 0.00 2.40
893 902 8.139989 ACGTATGGGTAGTGTGTATAAAATCTC 58.860 37.037 0.00 0.00 0.00 2.75
894 903 8.139350 CGTATGGGTAGTGTGTATAAAATCTCA 58.861 37.037 0.00 0.00 0.00 3.27
895 904 9.826574 GTATGGGTAGTGTGTATAAAATCTCAA 57.173 33.333 0.00 0.00 0.00 3.02
897 906 9.920946 ATGGGTAGTGTGTATAAAATCTCAAAT 57.079 29.630 0.00 0.00 0.00 2.32
898 907 9.391006 TGGGTAGTGTGTATAAAATCTCAAATC 57.609 33.333 0.00 0.00 0.00 2.17
899 908 9.391006 GGGTAGTGTGTATAAAATCTCAAATCA 57.609 33.333 0.00 0.00 0.00 2.57
906 915 9.760660 GTGTATAAAATCTCAAATCATATCGCC 57.239 33.333 0.00 0.00 0.00 5.54
907 916 9.500785 TGTATAAAATCTCAAATCATATCGCCA 57.499 29.630 0.00 0.00 0.00 5.69
908 917 9.979270 GTATAAAATCTCAAATCATATCGCCAG 57.021 33.333 0.00 0.00 0.00 4.85
909 918 5.954296 AAATCTCAAATCATATCGCCAGG 57.046 39.130 0.00 0.00 0.00 4.45
910 919 4.897509 ATCTCAAATCATATCGCCAGGA 57.102 40.909 0.00 0.00 0.00 3.86
911 920 4.687901 TCTCAAATCATATCGCCAGGAA 57.312 40.909 0.00 0.00 0.00 3.36
912 921 4.635223 TCTCAAATCATATCGCCAGGAAG 58.365 43.478 0.00 0.00 0.00 3.46
913 922 3.743521 TCAAATCATATCGCCAGGAAGG 58.256 45.455 0.00 0.00 41.84 3.46
914 923 3.136443 TCAAATCATATCGCCAGGAAGGT 59.864 43.478 0.00 0.00 40.61 3.50
915 924 4.346709 TCAAATCATATCGCCAGGAAGGTA 59.653 41.667 0.00 0.00 40.61 3.08
916 925 4.974645 AATCATATCGCCAGGAAGGTAA 57.025 40.909 0.00 0.00 40.61 2.85
917 926 4.974645 ATCATATCGCCAGGAAGGTAAA 57.025 40.909 0.00 0.00 40.61 2.01
918 927 4.067972 TCATATCGCCAGGAAGGTAAAC 57.932 45.455 0.00 0.00 40.61 2.01
919 928 2.994186 TATCGCCAGGAAGGTAAACC 57.006 50.000 0.00 0.00 40.61 3.27
935 944 7.169287 AGGTAAACCTCCTCTGATAGATACT 57.831 40.000 0.00 0.00 44.77 2.12
936 945 7.235804 AGGTAAACCTCCTCTGATAGATACTC 58.764 42.308 0.00 0.00 44.77 2.59
937 946 6.434965 GGTAAACCTCCTCTGATAGATACTCC 59.565 46.154 0.00 0.00 0.00 3.85
938 947 5.671463 AACCTCCTCTGATAGATACTCCA 57.329 43.478 0.00 0.00 0.00 3.86
939 948 4.993028 ACCTCCTCTGATAGATACTCCAC 58.007 47.826 0.00 0.00 0.00 4.02
940 949 4.006989 CCTCCTCTGATAGATACTCCACG 58.993 52.174 0.00 0.00 0.00 4.94
941 950 3.413327 TCCTCTGATAGATACTCCACGC 58.587 50.000 0.00 0.00 0.00 5.34
942 951 2.490115 CCTCTGATAGATACTCCACGCC 59.510 54.545 0.00 0.00 0.00 5.68
943 952 3.417101 CTCTGATAGATACTCCACGCCT 58.583 50.000 0.00 0.00 0.00 5.52
944 953 4.565861 CCTCTGATAGATACTCCACGCCTA 60.566 50.000 0.00 0.00 0.00 3.93
945 954 4.981812 TCTGATAGATACTCCACGCCTAA 58.018 43.478 0.00 0.00 0.00 2.69
946 955 5.382616 TCTGATAGATACTCCACGCCTAAA 58.617 41.667 0.00 0.00 0.00 1.85
947 956 5.473846 TCTGATAGATACTCCACGCCTAAAG 59.526 44.000 0.00 0.00 0.00 1.85
948 957 2.892784 AGATACTCCACGCCTAAAGC 57.107 50.000 0.00 0.00 38.52 3.51
949 958 2.108168 AGATACTCCACGCCTAAAGCA 58.892 47.619 0.00 0.00 44.04 3.91
950 959 2.159085 AGATACTCCACGCCTAAAGCAC 60.159 50.000 0.00 0.00 44.04 4.40
951 960 0.108992 TACTCCACGCCTAAAGCACG 60.109 55.000 0.00 0.00 44.04 5.34
952 961 1.374252 CTCCACGCCTAAAGCACGT 60.374 57.895 0.00 0.00 44.04 4.49
953 962 0.108992 CTCCACGCCTAAAGCACGTA 60.109 55.000 0.00 0.00 44.04 3.57
954 963 0.533491 TCCACGCCTAAAGCACGTAT 59.467 50.000 0.00 0.00 44.04 3.06
955 964 0.650512 CCACGCCTAAAGCACGTATG 59.349 55.000 0.00 0.00 44.04 2.39
956 965 1.635844 CACGCCTAAAGCACGTATGA 58.364 50.000 0.00 0.00 44.04 2.15
957 966 1.588404 CACGCCTAAAGCACGTATGAG 59.412 52.381 0.00 0.00 44.04 2.90
958 967 1.203994 ACGCCTAAAGCACGTATGAGT 59.796 47.619 0.00 0.00 44.04 3.41
959 968 2.424601 ACGCCTAAAGCACGTATGAGTA 59.575 45.455 0.00 0.00 44.04 2.59
960 969 3.043586 CGCCTAAAGCACGTATGAGTAG 58.956 50.000 0.00 0.00 44.04 2.57
961 970 3.488721 CGCCTAAAGCACGTATGAGTAGT 60.489 47.826 0.00 0.00 44.04 2.73
962 971 4.260907 CGCCTAAAGCACGTATGAGTAGTA 60.261 45.833 0.00 0.00 44.04 1.82
963 972 5.213675 GCCTAAAGCACGTATGAGTAGTAG 58.786 45.833 0.00 0.00 42.97 2.57
964 973 5.008415 GCCTAAAGCACGTATGAGTAGTAGA 59.992 44.000 0.00 0.00 42.97 2.59
973 982 5.992829 ACGTATGAGTAGTAGACATCTCAGG 59.007 44.000 10.76 6.85 39.69 3.86
978 987 5.666265 TGAGTAGTAGACATCTCAGGACCTA 59.334 44.000 0.00 0.00 33.77 3.08
985 994 2.234908 ACATCTCAGGACCTAGTTGCAC 59.765 50.000 0.00 0.00 0.00 4.57
991 1000 3.291101 GACCTAGTTGCACGCCGGA 62.291 63.158 5.05 0.00 0.00 5.14
1062 1077 4.083862 GTCGTGGAGGTCTGGGCC 62.084 72.222 0.00 0.00 0.00 5.80
1110 1125 0.033991 TCTCCGACCTCTTCAGGGAG 60.034 60.000 0.00 0.00 45.53 4.30
1114 1129 1.904032 GACCTCTTCAGGGAGCTGG 59.096 63.158 0.00 0.00 45.53 4.85
1412 1427 3.119096 GGACGAACGCTTCCTGGC 61.119 66.667 0.00 0.00 30.13 4.85
1487 1502 2.125753 GGCTCTCACCGAGTGCTG 60.126 66.667 15.31 0.00 45.07 4.41
1757 1772 3.793144 CGGCTTCCTTGCGCTGAC 61.793 66.667 9.73 0.00 34.47 3.51
1895 1911 1.979155 GGGTCAAGGAGCAAAGGGC 60.979 63.158 0.00 0.00 45.30 5.19
1944 3538 2.029110 CACTTCCAATGCATTCGGGTTT 60.029 45.455 20.70 8.26 0.00 3.27
2003 3601 3.236047 TGTTTCACTAGTAGACTGCCCA 58.764 45.455 3.59 0.00 0.00 5.36
2097 3701 6.381801 AGAAAAGATAAACTGCAACAATCGG 58.618 36.000 0.00 0.00 0.00 4.18
2134 3739 7.944729 ATCCACTTCACTTGCTATGTAATTT 57.055 32.000 0.00 0.00 0.00 1.82
2137 3742 7.023575 CCACTTCACTTGCTATGTAATTTGAC 58.976 38.462 0.00 0.00 0.00 3.18
2143 3748 7.762159 TCACTTGCTATGTAATTTGACGATGTA 59.238 33.333 0.00 0.00 0.00 2.29
2144 3749 8.551205 CACTTGCTATGTAATTTGACGATGTAT 58.449 33.333 0.00 0.00 0.00 2.29
2216 3841 6.729100 TGAAGTAAAGGATAGAGGAGGTTGAA 59.271 38.462 0.00 0.00 0.00 2.69
2236 3861 2.290745 GTGGATAGGGGAGGGGCT 59.709 66.667 0.00 0.00 0.00 5.19
2291 3916 1.946768 ACGCACAATACAAGCACAAGT 59.053 42.857 0.00 0.00 0.00 3.16
2294 3919 2.574322 CACAATACAAGCACAAGTCGC 58.426 47.619 0.00 0.00 0.00 5.19
2303 3928 1.734477 CACAAGTCGCGGAGGTCAG 60.734 63.158 6.13 0.00 0.00 3.51
2307 3932 2.753043 GTCGCGGAGGTCAGGGTA 60.753 66.667 6.13 0.00 0.00 3.69
2315 3940 1.685491 GGAGGTCAGGGTAGACGACAT 60.685 57.143 0.00 0.00 39.42 3.06
2321 3946 3.005897 GTCAGGGTAGACGACATATGCAT 59.994 47.826 3.79 3.79 0.00 3.96
2338 3963 7.975616 ACATATGCATTCCATTGTTTCAGTAAC 59.024 33.333 3.54 0.00 35.34 2.50
2344 3969 5.838531 TCCATTGTTTCAGTAACCGTTTT 57.161 34.783 0.00 0.00 35.81 2.43
2353 3978 1.133730 AGTAACCGTTTTGGCCCTTGA 60.134 47.619 0.00 0.00 43.94 3.02
2371 3996 0.322546 GAAAGTGGCGGATTGGGACT 60.323 55.000 0.00 0.00 0.00 3.85
2378 4003 1.144057 CGGATTGGGACTTCCTCCG 59.856 63.158 9.37 9.37 43.76 4.63
2405 4030 3.041946 AGCTAGATGGGGTGAGGTTAAG 58.958 50.000 0.00 0.00 0.00 1.85
2411 4036 0.035739 GGGGTGAGGTTAAGCAACGA 59.964 55.000 7.52 0.00 35.34 3.85
2415 4040 2.354805 GGTGAGGTTAAGCAACGAGGAT 60.355 50.000 7.52 0.00 35.34 3.24
2419 4044 1.659098 GGTTAAGCAACGAGGATGACG 59.341 52.381 0.00 0.00 35.34 4.35
2459 4084 1.188863 CCTTTGGGCCAATTCTCCAG 58.811 55.000 21.65 13.00 31.59 3.86
2460 4085 1.188863 CTTTGGGCCAATTCTCCAGG 58.811 55.000 21.65 0.00 31.59 4.45
2490 4115 8.047310 TCCCTATACAGAGAAATTTTCAAGACC 58.953 37.037 11.53 0.00 0.00 3.85
2575 4209 2.554032 AGTTGCGAGGAACCAAATTCTG 59.446 45.455 3.88 0.00 37.48 3.02
2597 4231 5.389520 TGGGTGGTAATCAAGTGATCAAAA 58.610 37.500 0.00 0.00 32.75 2.44
2599 4233 5.710099 GGGTGGTAATCAAGTGATCAAAAGA 59.290 40.000 0.00 0.00 32.75 2.52
2604 4238 7.867403 TGGTAATCAAGTGATCAAAAGAAAAGC 59.133 33.333 0.00 0.00 32.75 3.51
2611 4247 4.279420 GTGATCAAAAGAAAAGCCAGGAGT 59.721 41.667 0.00 0.00 0.00 3.85
2613 4249 2.878406 TCAAAAGAAAAGCCAGGAGTCG 59.122 45.455 0.00 0.00 0.00 4.18
2621 4257 2.743928 CCAGGAGTCGGCAAGTGC 60.744 66.667 0.00 0.00 41.14 4.40
2644 4280 2.307496 TGGTGTGCCCAAGATGAAAT 57.693 45.000 0.00 0.00 41.50 2.17
2648 4284 3.244181 GGTGTGCCCAAGATGAAATTTGT 60.244 43.478 0.00 0.00 0.00 2.83
2651 4287 3.989817 GTGCCCAAGATGAAATTTGTGAC 59.010 43.478 0.00 0.00 0.00 3.67
2660 4296 6.484288 AGATGAAATTTGTGACCATGTCCTA 58.516 36.000 0.00 0.00 0.00 2.94
2670 4306 4.449068 GTGACCATGTCCTATTTAGATGCG 59.551 45.833 0.00 0.00 0.00 4.73
2672 4308 5.036117 ACCATGTCCTATTTAGATGCGTT 57.964 39.130 0.00 0.00 0.00 4.84
2673 4309 4.816385 ACCATGTCCTATTTAGATGCGTTG 59.184 41.667 0.00 0.00 0.00 4.10
2675 4311 5.989168 CCATGTCCTATTTAGATGCGTTGTA 59.011 40.000 0.00 0.00 0.00 2.41
2677 4313 6.216801 TGTCCTATTTAGATGCGTTGTAGT 57.783 37.500 0.00 0.00 0.00 2.73
2681 4317 8.133627 GTCCTATTTAGATGCGTTGTAGTAAGA 58.866 37.037 0.00 0.00 0.00 2.10
2693 4329 6.478588 CGTTGTAGTAAGATTCATTTGGAGC 58.521 40.000 0.00 0.00 0.00 4.70
2696 4332 5.810587 TGTAGTAAGATTCATTTGGAGCGTC 59.189 40.000 0.00 0.00 0.00 5.19
2698 4334 4.631813 AGTAAGATTCATTTGGAGCGTCAC 59.368 41.667 0.00 0.00 0.00 3.67
2703 4339 1.899814 TCATTTGGAGCGTCACTAGGT 59.100 47.619 0.00 0.00 0.00 3.08
2710 4346 2.299521 GAGCGTCACTAGGTAGACCAT 58.700 52.381 0.66 0.00 38.89 3.55
2711 4347 2.025155 AGCGTCACTAGGTAGACCATG 58.975 52.381 0.66 0.00 38.89 3.66
2714 4350 1.413077 GTCACTAGGTAGACCATGGGC 59.587 57.143 18.09 14.76 38.89 5.36
2716 4352 2.516702 TCACTAGGTAGACCATGGGCTA 59.483 50.000 24.34 24.34 38.89 3.93
2719 4355 4.463186 CACTAGGTAGACCATGGGCTATAC 59.537 50.000 30.20 24.11 38.89 1.47
2727 4363 1.774254 CCATGGGCTATACCTGGAACA 59.226 52.381 2.85 0.00 39.10 3.18
2728 4364 2.487265 CCATGGGCTATACCTGGAACAC 60.487 54.545 2.85 0.00 39.10 3.32
2729 4365 1.209621 TGGGCTATACCTGGAACACC 58.790 55.000 0.00 0.00 39.10 4.16
2730 4366 1.209621 GGGCTATACCTGGAACACCA 58.790 55.000 0.00 0.00 39.10 4.17
2731 4367 1.774856 GGGCTATACCTGGAACACCAT 59.225 52.381 0.00 0.00 39.10 3.55
2732 4368 2.487265 GGGCTATACCTGGAACACCATG 60.487 54.545 0.00 0.00 39.10 3.66
2733 4369 2.487265 GGCTATACCTGGAACACCATGG 60.487 54.545 11.19 11.19 34.51 3.66
2734 4370 2.487265 GCTATACCTGGAACACCATGGG 60.487 54.545 18.09 7.72 32.90 4.00
2735 4371 0.926293 ATACCTGGAACACCATGGGG 59.074 55.000 14.08 14.08 41.29 4.96
2750 4386 4.754322 CCATGGGGTTTGCTAATTTACAC 58.246 43.478 2.85 0.00 0.00 2.90
2751 4387 4.382577 CCATGGGGTTTGCTAATTTACACC 60.383 45.833 2.85 0.00 34.59 4.16
2752 4388 3.845860 TGGGGTTTGCTAATTTACACCA 58.154 40.909 0.00 0.00 41.58 4.17
2753 4389 4.421131 TGGGGTTTGCTAATTTACACCAT 58.579 39.130 0.00 0.00 39.08 3.55
2754 4390 4.464597 TGGGGTTTGCTAATTTACACCATC 59.535 41.667 0.00 0.00 39.08 3.51
2755 4391 4.709886 GGGGTTTGCTAATTTACACCATCT 59.290 41.667 0.00 0.00 34.17 2.90
2756 4392 5.186992 GGGGTTTGCTAATTTACACCATCTT 59.813 40.000 0.00 0.00 34.17 2.40
2757 4393 6.330278 GGGTTTGCTAATTTACACCATCTTC 58.670 40.000 0.00 0.00 0.00 2.87
2758 4394 6.152831 GGGTTTGCTAATTTACACCATCTTCT 59.847 38.462 0.00 0.00 0.00 2.85
2759 4395 7.338449 GGGTTTGCTAATTTACACCATCTTCTA 59.662 37.037 0.00 0.00 0.00 2.10
2760 4396 8.736244 GGTTTGCTAATTTACACCATCTTCTAA 58.264 33.333 0.00 0.00 0.00 2.10
2780 4416 4.840545 GGGACCTGGGGAAGAGAT 57.159 61.111 0.00 0.00 0.00 2.75
2781 4417 3.970426 GGGACCTGGGGAAGAGATA 57.030 57.895 0.00 0.00 0.00 1.98
2782 4418 1.723288 GGGACCTGGGGAAGAGATAG 58.277 60.000 0.00 0.00 0.00 2.08
2783 4419 1.220750 GGGACCTGGGGAAGAGATAGA 59.779 57.143 0.00 0.00 0.00 1.98
2784 4420 2.321719 GGACCTGGGGAAGAGATAGAC 58.678 57.143 0.00 0.00 0.00 2.59
2785 4421 1.957877 GACCTGGGGAAGAGATAGACG 59.042 57.143 0.00 0.00 0.00 4.18
2786 4422 1.569548 ACCTGGGGAAGAGATAGACGA 59.430 52.381 0.00 0.00 0.00 4.20
2787 4423 2.024273 ACCTGGGGAAGAGATAGACGAA 60.024 50.000 0.00 0.00 0.00 3.85
2788 4424 3.235200 CCTGGGGAAGAGATAGACGAAT 58.765 50.000 0.00 0.00 0.00 3.34
2789 4425 4.140994 ACCTGGGGAAGAGATAGACGAATA 60.141 45.833 0.00 0.00 0.00 1.75
2790 4426 4.461081 CCTGGGGAAGAGATAGACGAATAG 59.539 50.000 0.00 0.00 0.00 1.73
2791 4427 5.063017 TGGGGAAGAGATAGACGAATAGT 57.937 43.478 0.00 0.00 0.00 2.12
2792 4428 5.455872 TGGGGAAGAGATAGACGAATAGTT 58.544 41.667 0.00 0.00 0.00 2.24
2793 4429 5.897824 TGGGGAAGAGATAGACGAATAGTTT 59.102 40.000 0.00 0.00 0.00 2.66
2794 4430 6.183360 TGGGGAAGAGATAGACGAATAGTTTG 60.183 42.308 0.00 0.00 0.00 2.93
2795 4431 6.217294 GGGAAGAGATAGACGAATAGTTTGG 58.783 44.000 0.00 0.00 0.00 3.28
2796 4432 6.040616 GGGAAGAGATAGACGAATAGTTTGGA 59.959 42.308 0.00 0.00 0.00 3.53
2797 4433 7.256012 GGGAAGAGATAGACGAATAGTTTGGAT 60.256 40.741 0.00 0.00 0.00 3.41
2798 4434 8.145122 GGAAGAGATAGACGAATAGTTTGGATT 58.855 37.037 0.00 0.00 0.00 3.01
2799 4435 8.879342 AAGAGATAGACGAATAGTTTGGATTG 57.121 34.615 0.00 0.00 0.00 2.67
2800 4436 8.239038 AGAGATAGACGAATAGTTTGGATTGA 57.761 34.615 0.00 0.00 0.00 2.57
2801 4437 8.865090 AGAGATAGACGAATAGTTTGGATTGAT 58.135 33.333 0.00 0.00 0.00 2.57
2802 4438 9.482627 GAGATAGACGAATAGTTTGGATTGATT 57.517 33.333 0.00 0.00 0.00 2.57
2803 4439 9.838339 AGATAGACGAATAGTTTGGATTGATTT 57.162 29.630 0.00 0.00 0.00 2.17
2806 4442 7.029563 AGACGAATAGTTTGGATTGATTTTGC 58.970 34.615 0.00 0.00 0.00 3.68
2807 4443 5.799936 ACGAATAGTTTGGATTGATTTTGCG 59.200 36.000 0.00 0.00 0.00 4.85
2808 4444 5.229887 CGAATAGTTTGGATTGATTTTGCGG 59.770 40.000 0.00 0.00 0.00 5.69
2809 4445 2.687370 AGTTTGGATTGATTTTGCGGC 58.313 42.857 0.00 0.00 0.00 6.53
2810 4446 1.389784 GTTTGGATTGATTTTGCGGCG 59.610 47.619 0.51 0.51 0.00 6.46
2811 4447 0.884514 TTGGATTGATTTTGCGGCGA 59.115 45.000 12.98 0.00 0.00 5.54
2812 4448 1.102154 TGGATTGATTTTGCGGCGAT 58.898 45.000 12.98 0.00 0.00 4.58
2813 4449 1.476085 TGGATTGATTTTGCGGCGATT 59.524 42.857 12.98 0.00 0.00 3.34
2814 4450 1.854126 GGATTGATTTTGCGGCGATTG 59.146 47.619 12.98 0.00 0.00 2.67
2815 4451 1.256117 GATTGATTTTGCGGCGATTGC 59.744 47.619 12.98 0.00 41.71 3.56
2816 4452 0.243365 TTGATTTTGCGGCGATTGCT 59.757 45.000 12.98 0.00 42.25 3.91
2817 4453 0.243365 TGATTTTGCGGCGATTGCTT 59.757 45.000 12.98 0.00 42.25 3.91
2818 4454 0.641783 GATTTTGCGGCGATTGCTTG 59.358 50.000 12.98 0.00 42.25 4.01
2819 4455 0.243365 ATTTTGCGGCGATTGCTTGA 59.757 45.000 12.98 0.00 42.25 3.02
2820 4456 0.031314 TTTTGCGGCGATTGCTTGAA 59.969 45.000 12.98 0.00 42.25 2.69
2821 4457 0.662970 TTTGCGGCGATTGCTTGAAC 60.663 50.000 12.98 0.00 42.25 3.18
2822 4458 2.202479 GCGGCGATTGCTTGAACC 60.202 61.111 12.98 0.00 42.25 3.62
2823 4459 2.690778 GCGGCGATTGCTTGAACCT 61.691 57.895 12.98 0.00 42.25 3.50
2824 4460 1.875963 CGGCGATTGCTTGAACCTT 59.124 52.632 0.00 0.00 42.25 3.50
2825 4461 0.454957 CGGCGATTGCTTGAACCTTG 60.455 55.000 0.00 0.00 42.25 3.61
2826 4462 0.598065 GGCGATTGCTTGAACCTTGT 59.402 50.000 4.59 0.00 42.25 3.16
2827 4463 1.666888 GGCGATTGCTTGAACCTTGTG 60.667 52.381 4.59 0.00 42.25 3.33
2828 4464 1.666888 GCGATTGCTTGAACCTTGTGG 60.667 52.381 0.00 0.00 38.39 4.17
2829 4465 1.879380 CGATTGCTTGAACCTTGTGGA 59.121 47.619 0.00 0.00 37.04 4.02
2830 4466 2.350772 CGATTGCTTGAACCTTGTGGAC 60.351 50.000 0.00 0.00 37.04 4.02
2831 4467 1.021202 TTGCTTGAACCTTGTGGACG 58.979 50.000 0.00 0.00 37.04 4.79
2832 4468 0.179234 TGCTTGAACCTTGTGGACGA 59.821 50.000 0.00 0.00 37.04 4.20
2833 4469 0.586802 GCTTGAACCTTGTGGACGAC 59.413 55.000 0.00 0.00 37.04 4.34
2834 4470 1.226746 CTTGAACCTTGTGGACGACC 58.773 55.000 0.00 0.00 37.04 4.79
2835 4471 0.179040 TTGAACCTTGTGGACGACCC 60.179 55.000 0.34 0.00 37.04 4.46
2836 4472 1.666872 GAACCTTGTGGACGACCCG 60.667 63.158 0.34 0.00 37.93 5.28
2837 4473 3.819877 AACCTTGTGGACGACCCGC 62.820 63.158 0.34 3.38 45.67 6.13
2842 4478 4.651008 GTGGACGACCCGCGACAA 62.651 66.667 8.23 0.00 44.57 3.18
2843 4479 3.914117 TGGACGACCCGCGACAAA 61.914 61.111 8.23 0.00 44.57 2.83
2844 4480 2.433664 GGACGACCCGCGACAAAT 60.434 61.111 8.23 0.00 44.57 2.32
2845 4481 2.450345 GGACGACCCGCGACAAATC 61.450 63.158 8.23 0.00 44.57 2.17
2846 4482 1.445582 GACGACCCGCGACAAATCT 60.446 57.895 8.23 0.00 44.57 2.40
2847 4483 1.005394 ACGACCCGCGACAAATCTT 60.005 52.632 8.23 0.00 44.57 2.40
2848 4484 0.601841 ACGACCCGCGACAAATCTTT 60.602 50.000 8.23 0.00 44.57 2.52
2849 4485 1.337074 ACGACCCGCGACAAATCTTTA 60.337 47.619 8.23 0.00 44.57 1.85
2850 4486 1.727880 CGACCCGCGACAAATCTTTAA 59.272 47.619 8.23 0.00 44.57 1.52
2851 4487 2.350498 CGACCCGCGACAAATCTTTAAT 59.650 45.455 8.23 0.00 44.57 1.40
2852 4488 3.552699 CGACCCGCGACAAATCTTTAATA 59.447 43.478 8.23 0.00 44.57 0.98
2853 4489 4.317839 CGACCCGCGACAAATCTTTAATAG 60.318 45.833 8.23 0.00 44.57 1.73
2854 4490 4.761975 ACCCGCGACAAATCTTTAATAGA 58.238 39.130 8.23 0.00 37.28 1.98
2855 4491 4.809426 ACCCGCGACAAATCTTTAATAGAG 59.191 41.667 8.23 0.00 36.02 2.43
2856 4492 4.211374 CCCGCGACAAATCTTTAATAGAGG 59.789 45.833 8.23 0.00 36.02 3.69
2857 4493 4.211374 CCGCGACAAATCTTTAATAGAGGG 59.789 45.833 8.23 0.00 36.02 4.30
2858 4494 5.047847 CGCGACAAATCTTTAATAGAGGGA 58.952 41.667 0.00 0.00 36.02 4.20
2859 4495 5.696724 CGCGACAAATCTTTAATAGAGGGAT 59.303 40.000 0.00 0.00 36.02 3.85
2860 4496 6.346919 CGCGACAAATCTTTAATAGAGGGATG 60.347 42.308 0.00 0.00 36.02 3.51
2861 4497 6.706270 GCGACAAATCTTTAATAGAGGGATGA 59.294 38.462 0.00 0.00 36.02 2.92
2862 4498 7.389053 GCGACAAATCTTTAATAGAGGGATGAT 59.611 37.037 0.00 0.00 36.02 2.45
2863 4499 9.929180 CGACAAATCTTTAATAGAGGGATGATA 57.071 33.333 0.00 0.00 36.02 2.15
2877 4513 8.651589 AGAGGGATGATATATAAAACACTCGA 57.348 34.615 0.00 0.00 0.00 4.04
2878 4514 8.524487 AGAGGGATGATATATAAAACACTCGAC 58.476 37.037 0.00 0.00 0.00 4.20
2879 4515 8.423906 AGGGATGATATATAAAACACTCGACT 57.576 34.615 0.00 0.00 0.00 4.18
2880 4516 9.529823 AGGGATGATATATAAAACACTCGACTA 57.470 33.333 0.00 0.00 0.00 2.59
2884 4520 9.622004 ATGATATATAAAACACTCGACTAACCG 57.378 33.333 0.00 0.00 0.00 4.44
2885 4521 8.839343 TGATATATAAAACACTCGACTAACCGA 58.161 33.333 0.00 0.00 37.03 4.69
2895 4531 4.566545 TCGACTAACCGAGTGTACAAAA 57.433 40.909 0.00 0.00 39.06 2.44
2896 4532 5.125100 TCGACTAACCGAGTGTACAAAAT 57.875 39.130 0.00 0.00 39.06 1.82
2897 4533 5.531634 TCGACTAACCGAGTGTACAAAATT 58.468 37.500 0.00 0.00 39.06 1.82
2898 4534 5.984926 TCGACTAACCGAGTGTACAAAATTT 59.015 36.000 0.00 0.00 39.06 1.82
2899 4535 6.479660 TCGACTAACCGAGTGTACAAAATTTT 59.520 34.615 0.00 0.00 39.06 1.82
2900 4536 6.572254 CGACTAACCGAGTGTACAAAATTTTG 59.428 38.462 25.73 25.73 39.06 2.44
2901 4537 7.324354 ACTAACCGAGTGTACAAAATTTTGT 57.676 32.000 32.63 32.63 44.63 2.83
2902 4538 7.764331 ACTAACCGAGTGTACAAAATTTTGTT 58.236 30.769 34.51 20.70 42.02 2.83
2903 4539 8.245491 ACTAACCGAGTGTACAAAATTTTGTTT 58.755 29.630 34.51 23.45 42.02 2.83
2921 4557 8.994429 TTTTGTTTCTGTTGCTATTTTGAAGA 57.006 26.923 0.00 0.00 0.00 2.87
2922 4558 8.633075 TTTGTTTCTGTTGCTATTTTGAAGAG 57.367 30.769 0.00 0.00 0.00 2.85
2923 4559 6.208644 TGTTTCTGTTGCTATTTTGAAGAGC 58.791 36.000 0.64 0.64 36.72 4.09
2924 4560 4.668576 TCTGTTGCTATTTTGAAGAGCG 57.331 40.909 3.27 0.00 39.14 5.03
2925 4561 3.120199 TCTGTTGCTATTTTGAAGAGCGC 60.120 43.478 0.00 0.00 39.14 5.92
2926 4562 2.813754 TGTTGCTATTTTGAAGAGCGCT 59.186 40.909 11.27 11.27 39.14 5.92
2927 4563 3.120199 TGTTGCTATTTTGAAGAGCGCTC 60.120 43.478 30.01 30.01 39.14 5.03
2928 4564 1.660607 TGCTATTTTGAAGAGCGCTCG 59.339 47.619 30.39 14.57 39.14 5.03
2929 4565 1.004504 GCTATTTTGAAGAGCGCTCGG 60.005 52.381 30.39 13.88 34.09 4.63
2930 4566 2.540515 CTATTTTGAAGAGCGCTCGGA 58.459 47.619 30.39 16.10 34.09 4.55
2931 4567 1.808411 ATTTTGAAGAGCGCTCGGAA 58.192 45.000 30.39 20.72 34.09 4.30
2932 4568 1.588674 TTTTGAAGAGCGCTCGGAAA 58.411 45.000 30.39 24.65 34.09 3.13
2933 4569 1.588674 TTTGAAGAGCGCTCGGAAAA 58.411 45.000 30.39 25.57 34.09 2.29
2934 4570 0.865769 TTGAAGAGCGCTCGGAAAAC 59.134 50.000 30.39 18.42 34.09 2.43
2935 4571 0.249699 TGAAGAGCGCTCGGAAAACA 60.250 50.000 30.39 20.47 34.09 2.83
2936 4572 0.440371 GAAGAGCGCTCGGAAAACAG 59.560 55.000 30.39 0.00 34.09 3.16
2937 4573 1.569479 AAGAGCGCTCGGAAAACAGC 61.569 55.000 30.39 4.43 34.09 4.40
2938 4574 2.280797 AGCGCTCGGAAAACAGCA 60.281 55.556 2.64 0.00 35.15 4.41
2939 4575 2.174349 GCGCTCGGAAAACAGCAG 59.826 61.111 0.00 0.00 35.15 4.24
2940 4576 2.863153 CGCTCGGAAAACAGCAGG 59.137 61.111 0.00 0.00 35.15 4.85
2941 4577 1.667830 CGCTCGGAAAACAGCAGGA 60.668 57.895 0.00 0.00 35.15 3.86
2942 4578 1.869690 GCTCGGAAAACAGCAGGAC 59.130 57.895 0.00 0.00 35.56 3.85
2943 4579 0.603975 GCTCGGAAAACAGCAGGACT 60.604 55.000 0.00 0.00 35.56 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.279271 GTAAGCACAGATCAGGTGGGT 59.721 52.381 16.35 3.80 36.76 4.51
55 56 1.681780 CGGCCTTCCCTTAAATGCTCA 60.682 52.381 0.00 0.00 0.00 4.26
64 65 2.956077 TTTTTGCCCGGCCTTCCCTT 62.956 55.000 7.03 0.00 0.00 3.95
65 66 3.460478 TTTTTGCCCGGCCTTCCCT 62.460 57.895 7.03 0.00 0.00 4.20
67 68 2.034048 TTGTTTTTGCCCGGCCTTCC 62.034 55.000 7.03 0.00 0.00 3.46
68 69 0.599991 CTTGTTTTTGCCCGGCCTTC 60.600 55.000 7.03 0.00 0.00 3.46
76 77 3.368495 CAGGTACGAACTTGTTTTTGCC 58.632 45.455 0.00 0.00 0.00 4.52
91 92 1.134818 TCACATCATGCGTCCAGGTAC 60.135 52.381 0.00 0.00 0.00 3.34
113 114 3.805422 ACTTTTTATGTTCGCGTGAGACA 59.195 39.130 5.77 13.63 0.00 3.41
123 124 9.959749 TCATTTACCACAAGACTTTTTATGTTC 57.040 29.630 0.00 0.00 0.00 3.18
133 136 7.415989 GCATGATCATTCATTTACCACAAGACT 60.416 37.037 5.16 0.00 40.70 3.24
138 141 5.007921 CGAGCATGATCATTCATTTACCACA 59.992 40.000 12.15 0.00 40.70 4.17
139 142 5.446709 CGAGCATGATCATTCATTTACCAC 58.553 41.667 12.15 0.00 40.70 4.16
162 165 2.350522 CTAACACTCCTGTCATGCACC 58.649 52.381 0.00 0.00 0.00 5.01
179 183 2.383855 GGGCAATACATGTTGGGCTAA 58.616 47.619 2.30 0.00 0.00 3.09
186 190 1.004277 AGGACACGGGCAATACATGTT 59.996 47.619 2.30 0.00 0.00 2.71
200 205 2.626780 GCCGGCCAAAGAAGGACAC 61.627 63.158 18.11 0.00 35.99 3.67
202 207 3.062466 GGCCGGCCAAAGAAGGAC 61.062 66.667 40.73 8.62 35.81 3.85
224 229 3.686227 ATTGCCCTGGATGTTGGATAA 57.314 42.857 0.00 0.00 0.00 1.75
227 232 2.173356 CTCTATTGCCCTGGATGTTGGA 59.827 50.000 0.00 0.00 0.00 3.53
236 241 0.179034 GGTCAGCCTCTATTGCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
264 269 1.196911 AATGTGAACCATGGGCCATG 58.803 50.000 34.76 34.76 41.10 3.66
305 310 6.635755 TCGTATCATGGTGTATGTTTTCTCA 58.364 36.000 0.00 0.00 38.01 3.27
309 314 7.915293 TTTCTCGTATCATGGTGTATGTTTT 57.085 32.000 0.00 0.00 38.01 2.43
327 332 4.617808 TCTCTAAGACGTGGATTTCTCG 57.382 45.455 0.00 0.00 0.00 4.04
336 341 3.026630 TGTGGCTTTCTCTAAGACGTG 57.973 47.619 0.00 0.00 45.57 4.49
343 348 4.019792 TGCTCAAATGTGGCTTTCTCTA 57.980 40.909 0.00 0.00 0.00 2.43
345 350 3.005155 ACTTGCTCAAATGTGGCTTTCTC 59.995 43.478 0.00 0.00 0.00 2.87
393 398 1.936547 CTCTCAAAAGCCTATGACCGC 59.063 52.381 0.00 0.00 0.00 5.68
394 399 3.526931 TCTCTCAAAAGCCTATGACCG 57.473 47.619 0.00 0.00 0.00 4.79
395 400 4.384940 GGATCTCTCAAAAGCCTATGACC 58.615 47.826 0.00 0.00 0.00 4.02
396 401 4.054671 CGGATCTCTCAAAAGCCTATGAC 58.945 47.826 0.00 0.00 0.00 3.06
402 407 3.691609 ACAAATCGGATCTCTCAAAAGCC 59.308 43.478 0.00 0.00 0.00 4.35
413 418 2.535984 CTCTGTGCGTACAAATCGGATC 59.464 50.000 7.96 0.00 36.14 3.36
418 423 2.090658 CGACACTCTGTGCGTACAAATC 59.909 50.000 7.96 0.61 36.98 2.17
450 455 7.345653 AGTGTCTTCATATATCTGGTCCTTGAA 59.654 37.037 0.00 0.00 0.00 2.69
458 463 9.775854 AAATTCTGAGTGTCTTCATATATCTGG 57.224 33.333 0.00 0.00 0.00 3.86
472 478 5.041191 AGACTTCCACAAATTCTGAGTGT 57.959 39.130 0.00 0.00 0.00 3.55
488 494 7.148950 CGCATCGTAATTAAGGACATAGACTTC 60.149 40.741 0.00 0.00 0.00 3.01
501 507 5.277154 GCTCTTAAAGGCGCATCGTAATTAA 60.277 40.000 10.83 2.51 0.00 1.40
502 508 4.210537 GCTCTTAAAGGCGCATCGTAATTA 59.789 41.667 10.83 0.00 0.00 1.40
503 509 3.002348 GCTCTTAAAGGCGCATCGTAATT 59.998 43.478 10.83 0.00 0.00 1.40
504 510 2.544267 GCTCTTAAAGGCGCATCGTAAT 59.456 45.455 10.83 0.00 0.00 1.89
519 525 2.361992 TCGGACCTGGCGCTCTTA 60.362 61.111 7.64 0.00 0.00 2.10
548 554 7.145323 GCCTGTGTGTAGTTTTTATTTGACAT 58.855 34.615 0.00 0.00 0.00 3.06
557 563 3.824443 GGGTATGCCTGTGTGTAGTTTTT 59.176 43.478 0.00 0.00 34.45 1.94
563 569 1.211703 CATGGGGTATGCCTGTGTGTA 59.788 52.381 0.00 0.00 34.45 2.90
575 581 2.383683 TGGGGAATTTGTTCATGGGGTA 59.616 45.455 0.00 0.00 0.00 3.69
576 582 1.150986 TGGGGAATTTGTTCATGGGGT 59.849 47.619 0.00 0.00 0.00 4.95
577 583 1.949799 TGGGGAATTTGTTCATGGGG 58.050 50.000 0.00 0.00 0.00 4.96
598 605 5.989551 ATTTTGTTTCAAGGTGTGCATTC 57.010 34.783 0.00 0.00 0.00 2.67
601 608 5.592282 TCTCTATTTTGTTTCAAGGTGTGCA 59.408 36.000 0.00 0.00 0.00 4.57
647 654 3.374988 CGCCTAATGAAATCAACTGCTCA 59.625 43.478 0.00 0.00 0.00 4.26
652 659 3.686016 ACCACGCCTAATGAAATCAACT 58.314 40.909 0.00 0.00 0.00 3.16
660 667 4.746535 TCAATTAGACCACGCCTAATGA 57.253 40.909 0.00 0.00 37.04 2.57
661 668 5.760253 AGAATCAATTAGACCACGCCTAATG 59.240 40.000 0.00 0.00 37.04 1.90
662 669 5.930135 AGAATCAATTAGACCACGCCTAAT 58.070 37.500 0.00 0.00 38.17 1.73
664 671 5.353394 AAGAATCAATTAGACCACGCCTA 57.647 39.130 0.00 0.00 0.00 3.93
665 672 3.914426 AGAATCAATTAGACCACGCCT 57.086 42.857 0.00 0.00 0.00 5.52
666 673 5.585047 AGTTAAGAATCAATTAGACCACGCC 59.415 40.000 0.00 0.00 0.00 5.68
667 674 6.663944 AGTTAAGAATCAATTAGACCACGC 57.336 37.500 0.00 0.00 0.00 5.34
668 675 8.480643 AGAAGTTAAGAATCAATTAGACCACG 57.519 34.615 0.00 0.00 0.00 4.94
683 690 5.497474 GCCTCCAATGGTAAGAAGTTAAGA 58.503 41.667 0.00 0.00 0.00 2.10
693 700 0.830648 CCTCTCGCCTCCAATGGTAA 59.169 55.000 0.00 0.00 0.00 2.85
706 715 4.261197 GCTAATTTTAACATGGCCCTCTCG 60.261 45.833 0.00 0.00 0.00 4.04
707 716 4.038042 GGCTAATTTTAACATGGCCCTCTC 59.962 45.833 0.00 0.00 32.86 3.20
725 734 3.764434 ACTCGATCTCTTGAGTTGGCTAA 59.236 43.478 0.00 0.00 42.48 3.09
728 737 2.663826 ACTCGATCTCTTGAGTTGGC 57.336 50.000 0.00 0.00 42.48 4.52
765 774 6.248569 TCCTAAGCTCGATCCCTAATTTTT 57.751 37.500 0.00 0.00 0.00 1.94
766 775 5.888982 TCCTAAGCTCGATCCCTAATTTT 57.111 39.130 0.00 0.00 0.00 1.82
767 776 5.602978 TCTTCCTAAGCTCGATCCCTAATTT 59.397 40.000 0.00 0.00 0.00 1.82
768 777 5.148502 TCTTCCTAAGCTCGATCCCTAATT 58.851 41.667 0.00 0.00 0.00 1.40
769 778 4.742012 TCTTCCTAAGCTCGATCCCTAAT 58.258 43.478 0.00 0.00 0.00 1.73
770 779 4.141228 TCTCTTCCTAAGCTCGATCCCTAA 60.141 45.833 0.00 0.00 0.00 2.69
771 780 3.394940 TCTCTTCCTAAGCTCGATCCCTA 59.605 47.826 0.00 0.00 0.00 3.53
772 781 2.175931 TCTCTTCCTAAGCTCGATCCCT 59.824 50.000 0.00 0.00 0.00 4.20
773 782 2.588620 TCTCTTCCTAAGCTCGATCCC 58.411 52.381 0.00 0.00 0.00 3.85
774 783 3.243602 GGTTCTCTTCCTAAGCTCGATCC 60.244 52.174 0.00 0.00 0.00 3.36
775 784 3.243602 GGGTTCTCTTCCTAAGCTCGATC 60.244 52.174 0.00 0.00 0.00 3.69
776 785 2.696187 GGGTTCTCTTCCTAAGCTCGAT 59.304 50.000 0.00 0.00 0.00 3.59
777 786 2.100989 GGGTTCTCTTCCTAAGCTCGA 58.899 52.381 0.00 0.00 0.00 4.04
778 787 2.100087 GAGGGTTCTCTTCCTAAGCTCG 59.900 54.545 0.00 0.00 37.07 5.03
779 788 2.432874 GGAGGGTTCTCTTCCTAAGCTC 59.567 54.545 0.00 0.00 39.86 4.09
780 789 2.473070 GGAGGGTTCTCTTCCTAAGCT 58.527 52.381 0.00 0.00 39.86 3.74
781 790 1.487142 GGGAGGGTTCTCTTCCTAAGC 59.513 57.143 0.00 0.00 39.86 3.09
782 791 3.035363 GAGGGAGGGTTCTCTTCCTAAG 58.965 54.545 0.00 0.00 39.86 2.18
783 792 2.292984 GGAGGGAGGGTTCTCTTCCTAA 60.293 54.545 0.00 0.00 38.97 2.69
784 793 1.291335 GGAGGGAGGGTTCTCTTCCTA 59.709 57.143 0.00 0.00 38.97 2.94
785 794 0.043485 GGAGGGAGGGTTCTCTTCCT 59.957 60.000 0.00 0.00 38.97 3.36
786 795 1.331399 CGGAGGGAGGGTTCTCTTCC 61.331 65.000 0.00 0.00 39.86 3.46
787 796 2.203806 CGGAGGGAGGGTTCTCTTC 58.796 63.158 0.00 0.00 39.86 2.87
788 797 4.463043 CGGAGGGAGGGTTCTCTT 57.537 61.111 0.00 0.00 39.86 2.85
813 822 8.947304 ATTTTATTTTATTTTTGGCAAGCGTG 57.053 26.923 0.00 0.00 0.00 5.34
814 823 9.958234 AAATTTTATTTTATTTTTGGCAAGCGT 57.042 22.222 0.00 0.00 0.00 5.07
831 840 9.511144 GGATCCGAAACGTATTCAAATTTTATT 57.489 29.630 0.00 0.00 0.00 1.40
832 841 7.853929 CGGATCCGAAACGTATTCAAATTTTAT 59.146 33.333 30.62 0.00 42.83 1.40
833 842 7.181418 CGGATCCGAAACGTATTCAAATTTTA 58.819 34.615 30.62 0.00 42.83 1.52
834 843 6.025280 CGGATCCGAAACGTATTCAAATTTT 58.975 36.000 30.62 0.00 42.83 1.82
835 844 5.565695 CGGATCCGAAACGTATTCAAATTT 58.434 37.500 30.62 0.00 42.83 1.82
836 845 4.495184 GCGGATCCGAAACGTATTCAAATT 60.495 41.667 37.64 0.00 42.83 1.82
837 846 3.001939 GCGGATCCGAAACGTATTCAAAT 59.998 43.478 37.64 0.00 42.83 2.32
838 847 2.349275 GCGGATCCGAAACGTATTCAAA 59.651 45.455 37.64 0.00 42.83 2.69
839 848 1.928503 GCGGATCCGAAACGTATTCAA 59.071 47.619 37.64 0.00 42.83 2.69
840 849 1.135053 TGCGGATCCGAAACGTATTCA 60.135 47.619 37.64 18.85 42.83 2.57
841 850 1.257155 GTGCGGATCCGAAACGTATTC 59.743 52.381 37.64 16.38 42.83 1.75
842 851 1.283736 GTGCGGATCCGAAACGTATT 58.716 50.000 37.64 0.00 42.83 1.89
843 852 0.173935 TGTGCGGATCCGAAACGTAT 59.826 50.000 37.64 0.00 42.83 3.06
844 853 0.457166 CTGTGCGGATCCGAAACGTA 60.457 55.000 37.64 17.14 42.83 3.57
845 854 1.736645 CTGTGCGGATCCGAAACGT 60.737 57.895 37.64 0.00 42.83 3.99
846 855 1.413767 CTCTGTGCGGATCCGAAACG 61.414 60.000 37.64 25.03 42.83 3.60
847 856 1.696832 GCTCTGTGCGGATCCGAAAC 61.697 60.000 37.64 30.52 42.83 2.78
848 857 1.447838 GCTCTGTGCGGATCCGAAA 60.448 57.895 37.64 21.51 42.83 3.46
849 858 2.184322 GCTCTGTGCGGATCCGAA 59.816 61.111 37.64 26.68 42.83 4.30
850 859 3.068064 TGCTCTGTGCGGATCCGA 61.068 61.111 37.64 19.39 46.63 4.55
851 860 2.887568 GTGCTCTGTGCGGATCCG 60.888 66.667 30.03 30.03 46.63 4.18
852 861 2.279502 TACGTGCTCTGTGCGGATCC 62.280 60.000 0.00 0.00 46.63 3.36
853 862 0.249073 ATACGTGCTCTGTGCGGATC 60.249 55.000 0.00 0.00 46.63 3.36
854 863 0.528466 CATACGTGCTCTGTGCGGAT 60.528 55.000 0.00 0.00 46.63 4.18
855 864 1.153842 CATACGTGCTCTGTGCGGA 60.154 57.895 0.00 0.00 46.63 5.54
856 865 2.167219 CCATACGTGCTCTGTGCGG 61.167 63.158 0.00 0.00 46.63 5.69
857 866 2.167219 CCCATACGTGCTCTGTGCG 61.167 63.158 0.00 0.00 46.63 5.34
858 867 0.174845 TACCCATACGTGCTCTGTGC 59.825 55.000 0.00 0.00 43.25 4.57
859 868 1.476891 ACTACCCATACGTGCTCTGTG 59.523 52.381 0.00 0.00 0.00 3.66
860 869 1.476891 CACTACCCATACGTGCTCTGT 59.523 52.381 0.00 0.00 0.00 3.41
861 870 1.476891 ACACTACCCATACGTGCTCTG 59.523 52.381 0.00 0.00 32.07 3.35
862 871 1.476891 CACACTACCCATACGTGCTCT 59.523 52.381 0.00 0.00 32.07 4.09
863 872 1.203994 ACACACTACCCATACGTGCTC 59.796 52.381 0.00 0.00 32.07 4.26
864 873 1.263356 ACACACTACCCATACGTGCT 58.737 50.000 0.00 0.00 32.07 4.40
865 874 2.945447 TACACACTACCCATACGTGC 57.055 50.000 0.00 0.00 32.07 5.34
866 875 7.924412 AGATTTTATACACACTACCCATACGTG 59.076 37.037 0.00 0.00 34.92 4.49
867 876 8.015185 AGATTTTATACACACTACCCATACGT 57.985 34.615 0.00 0.00 0.00 3.57
868 877 8.139350 TGAGATTTTATACACACTACCCATACG 58.861 37.037 0.00 0.00 0.00 3.06
869 878 9.826574 TTGAGATTTTATACACACTACCCATAC 57.173 33.333 0.00 0.00 0.00 2.39
871 880 9.920946 ATTTGAGATTTTATACACACTACCCAT 57.079 29.630 0.00 0.00 0.00 4.00
872 881 9.391006 GATTTGAGATTTTATACACACTACCCA 57.609 33.333 0.00 0.00 0.00 4.51
873 882 9.391006 TGATTTGAGATTTTATACACACTACCC 57.609 33.333 0.00 0.00 0.00 3.69
880 889 9.760660 GGCGATATGATTTGAGATTTTATACAC 57.239 33.333 0.00 0.00 0.00 2.90
881 890 9.500785 TGGCGATATGATTTGAGATTTTATACA 57.499 29.630 0.00 0.00 0.00 2.29
882 891 9.979270 CTGGCGATATGATTTGAGATTTTATAC 57.021 33.333 0.00 0.00 0.00 1.47
883 892 9.166173 CCTGGCGATATGATTTGAGATTTTATA 57.834 33.333 0.00 0.00 0.00 0.98
884 893 7.884877 TCCTGGCGATATGATTTGAGATTTTAT 59.115 33.333 0.00 0.00 0.00 1.40
885 894 7.223584 TCCTGGCGATATGATTTGAGATTTTA 58.776 34.615 0.00 0.00 0.00 1.52
886 895 6.064060 TCCTGGCGATATGATTTGAGATTTT 58.936 36.000 0.00 0.00 0.00 1.82
887 896 5.624159 TCCTGGCGATATGATTTGAGATTT 58.376 37.500 0.00 0.00 0.00 2.17
888 897 5.233083 TCCTGGCGATATGATTTGAGATT 57.767 39.130 0.00 0.00 0.00 2.40
889 898 4.897509 TCCTGGCGATATGATTTGAGAT 57.102 40.909 0.00 0.00 0.00 2.75
890 899 4.503817 CCTTCCTGGCGATATGATTTGAGA 60.504 45.833 0.00 0.00 0.00 3.27
891 900 3.750130 CCTTCCTGGCGATATGATTTGAG 59.250 47.826 0.00 0.00 0.00 3.02
892 901 3.136443 ACCTTCCTGGCGATATGATTTGA 59.864 43.478 0.00 0.00 40.22 2.69
893 902 3.480470 ACCTTCCTGGCGATATGATTTG 58.520 45.455 0.00 0.00 40.22 2.32
894 903 3.864789 ACCTTCCTGGCGATATGATTT 57.135 42.857 0.00 0.00 40.22 2.17
895 904 4.974645 TTACCTTCCTGGCGATATGATT 57.025 40.909 0.00 0.00 40.22 2.57
896 905 4.505039 GGTTTACCTTCCTGGCGATATGAT 60.505 45.833 0.00 0.00 40.22 2.45
897 906 3.181458 GGTTTACCTTCCTGGCGATATGA 60.181 47.826 0.00 0.00 40.22 2.15
898 907 3.139077 GGTTTACCTTCCTGGCGATATG 58.861 50.000 0.00 0.00 40.22 1.78
899 908 3.046374 AGGTTTACCTTCCTGGCGATAT 58.954 45.455 0.00 0.00 46.09 1.63
900 909 2.474112 AGGTTTACCTTCCTGGCGATA 58.526 47.619 0.00 0.00 46.09 2.92
901 910 1.286248 AGGTTTACCTTCCTGGCGAT 58.714 50.000 0.00 0.00 46.09 4.58
902 911 2.768046 AGGTTTACCTTCCTGGCGA 58.232 52.632 0.00 0.00 46.09 5.54
911 920 7.695806 GGAGTATCTATCAGAGGAGGTTTACCT 60.696 44.444 0.00 0.00 42.48 3.08
912 921 6.434965 GGAGTATCTATCAGAGGAGGTTTACC 59.565 46.154 0.00 0.00 33.73 2.85
913 922 7.005296 TGGAGTATCTATCAGAGGAGGTTTAC 58.995 42.308 0.00 0.00 33.73 2.01
914 923 7.005296 GTGGAGTATCTATCAGAGGAGGTTTA 58.995 42.308 0.00 0.00 33.73 2.01
915 924 5.836358 GTGGAGTATCTATCAGAGGAGGTTT 59.164 44.000 0.00 0.00 33.73 3.27
916 925 5.390387 GTGGAGTATCTATCAGAGGAGGTT 58.610 45.833 0.00 0.00 33.73 3.50
917 926 4.505918 CGTGGAGTATCTATCAGAGGAGGT 60.506 50.000 0.00 0.00 33.73 3.85
918 927 4.006989 CGTGGAGTATCTATCAGAGGAGG 58.993 52.174 0.00 0.00 33.73 4.30
919 928 3.438781 GCGTGGAGTATCTATCAGAGGAG 59.561 52.174 0.00 0.00 33.73 3.69
920 929 3.413327 GCGTGGAGTATCTATCAGAGGA 58.587 50.000 0.00 0.00 33.73 3.71
921 930 2.490115 GGCGTGGAGTATCTATCAGAGG 59.510 54.545 0.00 0.00 33.73 3.69
922 931 3.417101 AGGCGTGGAGTATCTATCAGAG 58.583 50.000 0.00 0.00 33.73 3.35
923 932 3.510531 AGGCGTGGAGTATCTATCAGA 57.489 47.619 0.00 0.00 33.73 3.27
924 933 5.704888 CTTTAGGCGTGGAGTATCTATCAG 58.295 45.833 0.00 0.00 33.73 2.90
925 934 4.022242 GCTTTAGGCGTGGAGTATCTATCA 60.022 45.833 0.00 0.00 33.73 2.15
926 935 4.022242 TGCTTTAGGCGTGGAGTATCTATC 60.022 45.833 0.00 0.00 45.43 2.08
927 936 3.895656 TGCTTTAGGCGTGGAGTATCTAT 59.104 43.478 0.00 0.00 45.43 1.98
928 937 3.067742 GTGCTTTAGGCGTGGAGTATCTA 59.932 47.826 0.00 0.00 45.43 1.98
929 938 2.108168 TGCTTTAGGCGTGGAGTATCT 58.892 47.619 0.00 0.00 45.43 1.98
930 939 2.202566 GTGCTTTAGGCGTGGAGTATC 58.797 52.381 0.00 0.00 45.43 2.24
931 940 1.470979 CGTGCTTTAGGCGTGGAGTAT 60.471 52.381 0.00 0.00 45.43 2.12
932 941 0.108992 CGTGCTTTAGGCGTGGAGTA 60.109 55.000 0.00 0.00 45.43 2.59
933 942 1.374252 CGTGCTTTAGGCGTGGAGT 60.374 57.895 0.00 0.00 45.43 3.85
934 943 0.108992 TACGTGCTTTAGGCGTGGAG 60.109 55.000 0.00 0.00 45.43 3.86
935 944 0.533491 ATACGTGCTTTAGGCGTGGA 59.467 50.000 0.00 0.00 45.43 4.02
936 945 0.650512 CATACGTGCTTTAGGCGTGG 59.349 55.000 0.00 0.00 45.43 4.94
937 946 1.588404 CTCATACGTGCTTTAGGCGTG 59.412 52.381 0.00 0.00 45.43 5.34
938 947 1.203994 ACTCATACGTGCTTTAGGCGT 59.796 47.619 0.00 0.00 45.43 5.68
939 948 1.922570 ACTCATACGTGCTTTAGGCG 58.077 50.000 0.00 0.00 45.43 5.52
940 949 4.043037 ACTACTCATACGTGCTTTAGGC 57.957 45.455 0.00 0.00 42.22 3.93
941 950 6.037940 TGTCTACTACTCATACGTGCTTTAGG 59.962 42.308 0.00 0.00 0.00 2.69
942 951 7.012959 TGTCTACTACTCATACGTGCTTTAG 57.987 40.000 0.00 0.00 0.00 1.85
943 952 6.990341 TGTCTACTACTCATACGTGCTTTA 57.010 37.500 0.00 0.00 0.00 1.85
944 953 5.892160 TGTCTACTACTCATACGTGCTTT 57.108 39.130 0.00 0.00 0.00 3.51
945 954 5.823570 AGATGTCTACTACTCATACGTGCTT 59.176 40.000 0.00 0.00 0.00 3.91
946 955 5.369833 AGATGTCTACTACTCATACGTGCT 58.630 41.667 0.00 0.00 0.00 4.40
947 956 5.236695 TGAGATGTCTACTACTCATACGTGC 59.763 44.000 0.00 0.00 35.01 5.34
948 957 6.073494 CCTGAGATGTCTACTACTCATACGTG 60.073 46.154 0.00 0.00 38.43 4.49
949 958 5.992829 CCTGAGATGTCTACTACTCATACGT 59.007 44.000 0.00 0.00 38.43 3.57
950 959 6.146510 GTCCTGAGATGTCTACTACTCATACG 59.853 46.154 0.00 0.00 38.43 3.06
951 960 6.428771 GGTCCTGAGATGTCTACTACTCATAC 59.571 46.154 0.00 0.00 38.43 2.39
952 961 6.330514 AGGTCCTGAGATGTCTACTACTCATA 59.669 42.308 0.00 0.00 38.43 2.15
953 962 5.133660 AGGTCCTGAGATGTCTACTACTCAT 59.866 44.000 0.00 0.00 38.43 2.90
954 963 4.475381 AGGTCCTGAGATGTCTACTACTCA 59.525 45.833 0.00 0.00 37.71 3.41
955 964 5.043737 AGGTCCTGAGATGTCTACTACTC 57.956 47.826 0.00 0.00 0.00 2.59
956 965 5.668535 ACTAGGTCCTGAGATGTCTACTACT 59.331 44.000 0.00 0.00 0.00 2.57
957 966 5.932455 ACTAGGTCCTGAGATGTCTACTAC 58.068 45.833 0.00 0.00 0.00 2.73
958 967 6.358178 CAACTAGGTCCTGAGATGTCTACTA 58.642 44.000 0.00 0.00 0.00 1.82
959 968 5.197451 CAACTAGGTCCTGAGATGTCTACT 58.803 45.833 0.00 0.00 0.00 2.57
960 969 4.202070 GCAACTAGGTCCTGAGATGTCTAC 60.202 50.000 0.00 0.00 0.00 2.59
961 970 3.954904 GCAACTAGGTCCTGAGATGTCTA 59.045 47.826 0.00 0.00 0.00 2.59
962 971 2.763448 GCAACTAGGTCCTGAGATGTCT 59.237 50.000 0.00 0.00 0.00 3.41
963 972 2.497675 TGCAACTAGGTCCTGAGATGTC 59.502 50.000 0.00 0.00 0.00 3.06
964 973 2.234908 GTGCAACTAGGTCCTGAGATGT 59.765 50.000 0.00 0.00 0.00 3.06
973 982 2.775032 TTCCGGCGTGCAACTAGGTC 62.775 60.000 6.01 0.00 31.75 3.85
978 987 2.110213 TTCTTCCGGCGTGCAACT 59.890 55.556 6.01 0.00 31.75 3.16
985 994 1.278238 GACATGTAGTTCTTCCGGCG 58.722 55.000 0.00 0.00 0.00 6.46
991 1000 0.739813 GGCGGCGACATGTAGTTCTT 60.740 55.000 12.98 0.00 0.00 2.52
1044 1059 4.436998 GCCCAGACCTCCACGACG 62.437 72.222 0.00 0.00 0.00 5.12
1062 1077 1.364171 CTCCGCCTCCTCGTTATGG 59.636 63.158 0.00 0.00 0.00 2.74
1086 1101 0.965866 TGAAGAGGTCGGAGATGCGT 60.966 55.000 0.00 0.00 40.67 5.24
1110 1125 3.202706 GCGACGGGGAATTCCAGC 61.203 66.667 25.67 17.12 37.91 4.85
1114 1129 0.462047 ATGACTGCGACGGGGAATTC 60.462 55.000 0.00 0.00 0.00 2.17
1487 1502 2.813179 CGGCTGTTGTAGATGGCGC 61.813 63.158 0.00 0.00 41.11 6.53
1776 1791 3.151710 TACCCCACCATCCGCTCG 61.152 66.667 0.00 0.00 0.00 5.03
1929 3523 3.119029 AGGATCAAAACCCGAATGCATTG 60.119 43.478 18.59 9.14 0.00 2.82
1944 3538 4.715534 TGGTTACACAAGGAAGGATCAA 57.284 40.909 0.00 0.00 0.00 2.57
2063 3665 7.075741 GCAGTTTATCTTTTCTAAACTTGCGA 58.924 34.615 5.88 0.00 43.46 5.10
2081 3685 8.300286 TGATTATTTTCCGATTGTTGCAGTTTA 58.700 29.630 0.00 0.00 0.00 2.01
2084 3688 6.266168 TGATTATTTTCCGATTGTTGCAGT 57.734 33.333 0.00 0.00 0.00 4.40
2085 3689 7.579589 TTTGATTATTTTCCGATTGTTGCAG 57.420 32.000 0.00 0.00 0.00 4.41
2095 3699 8.028938 AGTGAAGTGGATTTTGATTATTTTCCG 58.971 33.333 0.00 0.00 0.00 4.30
2134 3739 9.396022 TCATTGCTCTCTATATATACATCGTCA 57.604 33.333 0.00 0.00 0.00 4.35
2191 3815 6.261435 TCAACCTCCTCTATCCTTTACTTCA 58.739 40.000 0.00 0.00 0.00 3.02
2192 3816 6.793505 TCAACCTCCTCTATCCTTTACTTC 57.206 41.667 0.00 0.00 0.00 3.01
2200 3824 3.118592 CCACTGTTCAACCTCCTCTATCC 60.119 52.174 0.00 0.00 0.00 2.59
2201 3825 3.769844 TCCACTGTTCAACCTCCTCTATC 59.230 47.826 0.00 0.00 0.00 2.08
2204 3828 2.103153 TCCACTGTTCAACCTCCTCT 57.897 50.000 0.00 0.00 0.00 3.69
2206 3830 2.840651 CCTATCCACTGTTCAACCTCCT 59.159 50.000 0.00 0.00 0.00 3.69
2216 3841 1.318380 CCCCTCCCCTATCCACTGT 59.682 63.158 0.00 0.00 0.00 3.55
2236 3861 6.366340 AGTTGTCGGAATCTATCTCTAAGGA 58.634 40.000 0.00 0.00 0.00 3.36
2269 3894 1.304254 TGTGCTTGTATTGTGCGTGT 58.696 45.000 0.00 0.00 0.00 4.49
2270 3895 2.286950 ACTTGTGCTTGTATTGTGCGTG 60.287 45.455 0.00 0.00 0.00 5.34
2272 3897 2.574322 GACTTGTGCTTGTATTGTGCG 58.426 47.619 0.00 0.00 0.00 5.34
2291 3916 2.439701 CTACCCTGACCTCCGCGA 60.440 66.667 8.23 0.00 0.00 5.87
2294 3919 1.077930 TCGTCTACCCTGACCTCCG 60.078 63.158 0.00 0.00 33.70 4.63
2303 3928 3.244078 TGGAATGCATATGTCGTCTACCC 60.244 47.826 0.00 0.00 0.00 3.69
2307 3932 4.454678 ACAATGGAATGCATATGTCGTCT 58.545 39.130 0.00 0.00 0.00 4.18
2315 3940 6.404184 CGGTTACTGAAACAATGGAATGCATA 60.404 38.462 0.00 0.00 40.08 3.14
2321 3946 5.838531 AAACGGTTACTGAAACAATGGAA 57.161 34.783 0.00 0.00 40.08 3.53
2338 3963 0.750249 ACTTTCAAGGGCCAAAACGG 59.250 50.000 6.18 0.00 38.11 4.44
2344 3969 2.597217 CGCCACTTTCAAGGGCCA 60.597 61.111 6.18 0.00 38.41 5.36
2353 3978 0.112412 AAGTCCCAATCCGCCACTTT 59.888 50.000 0.00 0.00 0.00 2.66
2378 4003 0.181350 CACCCCATCTAGCTTGTCCC 59.819 60.000 0.00 0.00 0.00 4.46
2405 4030 1.927895 AATCTCGTCATCCTCGTTGC 58.072 50.000 0.00 0.00 0.00 4.17
2459 4084 6.455690 AAATTTCTCTGTATAGGGATCCCC 57.544 41.667 28.11 12.57 45.90 4.81
2460 4085 7.518188 TGAAAATTTCTCTGTATAGGGATCCC 58.482 38.462 24.59 24.59 32.26 3.85
2490 4115 1.948104 TCACCTCACCTTGTGTTTCG 58.052 50.000 0.00 0.00 34.79 3.46
2560 4194 2.171003 CCACCCAGAATTTGGTTCCTC 58.829 52.381 6.09 0.00 46.25 3.71
2575 4209 5.710099 TCTTTTGATCACTTGATTACCACCC 59.290 40.000 0.00 0.00 34.37 4.61
2576 4210 6.817765 TCTTTTGATCACTTGATTACCACC 57.182 37.500 0.00 0.00 34.37 4.61
2604 4238 2.743928 GCACTTGCCGACTCCTGG 60.744 66.667 0.00 0.00 34.31 4.45
2627 4263 3.742369 CACAAATTTCATCTTGGGCACAC 59.258 43.478 0.00 0.00 0.00 3.82
2630 4266 3.006752 GGTCACAAATTTCATCTTGGGCA 59.993 43.478 0.00 0.00 0.00 5.36
2632 4268 4.870123 TGGTCACAAATTTCATCTTGGG 57.130 40.909 0.00 0.00 0.00 4.12
2641 4277 8.877864 TCTAAATAGGACATGGTCACAAATTT 57.122 30.769 0.00 0.00 33.68 1.82
2644 4280 6.318648 GCATCTAAATAGGACATGGTCACAAA 59.681 38.462 0.00 0.00 33.68 2.83
2648 4284 4.100963 ACGCATCTAAATAGGACATGGTCA 59.899 41.667 0.00 0.00 33.68 4.02
2651 4287 4.816385 ACAACGCATCTAAATAGGACATGG 59.184 41.667 0.00 0.00 0.00 3.66
2660 4296 8.942338 TGAATCTTACTACAACGCATCTAAAT 57.058 30.769 0.00 0.00 0.00 1.40
2670 4306 6.092259 ACGCTCCAAATGAATCTTACTACAAC 59.908 38.462 0.00 0.00 0.00 3.32
2672 4308 5.730550 ACGCTCCAAATGAATCTTACTACA 58.269 37.500 0.00 0.00 0.00 2.74
2673 4309 5.810587 TGACGCTCCAAATGAATCTTACTAC 59.189 40.000 0.00 0.00 0.00 2.73
2675 4311 4.631813 GTGACGCTCCAAATGAATCTTACT 59.368 41.667 0.00 0.00 0.00 2.24
2677 4313 4.832248 AGTGACGCTCCAAATGAATCTTA 58.168 39.130 0.00 0.00 0.00 2.10
2681 4317 3.055094 ACCTAGTGACGCTCCAAATGAAT 60.055 43.478 0.00 0.00 0.00 2.57
2684 4320 2.386661 ACCTAGTGACGCTCCAAATG 57.613 50.000 0.00 0.00 0.00 2.32
2693 4329 1.681793 CCCATGGTCTACCTAGTGACG 59.318 57.143 11.73 0.00 36.82 4.35
2696 4332 1.794714 AGCCCATGGTCTACCTAGTG 58.205 55.000 11.73 0.00 36.82 2.74
2698 4334 4.024670 GGTATAGCCCATGGTCTACCTAG 58.975 52.174 11.73 0.00 38.19 3.02
2703 4339 2.453212 TCCAGGTATAGCCCATGGTCTA 59.547 50.000 11.73 8.21 38.26 2.59
2710 4346 1.209621 GGTGTTCCAGGTATAGCCCA 58.790 55.000 0.00 0.00 38.26 5.36
2711 4347 1.209621 TGGTGTTCCAGGTATAGCCC 58.790 55.000 0.00 0.00 39.03 5.19
2728 4364 4.382577 GGTGTAAATTAGCAAACCCCATGG 60.383 45.833 4.14 4.14 37.80 3.66
2729 4365 4.221703 TGGTGTAAATTAGCAAACCCCATG 59.778 41.667 0.00 0.00 0.00 3.66
2730 4366 4.421131 TGGTGTAAATTAGCAAACCCCAT 58.579 39.130 0.00 0.00 0.00 4.00
2731 4367 3.845860 TGGTGTAAATTAGCAAACCCCA 58.154 40.909 0.00 0.00 0.00 4.96
2732 4368 4.709886 AGATGGTGTAAATTAGCAAACCCC 59.290 41.667 0.00 0.00 0.00 4.95
2733 4369 5.914898 AGATGGTGTAAATTAGCAAACCC 57.085 39.130 0.00 0.00 0.00 4.11
2734 4370 7.158099 AGAAGATGGTGTAAATTAGCAAACC 57.842 36.000 0.00 0.00 0.00 3.27
2737 4373 8.902806 CCATTAGAAGATGGTGTAAATTAGCAA 58.097 33.333 0.00 0.00 41.37 3.91
2738 4374 7.502226 CCCATTAGAAGATGGTGTAAATTAGCA 59.498 37.037 3.47 0.00 44.17 3.49
2739 4375 7.040409 CCCCATTAGAAGATGGTGTAAATTAGC 60.040 40.741 3.47 0.00 44.17 3.09
2740 4376 8.217799 TCCCCATTAGAAGATGGTGTAAATTAG 58.782 37.037 3.47 0.00 44.17 1.73
2741 4377 7.996644 GTCCCCATTAGAAGATGGTGTAAATTA 59.003 37.037 3.47 0.00 44.17 1.40
2742 4378 6.833933 GTCCCCATTAGAAGATGGTGTAAATT 59.166 38.462 3.47 0.00 44.17 1.82
2743 4379 6.365520 GTCCCCATTAGAAGATGGTGTAAAT 58.634 40.000 3.47 0.00 44.17 1.40
2744 4380 5.339695 GGTCCCCATTAGAAGATGGTGTAAA 60.340 44.000 3.47 0.00 44.17 2.01
2745 4381 4.165372 GGTCCCCATTAGAAGATGGTGTAA 59.835 45.833 3.47 0.00 44.17 2.41
2746 4382 3.714798 GGTCCCCATTAGAAGATGGTGTA 59.285 47.826 3.47 0.00 44.17 2.90
2747 4383 2.509964 GGTCCCCATTAGAAGATGGTGT 59.490 50.000 3.47 0.00 44.17 4.16
2748 4384 2.780010 AGGTCCCCATTAGAAGATGGTG 59.220 50.000 3.47 0.00 44.17 4.17
2749 4385 2.780010 CAGGTCCCCATTAGAAGATGGT 59.220 50.000 3.47 0.00 44.17 3.55
2750 4386 2.107204 CCAGGTCCCCATTAGAAGATGG 59.893 54.545 0.00 0.00 45.05 3.51
2751 4387 2.107204 CCCAGGTCCCCATTAGAAGATG 59.893 54.545 0.00 0.00 0.00 2.90
2752 4388 2.422746 CCCAGGTCCCCATTAGAAGAT 58.577 52.381 0.00 0.00 0.00 2.40
2753 4389 1.628043 CCCCAGGTCCCCATTAGAAGA 60.628 57.143 0.00 0.00 0.00 2.87
2754 4390 0.846693 CCCCAGGTCCCCATTAGAAG 59.153 60.000 0.00 0.00 0.00 2.85
2755 4391 0.423956 TCCCCAGGTCCCCATTAGAA 59.576 55.000 0.00 0.00 0.00 2.10
2756 4392 0.423956 TTCCCCAGGTCCCCATTAGA 59.576 55.000 0.00 0.00 0.00 2.10
2757 4393 0.846693 CTTCCCCAGGTCCCCATTAG 59.153 60.000 0.00 0.00 0.00 1.73
2758 4394 0.423956 TCTTCCCCAGGTCCCCATTA 59.576 55.000 0.00 0.00 0.00 1.90
2759 4395 0.921256 CTCTTCCCCAGGTCCCCATT 60.921 60.000 0.00 0.00 0.00 3.16
2760 4396 1.308216 CTCTTCCCCAGGTCCCCAT 60.308 63.158 0.00 0.00 0.00 4.00
2761 4397 1.837533 ATCTCTTCCCCAGGTCCCCA 61.838 60.000 0.00 0.00 0.00 4.96
2762 4398 0.267960 TATCTCTTCCCCAGGTCCCC 59.732 60.000 0.00 0.00 0.00 4.81
2763 4399 1.220750 TCTATCTCTTCCCCAGGTCCC 59.779 57.143 0.00 0.00 0.00 4.46
2764 4400 2.321719 GTCTATCTCTTCCCCAGGTCC 58.678 57.143 0.00 0.00 0.00 4.46
2765 4401 1.957877 CGTCTATCTCTTCCCCAGGTC 59.042 57.143 0.00 0.00 0.00 3.85
2766 4402 1.569548 TCGTCTATCTCTTCCCCAGGT 59.430 52.381 0.00 0.00 0.00 4.00
2767 4403 2.366640 TCGTCTATCTCTTCCCCAGG 57.633 55.000 0.00 0.00 0.00 4.45
2768 4404 5.074115 ACTATTCGTCTATCTCTTCCCCAG 58.926 45.833 0.00 0.00 0.00 4.45
2769 4405 5.063017 ACTATTCGTCTATCTCTTCCCCA 57.937 43.478 0.00 0.00 0.00 4.96
2770 4406 6.217294 CAAACTATTCGTCTATCTCTTCCCC 58.783 44.000 0.00 0.00 0.00 4.81
2771 4407 6.040616 TCCAAACTATTCGTCTATCTCTTCCC 59.959 42.308 0.00 0.00 0.00 3.97
2772 4408 7.040473 TCCAAACTATTCGTCTATCTCTTCC 57.960 40.000 0.00 0.00 0.00 3.46
2773 4409 8.973378 CAATCCAAACTATTCGTCTATCTCTTC 58.027 37.037 0.00 0.00 0.00 2.87
2774 4410 8.696374 TCAATCCAAACTATTCGTCTATCTCTT 58.304 33.333 0.00 0.00 0.00 2.85
2775 4411 8.239038 TCAATCCAAACTATTCGTCTATCTCT 57.761 34.615 0.00 0.00 0.00 3.10
2776 4412 9.482627 AATCAATCCAAACTATTCGTCTATCTC 57.517 33.333 0.00 0.00 0.00 2.75
2777 4413 9.838339 AAATCAATCCAAACTATTCGTCTATCT 57.162 29.630 0.00 0.00 0.00 1.98
2780 4416 8.181573 GCAAAATCAATCCAAACTATTCGTCTA 58.818 33.333 0.00 0.00 0.00 2.59
2781 4417 7.029563 GCAAAATCAATCCAAACTATTCGTCT 58.970 34.615 0.00 0.00 0.00 4.18
2782 4418 6.021468 CGCAAAATCAATCCAAACTATTCGTC 60.021 38.462 0.00 0.00 0.00 4.20
2783 4419 5.799936 CGCAAAATCAATCCAAACTATTCGT 59.200 36.000 0.00 0.00 0.00 3.85
2784 4420 5.229887 CCGCAAAATCAATCCAAACTATTCG 59.770 40.000 0.00 0.00 0.00 3.34
2785 4421 5.005682 GCCGCAAAATCAATCCAAACTATTC 59.994 40.000 0.00 0.00 0.00 1.75
2786 4422 4.869861 GCCGCAAAATCAATCCAAACTATT 59.130 37.500 0.00 0.00 0.00 1.73
2787 4423 4.432712 GCCGCAAAATCAATCCAAACTAT 58.567 39.130 0.00 0.00 0.00 2.12
2788 4424 3.671971 CGCCGCAAAATCAATCCAAACTA 60.672 43.478 0.00 0.00 0.00 2.24
2789 4425 2.687370 GCCGCAAAATCAATCCAAACT 58.313 42.857 0.00 0.00 0.00 2.66
2790 4426 1.389784 CGCCGCAAAATCAATCCAAAC 59.610 47.619 0.00 0.00 0.00 2.93
2791 4427 1.270826 TCGCCGCAAAATCAATCCAAA 59.729 42.857 0.00 0.00 0.00 3.28
2792 4428 0.884514 TCGCCGCAAAATCAATCCAA 59.115 45.000 0.00 0.00 0.00 3.53
2793 4429 1.102154 ATCGCCGCAAAATCAATCCA 58.898 45.000 0.00 0.00 0.00 3.41
2794 4430 1.854126 CAATCGCCGCAAAATCAATCC 59.146 47.619 0.00 0.00 0.00 3.01
2795 4431 1.256117 GCAATCGCCGCAAAATCAATC 59.744 47.619 0.00 0.00 0.00 2.67
2796 4432 1.135024 AGCAATCGCCGCAAAATCAAT 60.135 42.857 0.00 0.00 39.83 2.57
2797 4433 0.243365 AGCAATCGCCGCAAAATCAA 59.757 45.000 0.00 0.00 39.83 2.57
2798 4434 0.243365 AAGCAATCGCCGCAAAATCA 59.757 45.000 0.00 0.00 39.83 2.57
2799 4435 0.641783 CAAGCAATCGCCGCAAAATC 59.358 50.000 0.00 0.00 39.83 2.17
2800 4436 0.243365 TCAAGCAATCGCCGCAAAAT 59.757 45.000 0.00 0.00 39.83 1.82
2801 4437 0.031314 TTCAAGCAATCGCCGCAAAA 59.969 45.000 0.00 0.00 39.83 2.44
2802 4438 0.662970 GTTCAAGCAATCGCCGCAAA 60.663 50.000 0.00 0.00 39.83 3.68
2803 4439 1.081509 GTTCAAGCAATCGCCGCAA 60.082 52.632 0.00 0.00 39.83 4.85
2804 4440 2.560861 GTTCAAGCAATCGCCGCA 59.439 55.556 0.00 0.00 39.83 5.69
2805 4441 2.200170 AAGGTTCAAGCAATCGCCGC 62.200 55.000 0.00 0.00 39.83 6.53
2806 4442 0.454957 CAAGGTTCAAGCAATCGCCG 60.455 55.000 0.00 0.00 39.83 6.46
2807 4443 0.598065 ACAAGGTTCAAGCAATCGCC 59.402 50.000 0.00 0.00 39.83 5.54
2808 4444 1.666888 CCACAAGGTTCAAGCAATCGC 60.667 52.381 0.00 0.00 38.99 4.58
2809 4445 1.879380 TCCACAAGGTTCAAGCAATCG 59.121 47.619 0.00 0.00 35.89 3.34
2810 4446 2.350772 CGTCCACAAGGTTCAAGCAATC 60.351 50.000 0.00 0.00 35.89 2.67
2811 4447 1.608590 CGTCCACAAGGTTCAAGCAAT 59.391 47.619 0.00 0.00 35.89 3.56
2812 4448 1.021202 CGTCCACAAGGTTCAAGCAA 58.979 50.000 0.00 0.00 35.89 3.91
2813 4449 0.179234 TCGTCCACAAGGTTCAAGCA 59.821 50.000 0.00 0.00 35.89 3.91
2814 4450 0.586802 GTCGTCCACAAGGTTCAAGC 59.413 55.000 0.00 0.00 35.89 4.01
2815 4451 1.226746 GGTCGTCCACAAGGTTCAAG 58.773 55.000 0.00 0.00 35.89 3.02
2816 4452 0.179040 GGGTCGTCCACAAGGTTCAA 60.179 55.000 0.04 0.00 35.89 2.69
2817 4453 1.448497 GGGTCGTCCACAAGGTTCA 59.552 57.895 0.04 0.00 35.89 3.18
2818 4454 1.666872 CGGGTCGTCCACAAGGTTC 60.667 63.158 0.04 0.00 35.89 3.62
2819 4455 2.424302 CGGGTCGTCCACAAGGTT 59.576 61.111 0.04 0.00 35.89 3.50
2820 4456 4.309950 GCGGGTCGTCCACAAGGT 62.310 66.667 0.04 0.00 35.89 3.50
2822 4458 4.351938 TCGCGGGTCGTCCACAAG 62.352 66.667 6.13 0.00 39.67 3.16
2823 4459 4.651008 GTCGCGGGTCGTCCACAA 62.651 66.667 6.13 0.00 39.67 3.33
2825 4461 4.651008 TTGTCGCGGGTCGTCCAC 62.651 66.667 6.13 0.00 39.67 4.02
2826 4462 3.229156 ATTTGTCGCGGGTCGTCCA 62.229 57.895 6.13 0.00 39.67 4.02
2827 4463 2.433664 ATTTGTCGCGGGTCGTCC 60.434 61.111 6.13 0.00 39.67 4.79
2828 4464 1.012486 AAGATTTGTCGCGGGTCGTC 61.012 55.000 6.13 0.00 39.67 4.20
2829 4465 0.601841 AAAGATTTGTCGCGGGTCGT 60.602 50.000 6.13 0.00 39.67 4.34
2830 4466 1.352114 TAAAGATTTGTCGCGGGTCG 58.648 50.000 6.13 0.00 40.15 4.79
2831 4467 4.807304 TCTATTAAAGATTTGTCGCGGGTC 59.193 41.667 6.13 0.00 0.00 4.46
2832 4468 4.761975 TCTATTAAAGATTTGTCGCGGGT 58.238 39.130 6.13 0.00 0.00 5.28
2833 4469 4.211374 CCTCTATTAAAGATTTGTCGCGGG 59.789 45.833 6.13 0.00 32.41 6.13
2834 4470 4.211374 CCCTCTATTAAAGATTTGTCGCGG 59.789 45.833 6.13 0.00 32.41 6.46
2835 4471 5.047847 TCCCTCTATTAAAGATTTGTCGCG 58.952 41.667 0.00 0.00 32.41 5.87
2836 4472 6.706270 TCATCCCTCTATTAAAGATTTGTCGC 59.294 38.462 0.00 0.00 32.41 5.19
2837 4473 8.839310 ATCATCCCTCTATTAAAGATTTGTCG 57.161 34.615 0.00 0.00 32.41 4.35
2851 4487 9.749340 TCGAGTGTTTTATATATCATCCCTCTA 57.251 33.333 0.00 0.00 0.00 2.43
2852 4488 8.524487 GTCGAGTGTTTTATATATCATCCCTCT 58.476 37.037 0.00 0.00 0.00 3.69
2853 4489 8.524487 AGTCGAGTGTTTTATATATCATCCCTC 58.476 37.037 0.00 0.00 0.00 4.30
2854 4490 8.423906 AGTCGAGTGTTTTATATATCATCCCT 57.576 34.615 0.00 0.00 0.00 4.20
2858 4494 9.622004 CGGTTAGTCGAGTGTTTTATATATCAT 57.378 33.333 2.10 0.00 0.00 2.45
2859 4495 8.839343 TCGGTTAGTCGAGTGTTTTATATATCA 58.161 33.333 2.10 0.00 34.82 2.15
2874 4510 4.566545 TTTTGTACACTCGGTTAGTCGA 57.433 40.909 0.00 0.00 35.76 4.20
2875 4511 5.834239 AATTTTGTACACTCGGTTAGTCG 57.166 39.130 0.00 0.00 35.76 4.18
2876 4512 7.831750 CAAAATTTTGTACACTCGGTTAGTC 57.168 36.000 20.57 0.00 32.91 2.59
2895 4531 9.598517 TCTTCAAAATAGCAACAGAAACAAAAT 57.401 25.926 0.00 0.00 0.00 1.82
2896 4532 8.994429 TCTTCAAAATAGCAACAGAAACAAAA 57.006 26.923 0.00 0.00 0.00 2.44
2897 4533 7.222611 GCTCTTCAAAATAGCAACAGAAACAAA 59.777 33.333 0.00 0.00 36.26 2.83
2898 4534 6.697019 GCTCTTCAAAATAGCAACAGAAACAA 59.303 34.615 0.00 0.00 36.26 2.83
2899 4535 6.208644 GCTCTTCAAAATAGCAACAGAAACA 58.791 36.000 0.00 0.00 36.26 2.83
2900 4536 5.340667 CGCTCTTCAAAATAGCAACAGAAAC 59.659 40.000 0.00 0.00 35.98 2.78
2901 4537 5.451908 CGCTCTTCAAAATAGCAACAGAAA 58.548 37.500 0.00 0.00 35.98 2.52
2902 4538 4.613622 GCGCTCTTCAAAATAGCAACAGAA 60.614 41.667 0.00 0.00 35.98 3.02
2903 4539 3.120199 GCGCTCTTCAAAATAGCAACAGA 60.120 43.478 0.00 0.00 35.98 3.41
2904 4540 3.120060 AGCGCTCTTCAAAATAGCAACAG 60.120 43.478 2.64 0.00 35.98 3.16
2905 4541 2.813754 AGCGCTCTTCAAAATAGCAACA 59.186 40.909 2.64 0.00 35.98 3.33
2906 4542 3.420828 GAGCGCTCTTCAAAATAGCAAC 58.579 45.455 29.88 0.00 35.98 4.17
2907 4543 2.094258 CGAGCGCTCTTCAAAATAGCAA 59.906 45.455 32.88 0.00 35.98 3.91
2908 4544 1.660607 CGAGCGCTCTTCAAAATAGCA 59.339 47.619 32.88 0.00 35.98 3.49
2909 4545 1.004504 CCGAGCGCTCTTCAAAATAGC 60.005 52.381 32.88 5.03 0.00 2.97
2910 4546 2.540515 TCCGAGCGCTCTTCAAAATAG 58.459 47.619 32.88 15.07 0.00 1.73
2911 4547 2.665649 TCCGAGCGCTCTTCAAAATA 57.334 45.000 32.88 8.11 0.00 1.40
2912 4548 1.808411 TTCCGAGCGCTCTTCAAAAT 58.192 45.000 32.88 0.00 0.00 1.82
2913 4549 1.588674 TTTCCGAGCGCTCTTCAAAA 58.411 45.000 32.88 22.61 0.00 2.44
2914 4550 1.263217 GTTTTCCGAGCGCTCTTCAAA 59.737 47.619 32.88 23.78 0.00 2.69
2915 4551 0.865769 GTTTTCCGAGCGCTCTTCAA 59.134 50.000 32.88 19.79 0.00 2.69
2916 4552 0.249699 TGTTTTCCGAGCGCTCTTCA 60.250 50.000 32.88 18.87 0.00 3.02
2917 4553 0.440371 CTGTTTTCCGAGCGCTCTTC 59.560 55.000 32.88 16.80 0.00 2.87
2918 4554 1.569479 GCTGTTTTCCGAGCGCTCTT 61.569 55.000 32.88 0.37 0.00 2.85
2919 4555 2.029844 GCTGTTTTCCGAGCGCTCT 61.030 57.895 32.88 1.30 0.00 4.09
2920 4556 2.233007 CTGCTGTTTTCCGAGCGCTC 62.233 60.000 27.64 27.64 38.09 5.03
2921 4557 2.280797 TGCTGTTTTCCGAGCGCT 60.281 55.556 11.27 11.27 38.09 5.92
2922 4558 2.174349 CTGCTGTTTTCCGAGCGC 59.826 61.111 0.00 0.00 38.09 5.92
2923 4559 1.667830 TCCTGCTGTTTTCCGAGCG 60.668 57.895 0.00 0.00 38.09 5.03
2924 4560 0.603975 AGTCCTGCTGTTTTCCGAGC 60.604 55.000 0.00 0.00 35.65 5.03
2925 4561 1.151668 CAGTCCTGCTGTTTTCCGAG 58.848 55.000 0.00 0.00 40.27 4.63
2926 4562 0.756294 TCAGTCCTGCTGTTTTCCGA 59.244 50.000 0.00 0.00 45.23 4.55
2927 4563 0.868406 GTCAGTCCTGCTGTTTTCCG 59.132 55.000 0.00 0.00 45.23 4.30
2928 4564 1.239347 GGTCAGTCCTGCTGTTTTCC 58.761 55.000 0.00 0.00 45.23 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.