Multiple sequence alignment - TraesCS4A01G236100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G236100 chr4A 100.000 6473 0 0 1 6473 544886198 544892670 0.000000e+00 11954.0
1 TraesCS4A01G236100 chr4A 96.907 97 2 1 2005 2100 537598005 537597909 1.870000e-35 161.0
2 TraesCS4A01G236100 chr4D 93.417 4147 163 45 2090 6205 51797594 51793527 0.000000e+00 6045.0
3 TraesCS4A01G236100 chr4D 93.003 1572 61 28 1 1533 51799735 51798174 0.000000e+00 2248.0
4 TraesCS4A01G236100 chr4D 93.249 474 21 3 1536 2005 51798062 51797596 0.000000e+00 688.0
5 TraesCS4A01G236100 chr4D 87.654 243 28 2 5955 6195 491395823 491395581 1.370000e-71 281.0
6 TraesCS4A01G236100 chr4B 95.895 2485 93 3 3064 5541 76046278 76043796 0.000000e+00 4015.0
7 TraesCS4A01G236100 chr4B 92.443 2051 87 29 1 2005 76049207 76047179 0.000000e+00 2867.0
8 TraesCS4A01G236100 chr4B 90.879 921 48 13 2090 2997 76047177 76046280 0.000000e+00 1203.0
9 TraesCS4A01G236100 chr4B 93.151 292 12 5 5578 5862 76043793 76043503 7.760000e-114 422.0
10 TraesCS4A01G236100 chr4B 89.610 231 22 2 5957 6187 601188695 601188923 6.350000e-75 292.0
11 TraesCS4A01G236100 chr4B 92.727 110 4 4 1980 2089 668489808 668489913 8.690000e-34 156.0
12 TraesCS4A01G236100 chr6B 90.498 221 18 3 5969 6188 701069438 701069220 8.210000e-74 289.0
13 TraesCS4A01G236100 chr6B 90.045 221 19 3 5969 6188 701071243 701071025 3.820000e-72 283.0
14 TraesCS4A01G236100 chr6B 88.511 235 21 4 5957 6188 528908295 528908526 4.940000e-71 279.0
15 TraesCS4A01G236100 chr6B 88.085 235 24 3 5957 6188 670019737 670019970 6.390000e-70 276.0
16 TraesCS4A01G236100 chr6B 92.523 107 7 1 1996 2102 65452494 65452599 1.120000e-32 152.0
17 TraesCS4A01G236100 chr5B 90.045 221 19 3 5968 6188 557956230 557956013 3.820000e-72 283.0
18 TraesCS4A01G236100 chr5B 86.598 97 12 1 6259 6355 669663818 669663913 8.880000e-19 106.0
19 TraesCS4A01G236100 chr5B 82.418 91 14 2 2902 2991 91929857 91929946 1.940000e-10 78.7
20 TraesCS4A01G236100 chr7B 88.511 235 22 4 5957 6188 561319276 561319508 4.940000e-71 279.0
21 TraesCS4A01G236100 chr7B 87.629 97 11 1 6259 6355 86223599 86223504 1.910000e-20 111.0
22 TraesCS4A01G236100 chr1B 88.462 234 22 5 5957 6188 4475380 4475610 1.780000e-70 278.0
23 TraesCS4A01G236100 chr1B 91.892 111 5 4 1980 2089 525678831 525678724 1.120000e-32 152.0
24 TraesCS4A01G236100 chr2A 100.000 90 0 0 2001 2090 133985103 133985014 4.010000e-37 167.0
25 TraesCS4A01G236100 chr2A 95.876 97 4 0 2004 2100 777289167 777289263 2.420000e-34 158.0
26 TraesCS4A01G236100 chr2A 89.474 57 3 2 6268 6321 674162936 674162880 1.160000e-07 69.4
27 TraesCS4A01G236100 chr3B 89.147 129 8 5 2003 2130 188484164 188484041 8.690000e-34 156.0
28 TraesCS4A01G236100 chrUn 90.083 121 8 4 1971 2090 8111418 8111535 3.130000e-33 154.0
29 TraesCS4A01G236100 chr1A 93.396 106 4 3 1985 2089 115948120 115948017 3.130000e-33 154.0
30 TraesCS4A01G236100 chr5D 84.146 82 12 1 2903 2983 84868355 84868436 1.940000e-10 78.7
31 TraesCS4A01G236100 chr2D 88.710 62 4 2 6262 6321 448650220 448650160 9.000000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G236100 chr4A 544886198 544892670 6472 False 11954.000000 11954 100.0000 1 6473 1 chr4A.!!$F1 6472
1 TraesCS4A01G236100 chr4D 51793527 51799735 6208 True 2993.666667 6045 93.2230 1 6205 3 chr4D.!!$R2 6204
2 TraesCS4A01G236100 chr4B 76043503 76049207 5704 True 2126.750000 4015 93.0920 1 5862 4 chr4B.!!$R1 5861
3 TraesCS4A01G236100 chr6B 701069220 701071243 2023 True 286.000000 289 90.2715 5969 6188 2 chr6B.!!$R1 219

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
613 624 0.031616 CTGCCCCTTACTCCTCTCCT 60.032 60.000 0.00 0.00 0.00 3.69 F
1423 1475 0.811281 GTTTCCTGGGCTCCATTTCG 59.189 55.000 0.00 0.00 30.82 3.46 F
1734 1895 0.761187 TGCCTAGCATGCCTCCTAAG 59.239 55.000 15.66 2.57 31.71 2.18 F
2679 2856 0.042731 AGCAGGAAGGTAGTGGCCTA 59.957 55.000 3.32 0.00 38.03 3.93 F
2735 2913 0.453390 GCGGCCTGGAATTCTTTCAG 59.547 55.000 5.23 4.43 33.23 3.02 F
3035 3216 0.946528 TGCTGTGACATTGCAGTGAC 59.053 50.000 16.98 10.54 35.33 3.67 F
3036 3217 0.946528 GCTGTGACATTGCAGTGACA 59.053 50.000 16.98 13.29 34.50 3.58 F
4857 5046 1.211703 TGTCTGCTGTTGGGAGTTTGA 59.788 47.619 0.00 0.00 34.83 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 1896 1.114627 ACGATGCATCACAGCTAGGA 58.885 50.000 25.70 0.00 34.99 2.94 R
2440 2617 1.139058 GGCAGATTACCGGATCACACT 59.861 52.381 9.46 0.00 0.00 3.55 R
3012 3193 2.030628 CACTGCAATGTCACAGCATGAA 60.031 45.455 0.00 0.00 39.72 2.57 R
3927 4116 0.622136 TCTCAGACCATGGCAGCAAT 59.378 50.000 13.04 0.00 0.00 3.56 R
4465 4654 4.192317 GTTGCTGGTATAAGAAGGTCTGG 58.808 47.826 0.00 0.00 0.00 3.86 R
4866 5055 3.018856 CTCCTGTAAGCATGGAATTGCA 58.981 45.455 0.79 0.79 45.23 4.08 R
5045 5234 2.210013 TCACTCCTGGCAGAAGCGT 61.210 57.895 17.94 4.12 43.41 5.07 R
6400 6601 0.032130 CACTATCCCCGTCACCGATG 59.968 60.000 0.00 0.00 35.63 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 131 2.987149 CTGTAGCACGAGGTAAAGTGTG 59.013 50.000 1.51 0.00 40.26 3.82
128 132 2.624364 TGTAGCACGAGGTAAAGTGTGA 59.376 45.455 0.00 0.00 40.26 3.58
129 133 3.257375 TGTAGCACGAGGTAAAGTGTGAT 59.743 43.478 0.00 0.00 40.26 3.06
186 190 5.002516 CCCGGTATTACAGTTTTTGTGGTA 58.997 41.667 0.00 0.00 41.10 3.25
606 617 1.078143 CAGGTGCTGCCCCTTACTC 60.078 63.158 0.00 0.00 38.26 2.59
613 624 0.031616 CTGCCCCTTACTCCTCTCCT 60.032 60.000 0.00 0.00 0.00 3.69
829 840 3.829601 AGTTGTTGGTGTTGTCCTTTCAA 59.170 39.130 0.00 0.00 0.00 2.69
830 841 4.466015 AGTTGTTGGTGTTGTCCTTTCAAT 59.534 37.500 0.00 0.00 0.00 2.57
831 842 4.383850 TGTTGGTGTTGTCCTTTCAATG 57.616 40.909 0.00 0.00 0.00 2.82
883 898 3.444388 GGTCAAGTGTTGTGGGTTTGTTA 59.556 43.478 0.00 0.00 0.00 2.41
891 906 1.677052 TGTGGGTTTGTTAAGGCGTTC 59.323 47.619 0.00 0.00 0.00 3.95
986 1009 2.163211 GAGGAGATTTGCAGGCTGTTTC 59.837 50.000 17.16 8.03 0.00 2.78
1069 1093 3.316308 GGGCAGCAATATCAGGTTAGTTG 59.684 47.826 0.00 0.00 0.00 3.16
1076 1100 6.604795 AGCAATATCAGGTTAGTTGATTTGCT 59.395 34.615 19.67 19.67 43.90 3.91
1118 1142 8.689972 AGTTTCTTCAGATTCTGTTGACATTTT 58.310 29.630 13.23 0.00 32.61 1.82
1175 1223 2.604174 CCTGTTGGACGACGGCAAC 61.604 63.158 1.63 6.05 34.57 4.17
1186 1235 1.535015 CGACGGCAACAATTTTGTGGT 60.535 47.619 0.00 0.00 41.31 4.16
1189 1238 1.596727 CGGCAACAATTTTGTGGTTGG 59.403 47.619 0.00 0.00 41.31 3.77
1190 1239 1.946081 GGCAACAATTTTGTGGTTGGG 59.054 47.619 0.00 0.00 41.31 4.12
1194 1243 4.261114 GCAACAATTTTGTGGTTGGGATTG 60.261 41.667 0.00 0.00 41.31 2.67
1207 1256 3.251479 TGGGATTGTGAGATCTGTTCG 57.749 47.619 0.00 0.00 0.00 3.95
1216 1265 3.084786 TGAGATCTGTTCGCTTGAGAGA 58.915 45.455 0.00 0.00 0.00 3.10
1217 1266 3.128415 TGAGATCTGTTCGCTTGAGAGAG 59.872 47.826 0.00 0.00 0.00 3.20
1228 1277 3.935203 CGCTTGAGAGAGATTTGGCTTTA 59.065 43.478 0.00 0.00 0.00 1.85
1272 1323 1.342074 TGCCAGAATAGAGGGGATCG 58.658 55.000 0.00 0.00 0.00 3.69
1304 1355 9.323985 TGGTTGTTTCTTGAAATAAATTCCAAG 57.676 29.630 6.81 0.00 37.22 3.61
1423 1475 0.811281 GTTTCCTGGGCTCCATTTCG 59.189 55.000 0.00 0.00 30.82 3.46
1525 1577 1.386412 GCGCAAAACGTCCAATCATTG 59.614 47.619 0.30 0.00 46.11 2.82
1734 1895 0.761187 TGCCTAGCATGCCTCCTAAG 59.239 55.000 15.66 2.57 31.71 2.18
1735 1896 0.761802 GCCTAGCATGCCTCCTAAGT 59.238 55.000 15.66 0.00 0.00 2.24
1736 1897 1.270571 GCCTAGCATGCCTCCTAAGTC 60.271 57.143 15.66 0.00 0.00 3.01
1737 1898 1.346068 CCTAGCATGCCTCCTAAGTCC 59.654 57.143 15.66 0.00 0.00 3.85
1738 1899 2.324541 CTAGCATGCCTCCTAAGTCCT 58.675 52.381 15.66 0.00 0.00 3.85
1739 1900 2.478872 AGCATGCCTCCTAAGTCCTA 57.521 50.000 15.66 0.00 0.00 2.94
1740 1901 2.324541 AGCATGCCTCCTAAGTCCTAG 58.675 52.381 15.66 0.00 0.00 3.02
2005 2170 5.165961 AGTTCTCTTTGCCTTGCTATGTA 57.834 39.130 0.00 0.00 0.00 2.29
2006 2171 4.938226 AGTTCTCTTTGCCTTGCTATGTAC 59.062 41.667 0.00 0.00 0.00 2.90
2007 2172 4.826274 TCTCTTTGCCTTGCTATGTACT 57.174 40.909 0.00 0.00 0.00 2.73
2008 2173 4.759782 TCTCTTTGCCTTGCTATGTACTC 58.240 43.478 0.00 0.00 0.00 2.59
2009 2174 3.873910 TCTTTGCCTTGCTATGTACTCC 58.126 45.455 0.00 0.00 0.00 3.85
2010 2175 2.710096 TTGCCTTGCTATGTACTCCC 57.290 50.000 0.00 0.00 0.00 4.30
2011 2176 1.879575 TGCCTTGCTATGTACTCCCT 58.120 50.000 0.00 0.00 0.00 4.20
2012 2177 1.762957 TGCCTTGCTATGTACTCCCTC 59.237 52.381 0.00 0.00 0.00 4.30
2013 2178 2.043227 GCCTTGCTATGTACTCCCTCT 58.957 52.381 0.00 0.00 0.00 3.69
2014 2179 2.224161 GCCTTGCTATGTACTCCCTCTG 60.224 54.545 0.00 0.00 0.00 3.35
2015 2180 3.034635 CCTTGCTATGTACTCCCTCTGT 58.965 50.000 0.00 0.00 0.00 3.41
2016 2181 4.215908 CCTTGCTATGTACTCCCTCTGTA 58.784 47.826 0.00 0.00 0.00 2.74
2017 2182 4.649674 CCTTGCTATGTACTCCCTCTGTAA 59.350 45.833 0.00 0.00 0.00 2.41
2018 2183 5.128827 CCTTGCTATGTACTCCCTCTGTAAA 59.871 44.000 0.00 0.00 0.00 2.01
2019 2184 5.593679 TGCTATGTACTCCCTCTGTAAAC 57.406 43.478 0.00 0.00 0.00 2.01
2020 2185 5.269991 TGCTATGTACTCCCTCTGTAAACT 58.730 41.667 0.00 0.00 0.00 2.66
2021 2186 6.429151 TGCTATGTACTCCCTCTGTAAACTA 58.571 40.000 0.00 0.00 0.00 2.24
2022 2187 6.893554 TGCTATGTACTCCCTCTGTAAACTAA 59.106 38.462 0.00 0.00 0.00 2.24
2023 2188 7.563924 TGCTATGTACTCCCTCTGTAAACTAAT 59.436 37.037 0.00 0.00 0.00 1.73
2024 2189 9.075678 GCTATGTACTCCCTCTGTAAACTAATA 57.924 37.037 0.00 0.00 0.00 0.98
2031 2196 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2032 2197 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2033 2198 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
2034 2199 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
2035 2200 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
2083 2248 9.490379 AAATGCTCTTATATTAGTTTACGGAGG 57.510 33.333 0.00 0.00 0.00 4.30
2084 2249 6.989659 TGCTCTTATATTAGTTTACGGAGGG 58.010 40.000 0.00 0.00 0.00 4.30
2085 2250 6.779049 TGCTCTTATATTAGTTTACGGAGGGA 59.221 38.462 0.00 0.00 0.00 4.20
2086 2251 7.039923 TGCTCTTATATTAGTTTACGGAGGGAG 60.040 40.741 0.00 0.00 0.00 4.30
2087 2252 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
2088 2253 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2158 2323 9.894783 ATTACTTGTCATACGCAATACTACTAG 57.105 33.333 0.00 0.00 0.00 2.57
2159 2324 7.563888 ACTTGTCATACGCAATACTACTAGA 57.436 36.000 0.00 0.00 0.00 2.43
2160 2325 7.416022 ACTTGTCATACGCAATACTACTAGAC 58.584 38.462 0.00 0.00 0.00 2.59
2282 2447 3.973305 AGTGGGTTGGGATTTTGTTTCAT 59.027 39.130 0.00 0.00 0.00 2.57
2283 2448 4.411869 AGTGGGTTGGGATTTTGTTTCATT 59.588 37.500 0.00 0.00 0.00 2.57
2284 2449 5.104151 AGTGGGTTGGGATTTTGTTTCATTT 60.104 36.000 0.00 0.00 0.00 2.32
2285 2450 5.592282 GTGGGTTGGGATTTTGTTTCATTTT 59.408 36.000 0.00 0.00 0.00 1.82
2286 2451 6.096141 GTGGGTTGGGATTTTGTTTCATTTTT 59.904 34.615 0.00 0.00 0.00 1.94
2287 2452 6.319911 TGGGTTGGGATTTTGTTTCATTTTTC 59.680 34.615 0.00 0.00 0.00 2.29
2288 2453 6.319911 GGGTTGGGATTTTGTTTCATTTTTCA 59.680 34.615 0.00 0.00 0.00 2.69
2311 2476 7.673180 TCATTTTTCATTTGAGCTCTCCATTT 58.327 30.769 16.19 0.00 0.00 2.32
2312 2477 8.805175 TCATTTTTCATTTGAGCTCTCCATTTA 58.195 29.630 16.19 0.00 0.00 1.40
2341 2518 5.798125 TTTGTGGATTTACTTTGCCATCA 57.202 34.783 0.00 0.00 32.26 3.07
2391 2568 6.086222 GTGCAACATATGTGACGATCTTTTT 58.914 36.000 9.63 0.00 36.32 1.94
2428 2605 2.890311 CCCACTTTTATGAACTGTGCCA 59.110 45.455 0.00 0.00 0.00 4.92
2438 2615 1.680735 GAACTGTGCCATTTCCACACA 59.319 47.619 0.00 0.00 41.77 3.72
2439 2616 1.999648 ACTGTGCCATTTCCACACAT 58.000 45.000 0.00 0.00 42.94 3.21
2440 2617 3.153369 ACTGTGCCATTTCCACACATA 57.847 42.857 0.00 0.00 42.94 2.29
2461 2638 0.468226 TGTGATCCGGTAATCTGCCC 59.532 55.000 0.00 0.00 0.00 5.36
2473 2650 3.784511 AATCTGCCCATATCCTCACAG 57.215 47.619 0.00 0.00 0.00 3.66
2512 2689 5.268118 TCTCTTGTAATGATGTGCGAGAT 57.732 39.130 0.00 0.00 0.00 2.75
2519 2696 2.284263 TGATGTGCGAGATGTGAGTC 57.716 50.000 0.00 0.00 0.00 3.36
2522 2699 2.354109 TGTGCGAGATGTGAGTCTTC 57.646 50.000 0.00 0.00 0.00 2.87
2590 2767 3.577805 ACCATCTGCCCCTTGTATAAC 57.422 47.619 0.00 0.00 0.00 1.89
2599 2776 3.072476 GCCCCTTGTATAACTCATGCCTA 59.928 47.826 0.00 0.00 0.00 3.93
2676 2853 1.222113 GGAGCAGGAAGGTAGTGGC 59.778 63.158 0.00 0.00 0.00 5.01
2677 2854 1.222113 GAGCAGGAAGGTAGTGGCC 59.778 63.158 0.00 0.00 0.00 5.36
2678 2855 1.229658 AGCAGGAAGGTAGTGGCCT 60.230 57.895 3.32 0.00 41.41 5.19
2679 2856 0.042731 AGCAGGAAGGTAGTGGCCTA 59.957 55.000 3.32 0.00 38.03 3.93
2680 2857 0.466124 GCAGGAAGGTAGTGGCCTAG 59.534 60.000 3.32 0.00 38.03 3.02
2681 2858 1.867363 CAGGAAGGTAGTGGCCTAGT 58.133 55.000 3.32 0.00 38.03 2.57
2682 2859 1.482593 CAGGAAGGTAGTGGCCTAGTG 59.517 57.143 3.32 0.00 38.03 2.74
2683 2860 0.831307 GGAAGGTAGTGGCCTAGTGG 59.169 60.000 3.32 0.00 38.03 4.00
2695 2872 4.709886 GTGGCCTAGTGGGAAAATGTAAAT 59.290 41.667 3.32 0.00 37.23 1.40
2735 2913 0.453390 GCGGCCTGGAATTCTTTCAG 59.547 55.000 5.23 4.43 33.23 3.02
2741 2919 4.327680 GCCTGGAATTCTTTCAGTACTGT 58.672 43.478 21.99 0.91 33.23 3.55
2772 2950 6.182507 TCTGTTGTGGTTATGTAAAGACCT 57.817 37.500 0.00 0.00 34.52 3.85
2785 2963 9.527157 TTATGTAAAGACCTTCAATTCCAATGA 57.473 29.630 0.00 0.00 0.00 2.57
2815 2993 7.226523 ACCTGTTTTATTTGAAAATTGACCTGC 59.773 33.333 0.00 0.00 0.00 4.85
2899 3080 2.790448 TGACGCTAGTGTTGTGTTAACG 59.210 45.455 10.89 0.00 0.00 3.18
2955 3136 5.386060 ACAGACATCGTTATCTCCATAGGA 58.614 41.667 0.00 0.00 0.00 2.94
2985 3166 8.169268 GTCAAGTTTTATCTTCACAAGGTATCG 58.831 37.037 0.00 0.00 0.00 2.92
3026 3207 2.624364 TGTTGCTTTCATGCTGTGACAT 59.376 40.909 0.00 0.00 36.32 3.06
3027 3208 3.068448 TGTTGCTTTCATGCTGTGACATT 59.932 39.130 0.00 0.00 36.32 2.71
3028 3209 3.291809 TGCTTTCATGCTGTGACATTG 57.708 42.857 0.00 0.00 36.32 2.82
3029 3210 1.990563 GCTTTCATGCTGTGACATTGC 59.009 47.619 0.00 0.00 36.32 3.56
3030 3211 2.608506 GCTTTCATGCTGTGACATTGCA 60.609 45.455 1.90 1.90 41.13 4.08
3031 3212 3.242518 CTTTCATGCTGTGACATTGCAG 58.757 45.455 5.74 0.30 40.18 4.41
3032 3213 1.900245 TCATGCTGTGACATTGCAGT 58.100 45.000 5.74 0.00 40.18 4.40
3033 3214 1.538075 TCATGCTGTGACATTGCAGTG 59.462 47.619 7.79 7.79 40.18 3.66
3034 3215 1.538075 CATGCTGTGACATTGCAGTGA 59.462 47.619 16.98 0.00 40.18 3.41
3035 3216 0.946528 TGCTGTGACATTGCAGTGAC 59.053 50.000 16.98 10.54 35.33 3.67
3036 3217 0.946528 GCTGTGACATTGCAGTGACA 59.053 50.000 16.98 13.29 34.50 3.58
3164 3345 6.119536 TGGTTTATATGACTAGCCTTTGGTG 58.880 40.000 0.00 0.00 0.00 4.17
3165 3346 5.008712 GGTTTATATGACTAGCCTTTGGTGC 59.991 44.000 0.00 0.00 0.00 5.01
3220 3401 4.285863 ACAAGATGACCCCTTTTTGTTCA 58.714 39.130 0.00 0.00 0.00 3.18
3316 3503 3.325135 AGAACTTGGTGGGTCTTCTACAG 59.675 47.826 0.00 0.00 0.00 2.74
3326 3513 3.006537 GGGTCTTCTACAGTGCACAGTTA 59.993 47.826 20.59 6.61 0.00 2.24
3449 3636 7.926555 GCTGTCTATGTTTAGCAATTACTCCTA 59.073 37.037 0.00 0.00 36.24 2.94
3501 3690 6.743575 ACTGAAGGAACTGTTTATACATGC 57.256 37.500 0.00 0.00 40.86 4.06
3502 3691 6.237901 ACTGAAGGAACTGTTTATACATGCA 58.762 36.000 0.00 0.00 40.86 3.96
3712 3901 6.770286 ATATATCTGACATTCCTGGTGGTT 57.230 37.500 0.00 0.00 34.23 3.67
3741 3930 5.207033 GCATTTGAAATTTGTGCCAAGTTC 58.793 37.500 0.00 0.00 0.00 3.01
3921 4110 6.311445 ACTCAATCATAGTTCTGCAAAGTACG 59.689 38.462 0.00 0.00 0.00 3.67
3927 4116 4.054780 AGTTCTGCAAAGTACGAAGTCA 57.945 40.909 0.00 0.00 43.93 3.41
4266 4455 1.923356 TTGGTTCCCTTGAAGATGCC 58.077 50.000 0.00 0.00 0.00 4.40
4404 4593 1.471119 CATGCTTGCTGGAATCTGGT 58.529 50.000 0.00 0.00 0.00 4.00
4465 4654 2.191128 ACTGGATGGTGCTTCAGTTC 57.809 50.000 0.00 0.00 37.18 3.01
4519 4708 1.830086 TGGCGTGTATAATGTCGACG 58.170 50.000 11.62 0.00 33.74 5.12
4857 5046 1.211703 TGTCTGCTGTTGGGAGTTTGA 59.788 47.619 0.00 0.00 34.83 2.69
4866 5055 5.221244 GCTGTTGGGAGTTTGAAACTTACAT 60.221 40.000 12.37 0.00 43.03 2.29
5045 5234 0.174389 GAGCAAGTCCGAGCATCAGA 59.826 55.000 0.00 0.00 33.17 3.27
5085 5274 0.539051 CTGGAGCCGACCTTTCATCT 59.461 55.000 0.00 0.00 0.00 2.90
5094 5283 3.005554 CGACCTTTCATCTGCTGTTCAT 58.994 45.455 0.00 0.00 0.00 2.57
5115 5304 2.461695 TCGCTTCTTCCCAGAGAGAAT 58.538 47.619 0.00 0.00 0.00 2.40
5136 5325 1.805945 CAACTCGTACGGCAGCTCC 60.806 63.158 16.52 0.00 0.00 4.70
5160 5349 2.653766 GCGGCCACAACAACAACG 60.654 61.111 2.24 0.00 0.00 4.10
5259 5448 3.768922 AGCGAGAGGAGCAGCACC 61.769 66.667 0.00 0.00 37.01 5.01
5362 5551 0.035630 CAAGCTCTGGTCTGGGAAGG 60.036 60.000 0.00 0.00 0.00 3.46
5370 5559 4.373116 TCTGGGAAGGCGCACGTC 62.373 66.667 10.83 6.50 33.03 4.34
5484 5673 1.078848 GTCCTAGTGGCTGGTGCTG 60.079 63.158 0.00 0.00 39.59 4.41
5569 5758 7.064609 CGAGAGTAGCAATCTTAAAATGTGGAA 59.935 37.037 0.00 0.00 0.00 3.53
5576 5765 9.461312 AGCAATCTTAAAATGTGGAATACTACA 57.539 29.630 0.00 0.00 41.38 2.74
5846 6044 6.883217 ACTGTGAATTATCTGTTGATGAAGCT 59.117 34.615 0.00 0.00 34.32 3.74
5854 6052 8.985315 TTATCTGTTGATGAAGCTATTGGAAT 57.015 30.769 0.00 0.00 34.32 3.01
5855 6053 7.893124 ATCTGTTGATGAAGCTATTGGAATT 57.107 32.000 0.00 0.00 0.00 2.17
5856 6054 7.707624 TCTGTTGATGAAGCTATTGGAATTT 57.292 32.000 0.00 0.00 0.00 1.82
5857 6055 8.806429 TCTGTTGATGAAGCTATTGGAATTTA 57.194 30.769 0.00 0.00 0.00 1.40
5858 6056 9.412460 TCTGTTGATGAAGCTATTGGAATTTAT 57.588 29.630 0.00 0.00 0.00 1.40
5859 6057 9.459640 CTGTTGATGAAGCTATTGGAATTTATG 57.540 33.333 0.00 0.00 0.00 1.90
5860 6058 8.970020 TGTTGATGAAGCTATTGGAATTTATGT 58.030 29.630 0.00 0.00 0.00 2.29
5861 6059 9.241317 GTTGATGAAGCTATTGGAATTTATGTG 57.759 33.333 0.00 0.00 0.00 3.21
5862 6060 8.523915 TGATGAAGCTATTGGAATTTATGTGT 57.476 30.769 0.00 0.00 0.00 3.72
5863 6061 8.970020 TGATGAAGCTATTGGAATTTATGTGTT 58.030 29.630 0.00 0.00 0.00 3.32
5864 6062 9.241317 GATGAAGCTATTGGAATTTATGTGTTG 57.759 33.333 0.00 0.00 0.00 3.33
5865 6063 8.347004 TGAAGCTATTGGAATTTATGTGTTGA 57.653 30.769 0.00 0.00 0.00 3.18
5866 6064 8.970020 TGAAGCTATTGGAATTTATGTGTTGAT 58.030 29.630 0.00 0.00 0.00 2.57
5867 6065 9.241317 GAAGCTATTGGAATTTATGTGTTGATG 57.759 33.333 0.00 0.00 0.00 3.07
5868 6066 8.523915 AGCTATTGGAATTTATGTGTTGATGA 57.476 30.769 0.00 0.00 0.00 2.92
5869 6067 8.970020 AGCTATTGGAATTTATGTGTTGATGAA 58.030 29.630 0.00 0.00 0.00 2.57
5870 6068 9.241317 GCTATTGGAATTTATGTGTTGATGAAG 57.759 33.333 0.00 0.00 0.00 3.02
5871 6069 9.241317 CTATTGGAATTTATGTGTTGATGAAGC 57.759 33.333 0.00 0.00 0.00 3.86
5872 6070 6.839124 TGGAATTTATGTGTTGATGAAGCT 57.161 33.333 0.00 0.00 0.00 3.74
5873 6071 7.936496 TGGAATTTATGTGTTGATGAAGCTA 57.064 32.000 0.00 0.00 0.00 3.32
5874 6072 8.523915 TGGAATTTATGTGTTGATGAAGCTAT 57.476 30.769 0.00 0.00 0.00 2.97
5875 6073 8.970020 TGGAATTTATGTGTTGATGAAGCTATT 58.030 29.630 0.00 0.00 0.00 1.73
5876 6074 9.241317 GGAATTTATGTGTTGATGAAGCTATTG 57.759 33.333 0.00 0.00 0.00 1.90
5877 6075 9.241317 GAATTTATGTGTTGATGAAGCTATTGG 57.759 33.333 0.00 0.00 0.00 3.16
5878 6076 7.936496 TTTATGTGTTGATGAAGCTATTGGA 57.064 32.000 0.00 0.00 0.00 3.53
5879 6077 7.936496 TTATGTGTTGATGAAGCTATTGGAA 57.064 32.000 0.00 0.00 0.00 3.53
5895 6093 6.490040 GCTATTGGAATTTAGGTGGAGCATTA 59.510 38.462 0.00 0.00 0.00 1.90
5905 6103 7.681939 TTAGGTGGAGCATTAGTTACTTTTG 57.318 36.000 0.00 0.00 0.00 2.44
5907 6105 6.068670 AGGTGGAGCATTAGTTACTTTTGTT 58.931 36.000 0.00 0.00 0.00 2.83
5909 6107 7.722285 AGGTGGAGCATTAGTTACTTTTGTTTA 59.278 33.333 0.00 0.00 0.00 2.01
5910 6108 8.520351 GGTGGAGCATTAGTTACTTTTGTTTAT 58.480 33.333 0.00 0.00 0.00 1.40
5911 6109 9.556030 GTGGAGCATTAGTTACTTTTGTTTATC 57.444 33.333 0.00 0.00 0.00 1.75
5912 6110 9.515226 TGGAGCATTAGTTACTTTTGTTTATCT 57.485 29.630 0.00 0.00 0.00 1.98
5913 6111 9.774742 GGAGCATTAGTTACTTTTGTTTATCTG 57.225 33.333 0.00 0.00 0.00 2.90
5938 6136 6.276832 AGTGCAAATCTAAGCATTCACATT 57.723 33.333 0.00 0.00 43.44 2.71
6005 6203 9.267084 ACAAACATTTACAAAAGTTTCAAGTGT 57.733 25.926 5.36 0.00 37.61 3.55
6047 6245 3.953712 TCACATTTCTAGAAGGCGTGA 57.046 42.857 20.83 20.83 0.00 4.35
6149 6348 6.716628 GCCTTATAGGGATGTGATTTCATGAA 59.283 38.462 3.38 3.38 35.37 2.57
6152 6351 9.736414 CTTATAGGGATGTGATTTCATGAAGAT 57.264 33.333 8.41 5.63 0.00 2.40
6200 6401 9.434420 TTTGTCAATGTTTCACAAAAAGATTCT 57.566 25.926 0.00 0.00 37.14 2.40
6206 6407 7.985634 TGTTTCACAAAAAGATTCTGTTAGC 57.014 32.000 0.00 0.00 0.00 3.09
6207 6408 7.542890 TGTTTCACAAAAAGATTCTGTTAGCA 58.457 30.769 0.00 0.00 0.00 3.49
6208 6409 7.487829 TGTTTCACAAAAAGATTCTGTTAGCAC 59.512 33.333 0.00 0.00 0.00 4.40
6209 6410 6.072112 TCACAAAAAGATTCTGTTAGCACC 57.928 37.500 0.00 0.00 0.00 5.01
6210 6411 5.592282 TCACAAAAAGATTCTGTTAGCACCA 59.408 36.000 0.00 0.00 0.00 4.17
6211 6412 5.916883 CACAAAAAGATTCTGTTAGCACCAG 59.083 40.000 0.00 0.00 0.00 4.00
6212 6413 5.594317 ACAAAAAGATTCTGTTAGCACCAGT 59.406 36.000 0.00 0.00 0.00 4.00
6213 6414 6.096846 ACAAAAAGATTCTGTTAGCACCAGTT 59.903 34.615 0.00 0.00 0.00 3.16
6214 6415 6.715347 AAAAGATTCTGTTAGCACCAGTTT 57.285 33.333 0.00 0.00 0.00 2.66
6215 6416 5.948992 AAGATTCTGTTAGCACCAGTTTC 57.051 39.130 0.00 0.00 0.00 2.78
6216 6417 4.973168 AGATTCTGTTAGCACCAGTTTCA 58.027 39.130 0.00 0.00 0.00 2.69
6217 6418 5.376625 AGATTCTGTTAGCACCAGTTTCAA 58.623 37.500 0.00 0.00 0.00 2.69
6218 6419 5.471456 AGATTCTGTTAGCACCAGTTTCAAG 59.529 40.000 0.00 0.00 0.00 3.02
6219 6420 4.150897 TCTGTTAGCACCAGTTTCAAGT 57.849 40.909 0.00 0.00 0.00 3.16
6220 6421 4.127171 TCTGTTAGCACCAGTTTCAAGTC 58.873 43.478 0.00 0.00 0.00 3.01
6221 6422 4.130118 CTGTTAGCACCAGTTTCAAGTCT 58.870 43.478 0.00 0.00 0.00 3.24
6222 6423 5.069914 TCTGTTAGCACCAGTTTCAAGTCTA 59.930 40.000 0.00 0.00 0.00 2.59
6223 6424 5.676552 TGTTAGCACCAGTTTCAAGTCTAA 58.323 37.500 0.00 0.00 0.00 2.10
6224 6425 6.296026 TGTTAGCACCAGTTTCAAGTCTAAT 58.704 36.000 0.00 0.00 0.00 1.73
6225 6426 6.426937 TGTTAGCACCAGTTTCAAGTCTAATC 59.573 38.462 0.00 0.00 0.00 1.75
6226 6427 4.973168 AGCACCAGTTTCAAGTCTAATCA 58.027 39.130 0.00 0.00 0.00 2.57
6227 6428 5.376625 AGCACCAGTTTCAAGTCTAATCAA 58.623 37.500 0.00 0.00 0.00 2.57
6228 6429 5.827797 AGCACCAGTTTCAAGTCTAATCAAA 59.172 36.000 0.00 0.00 0.00 2.69
6229 6430 5.915196 GCACCAGTTTCAAGTCTAATCAAAC 59.085 40.000 0.00 0.00 0.00 2.93
6230 6431 6.459573 GCACCAGTTTCAAGTCTAATCAAACA 60.460 38.462 0.00 0.00 30.74 2.83
6231 6432 7.134815 CACCAGTTTCAAGTCTAATCAAACAG 58.865 38.462 0.00 0.00 30.74 3.16
6232 6433 6.828785 ACCAGTTTCAAGTCTAATCAAACAGT 59.171 34.615 0.00 0.00 30.74 3.55
6233 6434 7.012421 ACCAGTTTCAAGTCTAATCAAACAGTC 59.988 37.037 0.00 0.00 30.74 3.51
6234 6435 7.012327 CCAGTTTCAAGTCTAATCAAACAGTCA 59.988 37.037 0.00 0.00 30.74 3.41
6235 6436 8.562892 CAGTTTCAAGTCTAATCAAACAGTCAT 58.437 33.333 0.00 0.00 30.74 3.06
6236 6437 9.125026 AGTTTCAAGTCTAATCAAACAGTCATT 57.875 29.630 0.00 0.00 30.74 2.57
6237 6438 9.387123 GTTTCAAGTCTAATCAAACAGTCATTC 57.613 33.333 0.00 0.00 0.00 2.67
6238 6439 7.672983 TCAAGTCTAATCAAACAGTCATTCC 57.327 36.000 0.00 0.00 0.00 3.01
6239 6440 7.223584 TCAAGTCTAATCAAACAGTCATTCCA 58.776 34.615 0.00 0.00 0.00 3.53
6240 6441 7.884877 TCAAGTCTAATCAAACAGTCATTCCAT 59.115 33.333 0.00 0.00 0.00 3.41
6241 6442 7.856145 AGTCTAATCAAACAGTCATTCCATC 57.144 36.000 0.00 0.00 0.00 3.51
6242 6443 7.397221 AGTCTAATCAAACAGTCATTCCATCA 58.603 34.615 0.00 0.00 0.00 3.07
6243 6444 7.884877 AGTCTAATCAAACAGTCATTCCATCAA 59.115 33.333 0.00 0.00 0.00 2.57
6244 6445 8.180267 GTCTAATCAAACAGTCATTCCATCAAG 58.820 37.037 0.00 0.00 0.00 3.02
6245 6446 6.906157 AATCAAACAGTCATTCCATCAAGT 57.094 33.333 0.00 0.00 0.00 3.16
6246 6447 6.906157 ATCAAACAGTCATTCCATCAAGTT 57.094 33.333 0.00 0.00 0.00 2.66
6247 6448 6.713762 TCAAACAGTCATTCCATCAAGTTT 57.286 33.333 0.00 0.00 0.00 2.66
6248 6449 7.111247 TCAAACAGTCATTCCATCAAGTTTT 57.889 32.000 0.00 0.00 0.00 2.43
6249 6450 8.231692 TCAAACAGTCATTCCATCAAGTTTTA 57.768 30.769 0.00 0.00 0.00 1.52
6250 6451 8.859090 TCAAACAGTCATTCCATCAAGTTTTAT 58.141 29.630 0.00 0.00 0.00 1.40
6251 6452 9.132521 CAAACAGTCATTCCATCAAGTTTTATC 57.867 33.333 0.00 0.00 0.00 1.75
6252 6453 7.396540 ACAGTCATTCCATCAAGTTTTATCC 57.603 36.000 0.00 0.00 0.00 2.59
6253 6454 6.947733 ACAGTCATTCCATCAAGTTTTATCCA 59.052 34.615 0.00 0.00 0.00 3.41
6254 6455 7.451255 ACAGTCATTCCATCAAGTTTTATCCAA 59.549 33.333 0.00 0.00 0.00 3.53
6255 6456 8.306038 CAGTCATTCCATCAAGTTTTATCCAAA 58.694 33.333 0.00 0.00 0.00 3.28
6256 6457 8.869109 AGTCATTCCATCAAGTTTTATCCAAAA 58.131 29.630 0.00 0.00 0.00 2.44
6268 6469 7.062749 GTTTTATCCAAAACCCTTTTCCTCT 57.937 36.000 2.30 0.00 45.15 3.69
6269 6470 8.185506 GTTTTATCCAAAACCCTTTTCCTCTA 57.814 34.615 2.30 0.00 45.15 2.43
6270 6471 8.304596 GTTTTATCCAAAACCCTTTTCCTCTAG 58.695 37.037 2.30 0.00 45.15 2.43
6271 6472 4.382386 TCCAAAACCCTTTTCCTCTAGG 57.618 45.455 0.00 0.00 0.00 3.02
6278 6479 3.698289 CCCTTTTCCTCTAGGGTTTTCC 58.302 50.000 0.00 0.00 45.12 3.13
6280 6481 4.538891 CCCTTTTCCTCTAGGGTTTTCCTA 59.461 45.833 0.00 0.00 45.98 2.94
6281 6482 5.498393 CCTTTTCCTCTAGGGTTTTCCTAC 58.502 45.833 0.00 0.00 45.98 3.18
6282 6483 5.013808 CCTTTTCCTCTAGGGTTTTCCTACA 59.986 44.000 0.00 0.00 45.98 2.74
6283 6484 5.757099 TTTCCTCTAGGGTTTTCCTACAG 57.243 43.478 0.00 0.00 45.98 2.74
6284 6485 4.415224 TCCTCTAGGGTTTTCCTACAGT 57.585 45.455 0.00 0.00 45.98 3.55
6285 6486 4.351127 TCCTCTAGGGTTTTCCTACAGTC 58.649 47.826 0.00 0.00 45.98 3.51
6286 6487 3.451540 CCTCTAGGGTTTTCCTACAGTCC 59.548 52.174 0.00 0.00 45.98 3.85
6287 6488 4.094476 CTCTAGGGTTTTCCTACAGTCCA 58.906 47.826 0.00 0.00 45.98 4.02
6288 6489 3.836562 TCTAGGGTTTTCCTACAGTCCAC 59.163 47.826 0.00 0.00 45.98 4.02
6289 6490 1.703513 AGGGTTTTCCTACAGTCCACC 59.296 52.381 0.00 0.00 45.98 4.61
6290 6491 1.703513 GGGTTTTCCTACAGTCCACCT 59.296 52.381 0.00 0.00 40.46 4.00
6291 6492 2.107726 GGGTTTTCCTACAGTCCACCTT 59.892 50.000 0.00 0.00 40.46 3.50
6292 6493 3.436035 GGGTTTTCCTACAGTCCACCTTT 60.436 47.826 0.00 0.00 40.46 3.11
6293 6494 4.212716 GGTTTTCCTACAGTCCACCTTTT 58.787 43.478 0.00 0.00 36.94 2.27
6294 6495 4.277672 GGTTTTCCTACAGTCCACCTTTTC 59.722 45.833 0.00 0.00 36.94 2.29
6295 6496 3.782656 TTCCTACAGTCCACCTTTTCC 57.217 47.619 0.00 0.00 0.00 3.13
6296 6497 2.986050 TCCTACAGTCCACCTTTTCCT 58.014 47.619 0.00 0.00 0.00 3.36
6297 6498 2.904434 TCCTACAGTCCACCTTTTCCTC 59.096 50.000 0.00 0.00 0.00 3.71
6298 6499 2.907042 CCTACAGTCCACCTTTTCCTCT 59.093 50.000 0.00 0.00 0.00 3.69
6299 6500 2.938956 ACAGTCCACCTTTTCCTCTG 57.061 50.000 0.00 0.00 0.00 3.35
6300 6501 1.421646 ACAGTCCACCTTTTCCTCTGG 59.578 52.381 0.00 0.00 0.00 3.86
6301 6502 0.402121 AGTCCACCTTTTCCTCTGGC 59.598 55.000 0.00 0.00 0.00 4.85
6302 6503 0.955919 GTCCACCTTTTCCTCTGGCG 60.956 60.000 0.00 0.00 0.00 5.69
6303 6504 1.675641 CCACCTTTTCCTCTGGCGG 60.676 63.158 0.00 0.00 0.00 6.13
6304 6505 2.034221 ACCTTTTCCTCTGGCGGC 59.966 61.111 0.00 0.00 0.00 6.53
6305 6506 3.127533 CCTTTTCCTCTGGCGGCG 61.128 66.667 0.51 0.51 0.00 6.46
6306 6507 3.804193 CTTTTCCTCTGGCGGCGC 61.804 66.667 26.17 26.17 0.00 6.53
6323 6524 4.742201 CCGCCAGAGTCCACGTGG 62.742 72.222 29.26 29.26 0.00 4.94
6324 6525 3.991051 CGCCAGAGTCCACGTGGT 61.991 66.667 32.74 16.38 36.34 4.16
6325 6526 2.426023 GCCAGAGTCCACGTGGTT 59.574 61.111 32.74 22.39 36.34 3.67
6326 6527 1.961277 GCCAGAGTCCACGTGGTTG 60.961 63.158 32.74 23.90 36.34 3.77
6327 6528 1.961277 CCAGAGTCCACGTGGTTGC 60.961 63.158 32.74 22.82 36.34 4.17
6328 6529 1.069765 CAGAGTCCACGTGGTTGCT 59.930 57.895 32.74 26.59 36.34 3.91
6329 6530 0.317160 CAGAGTCCACGTGGTTGCTA 59.683 55.000 32.74 11.90 36.34 3.49
6330 6531 0.317479 AGAGTCCACGTGGTTGCTAC 59.683 55.000 32.74 22.86 36.34 3.58
6331 6532 1.006571 AGTCCACGTGGTTGCTACG 60.007 57.895 32.74 6.15 46.31 3.51
6337 6538 3.491581 CGTGGTTGCTACGTCTTCT 57.508 52.632 0.00 0.00 36.83 2.85
6338 6539 1.337821 CGTGGTTGCTACGTCTTCTC 58.662 55.000 0.00 0.00 36.83 2.87
6339 6540 1.337821 GTGGTTGCTACGTCTTCTCG 58.662 55.000 0.00 0.00 0.00 4.04
6340 6541 0.388134 TGGTTGCTACGTCTTCTCGC 60.388 55.000 0.00 0.00 0.00 5.03
6341 6542 0.109226 GGTTGCTACGTCTTCTCGCT 60.109 55.000 0.00 0.00 0.00 4.93
6342 6543 0.985549 GTTGCTACGTCTTCTCGCTG 59.014 55.000 0.00 0.00 0.00 5.18
6343 6544 0.109272 TTGCTACGTCTTCTCGCTGG 60.109 55.000 0.00 0.00 0.00 4.85
6344 6545 0.958876 TGCTACGTCTTCTCGCTGGA 60.959 55.000 0.00 0.00 0.00 3.86
6345 6546 0.382515 GCTACGTCTTCTCGCTGGAT 59.617 55.000 0.00 0.00 0.00 3.41
6346 6547 1.598430 GCTACGTCTTCTCGCTGGATC 60.598 57.143 0.00 0.00 0.00 3.36
6347 6548 1.944024 CTACGTCTTCTCGCTGGATCT 59.056 52.381 0.00 0.00 0.00 2.75
6348 6549 0.736053 ACGTCTTCTCGCTGGATCTC 59.264 55.000 0.00 0.00 0.00 2.75
6349 6550 0.316607 CGTCTTCTCGCTGGATCTCG 60.317 60.000 0.00 0.00 0.00 4.04
6350 6551 0.593773 GTCTTCTCGCTGGATCTCGC 60.594 60.000 0.00 0.00 0.00 5.03
6351 6552 1.299773 CTTCTCGCTGGATCTCGCC 60.300 63.158 0.00 0.00 0.00 5.54
6352 6553 2.997621 CTTCTCGCTGGATCTCGCCG 62.998 65.000 0.00 0.00 0.00 6.46
6353 6554 4.637489 CTCGCTGGATCTCGCCGG 62.637 72.222 0.00 0.00 37.37 6.13
6364 6565 3.449227 TCGCCGGCGATCAAGTCT 61.449 61.111 45.37 0.00 44.01 3.24
6365 6566 3.257561 CGCCGGCGATCAAGTCTG 61.258 66.667 44.86 10.04 42.83 3.51
6366 6567 3.567797 GCCGGCGATCAAGTCTGC 61.568 66.667 12.58 0.00 0.00 4.26
6367 6568 2.125552 CCGGCGATCAAGTCTGCA 60.126 61.111 9.30 0.00 0.00 4.41
6368 6569 1.741401 CCGGCGATCAAGTCTGCAA 60.741 57.895 9.30 0.00 0.00 4.08
6369 6570 1.699656 CCGGCGATCAAGTCTGCAAG 61.700 60.000 9.30 0.00 0.00 4.01
6370 6571 0.737367 CGGCGATCAAGTCTGCAAGA 60.737 55.000 0.00 0.00 43.69 3.02
6380 6581 2.671145 TCTGCAAGACGGGATCAGT 58.329 52.632 0.00 0.00 38.67 3.41
6381 6582 0.247460 TCTGCAAGACGGGATCAGTG 59.753 55.000 0.00 0.00 38.67 3.66
6382 6583 0.247460 CTGCAAGACGGGATCAGTGA 59.753 55.000 0.00 0.00 34.07 3.41
6383 6584 0.904649 TGCAAGACGGGATCAGTGAT 59.095 50.000 4.98 4.98 0.00 3.06
6384 6585 1.134699 TGCAAGACGGGATCAGTGATC 60.135 52.381 22.69 22.69 38.25 2.92
6385 6586 1.137872 GCAAGACGGGATCAGTGATCT 59.862 52.381 27.89 12.34 38.91 2.75
6386 6587 2.819115 CAAGACGGGATCAGTGATCTG 58.181 52.381 27.89 22.69 38.91 2.90
6387 6588 1.407936 AGACGGGATCAGTGATCTGG 58.592 55.000 27.89 21.95 41.59 3.86
6388 6589 0.390860 GACGGGATCAGTGATCTGGG 59.609 60.000 27.89 19.91 41.59 4.45
6389 6590 1.070445 CGGGATCAGTGATCTGGGC 59.930 63.158 27.89 14.11 41.59 5.36
6390 6591 1.070445 GGGATCAGTGATCTGGGCG 59.930 63.158 27.89 0.00 41.59 6.13
6391 6592 1.596477 GGATCAGTGATCTGGGCGC 60.596 63.158 27.89 10.37 41.59 6.53
6392 6593 1.144716 GATCAGTGATCTGGGCGCA 59.855 57.895 23.33 2.47 41.59 6.09
6393 6594 0.250209 GATCAGTGATCTGGGCGCAT 60.250 55.000 23.33 0.00 41.59 4.73
6394 6595 0.534427 ATCAGTGATCTGGGCGCATG 60.534 55.000 10.83 0.00 41.59 4.06
6395 6596 2.184830 CAGTGATCTGGGCGCATGG 61.185 63.158 10.83 0.00 37.97 3.66
6396 6597 2.190313 GTGATCTGGGCGCATGGA 59.810 61.111 10.83 3.52 0.00 3.41
6397 6598 1.890979 GTGATCTGGGCGCATGGAG 60.891 63.158 10.83 0.00 0.00 3.86
6398 6599 2.065789 TGATCTGGGCGCATGGAGA 61.066 57.895 10.83 4.41 0.00 3.71
6399 6600 1.146930 GATCTGGGCGCATGGAGAA 59.853 57.895 10.83 0.00 0.00 2.87
6400 6601 1.153086 ATCTGGGCGCATGGAGAAC 60.153 57.895 10.83 0.00 0.00 3.01
6401 6602 1.913951 ATCTGGGCGCATGGAGAACA 61.914 55.000 10.83 0.00 0.00 3.18
6402 6603 1.452651 CTGGGCGCATGGAGAACAT 60.453 57.895 10.83 0.00 41.57 2.71
6403 6604 1.442526 CTGGGCGCATGGAGAACATC 61.443 60.000 10.83 0.00 37.84 3.06
6404 6605 2.537560 GGGCGCATGGAGAACATCG 61.538 63.158 10.83 0.00 37.84 3.84
6405 6606 2.537560 GGCGCATGGAGAACATCGG 61.538 63.158 10.83 0.00 37.84 4.18
6406 6607 1.815421 GCGCATGGAGAACATCGGT 60.815 57.895 0.30 0.00 37.84 4.69
6407 6608 2.009108 CGCATGGAGAACATCGGTG 58.991 57.895 0.00 0.00 37.84 4.94
6408 6609 0.460109 CGCATGGAGAACATCGGTGA 60.460 55.000 0.65 0.00 37.84 4.02
6409 6610 1.009829 GCATGGAGAACATCGGTGAC 58.990 55.000 0.65 0.00 37.84 3.67
6421 6622 4.368003 GGTGACGGGGATAGTGGA 57.632 61.111 0.00 0.00 0.00 4.02
6422 6623 2.125178 GGTGACGGGGATAGTGGAG 58.875 63.158 0.00 0.00 0.00 3.86
6423 6624 1.442148 GTGACGGGGATAGTGGAGC 59.558 63.158 0.00 0.00 0.00 4.70
6424 6625 2.125326 TGACGGGGATAGTGGAGCG 61.125 63.158 0.00 0.00 0.00 5.03
6425 6626 2.838225 ACGGGGATAGTGGAGCGG 60.838 66.667 0.00 0.00 0.00 5.52
6426 6627 3.616721 CGGGGATAGTGGAGCGGG 61.617 72.222 0.00 0.00 0.00 6.13
6427 6628 3.242291 GGGGATAGTGGAGCGGGG 61.242 72.222 0.00 0.00 0.00 5.73
6428 6629 3.242291 GGGATAGTGGAGCGGGGG 61.242 72.222 0.00 0.00 0.00 5.40
6442 6643 3.492068 GGGGGTTCGAAGGAAGGT 58.508 61.111 0.00 0.00 31.49 3.50
6443 6644 1.298993 GGGGGTTCGAAGGAAGGTC 59.701 63.158 0.00 0.00 31.49 3.85
6444 6645 1.486145 GGGGGTTCGAAGGAAGGTCA 61.486 60.000 0.00 0.00 31.49 4.02
6445 6646 0.036294 GGGGTTCGAAGGAAGGTCAG 60.036 60.000 0.00 0.00 31.49 3.51
6446 6647 0.036294 GGGTTCGAAGGAAGGTCAGG 60.036 60.000 0.00 0.00 31.49 3.86
6447 6648 0.036294 GGTTCGAAGGAAGGTCAGGG 60.036 60.000 0.00 0.00 31.49 4.45
6448 6649 0.036294 GTTCGAAGGAAGGTCAGGGG 60.036 60.000 0.00 0.00 31.49 4.79
6449 6650 0.178915 TTCGAAGGAAGGTCAGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
6450 6651 0.042731 TCGAAGGAAGGTCAGGGGAT 59.957 55.000 0.00 0.00 0.00 3.85
6451 6652 1.289830 TCGAAGGAAGGTCAGGGGATA 59.710 52.381 0.00 0.00 0.00 2.59
6452 6653 1.689273 CGAAGGAAGGTCAGGGGATAG 59.311 57.143 0.00 0.00 0.00 2.08
6453 6654 2.050918 GAAGGAAGGTCAGGGGATAGG 58.949 57.143 0.00 0.00 0.00 2.57
6454 6655 1.330155 AGGAAGGTCAGGGGATAGGA 58.670 55.000 0.00 0.00 0.00 2.94
6455 6656 1.657162 AGGAAGGTCAGGGGATAGGAA 59.343 52.381 0.00 0.00 0.00 3.36
6456 6657 2.050918 GGAAGGTCAGGGGATAGGAAG 58.949 57.143 0.00 0.00 0.00 3.46
6457 6658 2.629909 GGAAGGTCAGGGGATAGGAAGT 60.630 54.545 0.00 0.00 0.00 3.01
6458 6659 3.374984 GGAAGGTCAGGGGATAGGAAGTA 60.375 52.174 0.00 0.00 0.00 2.24
6459 6660 3.621682 AGGTCAGGGGATAGGAAGTAG 57.378 52.381 0.00 0.00 0.00 2.57
6460 6661 1.972075 GGTCAGGGGATAGGAAGTAGC 59.028 57.143 0.00 0.00 0.00 3.58
6461 6662 1.614413 GTCAGGGGATAGGAAGTAGCG 59.386 57.143 0.00 0.00 0.00 4.26
6462 6663 0.969894 CAGGGGATAGGAAGTAGCGG 59.030 60.000 0.00 0.00 0.00 5.52
6463 6664 0.178929 AGGGGATAGGAAGTAGCGGG 60.179 60.000 0.00 0.00 0.00 6.13
6464 6665 1.192803 GGGGATAGGAAGTAGCGGGG 61.193 65.000 0.00 0.00 0.00 5.73
6465 6666 0.178941 GGGATAGGAAGTAGCGGGGA 60.179 60.000 0.00 0.00 0.00 4.81
6466 6667 1.552719 GGGATAGGAAGTAGCGGGGAT 60.553 57.143 0.00 0.00 0.00 3.85
6467 6668 2.292061 GGGATAGGAAGTAGCGGGGATA 60.292 54.545 0.00 0.00 0.00 2.59
6468 6669 3.025262 GGATAGGAAGTAGCGGGGATAG 58.975 54.545 0.00 0.00 0.00 2.08
6469 6670 3.308976 GGATAGGAAGTAGCGGGGATAGA 60.309 52.174 0.00 0.00 0.00 1.98
6470 6671 2.296073 AGGAAGTAGCGGGGATAGAG 57.704 55.000 0.00 0.00 0.00 2.43
6471 6672 1.781529 AGGAAGTAGCGGGGATAGAGA 59.218 52.381 0.00 0.00 0.00 3.10
6472 6673 1.887854 GGAAGTAGCGGGGATAGAGAC 59.112 57.143 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
604 615 2.168106 CTGGATCACACAAGGAGAGGAG 59.832 54.545 0.00 0.00 0.00 3.69
606 617 1.406614 GCTGGATCACACAAGGAGAGG 60.407 57.143 0.00 0.00 0.00 3.69
715 726 3.334054 AGCCCAAGCAGACCTCCC 61.334 66.667 0.00 0.00 43.56 4.30
891 906 0.749454 CCGAATGGGAGCCAAGAAGG 60.749 60.000 0.00 0.00 36.95 3.46
986 1009 0.518636 CTTCATTGTGCCACACCGAG 59.481 55.000 0.00 0.00 32.73 4.63
1069 1093 4.999950 TCTGAGGAAGAACAGAAGCAAATC 59.000 41.667 0.00 0.00 39.68 2.17
1076 1100 5.878406 AGAAACTCTGAGGAAGAACAGAA 57.122 39.130 9.85 0.00 41.58 3.02
1118 1142 5.361285 GGAGAGCAAGGACTAGATGAAGTAA 59.639 44.000 0.00 0.00 0.00 2.24
1132 1156 3.260884 TGGTACTAAACTGGAGAGCAAGG 59.739 47.826 0.00 0.00 0.00 3.61
1166 1214 1.127701 CCACAAAATTGTTGCCGTCG 58.872 50.000 0.00 0.00 39.91 5.12
1169 1217 1.596727 CCAACCACAAAATTGTTGCCG 59.403 47.619 0.00 0.00 39.91 5.69
1175 1223 4.701765 TCACAATCCCAACCACAAAATTG 58.298 39.130 0.00 0.00 0.00 2.32
1186 1235 3.599343 CGAACAGATCTCACAATCCCAA 58.401 45.455 0.00 0.00 0.00 4.12
1189 1238 2.898705 AGCGAACAGATCTCACAATCC 58.101 47.619 0.00 0.00 0.00 3.01
1190 1239 3.928992 TCAAGCGAACAGATCTCACAATC 59.071 43.478 0.00 0.00 0.00 2.67
1194 1243 3.119673 TCTCTCAAGCGAACAGATCTCAC 60.120 47.826 0.00 0.00 0.00 3.51
1207 1256 4.940654 ACTAAAGCCAAATCTCTCTCAAGC 59.059 41.667 0.00 0.00 0.00 4.01
1216 1265 4.770795 AGACGCATACTAAAGCCAAATCT 58.229 39.130 0.00 0.00 0.00 2.40
1217 1266 5.485662 AAGACGCATACTAAAGCCAAATC 57.514 39.130 0.00 0.00 0.00 2.17
1228 1277 1.067846 TGCAGAACGAAGACGCATACT 60.068 47.619 0.00 0.00 43.96 2.12
1304 1355 3.268330 CCCCCTTTAGCGACTTCTTTAC 58.732 50.000 0.00 0.00 0.00 2.01
1423 1475 6.568653 GCTCACATCCTTTTCTTCCTGTTTAC 60.569 42.308 0.00 0.00 0.00 2.01
1629 1790 7.851822 AAATTTAGTTGCTAAACATGACACG 57.148 32.000 0.00 0.00 38.51 4.49
1663 1824 1.133823 AGCAATCCAATCCGCATGGTA 60.134 47.619 0.00 0.00 39.09 3.25
1669 1830 1.745087 TGAGAAAGCAATCCAATCCGC 59.255 47.619 0.00 0.00 0.00 5.54
1734 1895 1.202463 ACGATGCATCACAGCTAGGAC 60.202 52.381 25.70 0.00 34.99 3.85
1735 1896 1.114627 ACGATGCATCACAGCTAGGA 58.885 50.000 25.70 0.00 34.99 2.94
1736 1897 2.800881 TACGATGCATCACAGCTAGG 57.199 50.000 25.70 9.65 34.99 3.02
1737 1898 4.171663 AGATACGATGCATCACAGCTAG 57.828 45.455 25.70 10.36 34.99 3.42
1738 1899 4.037923 TCAAGATACGATGCATCACAGCTA 59.962 41.667 25.70 7.37 34.99 3.32
1739 1900 3.129109 CAAGATACGATGCATCACAGCT 58.871 45.455 25.70 16.89 34.99 4.24
1740 1901 3.060003 GTCAAGATACGATGCATCACAGC 60.060 47.826 25.70 14.96 0.00 4.40
1919 2083 9.686683 ACAAGGTCAATAACTAGCTCAATTATT 57.313 29.630 0.00 0.00 0.00 1.40
1920 2084 9.113838 CACAAGGTCAATAACTAGCTCAATTAT 57.886 33.333 0.00 0.00 0.00 1.28
1921 2085 7.552687 CCACAAGGTCAATAACTAGCTCAATTA 59.447 37.037 0.00 0.00 0.00 1.40
1922 2086 6.375455 CCACAAGGTCAATAACTAGCTCAATT 59.625 38.462 0.00 0.00 0.00 2.32
1924 2088 5.245531 CCACAAGGTCAATAACTAGCTCAA 58.754 41.667 0.00 0.00 0.00 3.02
1954 2119 6.475504 TGAGCTCCAAGAATTCAATCTACAA 58.524 36.000 12.15 0.00 0.00 2.41
2005 2170 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
2006 2171 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
2007 2172 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
2008 2173 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
2009 2174 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
2057 2222 9.490379 CCTCCGTAAACTAATATAAGAGCATTT 57.510 33.333 0.00 0.00 0.00 2.32
2058 2223 8.095169 CCCTCCGTAAACTAATATAAGAGCATT 58.905 37.037 0.00 0.00 0.00 3.56
2059 2224 7.453752 TCCCTCCGTAAACTAATATAAGAGCAT 59.546 37.037 0.00 0.00 0.00 3.79
2060 2225 6.779049 TCCCTCCGTAAACTAATATAAGAGCA 59.221 38.462 0.00 0.00 0.00 4.26
2061 2226 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2062 2227 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2063 2228 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2064 2229 9.071276 TGTACTCCCTCCGTAAACTAATATAAG 57.929 37.037 0.00 0.00 0.00 1.73
2065 2230 8.995027 TGTACTCCCTCCGTAAACTAATATAA 57.005 34.615 0.00 0.00 0.00 0.98
2066 2231 8.995027 TTGTACTCCCTCCGTAAACTAATATA 57.005 34.615 0.00 0.00 0.00 0.86
2067 2232 7.902920 TTGTACTCCCTCCGTAAACTAATAT 57.097 36.000 0.00 0.00 0.00 1.28
2068 2233 7.902920 ATTGTACTCCCTCCGTAAACTAATA 57.097 36.000 0.00 0.00 0.00 0.98
2069 2234 6.803366 ATTGTACTCCCTCCGTAAACTAAT 57.197 37.500 0.00 0.00 0.00 1.73
2070 2235 6.610075 AATTGTACTCCCTCCGTAAACTAA 57.390 37.500 0.00 0.00 0.00 2.24
2071 2236 6.610075 AAATTGTACTCCCTCCGTAAACTA 57.390 37.500 0.00 0.00 0.00 2.24
2072 2237 5.494390 AAATTGTACTCCCTCCGTAAACT 57.506 39.130 0.00 0.00 0.00 2.66
2073 2238 7.854557 AATAAATTGTACTCCCTCCGTAAAC 57.145 36.000 0.00 0.00 0.00 2.01
2074 2239 9.956640 TTAAATAAATTGTACTCCCTCCGTAAA 57.043 29.630 0.00 0.00 0.00 2.01
2076 2241 9.768662 GATTAAATAAATTGTACTCCCTCCGTA 57.231 33.333 0.00 0.00 0.00 4.02
2077 2242 8.269317 TGATTAAATAAATTGTACTCCCTCCGT 58.731 33.333 0.00 0.00 0.00 4.69
2078 2243 8.671384 TGATTAAATAAATTGTACTCCCTCCG 57.329 34.615 0.00 0.00 0.00 4.63
2088 2253 7.706179 CGCAGGACCAATGATTAAATAAATTGT 59.294 33.333 0.00 0.00 0.00 2.71
2146 2311 8.842280 ACTTCACATCTAGTCTAGTAGTATTGC 58.158 37.037 6.77 0.00 0.00 3.56
2151 2316 6.887545 AGCAACTTCACATCTAGTCTAGTAGT 59.112 38.462 6.77 4.33 0.00 2.73
2156 2321 6.014584 TGGAAAGCAACTTCACATCTAGTCTA 60.015 38.462 0.00 0.00 0.00 2.59
2157 2322 5.221722 TGGAAAGCAACTTCACATCTAGTCT 60.222 40.000 0.00 0.00 0.00 3.24
2158 2323 4.997395 TGGAAAGCAACTTCACATCTAGTC 59.003 41.667 0.00 0.00 0.00 2.59
2159 2324 4.757149 GTGGAAAGCAACTTCACATCTAGT 59.243 41.667 0.00 0.00 0.00 2.57
2160 2325 4.756642 TGTGGAAAGCAACTTCACATCTAG 59.243 41.667 0.00 0.00 0.00 2.43
2282 2447 7.986320 TGGAGAGCTCAAATGAAAAATGAAAAA 59.014 29.630 17.77 0.00 0.00 1.94
2283 2448 7.499292 TGGAGAGCTCAAATGAAAAATGAAAA 58.501 30.769 17.77 0.00 0.00 2.29
2284 2449 7.053316 TGGAGAGCTCAAATGAAAAATGAAA 57.947 32.000 17.77 0.00 0.00 2.69
2285 2450 6.653526 TGGAGAGCTCAAATGAAAAATGAA 57.346 33.333 17.77 0.00 0.00 2.57
2286 2451 6.845758 ATGGAGAGCTCAAATGAAAAATGA 57.154 33.333 17.77 0.00 0.00 2.57
2287 2452 7.900782 AAATGGAGAGCTCAAATGAAAAATG 57.099 32.000 17.77 0.00 0.00 2.32
2341 2518 7.652909 CACAAACAATTGGTTACAGATCACAAT 59.347 33.333 8.75 0.00 39.29 2.71
2391 2568 3.857157 GTGGGCCCACTATAATTCTCA 57.143 47.619 42.23 6.58 43.12 3.27
2438 2615 3.006967 GGCAGATTACCGGATCACACTAT 59.993 47.826 9.46 0.00 0.00 2.12
2439 2616 2.364324 GGCAGATTACCGGATCACACTA 59.636 50.000 9.46 0.00 0.00 2.74
2440 2617 1.139058 GGCAGATTACCGGATCACACT 59.861 52.381 9.46 0.00 0.00 3.55
2461 2638 4.478206 AGGTGACAACTGTGAGGATATG 57.522 45.455 0.00 0.00 0.00 1.78
2473 2650 5.066505 ACAAGAGAATGACAAAGGTGACAAC 59.933 40.000 0.00 0.00 33.15 3.32
2512 2689 1.337071 GTCAGGACACGAAGACTCACA 59.663 52.381 0.00 0.00 0.00 3.58
2519 2696 5.066634 ACAGTATATCAGTCAGGACACGAAG 59.933 44.000 1.84 0.00 0.00 3.79
2522 2699 4.902443 ACAGTATATCAGTCAGGACACG 57.098 45.455 1.84 0.00 0.00 4.49
2590 2767 6.537453 ACTAGCATATTACCTAGGCATGAG 57.463 41.667 9.30 4.88 39.60 2.90
2676 2853 5.529800 CCCGTATTTACATTTTCCCACTAGG 59.470 44.000 0.00 0.00 0.00 3.02
2677 2854 5.008316 GCCCGTATTTACATTTTCCCACTAG 59.992 44.000 0.00 0.00 0.00 2.57
2678 2855 4.883006 GCCCGTATTTACATTTTCCCACTA 59.117 41.667 0.00 0.00 0.00 2.74
2679 2856 3.697542 GCCCGTATTTACATTTTCCCACT 59.302 43.478 0.00 0.00 0.00 4.00
2680 2857 3.444388 TGCCCGTATTTACATTTTCCCAC 59.556 43.478 0.00 0.00 0.00 4.61
2681 2858 3.698289 TGCCCGTATTTACATTTTCCCA 58.302 40.909 0.00 0.00 0.00 4.37
2682 2859 4.929819 ATGCCCGTATTTACATTTTCCC 57.070 40.909 0.00 0.00 0.00 3.97
2683 2860 8.120465 CGATATATGCCCGTATTTACATTTTCC 58.880 37.037 0.00 0.00 0.00 3.13
2735 2913 7.492352 ACCACAACAGATCTAAAAACAGTAC 57.508 36.000 0.00 0.00 0.00 2.73
2772 2950 3.833650 ACAGGTGCATCATTGGAATTGAA 59.166 39.130 0.00 0.00 0.00 2.69
2785 2963 8.558700 GTCAATTTTCAAATAAAACAGGTGCAT 58.441 29.630 0.00 0.00 0.00 3.96
2886 3067 4.159857 TGAAAAGCACGTTAACACAACAC 58.840 39.130 6.39 0.00 0.00 3.32
2899 3080 2.615869 TGCAACAAACCTGAAAAGCAC 58.384 42.857 0.00 0.00 0.00 4.40
2955 3136 7.721399 ACCTTGTGAAGATAAAACTTGACATCT 59.279 33.333 0.00 0.00 41.71 2.90
3003 3184 3.068448 TGTCACAGCATGAAAGCAACAAT 59.932 39.130 0.00 0.00 39.72 2.71
3012 3193 2.030628 CACTGCAATGTCACAGCATGAA 60.031 45.455 0.00 0.00 39.72 2.57
3026 3207 5.833406 TTCTTCTCAAAATGTCACTGCAA 57.167 34.783 0.00 0.00 0.00 4.08
3027 3208 6.039605 TGAATTCTTCTCAAAATGTCACTGCA 59.960 34.615 7.05 0.00 0.00 4.41
3028 3209 6.441274 TGAATTCTTCTCAAAATGTCACTGC 58.559 36.000 7.05 0.00 0.00 4.40
3077 3258 6.319911 GGAAAGAGCCTTAGCAATTAGTTCAT 59.680 38.462 0.00 0.00 43.56 2.57
3140 3321 6.119536 CACCAAAGGCTAGTCATATAAACCA 58.880 40.000 0.00 0.00 0.00 3.67
3142 3323 5.588648 TGCACCAAAGGCTAGTCATATAAAC 59.411 40.000 0.00 0.00 0.00 2.01
3164 3345 7.711339 AGTGTAGCTTATAATTAGGTGTTCTGC 59.289 37.037 0.00 0.00 0.00 4.26
3175 3356 9.953565 TTGTCAACCTTAGTGTAGCTTATAATT 57.046 29.630 0.00 0.00 0.00 1.40
3181 3362 5.546621 TCTTGTCAACCTTAGTGTAGCTT 57.453 39.130 0.00 0.00 0.00 3.74
3184 3365 5.869888 GGTCATCTTGTCAACCTTAGTGTAG 59.130 44.000 0.00 0.00 0.00 2.74
3199 3380 4.935352 TGAACAAAAAGGGGTCATCTTG 57.065 40.909 0.00 0.00 0.00 3.02
3346 3533 6.799512 CCATTAGGCAATTTCTAGGTTGAAG 58.200 40.000 7.36 0.00 0.00 3.02
3385 3572 5.594926 CTTGAAAGCACTTCATGTTTCCTT 58.405 37.500 2.46 0.00 43.64 3.36
3419 3606 6.674694 AATTGCTAAACATAGACAGCTGAG 57.325 37.500 23.35 4.69 35.05 3.35
3459 3646 8.702438 CCTTCAGTTGCAAAATTACAATACAAG 58.298 33.333 0.00 0.00 0.00 3.16
3471 3658 4.799564 AACAGTTCCTTCAGTTGCAAAA 57.200 36.364 0.00 0.00 0.00 2.44
3554 3743 8.980481 ATATAATAAAGTAAAGCTGCACTGGT 57.020 30.769 1.02 0.00 0.00 4.00
3712 3901 4.751098 GGCACAAATTTCAAATGCAGAAGA 59.249 37.500 12.67 0.00 38.05 2.87
3921 4110 1.133790 GACCATGGCAGCAATGACTTC 59.866 52.381 13.04 1.12 0.00 3.01
3927 4116 0.622136 TCTCAGACCATGGCAGCAAT 59.378 50.000 13.04 0.00 0.00 3.56
4404 4593 6.525578 ACCAAGTTATCACGATAAGACTCA 57.474 37.500 0.00 0.00 34.27 3.41
4465 4654 4.192317 GTTGCTGGTATAAGAAGGTCTGG 58.808 47.826 0.00 0.00 0.00 3.86
4519 4708 4.635223 TGCTCTACTATTGCCATGATCAC 58.365 43.478 0.00 0.00 0.00 3.06
4810 4999 8.894768 ACTAACTGGAAATAGAAGATGTATGC 57.105 34.615 0.00 0.00 0.00 3.14
4823 5012 6.054860 ACAGCAGACATACTAACTGGAAAT 57.945 37.500 0.00 0.00 36.73 2.17
4857 5046 5.410355 AGCATGGAATTGCATGTAAGTTT 57.590 34.783 32.23 14.34 45.23 2.66
4866 5055 3.018856 CTCCTGTAAGCATGGAATTGCA 58.981 45.455 0.79 0.79 45.23 4.08
5045 5234 2.210013 TCACTCCTGGCAGAAGCGT 61.210 57.895 17.94 4.12 43.41 5.07
5085 5274 1.806542 GGAAGAAGCGAATGAACAGCA 59.193 47.619 0.00 0.00 0.00 4.41
5094 5283 1.924731 TCTCTCTGGGAAGAAGCGAA 58.075 50.000 0.00 0.00 0.00 4.70
5115 5304 2.048597 CTGCCGTACGAGTTGCCA 60.049 61.111 18.76 2.99 0.00 4.92
5136 5325 3.357079 GTTGTGGCCGCTGACCTG 61.357 66.667 18.96 0.00 0.00 4.00
5145 5334 0.248866 CTTCCGTTGTTGTTGTGGCC 60.249 55.000 0.00 0.00 0.00 5.36
5160 5349 2.761767 GACTCCACTACCTTCCTCTTCC 59.238 54.545 0.00 0.00 0.00 3.46
5259 5448 1.150827 TCTTGTTGATGTCGCTGCTG 58.849 50.000 0.00 0.00 0.00 4.41
5362 5551 3.764049 GTTCTCACCGACGTGCGC 61.764 66.667 0.00 0.00 40.04 6.09
5370 5559 0.179161 CCGAGCTACTGTTCTCACCG 60.179 60.000 9.40 0.00 0.00 4.94
5373 5562 1.540267 GTGTCCGAGCTACTGTTCTCA 59.460 52.381 9.40 0.00 0.00 3.27
5382 5571 2.046988 TCCGACGTGTCCGAGCTA 60.047 61.111 0.00 0.00 37.88 3.32
5415 5604 1.192803 ACTTCACCTCCTCCGGGTTC 61.193 60.000 0.00 0.00 34.44 3.62
5484 5673 5.171147 ACTACGTGTGCTATGATACTGTC 57.829 43.478 0.00 0.00 0.00 3.51
5563 5752 4.562757 GGCAGTCAGTTGTAGTATTCCACA 60.563 45.833 0.00 0.00 0.00 4.17
5569 5758 3.173965 ACAGGGCAGTCAGTTGTAGTAT 58.826 45.455 0.00 0.00 0.00 2.12
5576 5765 2.031163 GCGACAGGGCAGTCAGTT 59.969 61.111 9.50 0.00 38.43 3.16
5625 5816 1.549170 CTCTACGGGCTACACCAGTTT 59.451 52.381 0.00 0.00 45.59 2.66
5743 5938 6.041523 GGATTTTCTCTACTCTGCCAGTCTAT 59.958 42.308 0.00 0.00 36.43 1.98
5744 5939 5.361285 GGATTTTCTCTACTCTGCCAGTCTA 59.639 44.000 0.00 0.00 36.43 2.59
5794 5992 5.824624 CCAGGCAGTATGTATGAACTGAATT 59.175 40.000 6.65 0.00 44.79 2.17
5846 6044 8.970020 AGCTTCATCAACACATAAATTCCAATA 58.030 29.630 0.00 0.00 0.00 1.90
5854 6052 7.936496 TCCAATAGCTTCATCAACACATAAA 57.064 32.000 0.00 0.00 0.00 1.40
5855 6053 7.936496 TTCCAATAGCTTCATCAACACATAA 57.064 32.000 0.00 0.00 0.00 1.90
5856 6054 8.523915 AATTCCAATAGCTTCATCAACACATA 57.476 30.769 0.00 0.00 0.00 2.29
5857 6055 7.414222 AATTCCAATAGCTTCATCAACACAT 57.586 32.000 0.00 0.00 0.00 3.21
5858 6056 6.839124 AATTCCAATAGCTTCATCAACACA 57.161 33.333 0.00 0.00 0.00 3.72
5859 6057 7.917505 CCTAAATTCCAATAGCTTCATCAACAC 59.082 37.037 0.00 0.00 0.00 3.32
5860 6058 7.615365 ACCTAAATTCCAATAGCTTCATCAACA 59.385 33.333 0.00 0.00 0.00 3.33
5861 6059 7.917505 CACCTAAATTCCAATAGCTTCATCAAC 59.082 37.037 0.00 0.00 0.00 3.18
5862 6060 7.068593 CCACCTAAATTCCAATAGCTTCATCAA 59.931 37.037 0.00 0.00 0.00 2.57
5863 6061 6.547141 CCACCTAAATTCCAATAGCTTCATCA 59.453 38.462 0.00 0.00 0.00 3.07
5864 6062 6.772716 TCCACCTAAATTCCAATAGCTTCATC 59.227 38.462 0.00 0.00 0.00 2.92
5865 6063 6.672593 TCCACCTAAATTCCAATAGCTTCAT 58.327 36.000 0.00 0.00 0.00 2.57
5866 6064 6.073447 TCCACCTAAATTCCAATAGCTTCA 57.927 37.500 0.00 0.00 0.00 3.02
5867 6065 5.009110 GCTCCACCTAAATTCCAATAGCTTC 59.991 44.000 0.00 0.00 0.00 3.86
5868 6066 4.889995 GCTCCACCTAAATTCCAATAGCTT 59.110 41.667 0.00 0.00 0.00 3.74
5869 6067 4.079787 TGCTCCACCTAAATTCCAATAGCT 60.080 41.667 0.00 0.00 0.00 3.32
5870 6068 4.207165 TGCTCCACCTAAATTCCAATAGC 58.793 43.478 0.00 0.00 0.00 2.97
5871 6069 6.966534 AATGCTCCACCTAAATTCCAATAG 57.033 37.500 0.00 0.00 0.00 1.73
5872 6070 7.582719 ACTAATGCTCCACCTAAATTCCAATA 58.417 34.615 0.00 0.00 0.00 1.90
5873 6071 6.435164 ACTAATGCTCCACCTAAATTCCAAT 58.565 36.000 0.00 0.00 0.00 3.16
5874 6072 5.826643 ACTAATGCTCCACCTAAATTCCAA 58.173 37.500 0.00 0.00 0.00 3.53
5875 6073 5.450818 ACTAATGCTCCACCTAAATTCCA 57.549 39.130 0.00 0.00 0.00 3.53
5876 6074 7.054751 AGTAACTAATGCTCCACCTAAATTCC 58.945 38.462 0.00 0.00 0.00 3.01
5877 6075 8.507524 AAGTAACTAATGCTCCACCTAAATTC 57.492 34.615 0.00 0.00 0.00 2.17
5878 6076 8.879427 AAAGTAACTAATGCTCCACCTAAATT 57.121 30.769 0.00 0.00 0.00 1.82
5879 6077 8.739972 CAAAAGTAACTAATGCTCCACCTAAAT 58.260 33.333 0.00 0.00 0.00 1.40
5895 6093 8.220755 TGCACTTCAGATAAACAAAAGTAACT 57.779 30.769 0.00 0.00 0.00 2.24
5905 6103 7.530010 TGCTTAGATTTGCACTTCAGATAAAC 58.470 34.615 0.00 0.00 33.94 2.01
5907 6105 7.870509 ATGCTTAGATTTGCACTTCAGATAA 57.129 32.000 0.00 0.00 42.26 1.75
5909 6107 6.376299 TGAATGCTTAGATTTGCACTTCAGAT 59.624 34.615 0.00 0.00 42.26 2.90
5910 6108 5.706833 TGAATGCTTAGATTTGCACTTCAGA 59.293 36.000 0.00 0.00 42.26 3.27
5911 6109 5.798934 GTGAATGCTTAGATTTGCACTTCAG 59.201 40.000 0.00 0.00 42.26 3.02
5912 6110 5.241285 TGTGAATGCTTAGATTTGCACTTCA 59.759 36.000 0.00 0.00 42.26 3.02
5913 6111 5.702865 TGTGAATGCTTAGATTTGCACTTC 58.297 37.500 0.00 0.00 42.26 3.01
5914 6112 5.710513 TGTGAATGCTTAGATTTGCACTT 57.289 34.783 0.00 0.00 42.26 3.16
5915 6113 5.909621 ATGTGAATGCTTAGATTTGCACT 57.090 34.783 0.00 0.00 42.26 4.40
5938 6136 4.377839 TTTTTGTGAACAATCCGAAGCA 57.622 36.364 0.00 0.00 35.55 3.91
5975 6173 8.818141 TGAAACTTTTGTAAATGTTTGTCACA 57.182 26.923 19.55 11.84 42.58 3.58
5976 6174 9.739786 CTTGAAACTTTTGTAAATGTTTGTCAC 57.260 29.630 19.55 10.13 42.58 3.67
5977 6175 9.482627 ACTTGAAACTTTTGTAAATGTTTGTCA 57.517 25.926 19.55 12.76 42.58 3.58
5979 6177 9.267084 ACACTTGAAACTTTTGTAAATGTTTGT 57.733 25.926 19.55 12.15 42.58 2.83
5988 6186 7.715265 TTTGCAAACACTTGAAACTTTTGTA 57.285 28.000 8.05 0.00 34.14 2.41
6005 6203 5.987953 TGATTCCATGACGAATTTTTGCAAA 59.012 32.000 8.05 8.05 32.56 3.68
6123 6322 5.645056 TGAAATCACATCCCTATAAGGCA 57.355 39.130 0.00 0.00 32.73 4.75
6195 6396 5.239525 ACTTGAAACTGGTGCTAACAGAATC 59.760 40.000 8.00 6.26 39.24 2.52
6200 6401 4.150897 AGACTTGAAACTGGTGCTAACA 57.849 40.909 0.00 0.00 0.00 2.41
6205 6406 5.689383 TTGATTAGACTTGAAACTGGTGC 57.311 39.130 0.00 0.00 0.00 5.01
6206 6407 7.026631 TGTTTGATTAGACTTGAAACTGGTG 57.973 36.000 0.00 0.00 0.00 4.17
6207 6408 6.828785 ACTGTTTGATTAGACTTGAAACTGGT 59.171 34.615 0.00 0.00 32.71 4.00
6208 6409 7.012327 TGACTGTTTGATTAGACTTGAAACTGG 59.988 37.037 0.00 0.00 32.71 4.00
6209 6410 7.919690 TGACTGTTTGATTAGACTTGAAACTG 58.080 34.615 0.00 0.00 33.89 3.16
6210 6411 8.682936 ATGACTGTTTGATTAGACTTGAAACT 57.317 30.769 0.00 0.00 0.00 2.66
6211 6412 9.387123 GAATGACTGTTTGATTAGACTTGAAAC 57.613 33.333 0.00 0.00 0.00 2.78
6212 6413 8.567948 GGAATGACTGTTTGATTAGACTTGAAA 58.432 33.333 0.00 0.00 0.00 2.69
6213 6414 7.719193 TGGAATGACTGTTTGATTAGACTTGAA 59.281 33.333 0.00 0.00 0.00 2.69
6214 6415 7.223584 TGGAATGACTGTTTGATTAGACTTGA 58.776 34.615 0.00 0.00 0.00 3.02
6215 6416 7.439157 TGGAATGACTGTTTGATTAGACTTG 57.561 36.000 0.00 0.00 0.00 3.16
6216 6417 7.884877 TGATGGAATGACTGTTTGATTAGACTT 59.115 33.333 0.00 0.00 0.00 3.01
6217 6418 7.397221 TGATGGAATGACTGTTTGATTAGACT 58.603 34.615 0.00 0.00 0.00 3.24
6218 6419 7.615582 TGATGGAATGACTGTTTGATTAGAC 57.384 36.000 0.00 0.00 0.00 2.59
6219 6420 7.884877 ACTTGATGGAATGACTGTTTGATTAGA 59.115 33.333 0.00 0.00 0.00 2.10
6220 6421 8.048534 ACTTGATGGAATGACTGTTTGATTAG 57.951 34.615 0.00 0.00 0.00 1.73
6221 6422 8.408043 AACTTGATGGAATGACTGTTTGATTA 57.592 30.769 0.00 0.00 0.00 1.75
6222 6423 6.906157 ACTTGATGGAATGACTGTTTGATT 57.094 33.333 0.00 0.00 0.00 2.57
6223 6424 6.906157 AACTTGATGGAATGACTGTTTGAT 57.094 33.333 0.00 0.00 0.00 2.57
6224 6425 6.713762 AAACTTGATGGAATGACTGTTTGA 57.286 33.333 0.00 0.00 0.00 2.69
6225 6426 9.132521 GATAAAACTTGATGGAATGACTGTTTG 57.867 33.333 0.00 0.00 0.00 2.93
6226 6427 8.306761 GGATAAAACTTGATGGAATGACTGTTT 58.693 33.333 0.00 0.00 0.00 2.83
6227 6428 7.451255 TGGATAAAACTTGATGGAATGACTGTT 59.549 33.333 0.00 0.00 0.00 3.16
6228 6429 6.947733 TGGATAAAACTTGATGGAATGACTGT 59.052 34.615 0.00 0.00 0.00 3.55
6229 6430 7.395190 TGGATAAAACTTGATGGAATGACTG 57.605 36.000 0.00 0.00 0.00 3.51
6230 6431 8.421249 TTTGGATAAAACTTGATGGAATGACT 57.579 30.769 0.00 0.00 0.00 3.41
6245 6446 7.453439 CCTAGAGGAAAAGGGTTTTGGATAAAA 59.547 37.037 0.00 0.00 37.39 1.52
6246 6447 6.951778 CCTAGAGGAAAAGGGTTTTGGATAAA 59.048 38.462 0.00 0.00 37.39 1.40
6247 6448 6.490492 CCTAGAGGAAAAGGGTTTTGGATAA 58.510 40.000 0.00 0.00 37.39 1.75
6248 6449 5.044402 CCCTAGAGGAAAAGGGTTTTGGATA 60.044 44.000 0.00 0.00 46.45 2.59
6249 6450 4.264397 CCCTAGAGGAAAAGGGTTTTGGAT 60.264 45.833 0.00 0.00 46.45 3.41
6250 6451 3.075432 CCCTAGAGGAAAAGGGTTTTGGA 59.925 47.826 0.00 0.00 46.45 3.53
6251 6452 3.431415 CCCTAGAGGAAAAGGGTTTTGG 58.569 50.000 0.00 0.00 46.45 3.28
6258 6459 4.659529 AGGAAAACCCTAGAGGAAAAGG 57.340 45.455 0.00 0.00 45.48 3.11
6268 6469 2.908351 GGTGGACTGTAGGAAAACCCTA 59.092 50.000 0.00 0.00 45.48 3.53
6270 6471 1.703513 AGGTGGACTGTAGGAAAACCC 59.296 52.381 0.00 0.00 0.00 4.11
6271 6472 3.503800 AAGGTGGACTGTAGGAAAACC 57.496 47.619 0.00 0.00 0.00 3.27
6272 6473 4.277672 GGAAAAGGTGGACTGTAGGAAAAC 59.722 45.833 0.00 0.00 0.00 2.43
6273 6474 4.167307 AGGAAAAGGTGGACTGTAGGAAAA 59.833 41.667 0.00 0.00 0.00 2.29
6274 6475 3.720002 AGGAAAAGGTGGACTGTAGGAAA 59.280 43.478 0.00 0.00 0.00 3.13
6275 6476 3.323775 AGGAAAAGGTGGACTGTAGGAA 58.676 45.455 0.00 0.00 0.00 3.36
6276 6477 2.904434 GAGGAAAAGGTGGACTGTAGGA 59.096 50.000 0.00 0.00 0.00 2.94
6277 6478 2.907042 AGAGGAAAAGGTGGACTGTAGG 59.093 50.000 0.00 0.00 0.00 3.18
6278 6479 3.307059 CCAGAGGAAAAGGTGGACTGTAG 60.307 52.174 0.00 0.00 31.04 2.74
6279 6480 2.637872 CCAGAGGAAAAGGTGGACTGTA 59.362 50.000 0.00 0.00 31.04 2.74
6280 6481 1.421646 CCAGAGGAAAAGGTGGACTGT 59.578 52.381 0.00 0.00 31.04 3.55
6281 6482 1.884067 GCCAGAGGAAAAGGTGGACTG 60.884 57.143 0.00 0.00 31.04 3.51
6282 6483 0.402121 GCCAGAGGAAAAGGTGGACT 59.598 55.000 0.00 0.00 31.04 3.85
6283 6484 0.955919 CGCCAGAGGAAAAGGTGGAC 60.956 60.000 0.00 0.00 31.04 4.02
6284 6485 1.374947 CGCCAGAGGAAAAGGTGGA 59.625 57.895 0.00 0.00 31.04 4.02
6285 6486 1.675641 CCGCCAGAGGAAAAGGTGG 60.676 63.158 0.00 0.00 45.68 4.61
6286 6487 2.335712 GCCGCCAGAGGAAAAGGTG 61.336 63.158 0.00 0.00 0.00 4.00
6287 6488 2.034221 GCCGCCAGAGGAAAAGGT 59.966 61.111 0.00 0.00 0.00 3.50
6288 6489 3.127533 CGCCGCCAGAGGAAAAGG 61.128 66.667 0.00 0.00 0.00 3.11
6289 6490 3.804193 GCGCCGCCAGAGGAAAAG 61.804 66.667 0.00 0.00 0.00 2.27
6306 6507 4.742201 CCACGTGGACTCTGGCGG 62.742 72.222 31.31 0.00 37.39 6.13
6307 6508 3.515316 AACCACGTGGACTCTGGCG 62.515 63.158 40.21 11.37 38.94 5.69
6308 6509 1.961277 CAACCACGTGGACTCTGGC 60.961 63.158 40.21 0.00 38.94 4.85
6309 6510 1.961277 GCAACCACGTGGACTCTGG 60.961 63.158 40.21 17.16 38.94 3.86
6310 6511 0.317160 TAGCAACCACGTGGACTCTG 59.683 55.000 40.21 27.79 38.94 3.35
6311 6512 0.317479 GTAGCAACCACGTGGACTCT 59.683 55.000 40.21 29.75 38.94 3.24
6312 6513 1.007336 CGTAGCAACCACGTGGACTC 61.007 60.000 40.21 25.20 38.94 3.36
6313 6514 1.006571 CGTAGCAACCACGTGGACT 60.007 57.895 40.21 31.18 38.94 3.85
6314 6515 3.545911 CGTAGCAACCACGTGGAC 58.454 61.111 40.21 26.65 38.94 4.02
6319 6520 1.337821 GAGAAGACGTAGCAACCACG 58.662 55.000 0.00 0.00 44.80 4.94
6320 6521 1.337821 CGAGAAGACGTAGCAACCAC 58.662 55.000 0.00 0.00 0.00 4.16
6321 6522 0.388134 GCGAGAAGACGTAGCAACCA 60.388 55.000 0.00 0.00 35.59 3.67
6322 6523 0.109226 AGCGAGAAGACGTAGCAACC 60.109 55.000 0.00 0.00 35.59 3.77
6323 6524 0.985549 CAGCGAGAAGACGTAGCAAC 59.014 55.000 0.00 0.00 35.59 4.17
6324 6525 0.109272 CCAGCGAGAAGACGTAGCAA 60.109 55.000 0.00 0.00 35.59 3.91
6325 6526 0.958876 TCCAGCGAGAAGACGTAGCA 60.959 55.000 0.00 0.00 35.59 3.49
6326 6527 0.382515 ATCCAGCGAGAAGACGTAGC 59.617 55.000 0.00 0.00 35.59 3.58
6327 6528 1.944024 AGATCCAGCGAGAAGACGTAG 59.056 52.381 0.00 0.00 35.59 3.51
6328 6529 1.941294 GAGATCCAGCGAGAAGACGTA 59.059 52.381 0.00 0.00 35.59 3.57
6329 6530 0.736053 GAGATCCAGCGAGAAGACGT 59.264 55.000 0.00 0.00 35.59 4.34
6330 6531 0.316607 CGAGATCCAGCGAGAAGACG 60.317 60.000 0.00 0.00 0.00 4.18
6331 6532 0.593773 GCGAGATCCAGCGAGAAGAC 60.594 60.000 4.64 0.00 0.00 3.01
6332 6533 1.729470 GGCGAGATCCAGCGAGAAGA 61.729 60.000 4.64 0.00 0.00 2.87
6333 6534 1.299773 GGCGAGATCCAGCGAGAAG 60.300 63.158 4.64 0.00 0.00 2.85
6334 6535 2.808315 GGCGAGATCCAGCGAGAA 59.192 61.111 4.64 0.00 0.00 2.87
6335 6536 3.586961 CGGCGAGATCCAGCGAGA 61.587 66.667 0.00 0.00 0.00 4.04
6336 6537 4.637489 CCGGCGAGATCCAGCGAG 62.637 72.222 9.30 1.93 0.00 5.03
6348 6549 3.257561 CAGACTTGATCGCCGGCG 61.258 66.667 42.13 42.13 41.35 6.46
6349 6550 3.567797 GCAGACTTGATCGCCGGC 61.568 66.667 19.07 19.07 0.00 6.13
6350 6551 1.699656 CTTGCAGACTTGATCGCCGG 61.700 60.000 0.00 0.00 0.00 6.13
6351 6552 0.737367 TCTTGCAGACTTGATCGCCG 60.737 55.000 0.00 0.00 0.00 6.46
6352 6553 0.723981 GTCTTGCAGACTTGATCGCC 59.276 55.000 8.50 0.00 41.88 5.54
6353 6554 0.368227 CGTCTTGCAGACTTGATCGC 59.632 55.000 12.45 0.00 42.92 4.58
6354 6555 0.994995 CCGTCTTGCAGACTTGATCG 59.005 55.000 12.45 1.56 42.92 3.69
6355 6556 1.066858 TCCCGTCTTGCAGACTTGATC 60.067 52.381 12.45 0.00 42.92 2.92
6356 6557 0.976641 TCCCGTCTTGCAGACTTGAT 59.023 50.000 12.45 0.00 42.92 2.57
6357 6558 0.976641 ATCCCGTCTTGCAGACTTGA 59.023 50.000 12.45 9.46 42.92 3.02
6358 6559 1.338105 TGATCCCGTCTTGCAGACTTG 60.338 52.381 12.45 5.62 42.92 3.16
6359 6560 0.976641 TGATCCCGTCTTGCAGACTT 59.023 50.000 12.45 0.00 42.92 3.01
6360 6561 0.534412 CTGATCCCGTCTTGCAGACT 59.466 55.000 12.45 0.00 42.92 3.24
6361 6562 0.247736 ACTGATCCCGTCTTGCAGAC 59.752 55.000 0.00 6.31 41.71 3.51
6362 6563 0.247460 CACTGATCCCGTCTTGCAGA 59.753 55.000 0.00 0.00 0.00 4.26
6363 6564 0.247460 TCACTGATCCCGTCTTGCAG 59.753 55.000 0.00 0.00 0.00 4.41
6364 6565 0.904649 ATCACTGATCCCGTCTTGCA 59.095 50.000 0.00 0.00 0.00 4.08
6365 6566 1.137872 AGATCACTGATCCCGTCTTGC 59.862 52.381 14.41 0.00 39.66 4.01
6366 6567 2.482664 CCAGATCACTGATCCCGTCTTG 60.483 54.545 14.41 6.17 46.03 3.02
6367 6568 1.759445 CCAGATCACTGATCCCGTCTT 59.241 52.381 14.41 0.00 46.03 3.01
6368 6569 1.407936 CCAGATCACTGATCCCGTCT 58.592 55.000 14.41 0.00 46.03 4.18
6369 6570 0.390860 CCCAGATCACTGATCCCGTC 59.609 60.000 14.41 0.00 46.03 4.79
6370 6571 1.690219 GCCCAGATCACTGATCCCGT 61.690 60.000 14.41 0.00 46.03 5.28
6371 6572 1.070445 GCCCAGATCACTGATCCCG 59.930 63.158 14.41 7.13 46.03 5.14
6372 6573 1.070445 CGCCCAGATCACTGATCCC 59.930 63.158 14.41 2.08 46.03 3.85
6373 6574 1.596477 GCGCCCAGATCACTGATCC 60.596 63.158 14.41 0.16 46.03 3.36
6374 6575 0.250209 ATGCGCCCAGATCACTGATC 60.250 55.000 4.18 10.65 46.03 2.92
6375 6576 0.534427 CATGCGCCCAGATCACTGAT 60.534 55.000 4.18 0.00 46.03 2.90
6376 6577 1.153309 CATGCGCCCAGATCACTGA 60.153 57.895 4.18 0.00 46.03 3.41
6377 6578 2.184830 CCATGCGCCCAGATCACTG 61.185 63.158 4.18 0.00 43.12 3.66
6378 6579 2.191375 CCATGCGCCCAGATCACT 59.809 61.111 4.18 0.00 0.00 3.41
6379 6580 1.890979 CTCCATGCGCCCAGATCAC 60.891 63.158 4.18 0.00 0.00 3.06
6380 6581 1.625417 TTCTCCATGCGCCCAGATCA 61.625 55.000 4.18 0.00 0.00 2.92
6381 6582 1.146930 TTCTCCATGCGCCCAGATC 59.853 57.895 4.18 0.00 0.00 2.75
6382 6583 1.153086 GTTCTCCATGCGCCCAGAT 60.153 57.895 4.18 0.00 0.00 2.90
6383 6584 1.913951 ATGTTCTCCATGCGCCCAGA 61.914 55.000 4.18 0.00 30.69 3.86
6384 6585 1.442526 GATGTTCTCCATGCGCCCAG 61.443 60.000 4.18 0.00 32.56 4.45
6385 6586 1.451927 GATGTTCTCCATGCGCCCA 60.452 57.895 4.18 0.00 32.56 5.36
6386 6587 2.537560 CGATGTTCTCCATGCGCCC 61.538 63.158 4.18 0.00 32.56 6.13
6387 6588 2.537560 CCGATGTTCTCCATGCGCC 61.538 63.158 4.18 0.00 32.56 6.53
6388 6589 1.815421 ACCGATGTTCTCCATGCGC 60.815 57.895 0.00 0.00 32.56 6.09
6389 6590 0.460109 TCACCGATGTTCTCCATGCG 60.460 55.000 0.00 0.00 32.56 4.73
6390 6591 1.009829 GTCACCGATGTTCTCCATGC 58.990 55.000 0.00 0.00 32.56 4.06
6391 6592 1.280982 CGTCACCGATGTTCTCCATG 58.719 55.000 0.00 0.00 32.56 3.66
6392 6593 0.175760 CCGTCACCGATGTTCTCCAT 59.824 55.000 0.00 0.00 36.13 3.41
6393 6594 1.589630 CCGTCACCGATGTTCTCCA 59.410 57.895 0.00 0.00 35.63 3.86
6394 6595 1.153628 CCCGTCACCGATGTTCTCC 60.154 63.158 0.00 0.00 35.63 3.71
6395 6596 1.153628 CCCCGTCACCGATGTTCTC 60.154 63.158 0.00 0.00 35.63 2.87
6396 6597 0.976073 ATCCCCGTCACCGATGTTCT 60.976 55.000 0.00 0.00 35.63 3.01
6397 6598 0.748450 TATCCCCGTCACCGATGTTC 59.252 55.000 0.00 0.00 35.63 3.18
6398 6599 0.750850 CTATCCCCGTCACCGATGTT 59.249 55.000 0.00 0.00 35.63 2.71
6399 6600 0.396695 ACTATCCCCGTCACCGATGT 60.397 55.000 0.00 0.00 35.63 3.06
6400 6601 0.032130 CACTATCCCCGTCACCGATG 59.968 60.000 0.00 0.00 35.63 3.84
6401 6602 1.113517 CCACTATCCCCGTCACCGAT 61.114 60.000 0.00 0.00 35.63 4.18
6402 6603 1.755395 CCACTATCCCCGTCACCGA 60.755 63.158 0.00 0.00 35.63 4.69
6403 6604 1.735376 CTCCACTATCCCCGTCACCG 61.735 65.000 0.00 0.00 0.00 4.94
6404 6605 2.029307 GCTCCACTATCCCCGTCACC 62.029 65.000 0.00 0.00 0.00 4.02
6405 6606 1.442148 GCTCCACTATCCCCGTCAC 59.558 63.158 0.00 0.00 0.00 3.67
6406 6607 2.125326 CGCTCCACTATCCCCGTCA 61.125 63.158 0.00 0.00 0.00 4.35
6407 6608 2.728817 CGCTCCACTATCCCCGTC 59.271 66.667 0.00 0.00 0.00 4.79
6408 6609 2.838225 CCGCTCCACTATCCCCGT 60.838 66.667 0.00 0.00 0.00 5.28
6409 6610 3.616721 CCCGCTCCACTATCCCCG 61.617 72.222 0.00 0.00 0.00 5.73
6410 6611 3.242291 CCCCGCTCCACTATCCCC 61.242 72.222 0.00 0.00 0.00 4.81
6411 6612 3.242291 CCCCCGCTCCACTATCCC 61.242 72.222 0.00 0.00 0.00 3.85
6425 6626 1.298993 GACCTTCCTTCGAACCCCC 59.701 63.158 0.00 0.00 0.00 5.40
6426 6627 0.036294 CTGACCTTCCTTCGAACCCC 60.036 60.000 0.00 0.00 0.00 4.95
6427 6628 0.036294 CCTGACCTTCCTTCGAACCC 60.036 60.000 0.00 0.00 0.00 4.11
6428 6629 0.036294 CCCTGACCTTCCTTCGAACC 60.036 60.000 0.00 0.00 0.00 3.62
6429 6630 0.036294 CCCCTGACCTTCCTTCGAAC 60.036 60.000 0.00 0.00 0.00 3.95
6430 6631 0.178915 TCCCCTGACCTTCCTTCGAA 60.179 55.000 0.00 0.00 0.00 3.71
6431 6632 0.042731 ATCCCCTGACCTTCCTTCGA 59.957 55.000 0.00 0.00 0.00 3.71
6432 6633 1.689273 CTATCCCCTGACCTTCCTTCG 59.311 57.143 0.00 0.00 0.00 3.79
6433 6634 2.050918 CCTATCCCCTGACCTTCCTTC 58.949 57.143 0.00 0.00 0.00 3.46
6434 6635 1.657162 TCCTATCCCCTGACCTTCCTT 59.343 52.381 0.00 0.00 0.00 3.36
6435 6636 1.330155 TCCTATCCCCTGACCTTCCT 58.670 55.000 0.00 0.00 0.00 3.36
6436 6637 2.050918 CTTCCTATCCCCTGACCTTCC 58.949 57.143 0.00 0.00 0.00 3.46
6437 6638 2.765502 ACTTCCTATCCCCTGACCTTC 58.234 52.381 0.00 0.00 0.00 3.46
6438 6639 2.972153 ACTTCCTATCCCCTGACCTT 57.028 50.000 0.00 0.00 0.00 3.50
6439 6640 2.426561 GCTACTTCCTATCCCCTGACCT 60.427 54.545 0.00 0.00 0.00 3.85
6440 6641 1.972075 GCTACTTCCTATCCCCTGACC 59.028 57.143 0.00 0.00 0.00 4.02
6441 6642 1.614413 CGCTACTTCCTATCCCCTGAC 59.386 57.143 0.00 0.00 0.00 3.51
6442 6643 1.480683 CCGCTACTTCCTATCCCCTGA 60.481 57.143 0.00 0.00 0.00 3.86
6443 6644 0.969894 CCGCTACTTCCTATCCCCTG 59.030 60.000 0.00 0.00 0.00 4.45
6444 6645 0.178929 CCCGCTACTTCCTATCCCCT 60.179 60.000 0.00 0.00 0.00 4.79
6445 6646 1.192803 CCCCGCTACTTCCTATCCCC 61.193 65.000 0.00 0.00 0.00 4.81
6446 6647 0.178941 TCCCCGCTACTTCCTATCCC 60.179 60.000 0.00 0.00 0.00 3.85
6447 6648 1.939980 ATCCCCGCTACTTCCTATCC 58.060 55.000 0.00 0.00 0.00 2.59
6448 6649 3.949113 CTCTATCCCCGCTACTTCCTATC 59.051 52.174 0.00 0.00 0.00 2.08
6449 6650 3.592427 TCTCTATCCCCGCTACTTCCTAT 59.408 47.826 0.00 0.00 0.00 2.57
6450 6651 2.984604 TCTCTATCCCCGCTACTTCCTA 59.015 50.000 0.00 0.00 0.00 2.94
6451 6652 1.781529 TCTCTATCCCCGCTACTTCCT 59.218 52.381 0.00 0.00 0.00 3.36
6452 6653 1.887854 GTCTCTATCCCCGCTACTTCC 59.112 57.143 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.