Multiple sequence alignment - TraesCS4A01G233800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G233800 chr4A 100.000 4492 0 0 1 4492 542556908 542552417 0.000000e+00 8296
1 TraesCS4A01G233800 chr4A 87.470 830 80 13 960 1787 551132383 551133190 0.000000e+00 935
2 TraesCS4A01G233800 chr4A 83.483 890 110 14 905 1787 542533586 542532727 0.000000e+00 795
3 TraesCS4A01G233800 chr4A 80.189 212 18 14 353 548 551131588 551131791 2.180000e-28 137
4 TraesCS4A01G233800 chr4D 90.834 1822 96 15 2111 3905 54447733 54449510 0.000000e+00 2374
5 TraesCS4A01G233800 chr4D 92.716 1469 85 8 660 2112 54446235 54447697 0.000000e+00 2100
6 TraesCS4A01G233800 chr4D 87.822 1166 122 13 960 2118 47336804 47335652 0.000000e+00 1349
7 TraesCS4A01G233800 chr4D 84.780 841 84 23 955 1784 54604304 54605111 0.000000e+00 804
8 TraesCS4A01G233800 chr4D 88.595 605 58 8 1189 1784 54475097 54475699 0.000000e+00 725
9 TraesCS4A01G233800 chr4D 82.143 840 90 26 2111 2936 47335622 47334829 0.000000e+00 665
10 TraesCS4A01G233800 chr4D 76.998 613 117 18 1198 1804 54262322 54262916 3.350000e-86 329
11 TraesCS4A01G233800 chr4D 83.526 346 39 16 3944 4278 108839851 108840189 1.570000e-79 307
12 TraesCS4A01G233800 chr4D 91.129 124 11 0 4369 4492 54449627 54449750 7.730000e-38 169
13 TraesCS4A01G233800 chr4B 88.489 1972 136 28 2109 4042 80558121 80560039 0.000000e+00 2300
14 TraesCS4A01G233800 chr4B 88.489 1972 136 28 2109 4042 80586791 80588709 0.000000e+00 2300
15 TraesCS4A01G233800 chr4B 87.680 1461 142 26 660 2113 80556659 80558088 0.000000e+00 1666
16 TraesCS4A01G233800 chr4B 87.680 1461 142 26 660 2113 80585329 80586758 0.000000e+00 1666
17 TraesCS4A01G233800 chr4B 89.020 510 49 3 1195 1701 80593796 80594301 3.820000e-175 625
18 TraesCS4A01G233800 chr4B 85.685 489 47 9 2111 2595 68960716 68960247 1.120000e-135 494
19 TraesCS4A01G233800 chr4B 89.710 379 32 5 4116 4492 80560074 80560447 1.130000e-130 477
20 TraesCS4A01G233800 chr4B 89.710 379 32 5 4116 4492 80588744 80589117 1.130000e-130 477
21 TraesCS4A01G233800 chr4B 88.315 368 34 4 1596 1959 68961170 68960808 2.480000e-117 433
22 TraesCS4A01G233800 chr4B 90.615 309 18 7 356 663 80556314 80556612 2.520000e-107 399
23 TraesCS4A01G233800 chr4B 90.615 309 18 7 356 663 80584984 80585282 2.520000e-107 399
24 TraesCS4A01G233800 chr4B 83.922 255 30 7 896 1149 80593475 80593719 2.700000e-57 233
25 TraesCS4A01G233800 chr4B 87.681 138 8 6 1635 1768 68730350 68730218 7.780000e-33 152
26 TraesCS4A01G233800 chr1D 93.525 278 8 7 24 291 40317281 40317004 5.410000e-109 405
27 TraesCS4A01G233800 chr1D 81.039 385 52 14 3907 4280 416225192 416225566 2.040000e-73 287
28 TraesCS4A01G233800 chr1D 94.505 91 5 0 24 114 40236222 40236132 1.680000e-29 141
29 TraesCS4A01G233800 chr7B 85.714 399 34 19 3906 4290 188941322 188941711 2.520000e-107 399
30 TraesCS4A01G233800 chr7B 92.058 277 11 8 25 290 56449873 56449597 3.280000e-101 379
31 TraesCS4A01G233800 chr6A 84.136 353 42 9 3939 4287 55561050 55561392 3.350000e-86 329
32 TraesCS4A01G233800 chr1A 82.292 384 46 15 3907 4280 513681669 513682040 3.370000e-81 313
33 TraesCS4A01G233800 chr6D 83.881 335 44 7 3964 4290 464981726 464982058 1.210000e-80 311
34 TraesCS4A01G233800 chr7A 87.108 287 17 8 24 290 90227372 90227086 1.570000e-79 307
35 TraesCS4A01G233800 chr3B 87.063 286 16 9 25 290 826278454 826278738 2.030000e-78 303
36 TraesCS4A01G233800 chr3B 83.481 339 36 14 3962 4290 39092366 39092694 9.450000e-77 298
37 TraesCS4A01G233800 chr3D 86.989 269 21 10 24 290 18362761 18362505 1.580000e-74 291
38 TraesCS4A01G233800 chr3D 80.864 324 48 14 3964 4280 576801593 576801909 4.490000e-60 243
39 TraesCS4A01G233800 chr7D 83.209 268 32 8 3964 4227 633242740 633242482 2.700000e-57 233
40 TraesCS4A01G233800 chr7D 95.918 98 4 0 24 121 506892778 506892681 4.650000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G233800 chr4A 542552417 542556908 4491 True 8296.000000 8296 100.000000 1 4492 1 chr4A.!!$R2 4491
1 TraesCS4A01G233800 chr4A 542532727 542533586 859 True 795.000000 795 83.483000 905 1787 1 chr4A.!!$R1 882
2 TraesCS4A01G233800 chr4A 551131588 551133190 1602 False 536.000000 935 83.829500 353 1787 2 chr4A.!!$F1 1434
3 TraesCS4A01G233800 chr4D 54446235 54449750 3515 False 1547.666667 2374 91.559667 660 4492 3 chr4D.!!$F5 3832
4 TraesCS4A01G233800 chr4D 47334829 47336804 1975 True 1007.000000 1349 84.982500 960 2936 2 chr4D.!!$R1 1976
5 TraesCS4A01G233800 chr4D 54604304 54605111 807 False 804.000000 804 84.780000 955 1784 1 chr4D.!!$F3 829
6 TraesCS4A01G233800 chr4D 54475097 54475699 602 False 725.000000 725 88.595000 1189 1784 1 chr4D.!!$F2 595
7 TraesCS4A01G233800 chr4D 54262322 54262916 594 False 329.000000 329 76.998000 1198 1804 1 chr4D.!!$F1 606
8 TraesCS4A01G233800 chr4B 80556314 80560447 4133 False 1210.500000 2300 89.123500 356 4492 4 chr4B.!!$F1 4136
9 TraesCS4A01G233800 chr4B 80584984 80589117 4133 False 1210.500000 2300 89.123500 356 4492 4 chr4B.!!$F2 4136
10 TraesCS4A01G233800 chr4B 68960247 68961170 923 True 463.500000 494 87.000000 1596 2595 2 chr4B.!!$R2 999
11 TraesCS4A01G233800 chr4B 80593475 80594301 826 False 429.000000 625 86.471000 896 1701 2 chr4B.!!$F3 805

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.039527 GTTGATGGACGGTGCCAAAC 60.040 55.0 0.00 0.00 42.16 2.93 F
295 296 0.102663 GAGGATCTCGTTCCGTTCCC 59.897 60.0 0.00 0.00 40.94 3.97 F
641 657 0.114560 TTCAGGTTCTCTCCCTCCGT 59.885 55.0 0.00 0.00 0.00 4.69 F
1606 1970 0.741221 GCTCAGGCCACCGTAGAAAG 60.741 60.0 5.01 0.00 0.00 2.62 F
3265 3716 0.320697 ACTGCCAGGTACCTTCGAAC 59.679 55.0 13.15 0.39 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1066 1369 0.389025 TGTCTATCCATGCGCGTGAT 59.611 50.0 30.68 21.74 0.00 3.06 R
1889 2271 0.454957 CCACGAGCAAAGGCATTTCG 60.455 55.0 2.42 2.42 44.61 3.46 R
1904 2286 1.506493 GCTTCCTCATCATAGCCACG 58.494 55.0 0.00 0.00 0.00 4.94 R
3359 3810 0.889186 TCGCAAAAGAAGTCCAGCCC 60.889 55.0 0.00 0.00 0.00 5.19 R
4337 4822 0.534873 AAGCCACGCCACTTTGTTTT 59.465 45.0 0.00 0.00 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.565759 TGGAATCTGAATCCTGGTGGG 59.434 52.381 12.73 0.00 37.85 4.61
21 22 1.685148 GAATCTGAATCCTGGTGGGC 58.315 55.000 0.00 0.00 34.39 5.36
22 23 1.213926 GAATCTGAATCCTGGTGGGCT 59.786 52.381 0.00 0.00 34.39 5.19
23 24 0.549950 ATCTGAATCCTGGTGGGCTG 59.450 55.000 0.00 0.00 34.39 4.85
24 25 0.842030 TCTGAATCCTGGTGGGCTGT 60.842 55.000 0.00 0.00 34.39 4.40
25 26 0.679002 CTGAATCCTGGTGGGCTGTG 60.679 60.000 0.00 0.00 34.39 3.66
26 27 1.133181 TGAATCCTGGTGGGCTGTGA 61.133 55.000 0.00 0.00 34.39 3.58
27 28 0.257039 GAATCCTGGTGGGCTGTGAT 59.743 55.000 0.00 0.00 34.39 3.06
28 29 1.490490 GAATCCTGGTGGGCTGTGATA 59.510 52.381 0.00 0.00 34.39 2.15
29 30 1.825105 ATCCTGGTGGGCTGTGATAT 58.175 50.000 0.00 0.00 34.39 1.63
30 31 1.595311 TCCTGGTGGGCTGTGATATT 58.405 50.000 0.00 0.00 34.39 1.28
31 32 1.212688 TCCTGGTGGGCTGTGATATTG 59.787 52.381 0.00 0.00 34.39 1.90
32 33 1.212688 CCTGGTGGGCTGTGATATTGA 59.787 52.381 0.00 0.00 0.00 2.57
33 34 2.292267 CTGGTGGGCTGTGATATTGAC 58.708 52.381 0.00 0.00 0.00 3.18
34 35 1.299541 GGTGGGCTGTGATATTGACG 58.700 55.000 0.00 0.00 0.00 4.35
35 36 1.134521 GGTGGGCTGTGATATTGACGA 60.135 52.381 0.00 0.00 0.00 4.20
36 37 2.205074 GTGGGCTGTGATATTGACGAG 58.795 52.381 0.00 0.00 0.00 4.18
37 38 1.221414 GGGCTGTGATATTGACGAGC 58.779 55.000 0.00 0.00 0.00 5.03
38 39 1.473257 GGGCTGTGATATTGACGAGCA 60.473 52.381 0.00 0.00 0.00 4.26
39 40 1.863454 GGCTGTGATATTGACGAGCAG 59.137 52.381 0.00 0.00 0.00 4.24
40 41 2.481969 GGCTGTGATATTGACGAGCAGA 60.482 50.000 0.00 0.00 0.00 4.26
41 42 2.793790 GCTGTGATATTGACGAGCAGAG 59.206 50.000 0.00 0.00 0.00 3.35
42 43 2.793790 CTGTGATATTGACGAGCAGAGC 59.206 50.000 0.00 0.00 0.00 4.09
43 44 2.166254 TGTGATATTGACGAGCAGAGCA 59.834 45.455 0.00 0.00 0.00 4.26
44 45 3.190079 GTGATATTGACGAGCAGAGCAA 58.810 45.455 0.00 0.00 0.00 3.91
45 46 3.244814 GTGATATTGACGAGCAGAGCAAG 59.755 47.826 0.00 0.00 0.00 4.01
46 47 2.299993 TATTGACGAGCAGAGCAAGG 57.700 50.000 0.00 0.00 0.00 3.61
47 48 1.023513 ATTGACGAGCAGAGCAAGGC 61.024 55.000 0.00 0.00 0.00 4.35
48 49 2.047844 GACGAGCAGAGCAAGGCA 60.048 61.111 0.00 0.00 0.00 4.75
49 50 1.449246 GACGAGCAGAGCAAGGCAT 60.449 57.895 0.00 0.00 0.00 4.40
50 51 1.427592 GACGAGCAGAGCAAGGCATC 61.428 60.000 0.00 0.00 0.00 3.91
51 52 2.178890 CGAGCAGAGCAAGGCATCC 61.179 63.158 0.00 0.00 0.00 3.51
52 53 1.077930 GAGCAGAGCAAGGCATCCA 60.078 57.895 0.00 0.00 0.00 3.41
53 54 1.375098 GAGCAGAGCAAGGCATCCAC 61.375 60.000 0.00 0.00 0.00 4.02
54 55 2.413142 GCAGAGCAAGGCATCCACC 61.413 63.158 0.00 0.00 0.00 4.61
55 56 1.302285 CAGAGCAAGGCATCCACCT 59.698 57.895 0.00 0.00 43.91 4.00
56 57 0.747283 CAGAGCAAGGCATCCACCTC 60.747 60.000 0.00 0.00 39.93 3.85
57 58 1.452833 GAGCAAGGCATCCACCTCC 60.453 63.158 0.00 0.00 39.93 4.30
58 59 2.825836 GCAAGGCATCCACCTCCG 60.826 66.667 0.00 0.00 39.93 4.63
59 60 2.124570 CAAGGCATCCACCTCCGG 60.125 66.667 0.00 0.00 39.93 5.14
60 61 3.411517 AAGGCATCCACCTCCGGG 61.412 66.667 0.00 0.00 39.93 5.73
63 64 4.554036 GCATCCACCTCCGGGCTC 62.554 72.222 0.00 0.00 35.63 4.70
64 65 3.866582 CATCCACCTCCGGGCTCC 61.867 72.222 0.00 0.00 35.63 4.70
77 78 4.645809 GCTCCGGCCATCTCTTTT 57.354 55.556 2.24 0.00 0.00 2.27
78 79 2.873797 GCTCCGGCCATCTCTTTTT 58.126 52.632 2.24 0.00 0.00 1.94
79 80 0.735471 GCTCCGGCCATCTCTTTTTC 59.265 55.000 2.24 0.00 0.00 2.29
80 81 1.009829 CTCCGGCCATCTCTTTTTCG 58.990 55.000 2.24 0.00 0.00 3.46
81 82 0.323629 TCCGGCCATCTCTTTTTCGT 59.676 50.000 2.24 0.00 0.00 3.85
82 83 0.727398 CCGGCCATCTCTTTTTCGTC 59.273 55.000 2.24 0.00 0.00 4.20
83 84 0.370273 CGGCCATCTCTTTTTCGTCG 59.630 55.000 2.24 0.00 0.00 5.12
84 85 0.727398 GGCCATCTCTTTTTCGTCGG 59.273 55.000 0.00 0.00 0.00 4.79
85 86 0.097150 GCCATCTCTTTTTCGTCGGC 59.903 55.000 0.00 0.00 0.00 5.54
86 87 1.726853 CCATCTCTTTTTCGTCGGCT 58.273 50.000 0.00 0.00 0.00 5.52
87 88 1.394917 CCATCTCTTTTTCGTCGGCTG 59.605 52.381 0.00 0.00 0.00 4.85
88 89 1.394917 CATCTCTTTTTCGTCGGCTGG 59.605 52.381 0.00 0.00 0.00 4.85
89 90 0.949105 TCTCTTTTTCGTCGGCTGGC 60.949 55.000 0.00 0.00 0.00 4.85
90 91 2.173382 CTTTTTCGTCGGCTGGCG 59.827 61.111 14.78 14.78 0.00 5.69
91 92 3.928618 CTTTTTCGTCGGCTGGCGC 62.929 63.158 16.33 12.79 0.00 6.53
107 108 4.074454 GCCGTCTGCGTACTCTTC 57.926 61.111 0.00 0.00 36.15 2.87
108 109 1.868251 GCCGTCTGCGTACTCTTCG 60.868 63.158 0.00 0.00 36.15 3.79
114 115 2.506438 GCGTACTCTTCGCGCCTT 60.506 61.111 0.00 0.00 44.67 4.35
115 116 2.092882 GCGTACTCTTCGCGCCTTT 61.093 57.895 0.00 0.00 44.67 3.11
116 117 1.623973 GCGTACTCTTCGCGCCTTTT 61.624 55.000 0.00 0.00 44.67 2.27
117 118 0.788391 CGTACTCTTCGCGCCTTTTT 59.212 50.000 0.00 0.00 0.00 1.94
118 119 1.201780 CGTACTCTTCGCGCCTTTTTC 60.202 52.381 0.00 0.00 0.00 2.29
119 120 2.067013 GTACTCTTCGCGCCTTTTTCT 58.933 47.619 0.00 0.00 0.00 2.52
120 121 0.868406 ACTCTTCGCGCCTTTTTCTG 59.132 50.000 0.00 0.00 0.00 3.02
121 122 0.868406 CTCTTCGCGCCTTTTTCTGT 59.132 50.000 0.00 0.00 0.00 3.41
122 123 0.865769 TCTTCGCGCCTTTTTCTGTC 59.134 50.000 0.00 0.00 0.00 3.51
123 124 0.868406 CTTCGCGCCTTTTTCTGTCT 59.132 50.000 0.00 0.00 0.00 3.41
124 125 0.865769 TTCGCGCCTTTTTCTGTCTC 59.134 50.000 0.00 0.00 0.00 3.36
125 126 0.949105 TCGCGCCTTTTTCTGTCTCC 60.949 55.000 0.00 0.00 0.00 3.71
126 127 0.951040 CGCGCCTTTTTCTGTCTCCT 60.951 55.000 0.00 0.00 0.00 3.69
127 128 0.799393 GCGCCTTTTTCTGTCTCCTC 59.201 55.000 0.00 0.00 0.00 3.71
128 129 1.071605 CGCCTTTTTCTGTCTCCTCG 58.928 55.000 0.00 0.00 0.00 4.63
129 130 0.799393 GCCTTTTTCTGTCTCCTCGC 59.201 55.000 0.00 0.00 0.00 5.03
130 131 1.071605 CCTTTTTCTGTCTCCTCGCG 58.928 55.000 0.00 0.00 0.00 5.87
131 132 0.440371 CTTTTTCTGTCTCCTCGCGC 59.560 55.000 0.00 0.00 0.00 6.86
132 133 0.949105 TTTTTCTGTCTCCTCGCGCC 60.949 55.000 0.00 0.00 0.00 6.53
133 134 2.781595 TTTTCTGTCTCCTCGCGCCC 62.782 60.000 0.00 0.00 0.00 6.13
134 135 4.742649 TCTGTCTCCTCGCGCCCT 62.743 66.667 0.00 0.00 0.00 5.19
135 136 3.764466 CTGTCTCCTCGCGCCCTT 61.764 66.667 0.00 0.00 0.00 3.95
136 137 3.302347 CTGTCTCCTCGCGCCCTTT 62.302 63.158 0.00 0.00 0.00 3.11
137 138 2.047179 GTCTCCTCGCGCCCTTTT 60.047 61.111 0.00 0.00 0.00 2.27
138 139 2.101233 GTCTCCTCGCGCCCTTTTC 61.101 63.158 0.00 0.00 0.00 2.29
139 140 2.820037 CTCCTCGCGCCCTTTTCC 60.820 66.667 0.00 0.00 0.00 3.13
140 141 4.404098 TCCTCGCGCCCTTTTCCC 62.404 66.667 0.00 0.00 0.00 3.97
148 149 4.029809 CCCTTTTCCCCGTCGCCT 62.030 66.667 0.00 0.00 0.00 5.52
149 150 2.746277 CCTTTTCCCCGTCGCCTG 60.746 66.667 0.00 0.00 0.00 4.85
150 151 3.431725 CTTTTCCCCGTCGCCTGC 61.432 66.667 0.00 0.00 0.00 4.85
162 163 4.847444 GCCTGCCTCCCTCGCTTC 62.847 72.222 0.00 0.00 0.00 3.86
163 164 4.521062 CCTGCCTCCCTCGCTTCG 62.521 72.222 0.00 0.00 0.00 3.79
164 165 3.764466 CTGCCTCCCTCGCTTCGT 61.764 66.667 0.00 0.00 0.00 3.85
165 166 2.361992 TGCCTCCCTCGCTTCGTA 60.362 61.111 0.00 0.00 0.00 3.43
166 167 2.343163 CTGCCTCCCTCGCTTCGTAG 62.343 65.000 0.00 0.00 0.00 3.51
167 168 2.416432 GCCTCCCTCGCTTCGTAGT 61.416 63.158 0.00 0.00 0.00 2.73
168 169 1.433879 CCTCCCTCGCTTCGTAGTG 59.566 63.158 0.00 0.00 0.00 2.74
169 170 1.433879 CTCCCTCGCTTCGTAGTGG 59.566 63.158 2.63 0.00 32.63 4.00
170 171 2.005960 CTCCCTCGCTTCGTAGTGGG 62.006 65.000 2.63 6.66 36.14 4.61
171 172 2.202756 CCTCGCTTCGTAGTGGGC 60.203 66.667 2.63 0.00 30.66 5.36
172 173 2.202756 CTCGCTTCGTAGTGGGCC 60.203 66.667 0.00 0.00 32.63 5.80
173 174 4.124351 TCGCTTCGTAGTGGGCCG 62.124 66.667 0.00 0.00 32.63 6.13
175 176 4.452733 GCTTCGTAGTGGGCCGCT 62.453 66.667 24.99 24.99 0.00 5.52
176 177 2.202756 CTTCGTAGTGGGCCGCTC 60.203 66.667 25.40 14.11 0.00 5.03
177 178 4.124351 TTCGTAGTGGGCCGCTCG 62.124 66.667 25.40 24.38 0.00 5.03
179 180 4.430765 CGTAGTGGGCCGCTCGTT 62.431 66.667 25.40 1.61 0.00 3.85
180 181 2.047560 GTAGTGGGCCGCTCGTTT 60.048 61.111 25.40 1.16 0.00 3.60
181 182 1.670083 GTAGTGGGCCGCTCGTTTT 60.670 57.895 25.40 0.29 0.00 2.43
182 183 1.071814 TAGTGGGCCGCTCGTTTTT 59.928 52.632 25.40 0.00 0.00 1.94
183 184 1.231958 TAGTGGGCCGCTCGTTTTTG 61.232 55.000 25.40 0.00 0.00 2.44
184 185 2.517402 TGGGCCGCTCGTTTTTGT 60.517 55.556 0.00 0.00 0.00 2.83
185 186 2.050442 GGGCCGCTCGTTTTTGTG 60.050 61.111 0.00 0.00 0.00 3.33
186 187 2.729491 GGCCGCTCGTTTTTGTGC 60.729 61.111 0.00 0.00 0.00 4.57
187 188 2.331451 GCCGCTCGTTTTTGTGCT 59.669 55.556 0.00 0.00 0.00 4.40
188 189 2.010817 GCCGCTCGTTTTTGTGCTG 61.011 57.895 0.00 0.00 0.00 4.41
189 190 1.646540 CCGCTCGTTTTTGTGCTGA 59.353 52.632 0.00 0.00 0.00 4.26
190 191 0.238289 CCGCTCGTTTTTGTGCTGAT 59.762 50.000 0.00 0.00 0.00 2.90
191 192 1.595609 CGCTCGTTTTTGTGCTGATC 58.404 50.000 0.00 0.00 0.00 2.92
192 193 1.195448 CGCTCGTTTTTGTGCTGATCT 59.805 47.619 0.00 0.00 0.00 2.75
193 194 2.578495 GCTCGTTTTTGTGCTGATCTG 58.422 47.619 0.00 0.00 0.00 2.90
194 195 2.224079 GCTCGTTTTTGTGCTGATCTGA 59.776 45.455 3.42 0.00 0.00 3.27
195 196 3.666374 GCTCGTTTTTGTGCTGATCTGAG 60.666 47.826 3.42 0.00 0.00 3.35
196 197 2.224079 TCGTTTTTGTGCTGATCTGAGC 59.776 45.455 3.42 0.59 39.62 4.26
197 198 2.578495 GTTTTTGTGCTGATCTGAGCG 58.422 47.619 3.42 0.00 42.32 5.03
198 199 2.168326 TTTTGTGCTGATCTGAGCGA 57.832 45.000 3.42 0.00 42.32 4.93
199 200 2.168326 TTTGTGCTGATCTGAGCGAA 57.832 45.000 3.42 0.00 42.32 4.70
200 201 1.432514 TTGTGCTGATCTGAGCGAAC 58.567 50.000 3.42 0.00 42.32 3.95
201 202 0.390340 TGTGCTGATCTGAGCGAACC 60.390 55.000 3.42 0.00 42.32 3.62
202 203 0.390340 GTGCTGATCTGAGCGAACCA 60.390 55.000 3.42 0.00 42.32 3.67
203 204 0.108472 TGCTGATCTGAGCGAACCAG 60.108 55.000 3.42 0.00 42.32 4.00
204 205 0.174389 GCTGATCTGAGCGAACCAGA 59.826 55.000 3.42 0.00 43.84 3.86
205 206 1.802136 GCTGATCTGAGCGAACCAGAG 60.802 57.143 3.42 0.00 43.07 3.35
206 207 1.747924 CTGATCTGAGCGAACCAGAGA 59.252 52.381 0.00 0.00 43.07 3.10
207 208 1.747924 TGATCTGAGCGAACCAGAGAG 59.252 52.381 0.00 0.00 43.07 3.20
208 209 0.459489 ATCTGAGCGAACCAGAGAGC 59.541 55.000 0.00 0.00 43.07 4.09
209 210 0.610509 TCTGAGCGAACCAGAGAGCT 60.611 55.000 0.00 0.00 43.33 4.09
210 211 0.458197 CTGAGCGAACCAGAGAGCTG 60.458 60.000 0.00 0.00 40.39 4.24
211 212 1.809209 GAGCGAACCAGAGAGCTGC 60.809 63.158 0.00 0.00 40.91 5.25
212 213 2.817396 GCGAACCAGAGAGCTGCC 60.817 66.667 0.00 0.00 40.91 4.85
213 214 2.507992 CGAACCAGAGAGCTGCCG 60.508 66.667 0.00 0.00 40.91 5.69
214 215 2.659610 GAACCAGAGAGCTGCCGT 59.340 61.111 0.00 0.00 40.91 5.68
215 216 1.446966 GAACCAGAGAGCTGCCGTC 60.447 63.158 0.00 0.00 40.91 4.79
216 217 1.882989 GAACCAGAGAGCTGCCGTCT 61.883 60.000 0.00 0.00 40.91 4.18
217 218 2.164865 AACCAGAGAGCTGCCGTCTG 62.165 60.000 17.66 17.66 40.91 3.51
218 219 2.346541 CCAGAGAGCTGCCGTCTGA 61.347 63.158 23.45 0.00 40.21 3.27
219 220 1.674764 CCAGAGAGCTGCCGTCTGAT 61.675 60.000 23.45 0.35 40.21 2.90
220 221 0.528033 CAGAGAGCTGCCGTCTGATG 60.528 60.000 19.15 5.12 40.21 3.07
221 222 1.227205 GAGAGCTGCCGTCTGATGG 60.227 63.158 11.67 11.67 0.00 3.51
222 223 1.954362 GAGAGCTGCCGTCTGATGGT 61.954 60.000 16.88 0.00 0.00 3.55
223 224 1.078848 GAGCTGCCGTCTGATGGTT 60.079 57.895 16.88 1.55 0.00 3.67
224 225 1.364626 GAGCTGCCGTCTGATGGTTG 61.365 60.000 16.88 10.89 0.00 3.77
225 226 1.375908 GCTGCCGTCTGATGGTTGA 60.376 57.895 16.88 1.69 0.00 3.18
226 227 0.745845 GCTGCCGTCTGATGGTTGAT 60.746 55.000 16.88 0.00 0.00 2.57
227 228 1.012086 CTGCCGTCTGATGGTTGATG 58.988 55.000 16.88 0.69 0.00 3.07
228 229 0.392863 TGCCGTCTGATGGTTGATGG 60.393 55.000 16.88 0.00 41.11 3.51
229 230 0.107703 GCCGTCTGATGGTTGATGGA 60.108 55.000 16.88 0.00 40.75 3.41
230 231 1.656652 CCGTCTGATGGTTGATGGAC 58.343 55.000 7.79 0.00 40.75 4.02
231 232 1.280982 CGTCTGATGGTTGATGGACG 58.719 55.000 0.00 0.00 39.95 4.79
232 233 1.656652 GTCTGATGGTTGATGGACGG 58.343 55.000 0.00 0.00 0.00 4.79
233 234 1.066143 GTCTGATGGTTGATGGACGGT 60.066 52.381 0.00 0.00 0.00 4.83
234 235 1.066215 TCTGATGGTTGATGGACGGTG 60.066 52.381 0.00 0.00 0.00 4.94
235 236 0.676466 TGATGGTTGATGGACGGTGC 60.676 55.000 0.00 0.00 0.00 5.01
236 237 1.376609 GATGGTTGATGGACGGTGCC 61.377 60.000 0.00 0.00 0.00 5.01
237 238 2.033448 GGTTGATGGACGGTGCCA 59.967 61.111 0.00 0.00 43.23 4.92
238 239 1.602323 GGTTGATGGACGGTGCCAA 60.602 57.895 0.00 0.00 42.16 4.52
239 240 1.175983 GGTTGATGGACGGTGCCAAA 61.176 55.000 0.00 0.00 42.16 3.28
240 241 0.039527 GTTGATGGACGGTGCCAAAC 60.040 55.000 0.00 0.00 42.16 2.93
241 242 1.511318 TTGATGGACGGTGCCAAACG 61.511 55.000 0.00 0.00 42.16 3.60
242 243 1.669760 GATGGACGGTGCCAAACGA 60.670 57.895 0.00 0.00 42.16 3.85
243 244 1.228003 ATGGACGGTGCCAAACGAA 60.228 52.632 0.00 0.00 42.16 3.85
244 245 1.234615 ATGGACGGTGCCAAACGAAG 61.235 55.000 0.00 0.00 42.16 3.79
245 246 2.613506 GGACGGTGCCAAACGAAGG 61.614 63.158 0.00 0.00 0.00 3.46
246 247 1.595929 GACGGTGCCAAACGAAGGA 60.596 57.895 0.00 0.00 0.00 3.36
247 248 1.838568 GACGGTGCCAAACGAAGGAC 61.839 60.000 0.00 0.00 0.00 3.85
261 262 2.659800 AGGACGTCCCTCTGACTTG 58.340 57.895 30.82 0.00 43.31 3.16
262 263 0.900647 AGGACGTCCCTCTGACTTGG 60.901 60.000 30.82 0.00 43.31 3.61
263 264 0.898789 GGACGTCCCTCTGACTTGGA 60.899 60.000 24.75 0.00 42.13 3.53
264 265 0.966920 GACGTCCCTCTGACTTGGAA 59.033 55.000 3.51 0.00 42.13 3.53
265 266 1.550976 GACGTCCCTCTGACTTGGAAT 59.449 52.381 3.51 0.00 42.13 3.01
266 267 1.550976 ACGTCCCTCTGACTTGGAATC 59.449 52.381 0.00 0.00 42.13 2.52
267 268 1.134670 CGTCCCTCTGACTTGGAATCC 60.135 57.143 0.00 0.00 42.13 3.01
268 269 1.210722 GTCCCTCTGACTTGGAATCCC 59.789 57.143 0.00 0.00 41.03 3.85
269 270 1.203428 TCCCTCTGACTTGGAATCCCA 60.203 52.381 0.00 0.00 41.64 4.37
271 272 2.619074 CCCTCTGACTTGGAATCCCAAC 60.619 54.545 0.00 0.00 46.94 3.77
272 273 2.350522 CTCTGACTTGGAATCCCAACG 58.649 52.381 0.00 0.00 46.94 4.10
273 274 1.697432 TCTGACTTGGAATCCCAACGT 59.303 47.619 0.00 0.00 46.94 3.99
274 275 2.076863 CTGACTTGGAATCCCAACGTC 58.923 52.381 0.00 14.27 46.94 4.34
275 276 1.418264 TGACTTGGAATCCCAACGTCA 59.582 47.619 17.34 17.34 46.94 4.35
276 277 2.076863 GACTTGGAATCCCAACGTCAG 58.923 52.381 15.35 0.00 46.94 3.51
277 278 1.697432 ACTTGGAATCCCAACGTCAGA 59.303 47.619 0.00 0.00 46.94 3.27
278 279 2.289694 ACTTGGAATCCCAACGTCAGAG 60.290 50.000 0.00 0.00 46.94 3.35
279 280 0.613260 TGGAATCCCAACGTCAGAGG 59.387 55.000 0.00 0.00 40.09 3.69
280 281 0.902531 GGAATCCCAACGTCAGAGGA 59.097 55.000 0.00 0.00 0.00 3.71
281 282 1.486726 GGAATCCCAACGTCAGAGGAT 59.513 52.381 0.00 0.00 40.92 3.24
282 283 2.483889 GGAATCCCAACGTCAGAGGATC 60.484 54.545 8.52 0.00 38.17 3.36
294 295 3.644774 GAGGATCTCGTTCCGTTCC 57.355 57.895 0.00 0.00 40.94 3.62
295 296 0.102663 GAGGATCTCGTTCCGTTCCC 59.897 60.000 0.00 0.00 40.94 3.97
296 297 1.143401 GGATCTCGTTCCGTTCCCC 59.857 63.158 0.00 0.00 0.00 4.81
297 298 1.143401 GATCTCGTTCCGTTCCCCC 59.857 63.158 0.00 0.00 0.00 5.40
298 299 2.624437 GATCTCGTTCCGTTCCCCCG 62.624 65.000 0.00 0.00 0.00 5.73
305 306 3.085296 CCGTTCCCCCGGTACCAT 61.085 66.667 13.54 0.00 43.07 3.55
306 307 2.672181 CCGTTCCCCCGGTACCATT 61.672 63.158 13.54 0.00 43.07 3.16
307 308 1.336632 CCGTTCCCCCGGTACCATTA 61.337 60.000 13.54 0.00 43.07 1.90
308 309 0.179076 CGTTCCCCCGGTACCATTAC 60.179 60.000 13.54 0.00 0.00 1.89
309 310 1.206878 GTTCCCCCGGTACCATTACT 58.793 55.000 13.54 0.00 0.00 2.24
310 311 1.561076 GTTCCCCCGGTACCATTACTT 59.439 52.381 13.54 0.00 0.00 2.24
311 312 1.205966 TCCCCCGGTACCATTACTTG 58.794 55.000 13.54 0.00 0.00 3.16
324 325 4.824848 CATTACTTGGACGAAACGAGAG 57.175 45.455 0.00 0.00 0.00 3.20
325 326 3.293311 TTACTTGGACGAAACGAGAGG 57.707 47.619 0.00 0.00 0.00 3.69
326 327 0.317479 ACTTGGACGAAACGAGAGGG 59.683 55.000 0.00 0.00 0.00 4.30
327 328 0.317479 CTTGGACGAAACGAGAGGGT 59.683 55.000 0.00 0.00 0.00 4.34
328 329 0.316204 TTGGACGAAACGAGAGGGTC 59.684 55.000 0.00 0.00 0.00 4.46
336 337 2.125552 CGAGAGGGTCGCATGCAA 60.126 61.111 19.57 0.00 43.03 4.08
337 338 2.169789 CGAGAGGGTCGCATGCAAG 61.170 63.158 19.57 1.83 43.03 4.01
338 339 2.437359 AGAGGGTCGCATGCAAGC 60.437 61.111 19.57 9.28 0.00 4.01
349 350 2.331194 GCATGCAAGCGATCAAAAAGT 58.669 42.857 14.21 0.00 0.00 2.66
350 351 3.500982 GCATGCAAGCGATCAAAAAGTA 58.499 40.909 14.21 0.00 0.00 2.24
351 352 3.301642 GCATGCAAGCGATCAAAAAGTAC 59.698 43.478 14.21 0.00 0.00 2.73
354 355 2.902484 GCAAGCGATCAAAAAGTACGTG 59.098 45.455 0.00 0.00 0.00 4.49
394 396 2.422597 GTGCCAACCTTATTTTTGCCC 58.577 47.619 0.00 0.00 0.00 5.36
397 399 2.038426 GCCAACCTTATTTTTGCCCACT 59.962 45.455 0.00 0.00 0.00 4.00
398 400 3.495983 GCCAACCTTATTTTTGCCCACTT 60.496 43.478 0.00 0.00 0.00 3.16
461 464 2.602660 GTCTACGACTGGACGACTAGAC 59.397 54.545 5.14 0.00 35.99 2.59
462 465 1.587490 CTACGACTGGACGACTAGACG 59.413 57.143 18.20 18.20 44.39 4.18
463 466 0.320247 ACGACTGGACGACTAGACGT 60.320 55.000 19.79 19.79 45.91 4.34
496 499 0.831711 TGCCTGCCACAGAGTACTCA 60.832 55.000 24.44 2.60 32.44 3.41
523 539 2.289547 GAGTAGCAGAGACGAGGATGAC 59.710 54.545 0.00 0.00 0.00 3.06
529 545 2.022240 GAGACGAGGATGACAGGGCC 62.022 65.000 0.00 0.00 0.00 5.80
611 627 0.178891 TGGTGCTTCTTCTCCTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
612 628 0.539518 GGTGCTTCTTCTCCTCCCTC 59.460 60.000 0.00 0.00 0.00 4.30
613 629 0.539518 GTGCTTCTTCTCCTCCCTCC 59.460 60.000 0.00 0.00 0.00 4.30
614 630 0.618968 TGCTTCTTCTCCTCCCTCCC 60.619 60.000 0.00 0.00 0.00 4.30
615 631 0.326143 GCTTCTTCTCCTCCCTCCCT 60.326 60.000 0.00 0.00 0.00 4.20
619 635 0.633921 CTTCTCCTCCCTCCCTCAGA 59.366 60.000 0.00 0.00 0.00 3.27
641 657 0.114560 TTCAGGTTCTCTCCCTCCGT 59.885 55.000 0.00 0.00 0.00 4.69
654 678 1.078848 CTCCGTCTTCCCCTGCTTG 60.079 63.158 0.00 0.00 0.00 4.01
656 680 2.750350 CGTCTTCCCCTGCTTGGT 59.250 61.111 0.00 0.00 0.00 3.67
690 769 2.639327 GCATTGCGGCAGGTCCTTT 61.639 57.895 1.67 0.00 0.00 3.11
711 790 2.287547 TGCTTTTGTTTCCTGCTTAGCG 60.288 45.455 0.00 0.00 0.00 4.26
718 797 2.656560 TTCCTGCTTAGCGTTCTCTC 57.343 50.000 0.00 0.00 0.00 3.20
719 798 1.840737 TCCTGCTTAGCGTTCTCTCT 58.159 50.000 0.00 0.00 0.00 3.10
724 803 1.592081 GCTTAGCGTTCTCTCTGCATG 59.408 52.381 0.00 0.00 0.00 4.06
729 809 1.392853 GCGTTCTCTCTGCATGTCTTG 59.607 52.381 0.00 0.00 0.00 3.02
931 1226 3.191371 GGTGTAGAGGGCAACAAGATTTG 59.809 47.826 0.00 0.00 39.74 2.32
999 1302 3.827302 ACAGGAGATTAATAGACGGCGAT 59.173 43.478 16.62 3.89 0.00 4.58
1008 1311 3.851976 ATAGACGGCGATATGAGGAAC 57.148 47.619 16.62 0.00 0.00 3.62
1038 1341 1.208052 TGCTGCAAGAGATACTGGACC 59.792 52.381 0.00 0.00 34.07 4.46
1060 1363 2.818130 TTTGCATGGAAAGGTCAAGC 57.182 45.000 8.47 0.00 0.00 4.01
1114 1417 2.315925 TAGCATGGTAAGCTCAGTGC 57.684 50.000 1.19 0.00 42.32 4.40
1150 1457 8.450578 TGATAACTGAATTGGTAGCAATAAGG 57.549 34.615 19.84 14.10 0.00 2.69
1167 1508 7.066766 AGCAATAAGGCATTTCTGAAACTAGAG 59.933 37.037 4.73 0.00 35.83 2.43
1259 1600 1.701847 AGCTGTCAGGAACCATCAAGT 59.298 47.619 1.14 0.00 0.00 3.16
1261 1602 2.227388 GCTGTCAGGAACCATCAAGTTG 59.773 50.000 1.14 0.00 0.00 3.16
1606 1970 0.741221 GCTCAGGCCACCGTAGAAAG 60.741 60.000 5.01 0.00 0.00 2.62
1679 2043 6.920569 AACTTTACCACTGACTTGTAACTG 57.079 37.500 0.00 0.00 0.00 3.16
1682 2046 6.882678 ACTTTACCACTGACTTGTAACTGTTT 59.117 34.615 0.00 0.00 0.00 2.83
1789 2171 3.740631 TGAGTCATCTGAATCCGATGG 57.259 47.619 13.38 0.00 38.28 3.51
1836 2218 5.435686 TGTGTTATCAGGGAAGTGCTATT 57.564 39.130 0.00 0.00 0.00 1.73
1889 2271 3.230976 ACTTGTCCAGGAAATTCAACCC 58.769 45.455 0.00 0.00 0.00 4.11
1904 2286 0.603065 AACCCGAAATGCCTTTGCTC 59.397 50.000 0.00 0.00 38.71 4.26
1986 2368 6.391227 AATCATACGAATTCCCCATGAAAC 57.609 37.500 12.62 0.00 36.33 2.78
1988 2370 5.445069 TCATACGAATTCCCCATGAAACAT 58.555 37.500 0.00 0.00 36.33 2.71
2134 2555 6.405731 GGTGCTTTACATTGGAAATCATGCTA 60.406 38.462 1.48 0.00 0.00 3.49
2136 2557 7.380602 GTGCTTTACATTGGAAATCATGCTATC 59.619 37.037 1.48 0.00 0.00 2.08
2138 2560 8.086522 GCTTTACATTGGAAATCATGCTATCAT 58.913 33.333 0.00 0.00 0.00 2.45
2191 2613 9.584008 AATGCTCATGATTAAAACTAGGATCAT 57.416 29.630 0.00 0.00 39.21 2.45
2352 2778 2.286872 GATGGAGGTCATTGCAGTCTG 58.713 52.381 0.00 0.00 35.97 3.51
2376 2802 1.606668 GATTGTGGCTTTGTCCGTGAA 59.393 47.619 0.00 0.00 0.00 3.18
2456 2882 5.362556 AGAACATTCAAAGTGATTGTCCG 57.637 39.130 6.32 0.00 39.27 4.79
2670 3109 3.055747 AGAAACCTTCTCTTCGGGTCATC 60.056 47.826 0.00 0.00 34.07 2.92
2672 3111 2.472029 ACCTTCTCTTCGGGTCATCAT 58.528 47.619 0.00 0.00 0.00 2.45
2766 3206 1.071471 ACGGAAGTGCAGGACAAGG 59.929 57.895 0.00 0.00 46.97 3.61
2868 3308 7.482428 GCGTCTCACTAGTAAGTCTAGAAAAAG 59.518 40.741 0.00 0.00 46.53 2.27
3005 3451 1.197721 GCAGCAGTAGTTGTCGCAAAT 59.802 47.619 0.00 0.00 0.00 2.32
3006 3452 2.350772 GCAGCAGTAGTTGTCGCAAATT 60.351 45.455 0.00 0.00 0.00 1.82
3007 3453 3.853307 GCAGCAGTAGTTGTCGCAAATTT 60.853 43.478 0.00 0.00 0.00 1.82
3008 3454 4.290155 CAGCAGTAGTTGTCGCAAATTTT 58.710 39.130 0.00 0.00 0.00 1.82
3009 3455 4.739716 CAGCAGTAGTTGTCGCAAATTTTT 59.260 37.500 0.00 0.00 0.00 1.94
3066 3514 5.767816 ACCAAGAGTTATGTTTCAACCAC 57.232 39.130 0.00 0.00 0.00 4.16
3079 3527 6.068010 TGTTTCAACCACTCATCCTTTGTAT 58.932 36.000 0.00 0.00 0.00 2.29
3080 3528 6.206634 TGTTTCAACCACTCATCCTTTGTATC 59.793 38.462 0.00 0.00 0.00 2.24
3081 3529 5.497464 TCAACCACTCATCCTTTGTATCA 57.503 39.130 0.00 0.00 0.00 2.15
3082 3530 5.875224 TCAACCACTCATCCTTTGTATCAA 58.125 37.500 0.00 0.00 0.00 2.57
3083 3531 5.939883 TCAACCACTCATCCTTTGTATCAAG 59.060 40.000 0.00 0.00 0.00 3.02
3084 3532 5.762179 ACCACTCATCCTTTGTATCAAGA 57.238 39.130 0.00 0.00 0.00 3.02
3085 3533 5.738909 ACCACTCATCCTTTGTATCAAGAG 58.261 41.667 0.00 0.00 0.00 2.85
3086 3534 5.485353 ACCACTCATCCTTTGTATCAAGAGA 59.515 40.000 0.00 0.00 0.00 3.10
3087 3535 6.013379 ACCACTCATCCTTTGTATCAAGAGAA 60.013 38.462 0.00 0.00 0.00 2.87
3088 3536 6.881065 CCACTCATCCTTTGTATCAAGAGAAA 59.119 38.462 0.00 0.00 0.00 2.52
3089 3537 7.555554 CCACTCATCCTTTGTATCAAGAGAAAT 59.444 37.037 0.00 0.00 0.00 2.17
3090 3538 8.954350 CACTCATCCTTTGTATCAAGAGAAATT 58.046 33.333 0.00 0.00 0.00 1.82
3091 3539 9.525826 ACTCATCCTTTGTATCAAGAGAAATTT 57.474 29.630 0.00 0.00 0.00 1.82
3175 3626 6.122964 ACTATTCCTCTACAAAATCCCAAGC 58.877 40.000 0.00 0.00 0.00 4.01
3198 3649 6.434028 AGCTTGGCTTTCATGTTATTCTAACA 59.566 34.615 2.49 2.49 33.89 2.41
3219 3670 7.734924 AACATGATCAATATTCTGCGTGTAT 57.265 32.000 0.00 0.00 0.00 2.29
3253 3704 1.738099 GCACGGAGTACACTGCCAG 60.738 63.158 0.00 0.00 41.61 4.85
3265 3716 0.320697 ACTGCCAGGTACCTTCGAAC 59.679 55.000 13.15 0.39 0.00 3.95
3266 3717 0.736325 CTGCCAGGTACCTTCGAACG 60.736 60.000 13.15 0.00 0.00 3.95
3278 3729 2.490993 TTCGAACGGGAGGCCGTAAC 62.491 60.000 0.00 0.00 46.11 2.50
3359 3810 0.181350 GTGCCCTGAGGATAAGTGGG 59.819 60.000 0.00 0.00 40.74 4.61
3380 3831 1.230324 GCTGGACTTCTTTTGCGAGT 58.770 50.000 0.00 0.00 0.00 4.18
3419 3870 0.537188 GGGACATCTGCCTCTTCGAA 59.463 55.000 0.00 0.00 0.00 3.71
3443 3894 3.640967 TGATGAAAAACAAGGGGGAACTG 59.359 43.478 0.00 0.00 0.00 3.16
3444 3895 3.390175 TGAAAAACAAGGGGGAACTGA 57.610 42.857 0.00 0.00 0.00 3.41
3445 3896 3.714144 TGAAAAACAAGGGGGAACTGAA 58.286 40.909 0.00 0.00 0.00 3.02
3446 3897 3.704061 TGAAAAACAAGGGGGAACTGAAG 59.296 43.478 0.00 0.00 0.00 3.02
3447 3898 1.704641 AAACAAGGGGGAACTGAAGC 58.295 50.000 0.00 0.00 0.00 3.86
3448 3899 0.555769 AACAAGGGGGAACTGAAGCA 59.444 50.000 0.00 0.00 0.00 3.91
3517 3984 1.247419 CCTCGACTCTCTGTGCTGGT 61.247 60.000 0.00 0.00 0.00 4.00
3543 4014 2.038426 TGTATATCCATGGGCTCGTTGG 59.962 50.000 13.02 0.00 0.00 3.77
3545 4016 1.796017 TATCCATGGGCTCGTTGGTA 58.204 50.000 13.02 0.00 0.00 3.25
3617 4089 7.052142 AGTATGGCCAACTACTGTAGTAATC 57.948 40.000 19.97 11.51 38.26 1.75
3703 4175 2.022527 AGTTTCTATGAGGAGGAGGCCT 60.023 50.000 3.86 3.86 42.17 5.19
3796 4268 4.252878 TCAACGCACATGAGAATGTACAT 58.747 39.130 1.41 1.41 32.74 2.29
3810 4282 6.357367 AGAATGTACATGAATTAGTGACCCC 58.643 40.000 9.63 0.00 0.00 4.95
3847 4319 0.393808 TTTAGTGGAAGATGGCGGGC 60.394 55.000 0.00 0.00 0.00 6.13
3920 4392 0.670239 GCACCGGAAATGCCTTTTGG 60.670 55.000 9.46 5.52 44.18 3.28
3925 4397 1.550072 CGGAAATGCCTTTTGGTGGAT 59.450 47.619 0.00 0.00 42.99 3.41
3926 4398 2.674747 CGGAAATGCCTTTTGGTGGATG 60.675 50.000 0.00 0.00 42.99 3.51
3941 4413 1.149174 GATGGGTGCATCGGTGGAT 59.851 57.895 0.00 0.00 0.00 3.41
3947 4428 2.494073 GGGTGCATCGGTGGATTAAAAA 59.506 45.455 0.00 0.00 0.00 1.94
4009 4493 7.514805 ACACACACAAATACACATATAACACG 58.485 34.615 0.00 0.00 0.00 4.49
4015 4499 9.261318 CACAAATACACATATAACACGTTCAAG 57.739 33.333 0.00 0.00 0.00 3.02
4047 4532 9.715123 TTTCATAACAATATGCTTTCATACGTG 57.285 29.630 0.00 0.00 39.04 4.49
4049 4534 9.271828 TCATAACAATATGCTTTCATACGTGAT 57.728 29.630 0.00 0.00 39.04 3.06
4050 4535 9.321590 CATAACAATATGCTTTCATACGTGATG 57.678 33.333 0.00 0.00 37.94 3.07
4051 4536 6.925610 ACAATATGCTTTCATACGTGATGT 57.074 33.333 0.00 0.00 37.94 3.06
4053 4538 8.076714 ACAATATGCTTTCATACGTGATGTAG 57.923 34.615 0.00 2.79 37.94 2.74
4054 4539 7.926018 ACAATATGCTTTCATACGTGATGTAGA 59.074 33.333 0.00 0.00 37.94 2.59
4055 4540 7.875316 ATATGCTTTCATACGTGATGTAGAC 57.125 36.000 0.00 0.29 37.94 2.59
4056 4541 5.066968 TGCTTTCATACGTGATGTAGACA 57.933 39.130 0.00 0.00 36.25 3.41
4059 4544 6.090763 TGCTTTCATACGTGATGTAGACAAAG 59.909 38.462 0.00 5.37 36.25 2.77
4061 4546 7.148639 GCTTTCATACGTGATGTAGACAAAGAA 60.149 37.037 0.00 0.00 36.25 2.52
4062 4547 8.596271 TTTCATACGTGATGTAGACAAAGAAA 57.404 30.769 0.00 0.00 36.25 2.52
4063 4548 8.596271 TTCATACGTGATGTAGACAAAGAAAA 57.404 30.769 0.00 0.00 36.25 2.29
4064 4549 8.596271 TCATACGTGATGTAGACAAAGAAAAA 57.404 30.769 0.00 0.00 36.25 1.94
4065 4550 9.214957 TCATACGTGATGTAGACAAAGAAAAAT 57.785 29.630 0.00 0.00 36.25 1.82
4068 4553 8.373048 ACGTGATGTAGACAAAGAAAAATACA 57.627 30.769 0.00 0.00 0.00 2.29
4069 4554 8.832521 ACGTGATGTAGACAAAGAAAAATACAA 58.167 29.630 0.00 0.00 0.00 2.41
4070 4555 9.658475 CGTGATGTAGACAAAGAAAAATACAAA 57.342 29.630 0.00 0.00 0.00 2.83
4083 4568 9.964303 AAGAAAAATACAAAAATGAAAATGGGC 57.036 25.926 0.00 0.00 0.00 5.36
4084 4569 8.575589 AGAAAAATACAAAAATGAAAATGGGCC 58.424 29.630 0.00 0.00 0.00 5.80
4085 4570 7.830099 AAAATACAAAAATGAAAATGGGCCA 57.170 28.000 9.61 9.61 0.00 5.36
4086 4571 7.830099 AAATACAAAAATGAAAATGGGCCAA 57.170 28.000 11.89 0.00 0.00 4.52
4087 4572 8.419922 AAATACAAAAATGAAAATGGGCCAAT 57.580 26.923 11.89 0.00 0.00 3.16
4088 4573 5.963176 ACAAAAATGAAAATGGGCCAATC 57.037 34.783 11.89 10.45 0.00 2.67
4089 4574 5.633117 ACAAAAATGAAAATGGGCCAATCT 58.367 33.333 11.89 0.00 0.00 2.40
4090 4575 6.069994 ACAAAAATGAAAATGGGCCAATCTT 58.930 32.000 11.89 3.72 0.00 2.40
4091 4576 6.550481 ACAAAAATGAAAATGGGCCAATCTTT 59.450 30.769 11.89 10.92 0.00 2.52
4092 4577 7.069702 ACAAAAATGAAAATGGGCCAATCTTTT 59.930 29.630 11.89 13.53 0.00 2.27
4093 4578 7.600231 AAAATGAAAATGGGCCAATCTTTTT 57.400 28.000 23.31 23.31 0.00 1.94
4113 4598 2.926778 TTTGTTGGGCTGGGATTTTG 57.073 45.000 0.00 0.00 0.00 2.44
4114 4599 1.799933 TTGTTGGGCTGGGATTTTGT 58.200 45.000 0.00 0.00 0.00 2.83
4115 4600 1.799933 TGTTGGGCTGGGATTTTGTT 58.200 45.000 0.00 0.00 0.00 2.83
4116 4601 2.122768 TGTTGGGCTGGGATTTTGTTT 58.877 42.857 0.00 0.00 0.00 2.83
4117 4602 2.507471 TGTTGGGCTGGGATTTTGTTTT 59.493 40.909 0.00 0.00 0.00 2.43
4118 4603 3.138304 GTTGGGCTGGGATTTTGTTTTC 58.862 45.455 0.00 0.00 0.00 2.29
4128 4613 4.260743 GGGATTTTGTTTTCTTTGTGCAGC 60.261 41.667 0.00 0.00 0.00 5.25
4197 4682 7.094075 TGTGAGTATGTATAAGTTCTCACCGTT 60.094 37.037 16.68 0.00 46.04 4.44
4242 4727 9.927668 AACTTGGAAATACGATTTTTGAATCAT 57.072 25.926 0.00 0.00 0.00 2.45
4283 4768 0.757561 CCCCCGTCCACCAAAAAGTT 60.758 55.000 0.00 0.00 0.00 2.66
4313 4798 4.213564 AGGAGCACTACCTTTCAATCTG 57.786 45.455 0.00 0.00 33.55 2.90
4320 4805 6.772716 AGCACTACCTTTCAATCTGAAAAAGA 59.227 34.615 3.62 0.00 44.69 2.52
4337 4822 3.885976 AAGATACTCTCCCTCCGATCA 57.114 47.619 0.00 0.00 0.00 2.92
4341 4826 4.342665 AGATACTCTCCCTCCGATCAAAAC 59.657 45.833 0.00 0.00 0.00 2.43
4345 4830 3.674997 TCTCCCTCCGATCAAAACAAAG 58.325 45.455 0.00 0.00 0.00 2.77
4360 4846 1.234821 CAAAGTGGCGTGGCTTTAGA 58.765 50.000 0.00 0.00 34.04 2.10
4366 4852 1.810151 TGGCGTGGCTTTAGATCAAAC 59.190 47.619 0.00 0.00 0.00 2.93
4426 4962 5.189342 ACTGGTAGTGTACTAGAGTAGCTGA 59.811 44.000 0.00 0.00 39.36 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.213926 AGCCCACCAGGATTCAGATTC 59.786 52.381 0.00 0.00 38.24 2.52
6 7 0.679002 CACAGCCCACCAGGATTCAG 60.679 60.000 0.00 0.00 38.24 3.02
7 8 1.133181 TCACAGCCCACCAGGATTCA 61.133 55.000 0.00 0.00 38.24 2.57
8 9 0.257039 ATCACAGCCCACCAGGATTC 59.743 55.000 0.00 0.00 38.24 2.52
9 10 1.595311 TATCACAGCCCACCAGGATT 58.405 50.000 0.00 0.00 38.24 3.01
10 11 1.825105 ATATCACAGCCCACCAGGAT 58.175 50.000 0.00 0.00 38.24 3.24
11 12 1.212688 CAATATCACAGCCCACCAGGA 59.787 52.381 0.00 0.00 38.24 3.86
12 13 1.212688 TCAATATCACAGCCCACCAGG 59.787 52.381 0.00 0.00 39.47 4.45
13 14 2.292267 GTCAATATCACAGCCCACCAG 58.708 52.381 0.00 0.00 0.00 4.00
14 15 1.406751 CGTCAATATCACAGCCCACCA 60.407 52.381 0.00 0.00 0.00 4.17
15 16 1.134521 TCGTCAATATCACAGCCCACC 60.135 52.381 0.00 0.00 0.00 4.61
16 17 2.205074 CTCGTCAATATCACAGCCCAC 58.795 52.381 0.00 0.00 0.00 4.61
17 18 1.473257 GCTCGTCAATATCACAGCCCA 60.473 52.381 0.00 0.00 0.00 5.36
18 19 1.221414 GCTCGTCAATATCACAGCCC 58.779 55.000 0.00 0.00 0.00 5.19
19 20 1.863454 CTGCTCGTCAATATCACAGCC 59.137 52.381 0.00 0.00 0.00 4.85
20 21 2.793790 CTCTGCTCGTCAATATCACAGC 59.206 50.000 0.00 0.00 0.00 4.40
21 22 2.793790 GCTCTGCTCGTCAATATCACAG 59.206 50.000 0.00 0.00 0.00 3.66
22 23 2.166254 TGCTCTGCTCGTCAATATCACA 59.834 45.455 0.00 0.00 0.00 3.58
23 24 2.814269 TGCTCTGCTCGTCAATATCAC 58.186 47.619 0.00 0.00 0.00 3.06
24 25 3.451526 CTTGCTCTGCTCGTCAATATCA 58.548 45.455 0.00 0.00 0.00 2.15
25 26 2.799412 CCTTGCTCTGCTCGTCAATATC 59.201 50.000 0.00 0.00 0.00 1.63
26 27 2.831333 CCTTGCTCTGCTCGTCAATAT 58.169 47.619 0.00 0.00 0.00 1.28
27 28 1.740380 GCCTTGCTCTGCTCGTCAATA 60.740 52.381 0.00 0.00 0.00 1.90
28 29 1.023513 GCCTTGCTCTGCTCGTCAAT 61.024 55.000 0.00 0.00 0.00 2.57
29 30 1.669115 GCCTTGCTCTGCTCGTCAA 60.669 57.895 0.00 0.00 0.00 3.18
30 31 2.047844 GCCTTGCTCTGCTCGTCA 60.048 61.111 0.00 0.00 0.00 4.35
31 32 1.427592 GATGCCTTGCTCTGCTCGTC 61.428 60.000 0.00 0.00 0.00 4.20
32 33 1.449246 GATGCCTTGCTCTGCTCGT 60.449 57.895 0.00 0.00 0.00 4.18
33 34 2.178890 GGATGCCTTGCTCTGCTCG 61.179 63.158 0.00 0.00 0.00 5.03
34 35 1.077930 TGGATGCCTTGCTCTGCTC 60.078 57.895 0.00 0.00 0.00 4.26
35 36 1.378250 GTGGATGCCTTGCTCTGCT 60.378 57.895 0.00 0.00 0.00 4.24
36 37 2.413142 GGTGGATGCCTTGCTCTGC 61.413 63.158 0.00 0.00 0.00 4.26
37 38 0.747283 GAGGTGGATGCCTTGCTCTG 60.747 60.000 0.00 0.00 39.34 3.35
38 39 1.606531 GAGGTGGATGCCTTGCTCT 59.393 57.895 0.00 0.00 39.34 4.09
39 40 1.452833 GGAGGTGGATGCCTTGCTC 60.453 63.158 0.00 0.00 39.34 4.26
40 41 2.679716 GGAGGTGGATGCCTTGCT 59.320 61.111 0.00 0.00 39.34 3.91
41 42 2.825836 CGGAGGTGGATGCCTTGC 60.826 66.667 0.00 0.00 39.34 4.01
60 61 0.735471 GAAAAAGAGATGGCCGGAGC 59.265 55.000 5.05 0.00 38.76 4.70
61 62 1.009829 CGAAAAAGAGATGGCCGGAG 58.990 55.000 5.05 0.00 0.00 4.63
62 63 0.323629 ACGAAAAAGAGATGGCCGGA 59.676 50.000 5.05 0.00 0.00 5.14
63 64 0.727398 GACGAAAAAGAGATGGCCGG 59.273 55.000 0.00 0.00 0.00 6.13
64 65 0.370273 CGACGAAAAAGAGATGGCCG 59.630 55.000 0.00 0.00 0.00 6.13
65 66 0.727398 CCGACGAAAAAGAGATGGCC 59.273 55.000 0.00 0.00 0.00 5.36
66 67 0.097150 GCCGACGAAAAAGAGATGGC 59.903 55.000 0.00 0.00 0.00 4.40
67 68 1.394917 CAGCCGACGAAAAAGAGATGG 59.605 52.381 0.00 0.00 0.00 3.51
68 69 1.394917 CCAGCCGACGAAAAAGAGATG 59.605 52.381 0.00 0.00 0.00 2.90
69 70 1.726853 CCAGCCGACGAAAAAGAGAT 58.273 50.000 0.00 0.00 0.00 2.75
70 71 0.949105 GCCAGCCGACGAAAAAGAGA 60.949 55.000 0.00 0.00 0.00 3.10
71 72 1.497722 GCCAGCCGACGAAAAAGAG 59.502 57.895 0.00 0.00 0.00 2.85
72 73 2.314647 CGCCAGCCGACGAAAAAGA 61.315 57.895 0.00 0.00 40.02 2.52
73 74 2.173382 CGCCAGCCGACGAAAAAG 59.827 61.111 0.00 0.00 40.02 2.27
74 75 4.020378 GCGCCAGCCGACGAAAAA 62.020 61.111 0.00 0.00 40.02 1.94
90 91 1.868251 CGAAGAGTACGCAGACGGC 60.868 63.158 0.00 0.00 46.04 5.68
91 92 4.361827 CGAAGAGTACGCAGACGG 57.638 61.111 0.00 0.00 46.04 4.79
98 99 0.788391 AAAAAGGCGCGAAGAGTACG 59.212 50.000 12.10 0.00 0.00 3.67
99 100 2.067013 AGAAAAAGGCGCGAAGAGTAC 58.933 47.619 12.10 0.00 0.00 2.73
100 101 2.066262 CAGAAAAAGGCGCGAAGAGTA 58.934 47.619 12.10 0.00 0.00 2.59
101 102 0.868406 CAGAAAAAGGCGCGAAGAGT 59.132 50.000 12.10 0.00 0.00 3.24
102 103 0.868406 ACAGAAAAAGGCGCGAAGAG 59.132 50.000 12.10 0.00 0.00 2.85
103 104 0.865769 GACAGAAAAAGGCGCGAAGA 59.134 50.000 12.10 0.00 0.00 2.87
104 105 0.868406 AGACAGAAAAAGGCGCGAAG 59.132 50.000 12.10 0.00 0.00 3.79
105 106 0.865769 GAGACAGAAAAAGGCGCGAA 59.134 50.000 12.10 0.00 0.00 4.70
106 107 0.949105 GGAGACAGAAAAAGGCGCGA 60.949 55.000 12.10 0.00 0.00 5.87
107 108 0.951040 AGGAGACAGAAAAAGGCGCG 60.951 55.000 0.00 0.00 0.00 6.86
108 109 0.799393 GAGGAGACAGAAAAAGGCGC 59.201 55.000 0.00 0.00 0.00 6.53
109 110 1.071605 CGAGGAGACAGAAAAAGGCG 58.928 55.000 0.00 0.00 0.00 5.52
110 111 0.799393 GCGAGGAGACAGAAAAAGGC 59.201 55.000 0.00 0.00 0.00 4.35
111 112 1.071605 CGCGAGGAGACAGAAAAAGG 58.928 55.000 0.00 0.00 0.00 3.11
112 113 0.440371 GCGCGAGGAGACAGAAAAAG 59.560 55.000 12.10 0.00 0.00 2.27
113 114 0.949105 GGCGCGAGGAGACAGAAAAA 60.949 55.000 12.10 0.00 0.00 1.94
114 115 1.374252 GGCGCGAGGAGACAGAAAA 60.374 57.895 12.10 0.00 0.00 2.29
115 116 2.261671 GGCGCGAGGAGACAGAAA 59.738 61.111 12.10 0.00 0.00 2.52
116 117 3.760035 GGGCGCGAGGAGACAGAA 61.760 66.667 12.10 0.00 0.00 3.02
117 118 4.742649 AGGGCGCGAGGAGACAGA 62.743 66.667 12.10 0.00 0.00 3.41
118 119 2.788191 AAAAGGGCGCGAGGAGACAG 62.788 60.000 12.10 0.00 0.00 3.51
119 120 2.781595 GAAAAGGGCGCGAGGAGACA 62.782 60.000 12.10 0.00 0.00 3.41
120 121 2.047179 AAAAGGGCGCGAGGAGAC 60.047 61.111 12.10 0.00 0.00 3.36
121 122 2.264794 GAAAAGGGCGCGAGGAGA 59.735 61.111 12.10 0.00 0.00 3.71
122 123 2.820037 GGAAAAGGGCGCGAGGAG 60.820 66.667 12.10 0.00 0.00 3.69
123 124 4.404098 GGGAAAAGGGCGCGAGGA 62.404 66.667 12.10 0.00 0.00 3.71
131 132 4.029809 AGGCGACGGGGAAAAGGG 62.030 66.667 0.00 0.00 0.00 3.95
132 133 2.746277 CAGGCGACGGGGAAAAGG 60.746 66.667 0.00 0.00 0.00 3.11
133 134 3.431725 GCAGGCGACGGGGAAAAG 61.432 66.667 0.00 0.00 0.00 2.27
145 146 4.847444 GAAGCGAGGGAGGCAGGC 62.847 72.222 0.00 0.00 0.00 4.85
146 147 4.521062 CGAAGCGAGGGAGGCAGG 62.521 72.222 0.00 0.00 0.00 4.85
147 148 2.343163 CTACGAAGCGAGGGAGGCAG 62.343 65.000 0.00 0.00 0.00 4.85
148 149 2.361992 TACGAAGCGAGGGAGGCA 60.362 61.111 0.00 0.00 0.00 4.75
149 150 2.413765 CTACGAAGCGAGGGAGGC 59.586 66.667 0.00 0.00 0.00 4.70
150 151 1.433879 CACTACGAAGCGAGGGAGG 59.566 63.158 0.00 0.00 0.00 4.30
151 152 1.433879 CCACTACGAAGCGAGGGAG 59.566 63.158 0.00 0.00 0.00 4.30
152 153 2.050350 CCCACTACGAAGCGAGGGA 61.050 63.158 0.00 0.00 38.60 4.20
153 154 2.494918 CCCACTACGAAGCGAGGG 59.505 66.667 0.00 0.00 0.00 4.30
154 155 2.202756 GCCCACTACGAAGCGAGG 60.203 66.667 0.00 0.00 0.00 4.63
155 156 2.202756 GGCCCACTACGAAGCGAG 60.203 66.667 0.00 0.00 0.00 5.03
156 157 4.124351 CGGCCCACTACGAAGCGA 62.124 66.667 0.00 0.00 0.00 4.93
158 159 4.452733 AGCGGCCCACTACGAAGC 62.453 66.667 0.00 0.00 0.00 3.86
159 160 2.202756 GAGCGGCCCACTACGAAG 60.203 66.667 0.00 0.00 0.00 3.79
160 161 4.124351 CGAGCGGCCCACTACGAA 62.124 66.667 0.00 0.00 0.00 3.85
162 163 3.927163 AAACGAGCGGCCCACTACG 62.927 63.158 0.00 4.14 0.00 3.51
163 164 1.232621 AAAAACGAGCGGCCCACTAC 61.233 55.000 0.00 0.00 0.00 2.73
164 165 1.071814 AAAAACGAGCGGCCCACTA 59.928 52.632 0.00 0.00 0.00 2.74
165 166 2.203294 AAAAACGAGCGGCCCACT 60.203 55.556 0.00 0.00 0.00 4.00
166 167 2.050442 CAAAAACGAGCGGCCCAC 60.050 61.111 0.00 0.00 0.00 4.61
167 168 2.517402 ACAAAAACGAGCGGCCCA 60.517 55.556 0.00 0.00 0.00 5.36
168 169 2.050442 CACAAAAACGAGCGGCCC 60.050 61.111 0.00 0.00 0.00 5.80
169 170 2.729491 GCACAAAAACGAGCGGCC 60.729 61.111 0.00 0.00 0.00 6.13
170 171 2.010817 CAGCACAAAAACGAGCGGC 61.011 57.895 0.00 0.00 0.00 6.53
171 172 0.238289 ATCAGCACAAAAACGAGCGG 59.762 50.000 0.00 0.00 0.00 5.52
172 173 1.195448 AGATCAGCACAAAAACGAGCG 59.805 47.619 0.00 0.00 0.00 5.03
173 174 2.224079 TCAGATCAGCACAAAAACGAGC 59.776 45.455 0.00 0.00 0.00 5.03
174 175 3.666374 GCTCAGATCAGCACAAAAACGAG 60.666 47.826 0.00 0.00 39.43 4.18
175 176 2.224079 GCTCAGATCAGCACAAAAACGA 59.776 45.455 0.00 0.00 39.43 3.85
176 177 2.578495 GCTCAGATCAGCACAAAAACG 58.422 47.619 0.00 0.00 39.43 3.60
177 178 2.224079 TCGCTCAGATCAGCACAAAAAC 59.776 45.455 5.93 0.00 39.62 2.43
178 179 2.493035 TCGCTCAGATCAGCACAAAAA 58.507 42.857 5.93 0.00 39.62 1.94
179 180 2.168326 TCGCTCAGATCAGCACAAAA 57.832 45.000 5.93 0.00 39.62 2.44
180 181 1.800586 GTTCGCTCAGATCAGCACAAA 59.199 47.619 5.93 0.00 39.62 2.83
181 182 1.432514 GTTCGCTCAGATCAGCACAA 58.567 50.000 5.93 0.00 39.62 3.33
182 183 0.390340 GGTTCGCTCAGATCAGCACA 60.390 55.000 5.93 0.00 39.62 4.57
183 184 0.390340 TGGTTCGCTCAGATCAGCAC 60.390 55.000 5.93 0.00 39.62 4.40
184 185 0.108472 CTGGTTCGCTCAGATCAGCA 60.108 55.000 5.93 0.00 39.62 4.41
185 186 0.174389 TCTGGTTCGCTCAGATCAGC 59.826 55.000 0.00 0.00 36.46 4.26
186 187 1.747924 TCTCTGGTTCGCTCAGATCAG 59.252 52.381 0.00 0.00 40.07 2.90
187 188 1.747924 CTCTCTGGTTCGCTCAGATCA 59.252 52.381 0.00 0.00 40.07 2.92
188 189 1.535860 GCTCTCTGGTTCGCTCAGATC 60.536 57.143 0.00 0.00 40.07 2.75
189 190 0.459489 GCTCTCTGGTTCGCTCAGAT 59.541 55.000 0.00 0.00 40.07 2.90
190 191 0.610509 AGCTCTCTGGTTCGCTCAGA 60.611 55.000 0.00 0.00 38.75 3.27
191 192 0.458197 CAGCTCTCTGGTTCGCTCAG 60.458 60.000 0.00 0.00 36.68 3.35
192 193 1.588597 CAGCTCTCTGGTTCGCTCA 59.411 57.895 0.00 0.00 36.68 4.26
193 194 1.809209 GCAGCTCTCTGGTTCGCTC 60.809 63.158 0.00 0.00 40.65 5.03
194 195 2.264166 GCAGCTCTCTGGTTCGCT 59.736 61.111 0.00 0.00 40.65 4.93
195 196 2.817396 GGCAGCTCTCTGGTTCGC 60.817 66.667 0.00 0.00 40.65 4.70
196 197 2.507992 CGGCAGCTCTCTGGTTCG 60.508 66.667 0.00 0.00 40.65 3.95
197 198 1.446966 GACGGCAGCTCTCTGGTTC 60.447 63.158 0.00 0.00 40.65 3.62
198 199 1.910772 AGACGGCAGCTCTCTGGTT 60.911 57.895 0.00 0.00 40.65 3.67
199 200 2.283532 AGACGGCAGCTCTCTGGT 60.284 61.111 0.00 0.00 40.65 4.00
200 201 1.674764 ATCAGACGGCAGCTCTCTGG 61.675 60.000 15.82 3.12 40.65 3.86
201 202 0.528033 CATCAGACGGCAGCTCTCTG 60.528 60.000 11.69 11.69 43.16 3.35
202 203 1.674764 CCATCAGACGGCAGCTCTCT 61.675 60.000 0.00 0.00 0.00 3.10
203 204 1.227205 CCATCAGACGGCAGCTCTC 60.227 63.158 0.00 0.00 0.00 3.20
204 205 1.548357 AACCATCAGACGGCAGCTCT 61.548 55.000 0.00 0.00 0.00 4.09
205 206 1.078848 AACCATCAGACGGCAGCTC 60.079 57.895 0.00 0.00 0.00 4.09
206 207 1.376424 CAACCATCAGACGGCAGCT 60.376 57.895 0.00 0.00 0.00 4.24
207 208 0.745845 ATCAACCATCAGACGGCAGC 60.746 55.000 0.00 0.00 0.00 5.25
208 209 1.012086 CATCAACCATCAGACGGCAG 58.988 55.000 0.00 0.00 0.00 4.85
209 210 0.392863 CCATCAACCATCAGACGGCA 60.393 55.000 0.00 0.00 0.00 5.69
210 211 0.107703 TCCATCAACCATCAGACGGC 60.108 55.000 0.00 0.00 0.00 5.68
211 212 1.656652 GTCCATCAACCATCAGACGG 58.343 55.000 0.00 0.00 0.00 4.79
212 213 1.280982 CGTCCATCAACCATCAGACG 58.719 55.000 0.00 0.00 40.76 4.18
213 214 1.066143 ACCGTCCATCAACCATCAGAC 60.066 52.381 0.00 0.00 0.00 3.51
214 215 1.066215 CACCGTCCATCAACCATCAGA 60.066 52.381 0.00 0.00 0.00 3.27
215 216 1.372582 CACCGTCCATCAACCATCAG 58.627 55.000 0.00 0.00 0.00 2.90
216 217 0.676466 GCACCGTCCATCAACCATCA 60.676 55.000 0.00 0.00 0.00 3.07
217 218 1.376609 GGCACCGTCCATCAACCATC 61.377 60.000 0.00 0.00 0.00 3.51
218 219 1.378514 GGCACCGTCCATCAACCAT 60.379 57.895 0.00 0.00 0.00 3.55
219 220 2.033448 GGCACCGTCCATCAACCA 59.967 61.111 0.00 0.00 0.00 3.67
220 221 1.175983 TTTGGCACCGTCCATCAACC 61.176 55.000 0.00 0.00 35.77 3.77
221 222 0.039527 GTTTGGCACCGTCCATCAAC 60.040 55.000 0.00 0.00 35.77 3.18
222 223 1.511318 CGTTTGGCACCGTCCATCAA 61.511 55.000 0.00 0.00 35.77 2.57
223 224 1.963855 CGTTTGGCACCGTCCATCA 60.964 57.895 0.00 0.00 35.77 3.07
224 225 1.231958 TTCGTTTGGCACCGTCCATC 61.232 55.000 5.75 0.00 35.77 3.51
225 226 1.228003 TTCGTTTGGCACCGTCCAT 60.228 52.632 5.75 0.00 35.77 3.41
226 227 1.890041 CTTCGTTTGGCACCGTCCA 60.890 57.895 5.75 0.00 0.00 4.02
227 228 2.613506 CCTTCGTTTGGCACCGTCC 61.614 63.158 5.75 0.00 0.00 4.79
228 229 1.595929 TCCTTCGTTTGGCACCGTC 60.596 57.895 5.75 0.00 0.00 4.79
229 230 1.890510 GTCCTTCGTTTGGCACCGT 60.891 57.895 5.75 0.00 0.00 4.83
230 231 2.943653 GTCCTTCGTTTGGCACCG 59.056 61.111 0.00 0.00 0.00 4.94
231 232 2.943653 CGTCCTTCGTTTGGCACC 59.056 61.111 0.00 0.00 34.52 5.01
248 249 3.425027 TGGGATTCCAAGTCAGAGGGAC 61.425 54.545 4.80 0.00 41.70 4.46
249 250 1.203428 TGGGATTCCAAGTCAGAGGGA 60.203 52.381 4.80 0.00 40.73 4.20
250 251 1.289160 TGGGATTCCAAGTCAGAGGG 58.711 55.000 4.80 0.00 40.73 4.30
260 261 0.613260 CCTCTGACGTTGGGATTCCA 59.387 55.000 4.80 0.00 42.25 3.53
261 262 0.902531 TCCTCTGACGTTGGGATTCC 59.097 55.000 0.00 0.00 0.00 3.01
262 263 2.432510 AGATCCTCTGACGTTGGGATTC 59.567 50.000 11.72 7.27 38.52 2.52
263 264 2.432510 GAGATCCTCTGACGTTGGGATT 59.567 50.000 11.72 5.07 38.52 3.01
264 265 2.035632 GAGATCCTCTGACGTTGGGAT 58.964 52.381 10.71 10.71 40.77 3.85
265 266 1.475403 GAGATCCTCTGACGTTGGGA 58.525 55.000 0.00 0.00 0.00 4.37
266 267 0.101399 CGAGATCCTCTGACGTTGGG 59.899 60.000 0.00 0.00 0.00 4.12
267 268 0.811915 ACGAGATCCTCTGACGTTGG 59.188 55.000 0.00 0.00 33.48 3.77
268 269 2.520979 GAACGAGATCCTCTGACGTTG 58.479 52.381 0.00 0.00 44.86 4.10
269 270 1.473278 GGAACGAGATCCTCTGACGTT 59.527 52.381 0.00 0.00 46.86 3.99
270 271 1.096416 GGAACGAGATCCTCTGACGT 58.904 55.000 0.00 0.00 36.50 4.34
271 272 3.928343 GGAACGAGATCCTCTGACG 57.072 57.895 0.00 0.00 36.50 4.35
289 290 0.179076 GTAATGGTACCGGGGGAACG 60.179 60.000 6.32 0.00 0.00 3.95
290 291 1.206878 AGTAATGGTACCGGGGGAAC 58.793 55.000 6.32 0.00 0.00 3.62
291 292 1.560611 CAAGTAATGGTACCGGGGGAA 59.439 52.381 6.32 0.00 0.00 3.97
292 293 1.205966 CAAGTAATGGTACCGGGGGA 58.794 55.000 6.32 0.00 0.00 4.81
293 294 0.181824 CCAAGTAATGGTACCGGGGG 59.818 60.000 6.32 0.00 44.85 5.40
294 295 3.792712 CCAAGTAATGGTACCGGGG 57.207 57.895 6.32 0.00 44.85 5.73
303 304 3.612860 CCTCTCGTTTCGTCCAAGTAATG 59.387 47.826 0.00 0.00 0.00 1.90
304 305 3.368116 CCCTCTCGTTTCGTCCAAGTAAT 60.368 47.826 0.00 0.00 0.00 1.89
305 306 2.029649 CCCTCTCGTTTCGTCCAAGTAA 60.030 50.000 0.00 0.00 0.00 2.24
306 307 1.542915 CCCTCTCGTTTCGTCCAAGTA 59.457 52.381 0.00 0.00 0.00 2.24
307 308 0.317479 CCCTCTCGTTTCGTCCAAGT 59.683 55.000 0.00 0.00 0.00 3.16
308 309 0.317479 ACCCTCTCGTTTCGTCCAAG 59.683 55.000 0.00 0.00 0.00 3.61
309 310 0.316204 GACCCTCTCGTTTCGTCCAA 59.684 55.000 0.00 0.00 0.00 3.53
310 311 1.859427 CGACCCTCTCGTTTCGTCCA 61.859 60.000 0.00 0.00 37.64 4.02
311 312 1.154073 CGACCCTCTCGTTTCGTCC 60.154 63.158 0.00 0.00 37.64 4.79
312 313 1.800713 GCGACCCTCTCGTTTCGTC 60.801 63.158 0.00 0.00 44.92 4.20
313 314 1.874345 ATGCGACCCTCTCGTTTCGT 61.874 55.000 0.00 0.00 44.92 3.85
314 315 1.153823 ATGCGACCCTCTCGTTTCG 60.154 57.895 0.00 0.00 44.92 3.46
315 316 1.696832 GCATGCGACCCTCTCGTTTC 61.697 60.000 0.00 0.00 44.92 2.78
316 317 1.741770 GCATGCGACCCTCTCGTTT 60.742 57.895 0.00 0.00 44.92 3.60
317 318 2.125512 GCATGCGACCCTCTCGTT 60.126 61.111 0.00 0.00 44.92 3.85
318 319 2.842394 CTTGCATGCGACCCTCTCGT 62.842 60.000 14.09 0.00 44.92 4.18
319 320 2.125552 TTGCATGCGACCCTCTCG 60.126 61.111 14.09 0.00 45.97 4.04
320 321 2.467826 GCTTGCATGCGACCCTCTC 61.468 63.158 14.09 0.00 0.00 3.20
321 322 2.437359 GCTTGCATGCGACCCTCT 60.437 61.111 14.09 0.00 0.00 3.69
329 330 2.331194 ACTTTTTGATCGCTTGCATGC 58.669 42.857 11.82 11.82 0.00 4.06
330 331 3.539563 CGTACTTTTTGATCGCTTGCATG 59.460 43.478 0.00 0.00 0.00 4.06
331 332 3.188460 ACGTACTTTTTGATCGCTTGCAT 59.812 39.130 0.00 0.00 0.00 3.96
332 333 2.546368 ACGTACTTTTTGATCGCTTGCA 59.454 40.909 0.00 0.00 0.00 4.08
333 334 2.902484 CACGTACTTTTTGATCGCTTGC 59.098 45.455 0.00 0.00 0.00 4.01
334 335 2.902484 GCACGTACTTTTTGATCGCTTG 59.098 45.455 0.00 0.00 0.00 4.01
335 336 2.095919 GGCACGTACTTTTTGATCGCTT 60.096 45.455 0.00 0.00 0.00 4.68
336 337 1.463444 GGCACGTACTTTTTGATCGCT 59.537 47.619 0.00 0.00 0.00 4.93
337 338 1.463444 AGGCACGTACTTTTTGATCGC 59.537 47.619 0.00 0.00 0.00 4.58
338 339 2.222508 CGAGGCACGTACTTTTTGATCG 60.223 50.000 0.00 0.00 37.22 3.69
339 340 3.369835 CGAGGCACGTACTTTTTGATC 57.630 47.619 0.00 0.00 37.22 2.92
354 355 1.143969 CGGTTCGGTGATTACGAGGC 61.144 60.000 0.00 0.00 41.81 4.70
409 411 1.219393 CTTGGAGAAGCGGGAGGTC 59.781 63.158 0.00 0.00 41.46 3.85
461 464 1.076533 GGCACTGTATCACACGGACG 61.077 60.000 0.00 0.00 36.95 4.79
462 465 0.246635 AGGCACTGTATCACACGGAC 59.753 55.000 0.00 0.00 37.18 4.79
463 466 2.666085 AGGCACTGTATCACACGGA 58.334 52.632 0.00 0.00 37.18 4.69
491 494 5.929415 CGTCTCTGCTACTCTGATATGAGTA 59.071 44.000 4.62 4.62 44.53 2.59
496 499 4.041075 TCCTCGTCTCTGCTACTCTGATAT 59.959 45.833 0.00 0.00 0.00 1.63
529 545 1.142465 AGCTGTAGGATGCCCTGATTG 59.858 52.381 0.00 0.00 44.15 2.67
559 575 0.892814 TCAAATGGATGTGTGCGGCA 60.893 50.000 0.00 0.00 0.00 5.69
611 627 2.900546 GAGAACCTGAACTTCTGAGGGA 59.099 50.000 0.00 0.00 0.00 4.20
612 628 2.903135 AGAGAACCTGAACTTCTGAGGG 59.097 50.000 0.00 0.00 0.00 4.30
613 629 3.056179 GGAGAGAACCTGAACTTCTGAGG 60.056 52.174 0.00 0.00 0.00 3.86
614 630 3.056179 GGGAGAGAACCTGAACTTCTGAG 60.056 52.174 0.00 0.00 0.00 3.35
615 631 2.900546 GGGAGAGAACCTGAACTTCTGA 59.099 50.000 0.00 0.00 0.00 3.27
619 635 2.261729 GGAGGGAGAGAACCTGAACTT 58.738 52.381 0.00 0.00 38.79 2.66
641 657 1.480498 GGAAAACCAAGCAGGGGAAGA 60.480 52.381 0.04 0.00 43.89 2.87
690 769 2.287547 CGCTAAGCAGGAAACAAAAGCA 60.288 45.455 0.00 0.00 0.00 3.91
724 803 5.865552 AGCAAAATGAACATGTATGCAAGAC 59.134 36.000 0.00 0.00 34.89 3.01
729 809 6.956299 AAGAAGCAAAATGAACATGTATGC 57.044 33.333 0.00 3.81 0.00 3.14
941 1242 1.063174 GATCGTGAAAGATGGCACTGC 59.937 52.381 0.00 0.00 32.98 4.40
983 1286 6.132791 TCCTCATATCGCCGTCTATTAATC 57.867 41.667 0.00 0.00 0.00 1.75
992 1295 0.674534 GGAGTTCCTCATATCGCCGT 59.325 55.000 0.00 0.00 31.08 5.68
1008 1311 0.034476 TCTTGCAGCACTCACAGGAG 59.966 55.000 0.00 0.00 46.96 3.69
1038 1341 3.592059 CTTGACCTTTCCATGCAAATGG 58.408 45.455 0.00 0.00 43.01 3.16
1060 1363 1.580893 CCATGCGCGTGATGAAACG 60.581 57.895 30.68 8.28 46.30 3.60
1066 1369 0.389025 TGTCTATCCATGCGCGTGAT 59.611 50.000 30.68 21.74 0.00 3.06
1073 1376 2.630098 TGCCTAGAGTGTCTATCCATGC 59.370 50.000 0.00 0.00 0.00 4.06
1114 1417 1.281867 TCAGTTATCAAGGCCACCCAG 59.718 52.381 5.01 0.00 0.00 4.45
1282 1623 4.207224 CGCTCAGTAATTCCAACATCGTAG 59.793 45.833 0.00 0.00 0.00 3.51
1606 1970 2.336554 TTGCATCTTTCTTTGCTCGC 57.663 45.000 0.00 0.00 39.60 5.03
1704 2068 5.720041 AGTAAGGGTAACTGCAGTAAGATGA 59.280 40.000 22.01 0.14 0.00 2.92
1789 2171 3.112709 GCGTTGGGAGCGTCTGAC 61.113 66.667 0.00 0.00 0.00 3.51
1836 2218 4.265904 TGGCGTCATCTTCTTCTGTTAA 57.734 40.909 0.00 0.00 0.00 2.01
1889 2271 0.454957 CCACGAGCAAAGGCATTTCG 60.455 55.000 2.42 2.42 44.61 3.46
1904 2286 1.506493 GCTTCCTCATCATAGCCACG 58.494 55.000 0.00 0.00 0.00 4.94
1967 2349 7.060421 ACTTATGTTTCATGGGGAATTCGTAT 58.940 34.615 0.00 0.00 34.91 3.06
1970 2352 5.835113 ACTTATGTTTCATGGGGAATTCG 57.165 39.130 0.00 0.00 34.91 3.34
1979 2361 8.677300 AGGCATACAGTTAACTTATGTTTCATG 58.323 33.333 23.66 15.14 37.59 3.07
2026 2410 8.832521 TCAAAACAGTAACGAATGACAAATACT 58.167 29.630 0.00 0.00 0.00 2.12
2027 2411 8.996988 TCAAAACAGTAACGAATGACAAATAC 57.003 30.769 0.00 0.00 0.00 1.89
2028 2412 9.658475 CTTCAAAACAGTAACGAATGACAAATA 57.342 29.630 0.00 0.00 0.00 1.40
2134 2555 7.815383 TGTAATAAAAGTGAGATCCCCATGAT 58.185 34.615 0.00 0.00 36.01 2.45
2136 2557 7.056635 ACTGTAATAAAAGTGAGATCCCCATG 58.943 38.462 0.00 0.00 0.00 3.66
2138 2560 6.636454 ACTGTAATAAAAGTGAGATCCCCA 57.364 37.500 0.00 0.00 0.00 4.96
2184 2606 4.159135 GGTGCAGAATGTGAAAATGATCCT 59.841 41.667 0.00 0.00 39.31 3.24
2191 2613 4.402155 ACAGAAAGGTGCAGAATGTGAAAA 59.598 37.500 0.00 0.00 39.31 2.29
2352 2778 2.747446 ACGGACAAAGCCACAATCATAC 59.253 45.455 0.00 0.00 0.00 2.39
2376 2802 7.995488 CACAGATCTCCCTCCAGTAAATTATTT 59.005 37.037 0.00 0.00 0.00 1.40
2670 3109 6.045318 ACTTCTCACTTATCCGATGTTCATG 58.955 40.000 0.00 0.00 0.00 3.07
2672 3111 5.661056 ACTTCTCACTTATCCGATGTTCA 57.339 39.130 0.00 0.00 0.00 3.18
2766 3206 4.023107 GGCTCCAACTTTCTCCAAAACTAC 60.023 45.833 0.00 0.00 0.00 2.73
2894 3337 9.428097 GACTGATTTTTCTGCAAAGGAAATTAT 57.572 29.630 0.96 0.00 33.51 1.28
3010 3456 8.325421 TCGGTAAAACTACTATGCATCAAAAA 57.675 30.769 0.19 0.00 0.00 1.94
3012 3458 7.908827 TTCGGTAAAACTACTATGCATCAAA 57.091 32.000 0.19 0.00 0.00 2.69
3013 3459 8.500753 AATTCGGTAAAACTACTATGCATCAA 57.499 30.769 0.19 0.00 0.00 2.57
3094 3542 9.586732 TCCAAATTTCTCTTGATTTTCCTCTAA 57.413 29.630 0.00 0.00 0.00 2.10
3095 3543 9.759473 ATCCAAATTTCTCTTGATTTTCCTCTA 57.241 29.630 0.00 0.00 0.00 2.43
3096 3544 8.661752 ATCCAAATTTCTCTTGATTTTCCTCT 57.338 30.769 0.00 0.00 0.00 3.69
3198 3649 9.657419 TCAATATACACGCAGAATATTGATCAT 57.343 29.630 14.25 0.00 42.97 2.45
3201 3652 8.831715 TGTCAATATACACGCAGAATATTGAT 57.168 30.769 18.24 0.00 46.35 2.57
3219 3670 2.422597 CGTGCCAAAGGTCTGTCAATA 58.577 47.619 0.00 0.00 0.00 1.90
3253 3704 1.514553 CCTCCCGTTCGAAGGTACC 59.485 63.158 16.01 2.73 0.00 3.34
3266 3717 1.376812 CACCAAGTTACGGCCTCCC 60.377 63.158 0.00 0.00 0.00 4.30
3278 3729 0.959372 CCTCCAGCTGAAGCACCAAG 60.959 60.000 17.39 0.00 45.16 3.61
3359 3810 0.889186 TCGCAAAAGAAGTCCAGCCC 60.889 55.000 0.00 0.00 0.00 5.19
3399 3850 1.227089 CGAAGAGGCAGATGTCCCG 60.227 63.158 0.00 0.00 0.00 5.14
3419 3870 3.611025 TCCCCCTTGTTTTTCATCAGT 57.389 42.857 0.00 0.00 0.00 3.41
3443 3894 5.016051 TGTAGACCATCATCTTCTGCTTC 57.984 43.478 0.00 0.00 0.00 3.86
3444 3895 5.627182 ATGTAGACCATCATCTTCTGCTT 57.373 39.130 0.00 0.00 0.00 3.91
3468 3919 5.835257 TCAAGCAAACAATTCTCTGGAAAG 58.165 37.500 0.00 0.00 34.90 2.62
3517 3984 6.121776 ACGAGCCCATGGATATACAAAATA 57.878 37.500 15.22 0.00 0.00 1.40
3543 4014 6.385649 TCCACTTCCAAATCACAAAAGTAC 57.614 37.500 0.00 0.00 0.00 2.73
3545 4016 5.930837 TTCCACTTCCAAATCACAAAAGT 57.069 34.783 0.00 0.00 0.00 2.66
3617 4089 3.250280 GCTGCCACTGAAGTATGATGATG 59.750 47.826 0.00 0.00 0.00 3.07
3703 4175 6.203338 GGTATCACGTGTTCTTTAAACCTCAA 59.797 38.462 16.51 0.00 0.00 3.02
3796 4268 1.480954 GAGCTCGGGGTCACTAATTCA 59.519 52.381 10.21 0.00 39.51 2.57
3810 4282 5.290643 CACTAAATCCTTCTTCTTGAGCTCG 59.709 44.000 9.64 0.00 0.00 5.03
3847 4319 2.560542 TCCACCCATCCAAACGAATTTG 59.439 45.455 0.00 0.00 44.19 2.32
3885 4357 1.481363 GGTGCTCCTACTGGTTACTCC 59.519 57.143 0.00 0.00 34.23 3.85
3886 4358 1.134560 CGGTGCTCCTACTGGTTACTC 59.865 57.143 2.85 0.00 34.23 2.59
3920 4392 2.114670 CACCGATGCACCCATCCAC 61.115 63.158 0.00 0.00 44.00 4.02
3925 4397 0.621082 TTAATCCACCGATGCACCCA 59.379 50.000 0.00 0.00 0.00 4.51
3926 4398 1.757682 TTTAATCCACCGATGCACCC 58.242 50.000 0.00 0.00 0.00 4.61
3966 4447 9.862371 TGTGTGTGTACAAATTATTTTGACTTT 57.138 25.926 15.19 0.00 44.11 2.66
4023 4508 8.655651 TCACGTATGAAAGCATATTGTTATGA 57.344 30.769 0.00 0.00 39.09 2.15
4042 4527 9.478768 TGTATTTTTCTTTGTCTACATCACGTA 57.521 29.630 0.00 0.00 0.00 3.57
4044 4529 9.658475 TTTGTATTTTTCTTTGTCTACATCACG 57.342 29.630 0.00 0.00 0.00 4.35
4059 4544 8.355913 TGGCCCATTTTCATTTTTGTATTTTTC 58.644 29.630 0.00 0.00 0.00 2.29
4061 4546 7.830099 TGGCCCATTTTCATTTTTGTATTTT 57.170 28.000 0.00 0.00 0.00 1.82
4062 4547 7.830099 TTGGCCCATTTTCATTTTTGTATTT 57.170 28.000 0.00 0.00 0.00 1.40
4063 4548 7.889600 AGATTGGCCCATTTTCATTTTTGTATT 59.110 29.630 0.00 0.00 0.00 1.89
4064 4549 7.404481 AGATTGGCCCATTTTCATTTTTGTAT 58.596 30.769 0.00 0.00 0.00 2.29
4065 4550 6.777782 AGATTGGCCCATTTTCATTTTTGTA 58.222 32.000 0.00 0.00 0.00 2.41
4066 4551 5.633117 AGATTGGCCCATTTTCATTTTTGT 58.367 33.333 0.00 0.00 0.00 2.83
4067 4552 6.578163 AAGATTGGCCCATTTTCATTTTTG 57.422 33.333 0.00 0.00 0.00 2.44
4068 4553 7.600231 AAAAGATTGGCCCATTTTCATTTTT 57.400 28.000 0.00 0.00 0.00 1.94
4069 4554 7.600231 AAAAAGATTGGCCCATTTTCATTTT 57.400 28.000 0.00 0.00 0.00 1.82
4092 4577 3.054065 ACAAAATCCCAGCCCAACAAAAA 60.054 39.130 0.00 0.00 0.00 1.94
4093 4578 2.507471 ACAAAATCCCAGCCCAACAAAA 59.493 40.909 0.00 0.00 0.00 2.44
4094 4579 2.122768 ACAAAATCCCAGCCCAACAAA 58.877 42.857 0.00 0.00 0.00 2.83
4095 4580 1.799933 ACAAAATCCCAGCCCAACAA 58.200 45.000 0.00 0.00 0.00 2.83
4104 4589 4.836825 TGCACAAAGAAAACAAAATCCCA 58.163 34.783 0.00 0.00 0.00 4.37
4110 4595 3.124976 GCAAGCTGCACAAAGAAAACAAA 59.875 39.130 1.02 0.00 44.26 2.83
4162 4647 9.770097 AACTTATACATACTCACAATGGATCTG 57.230 33.333 0.00 0.00 30.41 2.90
4213 4698 9.981114 ATTCAAAAATCGTATTTCCAAGTTTCT 57.019 25.926 0.00 0.00 0.00 2.52
4252 4737 2.124570 CGGGGGCATTGACTCCTG 60.125 66.667 6.90 0.00 0.00 3.86
4258 4743 4.041762 GGTGGACGGGGGCATTGA 62.042 66.667 0.00 0.00 0.00 2.57
4320 4805 4.030913 TGTTTTGATCGGAGGGAGAGTAT 58.969 43.478 0.00 0.00 0.00 2.12
4337 4822 0.534873 AAGCCACGCCACTTTGTTTT 59.465 45.000 0.00 0.00 0.00 2.43
4341 4826 1.234821 TCTAAAGCCACGCCACTTTG 58.765 50.000 7.24 0.08 36.78 2.77
4345 4830 1.448985 TTGATCTAAAGCCACGCCAC 58.551 50.000 0.00 0.00 0.00 5.01
4378 4914 5.957771 ACTAGGGCTCTGACAAAATATCA 57.042 39.130 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.